Lsi07G006930.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G006930.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_62
Location	chr07 : 7467168 .. 7468049 (+)
Sequence length	882

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCCATAATGAACTGGAACTTCATCTTCCTGGTTTTCTCTTTCACTCTCTGCCCATTTGTTCACTCCTTGCAGGGCAATGACTCCATCTCCATGGATGCCTTTCTTCAAGAAACTGCCTTCAAGACCTTGGTTCGATGCAGGCCGTATACGGGCGCTTTGTATCAAGCCAACCTCCCGGCGAATCTCTCCGGCATGGAGGTCTCTGTTGTCCGGTTAAGAAGCCGGAGGCTGTGGGACAAAGGAGCTAATTTCAGTCACTTTGGCATTCCATCAAACACCTTGCCGGTGCCCCACGTTAGAAGACTGGTAATAGTGTACCAAGACTTCGGGAACTGGTCTTCTTCCTACTTCAAAATTCCAGGCTTCTCACTCCTAACTCCAGTCGTCGGATTCATGGTTTTCAACGCAACATCAAACACAGAAACCAAAAACATCACAAAACTGAGCATCACCACGATTGAAAACCGCATAGAAATCCACTTCCCAAACCTGAAATTACGTTTAGGCAAATCGTCGAACAGATGGTGTGCAGAATTTGATGAAGAGGGTATGTTCCATCTGACCCAAATGGGCTCCCCTGACGTATGTTACTCGAGAAAACAGGGCTATTTTGCAGTGGTTTCAAAGTTGAAGAGGAAGAAGAAGACGTGGTATTTTTGGGTGATTGGGTTTGTTTTGGGCGTTGGTGGACTTGTGGTAGCTGGTTATGCAGCCATGGTTACAATCAGAGCTTTGAAGACTAAGAAGATTCAGATAATGGAGAAACAAGCTGATGAAGATTTGGTTTTACAGAGTAGATGGGTTGGCAACAGCAAAATGCCAAGCGCAGCAGTCACAAGAACAATGCCAGTTCTTGAGAATTCAAGTTTTTCTTAG

mRNA sequence

ATGGTGTCCATAATGAACTGGAACTTCATCTTCCTGGTTTTCTCTTTCACTCTCTGCCCATTTGTTCACTCCTTGCAGGGCAATGACTCCATCTCCATGGATGCCTTTCTTCAAGAAACTGCCTTCAAGACCTTGGTTCGATGCAGGCCGTATACGGGCGCTTTGTATCAAGCCAACCTCCCGGCGAATCTCTCCGGCATGGAGGTCTCTGTTGTCCGGTTAAGAAGCCGGAGGCTGTGGGACAAAGGAGCTAATTTCAGTCACTTTGGCATTCCATCAAACACCTTGCCGGTGCCCCACGTTAGAAGACTGGTAATAGTGTACCAAGACTTCGGGAACTGGTCTTCTTCCTACTTCAAAATTCCAGGCTTCTCACTCCTAACTCCAGTCGTCGGATTCATGGTTTTCAACGCAACATCAAACACAGAAACCAAAAACATCACAAAACTGAGCATCACCACGATTGAAAACCGCATAGAAATCCACTTCCCAAACCTGAAATTACGTTTAGGCAAATCGTCGAACAGATGGTGTGCAGAATTTGATGAAGAGGGTATGTTCCATCTGACCCAAATGGGCTCCCCTGACGTATGTTACTCGAGAAAACAGGGCTATTTTGCAGTGGTTTCAAAGTTGAAGAGGAAGAAGAAGACGTGGTATTTTTGGGTGATTGGGTTTGTTTTGGGCGTTGGTGGACTTGTGGTAGCTGGTTATGCAGCCATGGTTACAATCAGAGCTTTGAAGACTAAGAAGATTCAGATAATGGAGAAACAAGCTGATGAAGATTTGGTTTTACAGAGTAGATGGGTTGGCAACAGCAAAATGCCAAGCGCAGCAGTCACAAGAACAATGCCAGTTCTTGAGAATTCAAGTTTTTCTTAG

Coding sequence (CDS)

