Lsi07G011380.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACGGCGTCGTACGGGGAACATTATTCGAACAATTATTGGCAAATTTATTGGAGAGTGGTTAGCCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTTGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGAGACTCACTTTCTTCGGTATTTTCTTTCCTTTCATACGCTTCTGGTTTTTCTTTTTTTAATTTTCAATGTTTTTCGATGTCAAATTTGTAGTTTCTTCATCTTCATGCTCAAAGAAAATCCGATTTGTAGGGTTACATGTGATCAGATACTTGTTTTCCAAATTCTCCTGATTCTGAAATTTCAGTGTGTGTGTTTTTATGCTGTTTTATGCAAATTACTCTCTCGTTGCGGGAGCTTGATGTGTGATTGATTTTACTGCTGAAGAAATTCATACGGCTTTCTTCTTGTTCTTCCCGATCGGTGCATTTCTATTGAATTTTCTAGATTTTCTTTCCTGTGTTTCCTTAGTGATTTGAAAAGTTTAATTGGAGCATTAGGTGTTCAGGATCATCTCTCATTTGGGTGTAATAATATAGACTGTTTATTGGTCACCAGTTATAATTGTCAATTTCTCTTCGAATTTGCTGGACTCTGGTTGTAGAAGATTGACGGAGAATCATCTTTATGATGTGTTTTTTTTTTTGTTTTAACGAGTTTGATTCAGCACTAGCCTCCTTGTGAGGGTGGTTATACCTTGAAATTTAAAAGCATGTATTTCTAACATCTAATATCTTAGGAAGAGTAAACTACCTTTTGTTGGCCTTTTGGAATTGGGGCGTGTGAATTAAGTAAAGTGACTTTGGGGTAGGATCAAACTCCTTAAAGGGGAAGTTTAGTCTATGAATGCGATTGTTATCGTGTGAGATTAGTTGGGGTGCGTATAAGCTAGCTCGGATTATTCACAGTATAGAAAGCAAGTTGAAATATTGAAGAGAAACTATTATTCAAAATGAACTGATATCTTTACGGTGTTATCTTTTATAAAGTTCCCTCGTGCTTTGCTTTTGCTTTTTGTGTCTTAAAACATGGAAGTTGATAATTATTTATCCTAGAGGGCATCTGACCTTTCTACTTTCTATCCCCTTTTGTTTCTTAACCCTATGTTTTTGCAGGAAAACTCTTATTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTCCTTTTCGTTCTCCACCTTGAATATCACCTTCCCGGTAATTTCCATATCTGCTCTACCCTACGCATTTGCAAAATTGCAATGGCAGATCCGTTTTAGAAAAGTCAATATATTATTTTTGTATTTTCAGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGAACCAGCTTTGAGAAAATATCGTTAGAAGTGGAGACAGCTCCTCATTTCAACCCCTTGGCAGCAAAAGCTGCAACCATCAGTCTGTCAGGTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTCGTCACAGGTAGATGTGCATTCTTCTTAACCTTTAAACTTGGGATGCTAAGTTAGATAATCCGTACTACTTTTTCTAAGGGATGCCTACTTTAATGGAGACTGGATTTCAAAATTTAATATAATTTGGTCCAAAAAAATGTGATTGTCGTTGGCTTCTGTTGCTAGAAAAGAGCAAGAATTTGACAGGCATAAAAATCTTGAATCTAGCATTGTATTGAAGGAAAGCTAGAAAATGTGGGACTTGAACTTGTGAAAACATCACATGTGGAGAAGACAGTCTGATAATATGATGTTTGTAAGACTTTTACCCTGTCTGTTTCCTGAAGATTTGAAGGGATTTAAATCCTGATGAATCAAATGAGTATTTTCATTTGTCATCCCTTAAAATGGTCAAAGTATACCAGATTTCAAAGAAAATATCTCATTAAGACAAAAAGATTTCTTAGTCAATTATTAATTTAATTTCACTAGGTTTCATTTTTCATCCACAGATTAAGATTTCAAAGTGTTCTCTTCTTGCCTCCCCCAGTTTTTTTAAAAAGACGAAAACGGTTATATTTGTGAAATCCTTATTTTCTTTTCATTTCTAGCAAACAGTCCGAACAAAATTGTTTAGTCAAATCAATTTCAGGTCTGTCTTATTTCAAACAAGACAACAGTTTTAAGATCGTTTCTAGATTTTCAGTGTCTTATAATCGCGTGTGAATGAAGTTGGTAACCCTTTGCTCATGGACCTTCTTTCTTTATTAATTTCATTTCTGTTCCTTGCATGTTTTCCAGAAAAAAGGAAGTTCATCAAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCAAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCGCTCGTTGCAACAGCTTTTCAGCTACCACCTGGTATGAAGCTTACGTGCCCGCCCGCTATCGTTGCTGCCCGTGCTGCCCTCGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAATGTTCCTCTTGGTATATGGAGGGAGCACACTGAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTCCGAAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCGAGGGCTGAACGTATGCGACTGAAAGCTATTGCCGAGAAAGGAAAGGCAACAACAGTTATACCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGCCGTTGTGGTGTAGAAAGAATGGTGTTCGATCCTCTCCGGAAGGATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCGTAAGGCGACTTCGTATAGATACAAGCATATTCTAATAAATGATGTGCCATTGATATTGTTAATGGGACTCGACCTGTTATGAAATGTAGATTTAATAGATATTCAACCTCTGTCATGGCTGGCTATCATATAATGTTATGTATTATGCTGTTGAAATGCTTCTCTTTAGCTAAATATAAATGAAAGATCCTTATTAAAGACTGGTTGAATGTGAAAAAACCAGTCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTAAAGAGCCCCTACAAGATGGCGATTATGGAATGGACCATAATTATTGTGCACTAATATATAGTGAATTTCTGTGTGTATGATCTGTCGAGAAGATCTTGTGGCGATTATGGAATGGACCATTATTATTAGAGCTCTTTCAACCTTCATATTGATCAATTTTTTTCAGGTC