Lsi06G007780.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007780.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	T27c4.14 protein isoform 2
Location	chr06 : 15432603 .. 15446230 (+)
Sequence length	744

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTATATTATTTGGAAAAAGATTCATTGATAAAATGATATGTAGAATGAGATGAAATCTTATAAAAGTGCCAGTCTACATATAACCCCTCTACTACGGGTACAAGGTGTTGACATAGAATAATTACAAAAATTAGTATGTAAAGATATCCAAGATGTAAAATTTATCTATTTGTTTCTTGGAAGGCTTCTATTCCTTTTAAGTAGATTTCCTGAAAGAAAATCTCGGAAGTCATTTGGCCATAACATTTTAGCATTTTTCTCGAAAGGATACTAACACAAAACACGATGAAAGAATCGATTGTTTCTCTTTTTTGGTTGTCTTGGCTAAAGCGGTGACACAAAAGAACAACAGACAAAAAGATGATTGCTGCTCTTTAACCTTTCTACATGGCACACACTGCCCGTGGGATACTGTAAGAAAGGATGTCAGATAAAACAAAAGGGCCTGGAGGACACAATTGTATTGGCTTTTGCTGAATAATTTTAAGGTTTTTTTTGTTTAGGTTTATTTTTCATTTTAATGTTGTACGTGGATACTTTTCCTTTTTCGTTTTTATTTTTTTAGGCAGACACGATTAAATTAAAAAGAAACATCATTTTTCATGGATGAATTGAAAAATTACATAATAGCAATTAGCGTCGAACAGAAAAAACTAAATTACAAGACTCTGAACCAAATATACATGACAAGAAACATATCTCATTTCTTAGATCATATGAAATTAGAGAAAAAAGGGAGGAAATCCAAACCCCTAGCCAAGGAAGTTACAAAAACCTTTTCCAATTTGCACAGAAAAAGATAGGCTGCAAGGTTTGTTAAGAGCATAAAATTTACCCCATGCAAACCCAATCATAAGGTTATGATCCAGAAGACTATCTATAGATCTAGCCTTACTATTGATTATTGAAGAGTTTGCTCACTGTTACTTTTTCTATTCTAGGAAATAAAAAAAATGCCCTCACAAGCTTCTAGTTAAACAGCATAGTTGTTATTTCTACTTCTAATAGTTTTTATGCTGTATCCATTTGTTTATTTGAGCCAATGTTTTGGTGCAGTCAGTTGTATGGTTTCTATCAAGATGGTCATCAACATATTTACTTCACCCTGAAGAAATCATCACTACTAACTGCAATTATGGTAAAGAACATGATAATAAGTTCCAGTCACAGCAAACCAGGAAAGTCATTTACAGCTTTTTTGGAGAACACGGCCAAGGAATTCCTATACTTGATATTATTATTCGCATATCAGCAACTACACTTTTGTCTTATCCTGGGGAAAAAGACTTGCATGTATGGGTTTCCTCTTCAATTTTCAATGCTGCTTCAATTAGATTGAACTTTTCATCATTGGTGATAATCTCGTTATGTACAATTATTTATTGTTGATTTTACAAGACTTAGATACTTCTCATTGATCTCTATACAAATGTACAATCCTAAATATAAAGGGAGAGAATTTTGCCAAATAAGGCAATACACTAACGGTAACAAGGAGAAAAGAAAGATAGGATCGAAATTGTACTCTATAATTTAGAGAATAAATCTAAAATATATTATTCATAAGACTTAAGTTACATATACATATATATATATATATATATATATATAGGAGCCCTAGAAACCCTAATCTAGAGAATATCAACTTACAATAAAGGACAATATACGTTAAAGTACATATTATAACACTCCCCCTCAAGCTGGAGCAAATATGTCAATCATGCCCAGCTTGTTACTTAGTTTATTCTTGCTCCGTTCACAACTTTGGTAAGAATATCACCCAACTATTCTCCAGTCTTCACATATCCTGTAGATATCATTCTTTCTTGTATTTTCTCACGAATGAAATGACAATCCACTTCAATATGTTTAGTTCGTTCATGAAACATTGGGTTGGATGCAATGTGCAGAGCAGCTTGATTATCACACCATAATTTAGCTGGCACGGTAACGCTGAAGCCCATCTCAAATAAAAGTTGGTGTATCCACATTATCTCACACACAGATTGTGCCATAGCTCTATATTTGACTCCGCACTCGAACGTGAAACTACATTCTGTTTCTTACTCTTCCACGACACTAAGTTTCCTCCAACAAAAATGCAATATCCAGTCGTCGATCTCCTATCTTCTCGAGATCCAGCCCAATCAGCATCTGAAAAACACTCAACCCTTGTGTGATCATGATCTTTATATAAGATCTCACGTCCAGGTGCAGCTTTCAGATAACATAAAATTTGTTATACTACAGCCCAATGATCTATTGTAGGAGAAGACATAAACGGACTCATTATACTCACAACATAAGCAATGTCTGGTCGTGTCACTGTCAAGTAGTGTTCAACTTTCCAACTAGTCTTTTATATCTCTCAGGGTCTTTAAATAATTCACCTTCTTTAGCAAGTAGCAATTTTGGTATCATCGGAGTATTACATGGTTTGACTCTTAGTTTTCCAGTCTCAGACAATAATCAAGTACATATTTTCGTTGTGATAGATAAATACCTTTCTTGCTCCTCATTACTTCAATACCTAAGAAATATTTCAATTCTCCTAAATCTTTAGTATGAAACTGACCCTGAAGAAAAGTTTTAAGAGAAGATATACCTGATACATTATTACCAGTGATAACGATATCATCAACATACACAACTAGCAAAGTAATACCACTATCAGATCGTTGATAAAATACAAAATGATCAGACGTACTTTTCTTCATACCAAAACATTCGAGGGCTTGACTAAACTTACCAAACCATGCACGAGGGCTCTGTTTCAGTCCATACAAAGATTTTCGAAGTCAACACACTTTATCATTCTCCCTCTGAGCAACAAACTGATAGGTATCCCTATCAATATATTTTTTTATAACTTTGAAAGTAAGTAGATAAAAGATACACCCATCCACAATCTCCCCTCTCCAGAGAGAAAGTTCCTCCTAATACATAAAAACCAGATAAAAACTAACTACAACACACACAAACATATATATAACTAAACAATCGTATAAAATAACTAATAATAACTTAATTATTTAACTACTGGTTGATGCTTCCCCTTCTTTAACTATCTCTTTCCCTTTCTTATTTTTCCTGACATATGTGATCAATGTTGGTGGTCTAACAATACCGCCCCCTTCCAAAGTCAACTTGTCCTCAAGTTGAAACAAAGGAAATTGACAACGAAAGTCCTCAAGAATCTCCCAAGTAGCTTCGAACGGGCAAACCCTTCCAACACACCAAGATTTCCTGAGAATGAGTGATGGGATTCTGACGGATACCACTAACAAATGTTGGTTCCAATATCCACTCATACATATCAGAGAGTTGTGGGGGTAACGGTTGAACTGACTGTCCCGATCCAACAACTTTCTTCAATTGAGAAAGATGAAACGCAGGATGAATAGTGGCCTCGGAAGGTAAATCAAGTTTATATGCTAACAATCCCACCTTGGCCAATACTTTATAAGACCCAAAATATTTTGCTGCCAATTTCTCATTTCTCCTTTTTGCGAGAGATACCTGACGATAAGGTTGAACCTTCAAAAACACCCAATCCCCCACTTGGAATTCAACGTCACGCCGCTTCTGATCTGCATACTTCTTCATTCGCTCCTGTGACACCCGCAAATGTTCCTTCATCATATCAAGAGCAATATCACGTTCCCTGAGTTCCTGATCCAGTGTCGAATTAGAGGTACACTCAGCTCCATAGTAAATCAAAGTAGGTGGAACGCGACCATAAACCGCTTGAAAAGGTGTGATGCCAGTAGAGATATGGTAAGTAGTGTTATACCAATATTCGGCCCATGGCTACCAACGAATCCATTCCTTAGGGCGTTCGCTACAGAAACACCGTAAATAAGATTCCAAACAGCGATTTACTACCTCCGTTTGTCCGTCAGTTTGTGGATGATAGGTTGAACTGTGATGCAAACGGGCACCTGTAGCACGAAATAATTCTTGCCAAAAATGACTAAGAAAAATTTTGTCGCGATCAAACACGATAGATCTAGGGAACCCATGCAAACAGACCACTTCCTTGATAAATATGTCGGCCACATCTTTTGCTGTAAATGGGTGTTTCAAAGCTATAAAATGCCCATATTTACTCAACCGATCTACCACCACCAGCACCGAATCATACCTTTTGGCTTTAGATAGTCCCTCCACAAAATCCATGGAAATATCACTCCAAATTGTAGTAGTTATTTCTAATGGCAGCAATAACCCAACTGGACTCAAAGTCAATGTTTTATTTCTCTGGCAAGTCACACATTCCTCGACATACTTCTGAACATCGGTCTTCATTCTCTCCCAATATAATTCCCCCAATAATCGCTTGTAAGTACGCAAAAATCCAGAATGTCCTCCAAACACATAATCATGATAGGTATGCAATATTGTAAGAATCAAAGTGGAGGATTTTTCATTAAATATAACCAAGTCACACGAGTATAATTGTCAACAAAAGTAACAAAATAACGAAAAACCAGTTTGGGACACAACAGGACAAGGACCCCAAATATCAGAGTGAACTAACTCAAATGAGCACTAGCTGGTTTATCGACTCTAGGACTAGAACTAAGATGATGAAATTTAGCAAACTGACACGAGTCACAATTTAAAGACGACAAAGAACAAAATTCGGGATAAAGTTTCTTCAACACGAACAACGATGGATGACCTAAACGACAATGAACTTCAAACGGGGTTGTAATTCTAGAACAAGCCACAACTGTCGGGATCTGGTGGTAAAAAGGTAAAGGCCTCCTGGCTCATGTCCTCTACCAATAATCTTCTTTGTCACACGATCCTGAAACAAGCAATAACCAGGAAAGAACGAGACAAAACAGTTAAGGTCACGAGTAAGTTGGCTAATAGAGATAAAATTAAAAGACAATTGAGGCATATGTAACACAGAGGACAAAGAGAGGGATGAGGTGAGATGAATGGTGTCAGAGCCAAGGATAGAAGAGGTTGAGCCATCTGCCGAAGTTACAGATGGGGATGAGGTAGGAGGCAAGCTAGAAAACAAGTTAGAATTACCTATCATATGAGCAGTGGCACCAGAGTCTATGACCTATTTGGTAGATGATGTAAGGAGACATTTTGTATTACCTGTCTCAGCAATGATGGCCATAGGAGTCGATGAAGAAGATGGCTGTAGGGATTCCTGGAATACTTGGAATTTAGCAAATTCGTCGGCAGAGATAGTAACAGACTTCTCAAGAATATCAGTGGTGGAAGCTATCTGAGCATGCTGAGATCTCTGGGTCTTATACAGCAGCTTTCGACAATTACGTTTCAGATGACCTGGTTTACAACAGTAATGACAAACGATCTCATGAGAATCTGATTTCTGACTATCATAGGTAGGCTTTTGAAAATTGTTTGTCATCCCTAAAGTAGCTCGAGAGTGATCATTCTTGCCTATAAGACCACTGCTCGGTTGAGACACAGACGAACCAAATTGAGAACTCTCAATATGAAGAACACGACTGAAGGTGTCATCTATGAAGAAGATGCCTGTTGGCATTCCTGGAATACTTGGAATTTAGCAAAGTCGTCGGCAGAGATAGTAACAAACTTCTCAGGAATATCAGTGGTGGAAGCTATCTGAGCATGCTGAGATCTCTAAGTCTTATACAACAGCTTTCAACAATCACGTTTCAGATGACCTGGTTTACAACAGTAATGACAAATGGTCTCCTGAGAATCTGATTTCTGACTATCATAGGTAGACTTTTGAAAATTGTTCGTCATCCCTAAAGTAGCTCGAGAGATCATTCTTGCCTGTAAGACCACTGCTCGGTTGAGACACAGACGAACCAGATTGAGAACTCTCAATATGAAGAACACGACTGAAGGCATCATCTAGCGATGGAATGTCAGAATCAGAGAGAATATGTATTTTAGCCATGCCAAATTCAGGTGAAAGCCTATTAAAAAATATCATAACAGCTATCTTTTCTCGTTGAGCTTGTTGAACTTTGACATCAGGGCTAAAGGGTAATAACAAAGCAAGTTCTGCAGCTATCTTTTTAAATCTCATAAAGTAGCTTGTAACAGATTCTGATTTCTGTTCGACTCGAAAATATTGCATGCAAACGTCAAACATCTGATGGACGTGTTCTTTCCCAGAGTAAAGAAATTGCAAGAACCCTAAAAGTTCCTTCACAGAATTACAATGATTCATCAAGCCAACAACCTCACTCTCAGTGGAGTTCTTAATATGAAGATAAAGGCGAGCGTCATCGTGAAGCCAACCTTTTTTTGTATCATCCGTCGGTGGATCCTCAGTCACATGATCATCCATATCAGTACTAAGTAAGTAAAACTGAATCGTTCGTCGCCAATCATAGTAATTAGATCCATTCAACTTGTGTTTGGTGATCTTTGATGTTAAGGGAAGTACATTAGACACCACCATATGCTTTGGTTCAGCCATGACAAATTACTACACAATTGGTAGATCTCGAAAGTAGAATACCGACCAAAAAAGAGGATGACCCAAAGAGCCGAAATAACAAAACAACCCCAAAAAAGACCAAAAACAGTCAAAACCCCTAAGAACAAAAAGGGTATTTTCCTAATAACTTCACACTCGAGGGGATTTCAATGGAACCAAAGCCACAGACAGGTTGGAAACCAGAAGCCGAGACGAACCTAGCTGACGAAAGTCGAATCGGAACGTTCACGCGCTCCCACGCGCCGGCGCGTGACGGTGGGCAGAAAATTCCAGGCGGCGTGTGAGGCTCACGCACGGCTGTTTCCGGTGACTCACAAAGGCAAACGACGTCGGATGGTGGCGGCGCTTCTCCTGAGGTAGGTGGTGTCGACAAACGGCCACTCAAACTCGATGACCAAAACACCAAACCCTAACTTTATGAGAATATTGCCGTCAAACGAAAGTTCGAAATCCTAGAGGGGCTCTGATACCATGTACTCTATAATTTAGGGAATAAATCTAAAGTATATTATTCATTAGACTTAAGTTACATATATATATATATATAGGAGCCCTAGAAACCCTAATCTAGAGATTATGAAATTACAATAAAAGACAATATTCATTAAAATACATATTGTAACAGAAATAACTTGAAAGGAAATAGTACTTTGAAGAGAAAATAACTTTCCAAAAAGATAAGAAGAGGACTTTCCTATATTCCAACATTTGTAAATATCACCTCTCGATTCTTGAGGAGCTTTTCAAAGTAAATTTTAGTTACATTCTTGCTTACCATCAAACCAAGTTCAGAATCCCTGTCCCAAGCATGAATTCTTAAATATTCTTAATAGTGGTTTATGACAAGTCGAACTAGGGAAGCTTAAAATTCTGAATTAGTGTTATTTCAAGAACATTTATGGAAGGCAATGCTCTTCAGGCGTGAGCAGAAACGAGGACATGTATACCAAGATCAATTTGATAAGATTTAACTATAAAGTCTATACCAAGACAAGTTATCATGATCAGCAACTACACAAGGTCATGAGCAGACATTAAACCATGTATATACCTAAATATGTATACCAAGAAAAATGTGGAAGGCAATGCTCTTCACTCATGAGCTTGTAAAGAAGCATTTAAAGTGGACCAGAAACTCTTCTATTTCTTTCCAGCAAAATAAACTGTAAAACTATCATAGAATCAACATTTGTCAAAGAATCTGACCCTGTCTCCTGAAACGGGGGCTCAAAATGACATCTGAAATTTTTTAAACTACTCAACTTCTGAACAATGGCTAACCGAAATCCCAAAACCACTCAAACTTTGGTGGAAAAAGGGCATGACCACAGTAAACGCTATTTGCTGTTAGACAGATATGGTCACCACTTGCTAAGAGATGAAGAAATCGTACTGAATATTGATCATATAATATTGAATGAAAGATTTGAAAAAAGGCATGCTAGCATATGCTGTTTTCAAGTATAATTGTTTTTCTTAATCGATCATGTTGTGAAGCTGTTTTCTATTTATCATTCGTCCAATTATTTTGTTAAGACTAGCAAGTAAAAGGGAAAAGGGGCTAGAATACATCAATTTAGTAATTAAATATGGATATTGTTTTAGCATTTATTGTTTAGAACGTTTGTTGTGTAATAATTTTTGGAATTTAACAGGCACTCACATGTAACCAACTACTTCGTGCACTTGTTCGTCAGAAACATATTTGCAAACATCTTGTTACACTGGTGAGTTAGTGTCTGATATGGTAAAATAATTATCCATCTAATTTTATGGTGGTTGTCCATAGACATGAAGATATTCATCTCTTTGCTAGTTTGAAACTTCCTGTCATGGTCTTAATAATTCTTACAAGTGCATAATTGTTTCTGATGCTTGAATAAAAAATTGACCTTGTATTCTTGATTTTTGAACCAGAAATGTACTTTTCAAGTACATTGAAGTAATGAAAAAAAAAAACCCGAAGTTCAAAGGAAATTCTGGAAGGGTGCCAAAAAAGCACCCAAATTATTCAACAATAATCTATTTTCTAATATTCTTACATTTCATATTTTTATATCTTTAATTGAGTTAATGATTATTGCTTAACTCAATGAAAGATTACTTGTTCTAAGAGGATGCATGTTGCTTAAAATCTTAGTAAAACATGCCGACATAACTCAACGGTTAAGACATTTACTTCTTTCTTTGATGTCAGTGTTTCAAATCTCCACTCTCATATTGTTGTACTAAAGAAAAGGTCAAAGGGTTTCTTAAATAAAAGAAACTCCTATTACAAATAGGGAAATAATAATTACATAAGAAAAGAAAAAATACAGCAAATATAATCACACTAAATACAATGAGATATTGATAAAAAGGAAATAATCAACACTCCCCCTCAAGTTGTTGAATTGCCACTTTGGAAGACCTTTAGTTAACACATCTGCAATTTGTTATGTTGTCGGAAGATAGGGTATGCATATTATTTCAGCATCAATCTTCTATTTTATGAAATGTTTATCAACTTCAATTTGTTTTGTCCTATCATGAAGGACTGGATTGTGGGCAATGGAAATTGCTGCCTTATTATCACAATAAATGCGCATGGGGATCGTCTGATAAAATCTCAGCTCGTCAAGTATTCTTATCCATATGCCCTCACAAATACCATGGGCTAATGCCCCAAATTCTGCTTCAGCACTACTTCTCGCGACCACACTCTGTTTTTTACTTCGCCAAGTCACAAGATTTCCTCCAACAAAGGAACAATAACCAAAAGTGGATTTTCTATCAGTATTACTCTCTGCATCAGTGTAAACTTCGACATTCAGATGATTGTGCTTTCTAAATAATATGCCTTTTCCAAGAGTGCCTTTCAAGTATCTTAAGATTCTATAAACGGCATCAAAGTGTACTGATCCAGGAGCATGCATGAACTGACTGCAAAAGTAATGTCCGGATGTGTGTGTGAGAGAGATATATGAGTCTCCCCACAAGTCTCTGATACTTTTCTCTATCTTTGATCTCTTTTTCAGTTGCAGCTTCCAATTTCAAGTTTTGCTCAATGAGTGTCTGCGACCTTGCAACCAAGTAAACCTGTCTCTTTCAGTAGGTCAAGAACTTACTTCCTTTGGTTGACAATAATGCCACTCTTGGATCTAGGAAACTCCATGCCTAGGAAATCATTAGCTAGTTTTTCCTTCACAAGTGTCAGTCCTATCTCATCATTACCTGTAAAAATGATATCATCAACATACACTATCAAAACGAAAACCTTGTCACTTTCTCTATGTATATAAAACATAGTATGATCGGCTTGACTTTGACTAAATCCATAGCTAGTGACTGCTTTTTCAAACGTTCAAACCAGGTTCTAGGAAACTGTTTGAGGCCATATAAAGATTTCTTTAACCTGCACACTTTGTTAATCCCAAGATCCATCTCGAAGCCAGGTGGCAAGTCCATAAATACCTCTTCTTCAAGATTCCCGTTGAGAAAGGCATTTTTAACGCCAAATTGGTAAAGTGCCAATCAAAATTAATTGCAACAGATAACAAAATTCTGATAGAATTAATTTTAGCTACTGGCGCAAATGTCTCTTGATAGTCAACTCTATAGTTCTATGTGAGCACCCACTTGCATCCCATTGTTTTCTTATCGTTTGGTAGTTAAACTATGTCCTATGTGCAATTTTGTTTCAGTGCATTCATTTCTTCCATCACTGCTAATTTCCAATTCAAATAATTTAGAGTCTCCTGAATATTCCTTGGAACAAACAGGTAGGTTATTTTGGATGTGAAAGTTTTATGACGGTCAGACAATCTATGATAAGAAAGATAATTTGCAATGAGATATTTGATACATTTACGGGTACCTTTCCTAAGGGCAATTGGAATATCAAGATCAGAGACATCAGATAAGGAATTATGAGAAGAAGAACTGGGAGAACTAGAAGAAAGTATGTTACCTGGATCTTCAGGATTATTCCTCAGAGTGTTAGATTGGTCCTATGATAGATCAACTGTCGGTTCTCGATCCCTTTAATTCAAGTTTCTCTAGTATAAACCTGAAGTTCAGGTGTTGAGTCTGTCAAAACAGTTTGAGGTGTTTCTCCCCCTGAAGAGGAACTCTCCTCACTTGGCATCGAAGGACTAGAGCTCATAATTTCAGAATTAATGATATTCGGGATTGGTGAGGTTTCCAAAAAATGATCTTCAAGGTCAGATATCTCCCCTTGAAGAGAATTTGGGGTAAATAAGGTTGATTTTTCAAGAAAACAACGTCCATACTCTCAAAATACTTGTTGGTCGAAGGGTCAAAACATTTATAAGCCTTCTTATTGGGAGCATAGCCTACAAAAATGCATTTAATGGCTCGAGGATCAAGTTTAGTTCGAGAAAGAGGAGAAGTATGAACATAAGCAAGACACCCAAATAATTTAATTGGTAAGTCAGAAAATAGCCTAACACTAGGGAAAATTTCTTTAAAATGATTGAGAGGAGTTTTAAAATTCAAAACCTTAGTTGGCATTCGATTGATCAAGTAGGTAGCAGTAAGGACGGCATCACCCCACAAAAATTTTGGAACATTCATAGAAAACATAAAGGCACGAGCAACTTCAAGGAGATGCCTATTTTTTCGTTGAGCAATTCCATTTTGTTGAGGAGTATTACGACATGTAGCTTGATGAAAAATACCCTTATCGTGCAAAAACGTATTCAAGTGTTTGTTGAAATATTCAGTTCCATTATCAAAGTGAAGAACACGGATTTAGTTTGAAATTGAATCTCAATCATATTATAAAATCGAATAAAAACTTCTTTTACTTCCGTATTTTTTGTTAATAAATAAAACCAGGTTAGACGAGTGTGATCATCTATAAAGGTAACAAACCAAAACTTACCACTATGTATCAAGACTTTAGACGGACCCCAAATATCAGTGTGAATTAAGGAGAAAGGTGAGGAAGCCTTGTAAGGGTTAGGCAAATAAGTGGATCGATGATGTTTGACAAATGCAACTTTCACAATGAAAAATAGAACAATCAATTCCTTTAAATAAATCTGGAAACAAATATTTTAGATAAAATAAATTTGGATGCCCTAATCTGCGATGCCAAAACATTATAGTTTCTGGAACAGAAGAAGAGCTGACACTACTGAAGCTCTGAGCTTTTTTTATGACTAGAAGAAACTTCATCATCAAAGTAATAGAGACCATCAATCATTCTAGCACTGCCAATCGTCTCCCCCGAGTCCTGATCCTGAAAAATACAATGAGTTCCATAAAAAATAACACGACAGTTAGCATCTTTAGAGATTTGACTGACAGATAACAGATTACATGCTAACTTTGGAACATGAAGGACAAAACATAAAGTAAATTTTTGAGTCAAAGGAATATGTCCTTTTCCTGCAATAAGGGCAAAGCTACCAGCTGCAATGCAAATTTTGGCACAATATACCGGAGAGTATGAGTCAAACAGAGAGGAGGAACTAGTCATGTGATCAGTGGCTCCAGAATCTATAATCCGTGGAGAAGAATTTATGCAAGAGAAAACTTGAGGACAATTACCTGACTGTACCAAGGAAACACTAGGATTACCATATGAAGAATTAGTCTTTAGCAGTTTCAGGATTTGGTCTATCTACTCCTTGTTAAACAGATTAGGGGCATGTTTGGGAGTGATTTCAAAATAGCTAAAATCACTTTTGTCATTTTTAAAATTACTGTGAAATATGTTTTTAATCCTTCAAAATTAATTTTAATAATTGAAAATTGTATTTAAAAGTGTAAAATTGAAAATCAAATTAATTTTGAGTGATTAAAGTGTATCTTTTAGTGATTTTAAAAATGACAGAAGTGTTTTTTAACGATTTTAAAATCACTCCCAAACATACTCTAGATTTAGCAACATTTGCATTGGAGGTATGCTGATGGGAGTTTCTGTCACTTTGTTTAGAACTCTTCCAATTAGCAGGTTTTCCATGAAGCTTTCAACTGGTTTCACGTGTATATCGAGGTTTATTGCAATGATCGCACCAGATTCGAGGCTTTTCATGTGTCCTGCTGGAATTATCAGAGGCCTTCATGGCAGTATGTTTAGTTACCAACGCAGAACTCTCGACTGACTCAATGGGTTTTTTTCCAATCATCACATTCCTGCGACTTTCTTCTTGCAAACTTTAGAAAAAACATCATTAATAGTTGGAAGAGTAGTTTTTCCAAGAATTCTACCTCGAACCTCATCAAATTCAACATTGAAGCCGGCAAGAAATTTGTAGATGCAACCATCCTCCACAGTTTTCCTGTGTTGTTTTTGGTCATCTATAGACTTCCATTCATATGTATCAAAGAGATCCAGGTCTTGCCAAATTCATTTAAGGGAGTGAAATATTGTGTGATCGAGTGACTTCCTTGACGCATATCTCCTAATTTGAGATTCAACTCAAATGCTTGTGACTGGTTTCCCAAATCAGAGTACATTTGTGTCACACTATCCCATAACTCATTTGCCGTAGAGTAGCACATATAGTTGCAACTGATGTCTTCAACCATGGAATTTACGAGCCAAGTCATGACCATGGAATTTTCAGCATCCCACGTGGCAAAGGAAGGGTCATCTGAGGTAGGAGTGTTTTTTTCTCCCGTAATGTAGCCAATCTTCCCTTGTCCACGAATATACATTCGAACACTTTGGGACCAACGAAGAAAGTTTTCCCATTAAGTCGAATGGAGGTTATTTGCACAGTGGGATTGTTAGGGTGGATTTGATTGTCTGAAACTTTAGCAATAGGTGACTTTTCATCGGACATTATTGCTGAAATTTAAAGAGAGAACAGACTAAGCCCAAACAACCACGGCCACTTGCAGCGGAATCAGAAAAATAAATAACTCCGATGAAGCAAAGAACTCCAGCGGCGACGGTCAACAGTGCATGACAATCAGAAACCTTTCCGGCTGCAGGCAACAGAAAACCTACGACCGACAGACGAATGACGATAGAGACCTTTCCATTGCAGACTCCAATAATGTGCGGCGAACGAACGACGATAGAAAGCCTACAGTCGGCGGACGTTTGGTGCAGACGCCAATAATGTCCGGCAAACGAATGGCGATAGAAAGCCTACGGCCGGCGGACGAAACTTTTTGTTGGAGGTGCGAGCGGTGA

