Lsi07G011250.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi07G011250.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr07 : 16682274 .. 16684068 (-)
Sequence length830
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAACGACATCGACATCTGGTAGTTTCCAGATCGACAGCCGTGAAAATCTATGGAGATATGCTGTTATTCCTTGATTATATTATACAACTTCCTTCTCTCCCTGTTCATTGTTTTTCCTGGCTTGATTTGCATGGATGTACTGCGACGACGACGGCCAAAATTAGGTCAGGTTGAAACTTAGATCCGAGGTTGGAAATGGCATCATGGTCTTCGCTTTGCAATCTCCGCCATTCCTCCTTTTTTCGGAAAAAAGTGGAATGACAAAGCAAAAGTGGTTTTCCAACGAGAATATACCATTTAATGACTTTCAGTAATGATTGAGTCAGATCACGGATAAGTTGGATAACGGAGACTGTAATAAAGTTATTTTGCAGTTATTAGAATGCTGACTCGATTTTATTCCTGTTTCTTTTTGTTGTTTCCAAATTGATTGCTTGATTGAACTTGTGCATGATCTCTGGGTTATTACCCTATAACAGGACTGTAGATGTTAGGGCAATAAGTGCTGAAAATTGTAAGAACACGATATCTTTGCTCTGTTCTACGGTACTAAAATATTGTAGTTTGTATCACAACTTGATGAGGCTGAGTTTTGCAGGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGAACACTAGTAAGTTCTTTCTTTCACTGAATGGAATTCCTAAAGAAAATTGTTTATAGTTAGAATTATGTGATCAAATTCTCCAATCTAACCTTTTATTGCAATTATGACTGATTTCTAGGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGGTAATTTTTCTGAATGTTTAAGCATCTGTCAGAACAGTTTTGTCGATTGTTCTTTAGGGGAAAAGTGAGATTGAGAATTGATATTAATGAATTCAACACTATGAAATGGATCTTTTCTATTTTTGCGATGACATTGAAATACTCTTTACTGCAATCAACTCTATTAAGATTAAAGATTTACCTTAATCTAAAATGTACCAGAATGAGCTTAACTGAAGAGAATCAAATATTTTTGCAGCGAAATCCAAGGAAGATGCAATGAGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTTCTGCTAGCTGATGAGTTTCTCGATTATATCTGTATCGACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTAATCGTATTTATCTAAATTGTGTAACAATGAACTATGTGCAAGTATTATTACTGTCATATTTTGCAAATGCATCTTCTCAACCTTTAACCAAATTATGATACTAGGCTTATTGGAAATAACTTTTTAAGTGTTAAGCACTTTTGAAAAGTCATTCCAAACAGGTCTGAAGAACTAACTAGGATGACCGAATCATTTTTGTTTATTCATAACAACAAATTCAAATTTACACGAAGGAATTAGACAGCCTCCTGCTATGTTGCATTTATGGCTGACAGGTTACAAAGCCAAGGATCAAACGAAAGCTCCTATTCTCATGGCATTAACAAGCAACTTCAAACTATTGCCCACACAACAGGACCACTAGATCTGGTGAAATAACACACTCTTGAAGACAGGATAACTTACAAGTAACTTTTAGTTGTGCTGAAAGGATCTTAGAAATTACAAGATATGTATCAAATTTCTAAATACATCTGCTTCTTTTAGGGGGCTATGGAGAATGATCATGTATATCTAAC

mRNA sequence

AATTAACGACATCGACATCTGGTAGTTTCCAGATCGACAGCCGTGAAAATCTATGGAGATATGCTGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCGAAATCCAAGGAAGATGCAATGAGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTTCTGCTAGCTGATGAGTTTCTCGATTATATCTGTATCGACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTAATCGTATTTATCTAAATTGTGTAACAATGAACTATGTGCAAGTATTATTACTGTCATATTTTGCAAATGCATCTTCTCAACCTTTAACCAAATTATGATACTAGGCTTATTGGAAATAACTTTTTAAGTGTTAAGCACTTTTGAAAAGTCATTCCAAACAGGTCTGAAGAACTAACTAGGATGACCGAATCATTTTTGTTTATTCATAACAACAAATTCAAATTTACACGAAGGAATTAGACAGCCTCCTGCTATGTTGCATTTATGGCTGACAGGTTACAAAGCCAAGGATCAAACGAAAGCTCCTATTCTCATGGCATTAACAAGCAACTTCAAACTATTGCCCACACAACAGGACCACTAGATCTGGTGAAATAACACACTCTTGAAGACAGGATAACTTACAAGGGGCTATGGAGAATGATCATGTATATCTAAC

Coding sequence (CDS)

ATGCTGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGA

Protein sequence

MLRSLRSMLRKPRPCRRTQAMKTNSFSMDYTSRPLLEP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi07G011250Lsi07G011250gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi07G011250.1Lsi07G011250.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi07G011250.1.three_prime_UTR.4Lsi07G011250.1.three_prime_UTR.4three_prime_UTR
Lsi07G011250.1.three_prime_UTR.3Lsi07G011250.1.three_prime_UTR.3three_prime_UTR
Lsi07G011250.1.three_prime_UTR.2Lsi07G011250.1.three_prime_UTR.2three_prime_UTR
Lsi07G011250.1.three_prime_UTR.1Lsi07G011250.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi07G011250.1.CDS.2Lsi07G011250.1.CDS.2CDS
Lsi07G011250.1.CDS.1Lsi07G011250.1.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi07G011250.1.five_prime_UTR.1Lsi07G011250.1.five_prime_UTR.1five_prime_UTR