Lsi07G008850.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G008850.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RAN GTPase 3
Location	chr07 : 10132534 .. 10135262 (-)
Sequence length	1218

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATTTCACACTCTTCCCCCCACTCGATTTTGCATTTCATCGTTTTTCTTTTTCTCACATTCCTCGCAGTAACTCTCTCTCTTCCCCTTCTCTGTTCTTCTTCTTCCTCCATAAAGTTTGAGGTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTTTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTTTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTGTCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTCTTTCTTCTCTTTCCTCTGGATTTCTCTTCTTTTCTTGCCTTCTCTTTCGTTTTCCATTCCCTTGATTTCCTTCTCACTTGTTGCTTCCCCTTTTCGATTCTGATTTCTGCTTACTGTTTGCTCTGTTGATTTGAGTGTTCTGATTTCTGGGGTTTGGTTAATTAGCATGTTCTGCTTTGCCGTGAGGGTTGTAATAGCCTAGATCTGTTTGATGGAACCTTTGTTTTCTTCTCAATCTTGTGTTCTTCTGCTTCAATTGAGTGTTTTAATGCTCGTGAAGTTAGTTTTGATATCTTCTTTTATTGTGTTATGTTGCGGCTTTGTTCTTCAACTTCCATGGCTGTAAGGGTAATTGCGCTACAAGCTTAGATTCAGATGGCATTGAAGAATTCATTTATTAGATGTTAATGAAGTAGTTGGGACTTGGGGACCCTTGTTGAGGAAGACTTCGGATTCGTCTGTTTCGTAGATCGTGTGCTCTGAGCCATTTCTTTTCCTTTCTTTTTTTTTTTTTCTTTTTCTTTTATTTTCTAAAAAAAAAAAAAAACTCTTATAATTTATATTAGCAACAGAGATCGTTTTAATTCTTCCAATTATTCTTTCTCCTGTCTCCCGAGAAAGTATAAAGGTATTTAGCTTCCTTCTACAGGAATTCGTTTCCTGTTTTCCAAGGAGGGACATATTAAAATTCTCTTTCTTGCATTGTAGCTTCTCAAAAAATCTGTTCCTTAAAATGTCTGGTGGAGGAAAAAATAAAACCAAGATTGCATAACATTTCAATGAAATTTCTATTCTTCTGGGTTAGCAGGGTCCTTGATCACAATTAGTTCCATTGATTCCCTATTTTAAGAGAAGCTCAAACTGTTGTTATAATTACTTAGAAGTAGTTTTAGAGTATCCTACTAAGAAGTGAAACTATGTCATTTGCTGGAATGTTGTTGTGTGTGGAACTTTTGTCATAAGTTCTTGGGCTTTCTATTCTCACTGGAACTCAAGGATACCGTTGTACAACTTATAGAATAGATCTGTCGTGGCTTCTGGTCTCACTATTATGAACTTTTATTGTTTTTTCCAAATTAGCCCAAGCTCTCATAAAAGCTGAAGCTTCTTTATATGGATTGCCTAGAAGAAACGAAGGTGTCACTCTCACTCCTTAACAATTATGAATCATCACTATCATTCCTCAGCACTCTCCTTCCACAAAATAAGCATCTGACAAAGGAAATAAAATGATCTGCAGTTCTTGATGTGTTTTCCAAGTCTCTATTAACTATGGTTTTACTTTTTATTTTTGTTATACATGATAATGATGCCTATGAATGTTGATTAGTAAATTGCAATTTCTGTGGTGGGTTACAATTCTTTTTCTAATCAGTTGATAAGATCGCTTCATTATTCACCAATACAAGTCTTGTTAGATTGATTGTACGATCTAGTTTACAATCTCTCAGGTTTTCTTTAAATTGAATGAGCTGTTCAGATCTGTGTGGCTTCTCTGTCTCTAGGTACCGTGCCATCACTAGTGCCTACTATCGAGGAGCAGTCGGTGCACTCCTTGTATATGATGTTACCCGTCATGCGACATTTGAGAATGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTCGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAATCCTACGCCGAGAGGGAATCACTGTACTTCATTGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCAGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTTCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCAAGCTAACTTTGGTAATAATCTGTCTAGGTGATTTTGGATTTCATGTACTGTAATATTTGTTTTTTTTCCCCTTGAAGATGGTTAAGAAAGAGGAAGATATATCCCCAAGACGCTGAATCTTGCTGTATTACAGAAAAAGAAGAGTACCTGAGCCACATGATTGGTTTGTGGTTGCTGTTGTGTCCATCATTATTAGCTTCTACCAAAAAAAAATCTTGGTTACAAGTTTGGTTTCTATGGTAAATGTTCTCCATCTTAGCTTTTAGCCCTTTGATCTATATAAGCATTCATGATTTGCTATGATGATGATGATGAACCCTTATATTCATTCATATGTTGTTAAGTCAGTTATGATGGCTCTTTGAGCTGTGAACTTCATATTTGTAACTGTTAAATTAAATTTTTAGTCCATGCTTCAATTTTTGTTCAA