ATGGTGTCCATAATGAACTGGAACTTCATCTTCCTGGTTTTCTCTTTCACTCTCTGCCCATTTGTTCACTCCTTGCAGGGCAATGACTCCATCTCCATGGATGCCTTTCTTCAAGAAACTGCCTTCAAGACCTTGGTTCGATGCAGGCCGTATACGGGCGCTTTGTATCAAGCCAACCTCCCGGCGAATCTCTCCGGCATGGAGGTCTCTGTTGTCCGGTTAAGAAGCCGGAGGCTGTGGGACAAAGGAGCTAATTTCAGTCACTTTGGCATTCCATCAAACACCTTGCCGGTGCCCCACGTTAGAAGACTGGTAATAGTGTACCAAGACTTCGGGAACTGGTCTTCTTCCTACTTCAAAATTCCAGGCTTCTCACTCCTAACTCCAGTCGTCGGATTCATGGTTTTCAACGCAACATCAAACACAGAAACCAAAAACATCACAAAACTGAGCATCACCACGATTGAAAACCGCATAGAAATCCACTTCCCAAACCTGAAATTACGTTTAGGCAAATCGTCGAACAGATGGTGTGCAGAATTTGATGAAGAGGGTATGTTCCATCTGACCCAAATGGGCTCCCCTGACGTATGTTACTCGAGAAAACAGGGCTATTTTGCAGTGGTTTCAAAGTTGAAGAGGAAGAAGAAGACGTGGTATTTTTGGGTGATTGGGTTTGTTTTGGGCGTTGGTGGACTTGTGGTAGCTGGTTATGCAGCCATGGTTACAATCAGAGCTTTGAAGACTAAGAAGATTCAGATAATGGAGAAACAAGCTGATGAAGATTTGGTTTTACAGAGTAGATGGGTTGGCAACAGCAAAATGCCAAGCGCAGCAGTCACAAGAACAATGCCAGTTCTTGAGAATTCAAGTTTTTCTTAG

Protein sequence

MVSIMNWNFIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANLSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEEGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLENSSFS

Homology

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BLAST of Lsi07G006930.1 vs. TrEMBL
Match: A0A0A0KUZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050820 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 7.1e-136
Identity = 244/260 (93.85%), Postives = 250/260 (96.15%), Query Frame = 1


Query: 33  MDAFLQETAFKTLVRCRPYTGALYQANLPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP 92
           MDAFLQETAFKTLVR RPYTGALY+A+LPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP
Sbjct: 1   MDAFLQETAFKTLVRRRPYTGALYRASLPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP 60

Query: 93  SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTETKNITKLSI 152
           SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTE KNITKLSI
Sbjct: 61  SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTEAKNITKLSI 120

Query: 153 TTIENRIEIHFPNLKLRLGKSSNRWCAEFDEEGMFHLTQMGSPDVCYSRKQGYFAVVSKL 212
           TT+ENRIEIHFPNLKL LGKSSN WCAEFDE+GMFHL  MGS +VCYSRKQGYFAVVSKL
Sbjct: 121 TTLENRIEIHFPNLKLPLGKSSNTWCAEFDEDGMFHLIPMGSLEVCYSRKQGYFAVVSKL 180

Query: 213 KRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGN 272
           KRKKKTWY WVIGFVLGVG +VVAGYAAMVTIRALKTKKIQIMEKQAD DLVLQSRWVGN
Sbjct: 181 KRKKKTWYLWVIGFVLGVGVMVVAGYAAMVTIRALKTKKIQIMEKQADGDLVLQSRWVGN 240

Query: 273 SKMPSAAVTRTMPVLENSSF 293
           SKMPSAAVTRTMPVLENSSF
Sbjct: 241 SKMPSAAVTRTMPVLENSSF 260

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BLAST of Lsi07G006930.1 vs. TrEMBL
Match: V4VJ37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024134mg PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 5.5e-88
Identity = 159/285 (55.79%), Postives = 206/285 (72.28%), Query Frame = 1


Query: 5   MNWNFIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANL 64
           M WNF+ L+ S  L  FVHSL  N + S+D  LQ+ AF+TL+R RP+TG LY A LPANL
Sbjct: 1   MTWNFMCLILSLFLSQFVHSLNNNTTDSLDTCLQDFAFRTLIRHRPHTGNLYNAMLPANL 60