AAAACGGCGTCGTACGGGGAACATTATTCGAACAATTATTGGCAAATTTATTGGAGAGTGGTTAGCCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTTGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGAGACTCACTTTCTTCGGAAAACTCTTATTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTCCTTTTCGTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGAACCAGCTTTGAGAAAATATCGTTAGAAGTGGAGACAGCTCCTCATTTCAACCCCTTGGCAGCAAAAGCTGCAACCATCAGTCTGTCAGGTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTCGTCACAGAAAAAAGGAAGTTCATCAAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCAAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCGCTCGTTGCAACAGCTTTTCAGCTACCACCTGGTATGAAGCTTACGTGCCCGCCCGCTATCGTTGCTGCCCGTGCTGCCCTCGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAATGTTCCTCTTGGTATATGGAGGGAGCACACTGAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTCCGAAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCGAGGGCTGAACGTATGCGACTGAAAGCTATTGCCGAGAAAGGAAAGGCAACAACAGTTATACCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGCCGTTGTGGTGTAGAAAGAATGGTGTTCGATCCTCTCCGGAAGGATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCGTAAGGCGACTTCGTATAGATACAAGCATATTCTAATAAATGATGTGCCATTGATATTGTTAATGGGACTCGACCTGTTATGAAATGTAGATTTAATAGATATTCAACCTCTGTCATGGCTGGCTATCATATAATGTTATGTATTATGCTGTTGAAATGCTTCTCTTTAGCTAAATATAAATGAAAGATCCTTATTAAAGACTGGTTGAATGTGAAAAAACCAGTCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTAAAGAGCCCCTACAAGATGGCGATTATGGAATGGACCATAATTATTGTGCACTAATATATAGTGAATTTCTGTGTGTATGATCTGTCGAGAAGATCTTGTGGCGATTATGGAATGGACCATTATTATTAGAGCTCTTTCAACCTTCATATTGATCAATTTTTTTCAGGTC ATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCTTTCCTCAGGAATATCAATAAACCAACCTCCTTTTCGTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGATGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGAACCAGCTTTGAGAAAATATCGTTAGAAGTGGAGACAGCTCCTCATTTCAACCCCTTGGCAGCAAAAGCTGCAACCATCAGTCTGTCAGGTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTCGTCACAGAAAAAAGGAAGTTCATCAAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCAAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCGCTCGTTGCAACAGCTTTTCAGCTACCACCTGGTATGAAGCTTACGTGCCCGCCCGCTATCGTTGCTGCCCGTGCTGCCCTCGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAATGTTCCTCTTGGTATATGGAGGGAGCACACTGAGAAGTTTTCATTTTCATGGTTTGTGGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTCCGAAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCGAGGGCTGAACGTATGCGACTGAAAGCTATTGCCGAGAAAGGAAAGGCAACAACAGTTATACCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGCCGTTGTGGTGTAGAAAGAATGGTGTTCGATCCTCTCCGGAAGGATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCGTAA MDFILRGMNDEASGCYSNDMDIQRCPFLRNINKPTSFSFSTLNITFPVRGAKGPIFEDGPNFDTAFKLFHGKDGVVPLSERTSFEKISLEVETAPHFNPLAAKAATISLSGFGPGGPFSFGNFSEKWKKQKSEASNKKDHSSQKKGSSSKHEALGSEWLETGNCPIAKSFRAVSGVLPLVATAFQLPPGMKLTCPPAIVAARAALARTAFVKNLRPQPLPSKMLVIAALGMAANVPLGIWREHTEKFSFSWFVAIHAAVPFIAMLRKSVLMPKTAMAMTIAASVLGQVIGSRAERMRLKAIAEKGKATTVIPTLESTPSYELTQVDAIVGGRCGVERMVFDPLRKDGRQTSSPANVCS