mRNA sequence

ATTGATTTCACACTCTTCCCCCCACTCGATTTTGCATTTCATCGTTTTTCTTTTTCTCACATTCCTCGCAGTAACTCTCTCTCTTCCCCTTCTCTGTTCTTCTTCTTCCTCCATAAAGTTTGAGGTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTTTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTTTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTGTCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACTAGTGCCTACTATCGAGGAGCAGTCGGTGCACTCCTTGTATATGATGTTACCCGTCATGCGACATTTGAGAATGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTCGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAATCCTACGCCGAGAGGGAATCACTGTACTTCATTGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCAGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTTCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCAAGCTAACTTTGGTAATAATCTGTCTAGGTGATTTTGGATTTCATGTACTGTAATATTTGTTTTTTTTCCCCTTGAAGATGGTTAAGAAAGAGGAAGATATATCCCCAAGACGCTGAATCTTGCTGTATTACAGAAAAAGAAGAGTACCTGAGCCACATGATTGGTTTGTGGTTGCTGTTGTGTCCATCATTATTAGCTTCTACCAAAAAAAAATCTTGGTTACAAGTTTGGTTTCTATGGTAAATGTTCTCCATCTTAGCTTTTAGCCCTTTGATCTATATAAGCATTCATGATTTGCTATGATGATGATGATGAACCCTTATATTCATTCATATGTTGTTAAGTCAGTTATGATGGCTCTTTGAGCTGTGAACTTCATATTTGTAACTGTTAAATTAAATTTTTAGTCCATGCTTCAATTTTTGTTCAA

Coding sequence (CDS)

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTTTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTTTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTGTCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACTAGTGCCTACTATCGAGGAGCAGTCGGTGCACTCCTTGTATATGATGTTACCCGTCATGCGACATTTGAGAATGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTCGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAATCCTACGCCGAGAGGGAATCACTGTACTTCATTGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCAGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTTCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCAAGCTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS

Homology

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BLAST of Lsi07G008850.1 vs. Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-98
Identity = 179/218 (82.11%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AERESLYF+ETSALEA NVE AF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESG-LNRIKCCSS 218
           +AVE G++GS+S +P++G+ IN+K++S  L R  CCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

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BLAST of Lsi07G008850.1 vs. Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.1e-98
Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

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BLAST of Lsi07G008850.1 vs. Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95
Identity = 175/218 (80.28%), Postives = 192/218 (88.07%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV T++ K  AERE LYF+ETSALEA NVE AF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVE G+ G+ SS P +GE INIKDE S   +  CCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

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BLAST of Lsi07G008850.1 vs. Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-95
Identity = 173/218 (79.36%), Postives = 197/218 (90.37%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+DGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE   RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLV V TEDGK++AE+ESLYF+ETSALEA NVE AF+EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINI-KDESGLNRIKCCSS 218
           +AVE G+  S S VP+QG+ IN+ +D S LNR +CCS+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

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BLAST of Lsi07G008850.1 vs. Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 348.2 bits (892), Expect = 6.5e-95
Identity = 177/216 (81.94%), Postives = 199/216 (92.13%), Query Frame = 1


Query: 2   AGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKV 61
           AGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+L VDGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVV 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWLKEL++HTD NIVV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKK 181
           MLVGNKSDLRHLVAV T++GK++AERESLYF+ETSALE+ NVE AFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCS 217
           +VE G++  A S P +GEKINIKD+ S + +  CCS
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216