Query: 65  SGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGF 124
           SGM VS+VRLRSRRLW++GANF +F IPS T+PVPHV+RL +VY DFGNWSS Y+ +PG+
Sbjct: 61  SGMSVSIVRLRSRRLWNRGANFCNFHIPSRTIPVPHVKRLALVYHDFGNWSSHYYTVPGY 120

Query: 125 SLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEE 184
           S++TPV+GF VF+A SN  ++++ KLS+ T+   I I F N  L  G  S   CA F   
Sbjct: 121 SMITPVIGFKVFDA-SNMMSRSVKKLSLNTMGKPIVIRFSNSTLSDGMVSKARCAIFSSN 180

Query: 185 GMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTI 244
           G  HL ++   +VC+S+ QG+F++V  LKRK+  W  W IG VLG+GG ++ GY  + ++
Sbjct: 181 GTLHLGEITLANVCFSQDQGHFSIVVPLKRKRGQWKLWAIGIVLGIGGFILIGYVVIASV 240

Query: 245 RALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLEN 290
           + LK KKIQ+MEKQADEDLVL + WVG SKMPSA VTRT P LE+
Sbjct: 241 KVLKAKKIQVMEKQADEDLVLDTIWVGRSKMPSATVTRTQPTLED 284

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BLAST of Lsi07G006930.1 vs. TrEMBL
Match: A0A067G9Y3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023060mg PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 5.5e-88
Identity = 159/285 (55.79%), Postives = 206/285 (72.28%), Query Frame = 1


Query: 5   MNWNFIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANL 64
           M WNF+ L+ S  L  FVHSL  N + S+D  LQ+ AF+TL+R RP+TG LY A LPANL
Sbjct: 1   MTWNFMCLILSLFLSQFVHSLNNNTTDSLDTCLQDFAFRTLIRHRPHTGNLYNAMLPANL 60

Query: 65  SGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGF 124
           SGM VS+VRLRSRRLW++GANF +F IPS T+PVPHV+RL +VY DFGNWSS Y+ +PG+
Sbjct: 61  SGMSVSIVRLRSRRLWNRGANFCNFHIPSRTIPVPHVKRLALVYHDFGNWSSHYYTVPGY 120

Query: 125 SLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEE 184
           S++TPV+GF VF+A SN  ++++ KLS+ T+   I I F N  L  G  S   CA F   
Sbjct: 121 SMITPVIGFKVFDA-SNMMSRSVKKLSLNTMGKPIVIRFSNSTLSDGMVSKARCAIFSSN 180

Query: 185 GMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTI 244
           G  HL ++   +VC+S+ QG+F++V  LKRK+  W  W IG VLG+GG ++ GY  + ++
Sbjct: 181 GTLHLGEITLANVCFSQDQGHFSIVVPLKRKRGQWKLWAIGIVLGIGGFILIGYVVIASV 240

Query: 245 RALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLEN 290
           + LK KKIQ+MEKQADEDLVL + WVG SKMPSA VTRT P LE+
Sbjct: 241 KVLKAKKIQVMEKQADEDLVLDTIWVGRSKMPSATVTRTQPTLED 284

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BLAST of Lsi07G006930.1 vs. TrEMBL
Match: A0A0L9VQ18_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g019800 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84
Identity = 162/290 (55.86%), Postives = 218/290 (75.17%), Query Frame = 1


Query: 5   MNWNFIFLV-FSFTLCPFVHSLQGND--SISMDAFLQETAFKTLVRCRPYTGALYQANLP 64
           MNW+FI+++  + + C  VHSL GN   S S+++ +Q+ AF++LV+ +P TGALY A LP
Sbjct: 5   MNWDFIWVLPLTLSCCSLVHSL-GNTPASESLNSLVQDFAFRSLVKHKPQTGALYDALLP 64

Query: 65  ANLSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKI 124
            NLSGM++S+VRLRSRRLW+KGANFS+F IP  T+ +PHV+RL IVYQ+ GNWS+ Y+ +
Sbjct: 65  RNLSGMDISIVRLRSRRLWNKGANFSYFRIPPRTVSIPHVKRLAIVYQNLGNWSTLYYNL 124

Query: 125 PGFSLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGK---SSNRWC 184
           PG+SL++ VVGF+VF+A++ T+T     L++ T+   I I FPN+ L +G+   +S   C
Sbjct: 125 PGYSLISSVVGFLVFDASNVTDTSE-RNLTLNTMGQPISIQFPNITL-MGRGHINSRVRC 184