BLAST of Lsi07G011380.1 vs. TrEMBL
Match: A0A0A0L1Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005570 PE=4 SV=1) HSP 1 Score: 654.4 bits (1687), Expect = 7.7e-185 Identity = 332/358 (92.74%), Postives = 344/358 (96.09%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TrEMBL
Match: A0A067L5J4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02765 PE=4 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 3.3e-135 Identity = 246/359 (68.52%), Postives = 285/359 (79.39%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TrEMBL
Match: M5W9S6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007844mg PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.9e-131 Identity = 250/358 (69.83%), Postives = 289/358 (80.73%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TrEMBL
Match: G7K6U8_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_5g026910 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-130 Identity = 242/358 (67.60%), Postives = 286/358 (79.89%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TrEMBL
Match: F6I091_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0033g01160 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129 Identity = 252/361 (69.81%), Postives = 282/361 (78.12%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TAIR10
Match: AT5G45410.1 (AT5G45410.1 unknown protein) HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-111 Identity = 209/315 (66.35%), Postives = 243/315 (77.14%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. TAIR10
Match: AT4G25030.1 (AT4G25030.1 unknown protein) HSP 1 Score: 381.7 bits (979), Expect = 4.9e-106 Identity = 207/321 (64.49%), Postives = 241/321 (75.08%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. NCBI nr
Match: gi|659095464|ref|XP_008448595.1| (PREDICTED: uncharacterized protein LOC103490724 [Cucumis melo]) HSP 1 Score: 658.7 bits (1698), Expect = 5.9e-186 Identity = 333/358 (93.02%), Postives = 344/358 (96.09%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. NCBI nr
Match: gi|449456773|ref|XP_004146123.1| (PREDICTED: uncharacterized protein LOC101211606 [Cucumis sativus]) HSP 1 Score: 654.4 bits (1687), Expect = 1.1e-184 Identity = 332/358 (92.74%), Postives = 344/358 (96.09%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. NCBI nr
Match: gi|802585560|ref|XP_012070494.1| (PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]) HSP 1 Score: 489.6 bits (1259), Expect = 4.7e-135 Identity = 246/359 (68.52%), Postives = 285/359 (79.39%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. NCBI nr
Match: gi|743809015|ref|XP_011018409.1| (PREDICTED: uncharacterized protein LOC105121461 [Populus euphratica]) HSP 1 Score: 484.2 bits (1245), Expect = 2.0e-133 Identity = 250/359 (69.64%), Postives = 287/359 (79.94%), Query Frame = 1
BLAST of Lsi07G011380.1 vs. NCBI nr
Match: gi|502162118|ref|XP_004512398.1| (PREDICTED: uncharacterized protein LOC101511734 [Cicer arietinum]) HSP 1 Score: 479.9 bits (1234), Expect = 3.8e-132 Identity = 249/358 (69.55%), Postives = 283/358 (79.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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