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BLAST of Lsi07G008850.1 vs. TrEMBL
Match: A0A0A0KXK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 2.7e-116
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

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BLAST of Lsi07G008850.1 vs. TrEMBL
Match: M5X2E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.3e-106
Identity = 201/218 (92.20%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAE+ESLYF+ETSALEA NVE +FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAKNVENSFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVEGGENG+A SVPA GEKINIKD+ S L R+ CCSS
Sbjct: 181 KAVEGGENGTA-SVPATGEKINIKDDVSALKRVGCCSS 217

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BLAST of Lsi07G008850.1 vs. TrEMBL
Match: F6H2M2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01160 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104
Identity = 194/217 (89.40%), Postives = 207/217 (95.39%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 35  MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 94

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTD NIV
Sbjct: 95  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 154

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGK+YAERESLYF+ETSALEA NVE AFAEVLTQIY IVSK
Sbjct: 155 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 214

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCS 217
           K+VEGG+ G+ASSVPA+GE+IN+KD+ S L R+ CCS
Sbjct: 215 KSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 251

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BLAST of Lsi07G008850.1 vs. TrEMBL
Match: A5BUD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035368 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104
Identity = 194/217 (89.40%), Postives = 207/217 (95.39%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGK+YAERESLYF+ETSALEA NVE AFAEVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCS 217
           K+VEGG+ G+ASSVPA+GE+IN+KD+ S L R+ CCS
Sbjct: 181 KSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 217

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BLAST of Lsi07G008850.1 vs. TrEMBL
Match: Q08150_PEA (GTP-binding protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.0e-103
Identity = 196/218 (89.91%), Postives = 206/218 (94.50%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNK+DLRHLVAV TEDGKSYAE+ESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VEG ENG+A SVPA+GEKI++K D S L R+ CCSS
Sbjct: 181 KTVEGAENGNA-SVPAKGEKIDLKNDVSALKRVGCCSS 217

[Close]

BLAST of Lsi07G008850.1 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B)

HSP 1 Score: 359.8 bits (922), Expect = 1.2e-99
Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Lsi07G008850.1 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D)

HSP 1 Score: 347.4 bits (890), Expect = 6.2e-96
Identity = 174/217 (80.18%), Postives = 200/217 (92.17%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KA+E GE+  + +VP++GEKI++ D S + +  CCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Lsi07G008850.1 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 347.4 bits (890), Expect = 6.2e-96
Identity = 177/218 (81.19%), Postives = 199/218 (91.28%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE+ESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINI-KDESGLNRIKCCSS 218
           KA+E      +++VP++G+KI+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Lsi07G008850.1 vs. TAIR10
Match: AT1G06400.1 (AT1G06400.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 337.0 bits (863), Expect = 8.4e-93
Identity = 169/218 (77.52%), Postives = 194/218 (88.99%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNK DLRHLVAV TE+ K++AERESLYF+ETSAL+A NVE AF EVLTQI+ IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           ++V+GG  G ++ +P +GE IN+K D S L R+ CCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Lsi07G008850.1 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 318.2 bits (814), Expect = 4.0e-87
Identity = 158/220 (71.82%), Postives = 193/220 (87.73%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MA YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           +M VGNK+DLRHL AV TED K++AERE+ +F+ETSALE++NVE AF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAVEGGENGSASSVPAQGEKINI---KDESGLNRIKCCSS 218
           KA++ G++ +A     +G+ IN+    D S + ++ CCS+
Sbjct: 181 KALDIGDDPAAL---PKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Lsi07G008850.1 vs. NCBI nr
Match: gi|449438915|ref|XP_004137233.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 3.9e-116
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Lsi07G008850.1 vs. NCBI nr
Match: gi|659101717|ref|XP_008451755.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 8.7e-116
Identity = 214/217 (98.62%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

[Close]

BLAST of Lsi07G008850.1 vs. NCBI nr
Match: gi|470115898|ref|XP_004294128.1| (PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca])

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 202/218 (92.66%), Postives = 210/218 (96.33%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAE+ESLYF+ETSALEAVNVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAVNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVE GENG+ASSVPA+GEKINIKD+ S L R+ CCSS
Sbjct: 181 KAVEAGENGTASSVPAKGEKINIKDDVSALKRVGCCSS 218

