Lsi06G015800.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G015800.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	UPF0329 protein ECU01_0100/ECU01_1510/ECU08_0030, putative isoform 2
Location	chr06 : 26216297 .. 26217664 (-)
Sequence length	1073

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATATCAGATTCTCAACTCCAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATATAAAATGACAGCCATTCACGAGCCTCATAGACGGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAACACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAAACTCCACATCAAACACATCTCTCTCCCTTATTTCCTGTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAAGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGACTATGATCTCATCTTAAAATCTTATTTTCCCTTTGTTTCTGAATTTTTTGTTGATTGTCTTTCAATTCACTAGTTTAAGCTCATGATTAGAGATTAATGAAGGCTAGCAAAAAACTAAGACTGGAAAAATTCAATAAATGAACATTAGATCTTCCATCACTAACAGGCACTCTAATCATTTGCTTTGATAGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGATAGAACCTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAAGTAGGCATGAAAACAGAATTTTCAATACCACATTAGAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

mRNA sequence

CACATATCAGATTCTCAACTCCAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATATAAAATGACAGCCATTCACGAGCCTCATAGACGGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAACCAAGTAGAGCAAGGGATAAACACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTACAAACTCCACATCAAACACATCTCTCTCCCTTATTTCCTGTCTATAAGACCAGCTTCAAAAACTTACTCAATAACCCAGAAAAGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

Coding sequence (CDS)

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGAGATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGAGGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATACAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAAATTAAGAACAAATAATGAAATGCCAATTGGAACTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGGTAAACATTCTTGTTCTTTAG

Protein sequence

MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKCVQEGCYLCPFQPKCYSHYHFVGMVQKVNILVL

Homology

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BLAST of Lsi06G015800.1 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.5e-99
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETFHKCVC 217

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BLAST of Lsi06G015800.1 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 1   MGVCSSKDGS--DICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ GT   + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIM 202
           LK Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIM 208

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BLAST of Lsi06G015800.1 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 1   MGVCSSKDGS--DICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ GT   + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIM 202
           LK Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIM 208

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BLAST of Lsi06G015800.1 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 119/207 (57.49%), Postives = 153/207 (73.91%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+R+L+EE++ +M E +KE++ +E+D++VF FKEA WK
Sbjct: 1   MGGSGSKSERRCSEKYVMNLKEKVRVLQEEIKEMMYEREKESRGYERDIMVFTFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARR 120
            E KRL+EEVK LRK V+   E I E+E G   +K+  EWE+ GT   + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRKVVEEKDEKIREMEVGLMEKKSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E L+ ELQ KEET KALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENDIQMENLRRELQEKEETTKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIM 202
            Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIM 206

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BLAST of Lsi06G015800.1 vs. TrEMBL
Match: I1LAN6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-49
Identity = 121/207 (58.45%), Postives = 151/207 (72.95%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+RLL+EE++ +M E +KET+ +E+D++VF FKEA  K
Sbjct: 1   MGGSVSKSRRMSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRRYERDIMVFTFKEADSK 60

Query: 61  TEKKRLKEEVKMLRKKVKES---ITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARR 120
            E KRL+EEVK LR  V+E    I EIE G   + +  EWE+ GT   + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKNSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E LK ELQ KEETIKALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENGIQMENLKKELQEKEETIKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIM 202
            Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIM 206

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BLAST of Lsi06G015800.1 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein)

HSP 1 Score: 107.8 bits (268), Expect = 9.6e-24
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG-- 60
           MG C+SK        + +G++      +++ RG    + KE    EK M +   KEA   
Sbjct: 1   MGGCTSKQ-------ERRGVRSVKETSKDQSRG-RRHLIKERDEREKVMFL-QLKEAERE 60

Query: 61  WKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRD 120
           W+ E+K+L+EEV+ LRKK++E   E +     E+   +W        + E++  ERA RD
Sbjct: 61  WRKERKKLREEVRRLRKKLEER-EEAKTTTTEEREYWKW--------VVEEMCVERAVRD 120

Query: 121 EAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTEA-----LKTELQAK 180
           EA+EKWKQLY AIK ELD LI  T +  G       L     E TEA     L+ E++ K
Sbjct: 121 EAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRVK 180

Query: 181 EETIKALKEQVVSMEQEKYKRNREIDILRQSLRIM 202
           EET++ L+EQ+V M+++KY++ REID+LRQSLRI+
Sbjct: 181 EETVETLEEQIVLMDRQKYEKEREIDLLRQSLRIL 197

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BLAST of Lsi06G015800.1 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 79/199 (39.70%), Postives = 116/199 (58.29%), Query Frame = 1


Query: 9   GSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKRL 68
           G    +D+    K +I++   E R      +   +  EK+ V+ A K  E  W+ E+KRL
Sbjct: 2   GGSTSKDERNSSKRRIKVKANEQR----RRETRRELDEKERVILALKMAETEWRKERKRL 61

Query: 69  KEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEAIEKWKQ 128
           +EEVK LR+K++E     EEG   +    EWE       + EQ+  ERA R+EA+E+WKQ
Sbjct: 62  REEVKRLRQKMEEK----EEGKAKQH---EWEW------VVEQMCLERAVREEAVERWKQ 121

Query: 129 LYHAIKIELDDLIQRTHNGDGLYWGATER----TEALKTELQAKEETIKALKEQVVSMEQ 188
           LY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK ++  ME+
Sbjct: 122 LYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLKGRINLMEK 181

Query: 189 EKYKRNREIDILRQSLRIM 202
           ++  + REID+LRQSLRI+
Sbjct: 182 QQNGKEREIDLLRQSLRIL 182

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BLAST of Lsi06G015800.1 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 5.0e-99
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETFHKCVC 217

[Close]