mRNA sequence

ATGCAAGATACTAACACAAAACACGATGAAAGAATCGATTGTTTCTCTTTTTTGGTTGTCTTGGCTAAAGCGGTGACACAAAAGAACAACAGACAAAAAGATGATTGCTGCTCTTTAACCTTTCTACATGGCACACACTGCCCGTGGGATACTTCAGTTGTATGGTTTCTATCAAGATGGTCATCAACATATTTACTTCACCCTGAAGAAATCATCACTACTAACTGCAATTATGGTAAAGAACATGATAATAAGTTCCAGTCACAGCAAACCAGGAAAGTCATTTACAGCTTTTTTGGAGAACACGGCCAAGGAATTCCTATACTTGATATTATTATTCGCATATCAGCAACTACACTTTTGTCTTATCCTGGGGAAAAAGACTTGCATAACATTTATGGAAGGCAATGCTCTTCAGGCGTGAGCAGAAACGAGGACATGTATACCAAGATCAATTTGATAAGATTTAACTATAAAGTCTATACCAAGACAAGTTATCATGATCAGCAACTACACAAGGCACTCACATGTAACCAACTACTTCGTGCACTTGTTCGTCAGAAACATATTTGCAAACATCTTGTTACACTGGTGAACTCCAATAATGTGCGGCGAACGAACGACGATAGAAAGCCTACAGTCGGCGGACGTTTGGTGCAGACGCCAATAATGTCCGGCAAACGAATGGCGATAGAAAGCCTACGGCCGGCGGACGAAACTTTTTGTTGGAGGTGCGAGCGGTGA

Coding sequence (CDS)