Query: 185 AEFDEEGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGY 244
             F+  G F LTQM +P VCYSR QG+F+VV  L++K+  WY WVIGFV+G   L++ GY
Sbjct: 185 VAFNANGTFQLTQMSAPGVCYSRDQGHFSVVLPLEKKRGRWYLWVIGFVVGFFSLIIVGY 244

Query: 245 AAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLE 289
           A   ++R LKTK+IQ MEKQA+ED VLQSRWVGNSKMPSAAVTRT PVLE
Sbjct: 245 AGFSSMRLLKTKRIQAMEKQANEDQVLQSRWVGNSKMPSAAVTRTQPVLE 291

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BLAST of Lsi07G006930.1 vs. TrEMBL
Match: A0A0S3QXJ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G046500 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84
Identity = 162/290 (55.86%), Postives = 218/290 (75.17%), Query Frame = 1


Query: 5   MNWNFIFLV-FSFTLCPFVHSLQGND--SISMDAFLQETAFKTLVRCRPYTGALYQANLP 64
           MNW+FI+++  + + C  VHSL GN   S S+++ +Q+ AF++LV+ +P TGALY A LP
Sbjct: 40  MNWDFIWVLPLTLSCCSLVHSL-GNTPASESLNSLVQDFAFRSLVKHKPQTGALYDALLP 99

Query: 65  ANLSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKI 124
            NLSGM++S+VRLRSRRLW+KGANFS+F IP  T+ +PHV+RL IVYQ+ GNWS+ Y+ +
Sbjct: 100 RNLSGMDISIVRLRSRRLWNKGANFSYFRIPPRTVSIPHVKRLAIVYQNLGNWSTLYYNL 159

Query: 125 PGFSLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGK---SSNRWC 184
           PG+SL++ VVGF+VF+A++ T+T     L++ T+   I I FPN+ L +G+   +S   C
Sbjct: 160 PGYSLISSVVGFLVFDASNVTDTSE-RNLTLNTMGQPISIQFPNITL-MGRGHINSRVRC 219

Query: 185 AEFDEEGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGY 244
             F+  G F LTQM +P VCYSR QG+F+VV  L++K+  WY WVIGFV+G   L++ GY
Sbjct: 220 VAFNANGTFQLTQMSAPGVCYSRDQGHFSVVLPLEKKRGRWYLWVIGFVVGFFSLIIVGY 279

Query: 245 AAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLE 289
           A   ++R LKTK+IQ MEKQA+ED VLQSRWVGNSKMPSAAVTRT PVLE
Sbjct: 280 AGFSSMRLLKTKRIQAMEKQANEDQVLQSRWVGNSKMPSAAVTRTQPVLE 326

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BLAST of Lsi07G006930.1 vs. TAIR10
Match: AT4G23720.1 (AT4G23720.1 Protein of unknown function (DUF1191))

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-52
Identity = 122/299 (40.80%), Postives = 173/299 (57.86%), Query Frame = 1


Query: 13  VFSFTLCPFVHSLQGNDSI-------SMDAFLQETAFKTLVRCRPYTGALYQANLPANLS 72
           +FS TL   +  L    SI       S+   L+  A KTL   + +TGALY+A LP NLS
Sbjct: 18  LFSSTLQSSLIHLNSTTSILNVTLPHSLSQSLENFALKTLTT-QHHTGALYRAILPENLS 77

Query: 73  GMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFS 132
           G+EVSVVRL  + LW+ GA FS+  IP  ++ VP  RR+VIVYQ+ GNWS+ ++ +PG+ 
Sbjct: 78  GIEVSVVRLTGKSLWNSGAKFSNVLIPERSVSVPPARRVVIVYQNLGNWSNHWYTVPGYR 137

Query: 133 LLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKS--SNRWCAEF-- 192
           L+T V+GF V + +     K I    I  ++N +E+ F +L     +   S   C  F  
Sbjct: 138 LITSVLGFKVLDVSDQDNVKEI----ILKMKNPVEVSFRDLPKERDEEMLSRVRCVSFKA 197