BLAST of Lsi06G015800.1 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 4.3e-98
Identity = 192/220 (87.27%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARRDEA 120
           TEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEMEGTPN+IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNREIDILRQSLRIMTKLRTNNEMPIGTVTSCKC 221
           EQ+KYKRNREIDILRQSLRIMT   +  E  I T   C C
Sbjct: 181 EQDKYKRNREIDILRQSLRIMT---SKKEQQIETSHKCVC 217

[Close]

BLAST of Lsi06G015800.1 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max])

HSP 1 Score: 209.9 bits (533), Expect = 5.1e-51
Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 1   MGVCSSKDGS--DICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAG 60
           MG   SK G      E  V  LKEK+RLL+EE++ +M E +KET+++E+D++VF FKEA 
Sbjct: 1   MGGSVSKSGMRRKSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEAD 60

Query: 61  WKTEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERA 120
           WK E KRL+EEVK LR  V+   E I EIE G   + +  EWE+ GT   + EQ+++ERA
Sbjct: 61  WKQEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERA 120

Query: 121 RRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKA 180
           RRDEA+EKWKQLY AIKIELD+LIQRT++GDGLYW A E   + E LK ELQ K+ETIKA
Sbjct: 121 RRDEAVEKWKQLYLAIKIELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKA 180

Query: 181 LKEQVVSMEQEKYKRNREIDILRQSLRIM 202
           LK Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 LKTQLLSMEKEKYKKEREFDLLRQSLRIM 208

[Close]

BLAST of Lsi06G015800.1 vs. NCBI nr
Match: gi|1012362388|gb|KYP73571.1| (hypothetical protein KK1_006214 [Cajanus cajan])

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 119/207 (57.49%), Postives = 153/207 (73.91%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+R+L+EE++ +M E +KE++ +E+D++VF FKEA WK
Sbjct: 1   MGGSGSKSERRCSEKYVMNLKEKVRVLQEEIKEMMYEREKESRGYERDIMVFTFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKKVK---ESITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARR 120
            E KRL+EEVK LRK V+   E I E+E G   +K+  EWE+ GT   + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRKVVEEKDEKIREMEVGLMEKKSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E L+ ELQ KEET KALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENDIQMENLRRELQEKEETTKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIM 202
            Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIM 206

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BLAST of Lsi06G015800.1 vs. NCBI nr
Match: gi|947084820|gb|KRH33541.1| (hypothetical protein GLYMA_10G130200 [Glycine max])

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 121/207 (58.45%), Postives = 151/207 (72.95%), Query Frame = 1


Query: 1   MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG   SK      E  V  LKEK+RLL+EE++ +M E +KET+ +E+D++VF FKEA  K
Sbjct: 1   MGGSVSKSRRMSSEKYVMNLKEKVRLLQEEIKEMMYEREKETRRYERDIMVFTFKEADSK 60

Query: 61  TEKKRLKEEVKMLRKKVKES---ITEIEEGNFGEKTATEWEMEGTPNSIFEQIQQERARR 120
            E KRL+EEVK LR  V+E    I EIE G   + +  EWE+ GT   + EQ+++ERARR
Sbjct: 61  QEGKRLREEVKQLRSLVEEKDEKIREIEVGMMEKNSEKEWELMGT-KLLVEQMKEERARR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATE---RTEALKTELQAKEETIKALK 180
           DEA+EKWKQLY AIK ELD+LIQRT++GDGLYW A E   + E LK ELQ KEETIKALK
Sbjct: 121 DEAVEKWKQLYLAIKTELDELIQRTYDGDGLYWKAEENGIQMENLKKELQEKEETIKALK 180

Query: 181 EQVVSMEQEKYKRNREIDILRQSLRIM 202
            Q++SME+EKYK+ RE D+LRQSLRIM
Sbjct: 181 TQLLSMEKEKYKKEREFDLLRQSLRIM 206

The following BLAST results are available for this feature:

BLAST of Lsi06G015800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G015800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS07_CUCSA	3.5e-99	88.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1	[more]
I1NEK7_SOYBN	3.6e-51	58.85	Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1	[more]
A0A0B2P7Y4_GLYSO	3.6e-51	58.85	Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1	[more]
A0A151U2S2_CAJCA	1.4e-50	57.49	Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1	[more]
I1LAN6_SOYBN	1.9e-49	58.45	Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1	[more]

BLAST of Lsi06G015800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23930.1	9.6e-24	39.53	unknown protein	[more]
AT4G13540.1	1.1e-22	39.70	unknown protein	[more]

BLAST of Lsi06G015800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440646\|ref\|XP_004138095.1\|	5.0e-99	88.64	PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]	[more]
gi\|659129099\|ref\|XP_008464528.1\|	4.3e-98	87.27	PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]	[more]
gi\|356575194\|ref\|XP_003555727.1\|	5.1e-51	58.85	PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]	[more]
gi\|1012362388\|gb\|KYP73571.1\|	1.9e-50	57.49	hypothetical protein KK1_006214 [Cajanus cajan]	[more]
gi\|947084820\|gb\|KRH33541.1\|	2.8e-49	58.45	hypothetical protein GLYMA_10G130200 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G015800	Lsi06G015800	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G015800.1.CDS.3	Lsi06G015800.1.CDS.3	CDS
Lsi06G015800.1.CDS.2	Lsi06G015800.1.CDS.2	CDS
Lsi06G015800.1.CDS.1	Lsi06G015800.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G015800.1.five_prime_UTR.1	Lsi06G015800.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G015800.1	Lsi06G015800.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 10..37 score: -coord: 56..83 score: -coord: 121..141 score: -coord: 156..183 scor
None	No IPR available	PANTHER	PTHR37226	FAMILY NOT NAMED	coord: 2..201 score: 3.6