[Close]

BLAST of Lsi07G008850.1 vs. NCBI nr
Match: gi|1009161879|ref|XP_015899132.1| (PREDICTED: ras-related protein RABA1b [Ziziphus jujuba])

HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107
Identity = 200/218 (91.74%), Postives = 210/218 (96.33%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHT+SNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTESNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAE+ESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVEGGENG+ SSVP++GEKINIKD+ S L R+ CCSS
Sbjct: 181 KAVEGGENGTDSSVPSKGEKINIKDDVSALKRVGCCSS 218

[Close]

BLAST of Lsi07G008850.1 vs. NCBI nr
Match: gi|595872726|ref|XP_007212036.1| (hypothetical protein PRUPE_ppa011259mg [Prunus persica])

HSP 1 Score: 392.1 bits (1006), Expect = 6.2e-106
Identity = 201/218 (92.20%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAE+ESLYF+ETSALEA NVE +FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAKNVENSFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVEGGENG+A SVPA GEKINIKD+ S L R+ CCSS
Sbjct: 181 KAVEGGENGTA-SVPATGEKINIKDDVSALKRVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Lsi07G008850.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RB11D_LOTJA	1.6e-98	82.11	Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1	[more]
RAA1B_ARATH	2.1e-98	86.24	Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1	[more]
YPT3_NICPL	1.3e-95	80.28	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1	[more]
RB11E_LOTJA	1.7e-95	79.36	Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1	[more]
RIC2_ORYSJ	6.5e-95	81.94	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2	[more]

BLAST of Lsi07G008850.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK6_CUCSA	2.7e-116	99.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1	[more]
M5X2E3_PRUPE	4.3e-106	92.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1	[more]
F6H2M2_VITVI	1.8e-104	89.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01160 PE=4 SV=...	[more]
A5BUD1_VITVI	1.8e-104	89.40	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035368 PE=4 SV=1	[more]
Q08150_PEA	2.0e-103	89.91	GTP-binding protein OS=Pisum sativum PE=2 SV=1	[more]

BLAST of Lsi07G008850.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16920.1	1.2e-99	86.24	RAB GTPase homolog A1B	[more]
AT4G18800.1	6.2e-96	80.18	RAB GTPase homolog A1D	[more]
AT5G45750.1	6.2e-96	81.19	RAB GTPase homolog A1C	[more]
AT1G06400.1	8.4e-93	77.52	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	4.0e-87	71.82	RAB GTPase homolog A1F	[more]

BLAST of Lsi07G008850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438915\|ref\|XP_004137233.1\|	3.9e-116	99.08	PREDICTED: ras-related protein RABA1b-like [Cucumis sativus]	[more]
gi\|659101717\|ref\|XP_008451755.1\|	8.7e-116	98.62	PREDICTED: ras-related protein RABA1b-like [Cucumis melo]	[more]
gi\|470115898\|ref\|XP_004294128.1\|	1.1e-107	92.66	PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca]	[more]
gi\|1009161879\|ref\|XP_015899132.1\|	4.3e-107	91.74	PREDICTED: ras-related protein RABA1b [Ziziphus jujuba]	[more]
gi\|595872726\|ref\|XP_007212036.1\|	6.2e-106	92.20	hypothetical protein PRUPE_ppa011259mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G008850	Lsi07G008850	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G008850.1.three_prime_UTR.1	Lsi07G008850.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G008850.1.CDS.2	Lsi07G008850.1.CDS.2	CDS
Lsi07G008850.1.CDS.1	Lsi07G008850.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G008850.1.five_prime_UTR.1	Lsi07G008850.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G008850.1	Lsi07G008850.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 2.4
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 4.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..205 score: 5.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180 score: 1.17
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 8.9E-43coord: 55..77 score: 8.9E-43coord: 117..130 score: 8.9E-43coord: 37..53 score: 8.9E-43coord: 152..174 score: 8.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 5..217 score: 2.2E
None	No IPR available	PANTHER	PTHR24073:SF432	RAS-RELATED PROTEIN RABA1C-RELATED	coord: 5..217 score: 2.2E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 1.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..173 score: 2.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 1.1E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 score: 9.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..215 score: 35