Query: 193 ---DEEGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKT-------WYFWVIGFVLGVG 252
              DEE   H+++M  P VCY    G ++V+  L+  KK        W+ W++GFVLG G
Sbjct: 198 QTKDEEAT-HISRMVIPGVCYGSSHGDYSVIEPLENDKKNVESWSTWWWLWIVGFVLGFG 257

Query: 253 GLVVAGYAAMVTIRALKTKKIQI-MEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLEN 290
              + G+   + IR  + KKIQ+ ME+ A++  V +SRW G SKMPSAAVTRT+P LE+
Sbjct: 258 ---LLGFLCTMGIRVSRAKKIQVMMERDANDGEVFESRWFGGSKMPSAAVTRTLPELES 307

[Close]

BLAST of Lsi07G006930.1 vs. TAIR10
Match: AT3G08600.1 (AT3G08600.1 Protein of unknown function (DUF1191))

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-35
Identity = 96/292 (32.88%), Postives = 158/292 (54.11%), Query Frame = 1


Query: 24  SLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQAN-LPANLSGMEVSVVRLRSRRLWDK 83
           S   + S S+DA LQ+ +F+ L+R  P TG LY+A  +P+NL+G++++ +RLRS     +
Sbjct: 28  SPNASSSSSLDALLQDYSFRALLR--PRTGILYEATTVPSNLTGIKLAAMRLRSGSFRKR 87

Query: 84  GAN-FSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSN 143
           G   F+ F IPS  +  P+V RLV+VYQ+  N+S  Y+ + G+  + PV+G + ++A  N
Sbjct: 88  GVTPFNEFSIPSGVIVKPYVTRLVLVYQNLANFSHLYYPLSGYDYVAPVLGLLAYDA-KN 147

Query: 144 TETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEEGMFHLTQMGSP-DVCYS 203
               N+ +L +    + I I F +L+ R+ + S+  C  FD +G    +    P + C +
Sbjct: 148 LSALNLPQLDLRVSNDPIRIDFSDLE-RIPQGSSAKCVRFDSKGEASFSDSIQPGNTCET 207

Query: 204 RKQGYFAVV----------------SKLKRK-----KKTWYFWVIGFVLGVGGLVVAGYA 263
             QG+F+VV                SK K+K      KTW   ++G V  VGGL++ G  
Sbjct: 208 EHQGHFSVVVKSVASAPSLAPPGIESKKKKKSSDSNSKTWI--IVGSV--VGGLILLGLL 267

Query: 264 AMVTIRA---LKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLE 289
             + +R     K +K++ ME+  +    L+   VG ++ P+A  TRT P+LE
Sbjct: 268 LFLVLRCRNYKKQEKMREMERAGETGEALRMTQVGETRAPTATTTRTQPMLE 311

[Close]

BLAST of Lsi07G006930.1 vs. TAIR10
Match: AT4G01140.1 (AT4G01140.1 Protein of unknown function (DUF1191))

HSP 1 Score: 121.3 bits (303), Expect = 9.8e-28
Identity = 86/294 (29.25%), Postives = 157/294 (53.40%), Query Frame = 1


Query: 9   FIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANLSGME 68
           F+F + S  L   VH +  N+   +D  ++  A +   R   +TG+LY  +LP+NLS ++
Sbjct: 13  FVFCIIS-NLQTMVHCI--NNISDLDDLIRSYAARATTR--RHTGSLYDVSLPSNLSDIK 72

Query: 69  VSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFG-NWSSSYFKI-PGFSL 128
            SVV +R+   W KG NFS   IP      P+ +R+  V++ FG N SS YF++   +S 
Sbjct: 73  ASVVTVRNSIFWRKGTNFSGVLIPPMVKTSPYAKRIAFVFESFGDNSSSVYFRLADNYSF 132

Query: 129 LTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEEGM 188
           ++PV+GF  ++AT+  + K +  LSI   +  I I F     R    S   C  F + G+
Sbjct: 133 VSPVIGFTGYDATNTNDLKKL-NLSIKR-DKPILIKFDPHASR--DRSKVKCIVFGDNGL 192

Query: 189 F--HLTQMGSPDVCYSRKQGYFAVV----SKLKRK------KKTWYFWVIGFVLGVGGLV 248
                  + + +   +   G++A+V     K+K K      ++ W+ W++  + G+G  V
Sbjct: 193 LLNISNTIRNYECATTNSHGHYALVVLNQEKVKPKHEPVLVRRNWW-WIV--LTGIGVSV 252