ATGCAAGATACTAACACAAAACACGATGAAAGAATCGATTGTTTCTCTTTTTTGGTTGTCTTGGCTAAAGCGGTGACACAAAAGAACAACAGACAAAAAGATGATTGCTGCTCTTTAACCTTTCTACATGGCACACACTGCCCGTGGGATACTTCAGTTGTATGGTTTCTATCAAGATGGTCATCAACATATTTACTTCACCCTGAAGAAATCATCACTACTAACTGCAATTATGGTAAAGAACATGATAATAAGTTCCAGTCACAGCAAACCAGGAAAGTCATTTACAGCTTTTTTGGAGAACACGGCCAAGGAATTCCTATACTTGATATTATTATTCGCATATCAGCAACTACACTTTTGTCTTATCCTGGGGAAAAAGACTTGCATAACATTTATGGAAGGCAATGCTCTTCAGGCGTGAGCAGAAACGAGGACATGTATACCAAGATCAATTTGATAAGATTTAACTATAAAGTCTATACCAAGACAAGTTATCATGATCAGCAACTACACAAGGCACTCACATGTAACCAACTACTTCGTGCACTTGTTCGTCAGAAACATATTTGCAAACATCTTGTTACACTGGTGAACTCCAATAATGTGCGGCGAACGAACGACGATAGAAAGCCTACAGTCGGCGGACGTTTGGTGCAGACGCCAATAATGTCCGGCAAACGAATGGCGATAGAAAGCCTACGGCCGGCGGACGAAACTTTTTGTTGGAGGTGCGAGCGGTGA

Protein sequence

MQDTNTKHDERIDCFSFLVVLAKAVTQKNNRQKDDCCSLTFLHGTHCPWDTSVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDIIIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKINLIRFNYKVYTKTSYHDQQLHKALTCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDRKPTVGGRLVQTPIMSGKRMAIESLRPADETFCWRCER

Homology

[Close]

BLAST of Lsi06G007780.1 vs. TrEMBL
Match: A0A0A0M0V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G680090 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.0e-34
Identity = 97/210 (46.19%), Postives = 125/210 (59.52%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKEHDN+FQSQ TRKVIYSFFGEHGQGIPILDI
Sbjct: 285 SVVWFLSRWSSTYLLHPEEIITTN--YGKEHDNEFQSQHTRKVIYSFFGEHGQGIPILDI 344

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDLH +   Q    + R + +   +          N      K++
Sbjct: 345 IICIAATTLLSYPGEKDLHALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 404

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 405 LLDSAHQRSLAQTLVRSASGVRNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 464

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 465 QPDV--MMMISCLLERLRGAACALEPRTQT 486

[Close]

BLAST of Lsi06G007780.1 vs. TrEMBL
Match: F6H612_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00660 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.8e-22
Identity = 65/184 (35.33%), Postives = 102/184 (55.43%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           +V+WFL+RWSSTYL+ PEE    NCN G +H++  +SQ +RK + SFFG++ QG P+LD+
Sbjct: 629 AVIWFLARWSSTYLMVPEECREDNCNSGYDHESWLRSQHSRKALLSFFGQYNQGKPVLDV 688

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           I+RIS  TL+SYPGEKDL  +   Q    + R +++ T +          N       ++
Sbjct: 689 IVRISMMTLISYPGEKDLQALTCYQLLHSLVRRKNVCTHLVAFDSWRELANAFANGRTLF 748

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 215
           +  S H + L + L             NQ +R L    H+  +LV + N N+++  N  +
Sbjct: 749 SLHSTHQRSLAQTLVLSASGMRNPEASNQYVRDLT--SHMTAYLVEMSNKNDLK--NFSQ 808

[Close]

BLAST of Lsi06G007780.1 vs. TrEMBL
Match: A5ARC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014172 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           +V+WFL+RWSSTYL+ PEE    NCN G +H++  +SQ +RK + SFFG++ QG P+LD+
Sbjct: 329 AVIWFLARWSSTYLMVPEECREDNCNSGYDHESWLRSQHSRKALLSFFGQYNQGKPVLDV 388

Query: 112 IIRISATTLLSYPGEKDL-HNIY 134
           I+RIS  TL+SYPGEKDL +N+Y
Sbjct: 389 IVRISMMTLISYPGEKDLQYNVY 411

[Close]

BLAST of Lsi06G007780.1 vs. TrEMBL
Match: B9S7K9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0609300 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           +V+WFL+RWS TYL+ PEE   +N N G +++ +F+  Q+RK + SFFGEH QG P+LD 
Sbjct: 627 AVIWFLARWSCTYLM-PEEFRDSNINAGHDNEYQFRQLQSRKALLSFFGEHNQGKPVLDT 686

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKINLIRFNYK 160
           I+RIS TTLLSYPGEKDL  +   Q    + R +++   + ++ F+++
Sbjct: 687 IVRISVTTLLSYPGEKDLQGLTCYQLLHSLVRRKNICIHLVVLIFHFQ 733

[Close]

BLAST of Lsi06G007780.1 vs. TrEMBL
Match: A0A067DNG6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0010133mg PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           ++VWFL+RWS TYL+  EE   ++ N   +   + QS  +RK + SFFGEH QG P+LDI
Sbjct: 288 AIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDI 347

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDM 148
           I+RIS TTL+SYPGEKDL  +   Q    + R +++
Sbjct: 348 IVRISMTTLVSYPGEKDLQELTCNQLLHALVRRKNV 383