Query: 249 VAGYAAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLE 289
           +     +V+++ ++ K+++ ME+++++   + + W+G S+MP+A + RT P LE
Sbjct: 253 IVVVVIIVSVKLVRKKRLRDMERESEKSETIGNVWIGRSRMPAATMVRTQPCLE 294

[Close]

BLAST of Lsi07G006930.1 vs. NCBI nr
Match: gi|449464100|ref|XP_004149767.1| (PREDICTED: uncharacterized protein LOC101207860 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 4.0e-148
Identity = 268/289 (92.73%), Postives = 274/289 (94.81%), Query Frame = 1


Query: 5   MNWNF-IFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPAN 64
           MN NF I LVFS T CPFVHSLQGNDSISMDAFLQETAFKTLVR RPYTGALY+A+LPAN
Sbjct: 1   MNKNFMIVLVFSVTFCPFVHSLQGNDSISMDAFLQETAFKTLVRRRPYTGALYRASLPAN 60

Query: 65  LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPG 124
           LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPG
Sbjct: 61  LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPG 120

Query: 125 FSLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDE 184
           FSLLTPVVGFMVFNATSNTE KNITKLSITT+ENRIEIHFPNLKL LGKSSN WCAEFDE
Sbjct: 121 FSLLTPVVGFMVFNATSNTEAKNITKLSITTLENRIEIHFPNLKLPLGKSSNTWCAEFDE 180

Query: 185 EGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVT 244
           +GMFHL  MGS +VCYSRKQGYFAVVSKLKRKKKTWY WVIGFVLGVG +VVAGYAAMVT
Sbjct: 181 DGMFHLIPMGSLEVCYSRKQGYFAVVSKLKRKKKTWYLWVIGFVLGVGVMVVAGYAAMVT 240

Query: 245 IRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLENSSF 293
           IRALKTKKIQIMEKQAD DLVLQSRWVGNSKMPSAAVTRTMPVLENSSF
Sbjct: 241 IRALKTKKIQIMEKQADGDLVLQSRWVGNSKMPSAAVTRTMPVLENSSF 289

[Close]

BLAST of Lsi07G006930.1 vs. NCBI nr
Match: gi|659102490|ref|XP_008452161.1| (PREDICTED: uncharacterized protein LOC103493266 [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 6.8e-148
Identity = 265/289 (91.70%), Postives = 274/289 (94.81%), Query Frame = 1


Query: 5   MNWNF-IFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPAN 64
           MN NF I LVFSFT CPFVHSLQGNDSISMDAFLQETAFKTLVR RPYTGALY+A+LPAN
Sbjct: 1   MNKNFMILLVFSFTFCPFVHSLQGNDSISMDAFLQETAFKTLVRRRPYTGALYRASLPAN 60

Query: 65  LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPG 124
           LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKI G
Sbjct: 61  LSGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKISG 120

Query: 125 FSLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDE 184
           FSLLTPVVGFMVFNATSNTE KNITKLSITT+ENRIEIHFPNLKLRLGKSS+ WCA+FDE
Sbjct: 121 FSLLTPVVGFMVFNATSNTEAKNITKLSITTLENRIEIHFPNLKLRLGKSSDTWCAQFDE 180

Query: 185 EGMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVT 244
           +GMFHL  MGSPDVCYSRKQGYFAVVSKLKRKKK WY W+IGFVLGVG +VV GYAAMVT
Sbjct: 181 DGMFHLIPMGSPDVCYSRKQGYFAVVSKLKRKKKAWYLWMIGFVLGVGVMVVTGYAAMVT 240

Query: 245 IRALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLENSSF 293
           IRALKTKKIQIMEKQAD DLVL+SRWVGNSKMPSAAVTRTMPVLENSSF
Sbjct: 241 IRALKTKKIQIMEKQADGDLVLESRWVGNSKMPSAAVTRTMPVLENSSF 289

[Close]

BLAST of Lsi07G006930.1 vs. NCBI nr
Match: gi|700198220|gb|KGN53378.1| (hypothetical protein Csa_4G050820 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 1.0e-135
Identity = 244/260 (93.85%), Postives = 250/260 (96.15%), Query Frame = 1


Query: 33  MDAFLQETAFKTLVRCRPYTGALYQANLPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP 92
           MDAFLQETAFKTLVR RPYTGALY+A+LPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP
Sbjct: 1   MDAFLQETAFKTLVRRRPYTGALYRASLPANLSGMEVSVVRLRSRRLWDKGANFSHFGIP 60

Query: 93  SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTETKNITKLSI 152
           SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTE KNITKLSI
Sbjct: 61  SNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGFSLLTPVVGFMVFNATSNTEAKNITKLSI 120

Query: 153 TTIENRIEIHFPNLKLRLGKSSNRWCAEFDEEGMFHLTQMGSPDVCYSRKQGYFAVVSKL 212
           TT+ENRIEIHFPNLKL LGKSSN WCAEFDE+GMFHL  MGS +VCYSRKQGYFAVVSKL
Sbjct: 121 TTLENRIEIHFPNLKLPLGKSSNTWCAEFDEDGMFHLIPMGSLEVCYSRKQGYFAVVSKL 180

Query: 213 KRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTIRALKTKKIQIMEKQADEDLVLQSRWVGN 272
           KRKKKTWY WVIGFVLGVG +VVAGYAAMVTIRALKTKKIQIMEKQAD DLVLQSRWVGN
Sbjct: 181 KRKKKTWYLWVIGFVLGVGVMVVAGYAAMVTIRALKTKKIQIMEKQADGDLVLQSRWVGN 240

Query: 273 SKMPSAAVTRTMPVLENSSF 293
           SKMPSAAVTRTMPVLENSSF
Sbjct: 241 SKMPSAAVTRTMPVLENSSF 260

[Close]

BLAST of Lsi07G006930.1 vs. NCBI nr
Match: gi|567893862|ref|XP_006439419.1| (hypothetical protein CICLE_v10024134mg [Citrus clementina])

HSP 1 Score: 332.4 bits (851), Expect = 7.9e-88
Identity = 159/285 (55.79%), Postives = 206/285 (72.28%), Query Frame = 1


Query: 5   MNWNFIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANL 64
           M WNF+ L+ S  L  FVHSL  N + S+D  LQ+ AF+TL+R RP+TG LY A LPANL
Sbjct: 1   MTWNFMCLILSLFLSQFVHSLNNNTTDSLDTCLQDFAFRTLIRHRPHTGNLYNAMLPANL 60

Query: 65  SGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGF 124
           SGM VS+VRLRSRRLW++GANF +F IPS T+PVPHV+RL +VY DFGNWSS Y+ +PG+
Sbjct: 61  SGMSVSIVRLRSRRLWNRGANFCNFHIPSRTIPVPHVKRLALVYHDFGNWSSHYYTVPGY 120

Query: 125 SLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEE 184
           S++TPV+GF VF+A SN  ++++ KLS+ T+   I I F N  L  G  S   CA F   
Sbjct: 121 SMITPVIGFKVFDA-SNMMSRSVKKLSLNTMGKPIVIRFSNSTLSDGMVSKARCAIFSSN 180

Query: 185 GMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTI 244
           G  HL ++   +VC+S+ QG+F++V  LKRK+  W  W IG VLG+GG ++ GY  + ++
Sbjct: 181 GTLHLGEITLANVCFSQDQGHFSIVVPLKRKRGQWKLWAIGIVLGIGGFILIGYVVIASV 240

Query: 245 RALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLEN 290
           + LK KKIQ+MEKQADEDLVL + WVG SKMPSA VTRT P LE+
Sbjct: 241 KVLKAKKIQVMEKQADEDLVLDTIWVGRSKMPSATVTRTQPTLED 284

[Close]

BLAST of Lsi07G006930.1 vs. NCBI nr
Match: gi|985446153|ref|XP_015385196.1| (PREDICTED: uncharacterized protein LOC107176762 [Citrus sinensis])

HSP 1 Score: 332.0 bits (850), Expect = 1.0e-87
Identity = 159/285 (55.79%), Postives = 206/285 (72.28%), Query Frame = 1


Query: 5   MNWNFIFLVFSFTLCPFVHSLQGNDSISMDAFLQETAFKTLVRCRPYTGALYQANLPANL 64
           M WNF+ L+ S  L  FVHSL  N + S+D  LQ+ AF+TL+R RP+TG LY A LPANL
Sbjct: 1   MTWNFMCLILSLFLSQFVHSLNNNTTDSLDTCLQDFAFRTLIRHRPHTGNLYNAMLPANL 60

Query: 65  SGMEVSVVRLRSRRLWDKGANFSHFGIPSNTLPVPHVRRLVIVYQDFGNWSSSYFKIPGF 124
           SGM VS+VRLRSRRLW++GANF +F IPS T+PVPHV+RL +VY DFGNWSS Y+ +PG+
Sbjct: 61  SGMSVSIVRLRSRRLWNRGANFCNFHIPSRTIPVPHVKRLALVYHDFGNWSSHYYTVPGY 120

Query: 125 SLLTPVVGFMVFNATSNTETKNITKLSITTIENRIEIHFPNLKLRLGKSSNRWCAEFDEE 184
           S++TPV+GF VF+A SN  ++++ KLS+ T+   I I F N  L  G  S   CA F   
Sbjct: 121 SMITPVIGFKVFDA-SNMMSRSVKKLSLNTMGKPIVIRFSNSTLSGGMVSKARCAIFSSN 180

Query: 185 GMFHLTQMGSPDVCYSRKQGYFAVVSKLKRKKKTWYFWVIGFVLGVGGLVVAGYAAMVTI 244
           G  HL ++   +VC+S+ QG+F++V  LKRK+  W  W IG VLG+GG ++ GY  + ++
Sbjct: 181 GTLHLGEITLANVCFSQDQGHFSIVVPLKRKRGQWKLWAIGIVLGIGGFILIGYVVIASV 240

Query: 245 RALKTKKIQIMEKQADEDLVLQSRWVGNSKMPSAAVTRTMPVLEN 290
           + LK KKIQ+MEKQADEDLVL + WVG SKMPSA VTRT P LE+
Sbjct: 241 KLLKAKKIQVMEKQADEDLVLDTIWVGRSKMPSATVTRTQPTLED 284

The following BLAST results are available for this feature:

BLAST of Lsi07G006930.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G006930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUZ4_CUCSA	7.1e-136	93.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050820 PE=4 SV=1	[more]
V4VJ37_9ROSI	5.5e-88	55.79	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024134mg PE=4 SV=1	[more]
A0A067G9Y3_CITSI	5.5e-88	55.79	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023060mg PE=4 SV=1	[more]
A0A0L9VQ18_PHAAN	2.2e-84	55.86	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g019800 PE=4 SV=1	[more]
A0A0S3QXJ9_PHAAN	2.2e-84	55.86	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G046500 PE=...	[more]

BLAST of Lsi07G006930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23720.1	2.6e-52	40.80	Protein of unknown function (DUF1191)	[more]
AT3G08600.1	4.8e-35	32.88	Protein of unknown function (DUF1191)	[more]
AT4G01140.1	9.8e-28	29.25	Protein of unknown function (DUF1191)	[more]

BLAST of Lsi07G006930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464100\|ref\|XP_004149767.1\|	4.0e-148	92.73	PREDICTED: uncharacterized protein LOC101207860 [Cucumis sativus]	[more]
gi\|659102490\|ref\|XP_008452161.1\|	6.8e-148	91.70	PREDICTED: uncharacterized protein LOC103493266 [Cucumis melo]	[more]
gi\|700198220\|gb\|KGN53378.1\|	1.0e-135	93.85	hypothetical protein Csa_4G050820 [Cucumis sativus]	[more]
gi\|567893862\|ref\|XP_006439419.1\|	7.9e-88	55.79	hypothetical protein CICLE_v10024134mg [Citrus clementina]	[more]
gi\|985446153\|ref\|XP_015385196.1\|	1.0e-87	55.79	PREDICTED: uncharacterized protein LOC107176762 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010605	DUF1191

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G006930	Lsi07G006930	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G006930.1.CDS.1	Lsi07G006930.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G006930.1	Lsi07G006930.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010605	Protein of unknown function DUF1191	PFAM	PF06697	DUF1191	coord: 30..285 score: 1.5
None	No IPR available	PANTHER	PTHR33512	FAMILY NOT NAMED	coord: 1..292 score: 8.4E
None	No IPR available	PANTHER	PTHR33512:SF4	SUBFAMILY NOT NAMED	coord: 1..292 score: 8.4E