[Close]

BLAST of Lsi06G007780.1 vs. TAIR10
Match: AT3G04490.1 (AT3G04490.1 unknown protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-17
Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           +V+WFL+RWS TYLL  EE     CN G    NK QS  +R  ++++F EH QG  +LDI
Sbjct: 632 AVIWFLARWSFTYLLLVEE-----CNLGS---NKLQSLPSRACLFTYFNEHNQGKFVLDI 691

Query: 112 IIRISATTLLSYPGEKDLHNI 133
           I+RIS T+L SYPGEKDL  +
Sbjct: 692 IVRISLTSLTSYPGEKDLQEL 704

[Close]

BLAST of Lsi06G007780.1 vs. NCBI nr
Match: gi|778664306|ref|XP_011660267.1| (PREDICTED: exportin-4 isoform X2 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 4.3e-34
Identity = 97/210 (46.19%), Postives = 125/210 (59.52%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKEHDN+FQSQ TRKVIYSFFGEHGQGIPILDI
Sbjct: 524 SVVWFLSRWSSTYLLHPEEIITTN--YGKEHDNEFQSQHTRKVIYSFFGEHGQGIPILDI 583

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDLH +   Q    + R + +   +          N      K++
Sbjct: 584 IICIAATTLLSYPGEKDLHALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 643

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 644 LLDSAHQRSLAQTLVRSASGVRNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 703

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 704 QPDV--MMMISCLLERLRGAACALEPRTQT 725

[Close]

BLAST of Lsi06G007780.1 vs. NCBI nr
Match: gi|700211666|gb|KGN66762.1| (hypothetical protein Csa_1G680090 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 4.3e-34
Identity = 97/210 (46.19%), Postives = 125/210 (59.52%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKEHDN+FQSQ TRKVIYSFFGEHGQGIPILDI
Sbjct: 285 SVVWFLSRWSSTYLLHPEEIITTN--YGKEHDNEFQSQHTRKVIYSFFGEHGQGIPILDI 344

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDLH +   Q    + R + +   +          N      K++
Sbjct: 345 IICIAATTLLSYPGEKDLHALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 404

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 405 LLDSAHQRSLAQTLVRSASGVRNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 464

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 465 QPDV--MMMISCLLERLRGAACALEPRTQT 486

[Close]

BLAST of Lsi06G007780.1 vs. NCBI nr
Match: gi|778664303|ref|XP_011660266.1| (PREDICTED: exportin-4 isoform X1 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 4.3e-34
Identity = 97/210 (46.19%), Postives = 125/210 (59.52%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKEHDN+FQSQ TRKVIYSFFGEHGQGIPILDI
Sbjct: 627 SVVWFLSRWSSTYLLHPEEIITTN--YGKEHDNEFQSQHTRKVIYSFFGEHGQGIPILDI 686

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDLH +   Q    + R + +   +          N      K++
Sbjct: 687 IICIAATTLLSYPGEKDLHALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 746

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 747 LLDSAHQRSLAQTLVRSASGVRNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 806

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 807 QPDV--MMMISCLLERLRGAACALEPRTQT 828

[Close]

BLAST of Lsi06G007780.1 vs. NCBI nr
Match: gi|659086150|ref|XP_008443789.1| (PREDICTED: exportin-4 isoform X2 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32
Identity = 94/210 (44.76%), Postives = 123/210 (58.57%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKE DN+FQSQ TRKVIYSFFGEHGQG+PILDI
Sbjct: 524 SVVWFLSRWSSTYLLHPEEIITTN--YGKERDNEFQSQHTRKVIYSFFGEHGQGVPILDI 583

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDL  +   Q    + R + +   +          N      K++
Sbjct: 584 IICIAATTLLSYPGEKDLQALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 643

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 644 LLDSAHQRSLAQTLVRSASGVKNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 703

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 704 QPDV--MMMISCLLERLRGAACALEPRTQT 725

[Close]

BLAST of Lsi06G007780.1 vs. NCBI nr
Match: gi|659086148|ref|XP_008443788.1| (PREDICTED: exportin-4 isoform X1 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32
Identity = 94/210 (44.76%), Postives = 123/210 (58.57%), Query Frame = 1


Query: 52  SVVWFLSRWSSTYLLHPEEIITTNCNYGKEHDNKFQSQQTRKVIYSFFGEHGQGIPILDI 111
           SVVWFLSRWSSTYLLHPEEIITTN  YGKE DN+FQSQ TRKVIYSFFGEHGQG+PILDI
Sbjct: 627 SVVWFLSRWSSTYLLHPEEIITTN--YGKERDNEFQSQHTRKVIYSFFGEHGQGVPILDI 686

Query: 112 IIRISATTLLSYPGEKDLHNIYGRQCSSGVSRNEDMYTKI----------NLIRFNYKVY 171
           II I+ATTLLSYPGEKDL  +   Q    + R + +   +          N      K++
Sbjct: 687 IICIAATTLLSYPGEKDLQALTCNQLLRALVRQKHICKHLVALDSWRNLTNAFDNEKKLF 746

Query: 172 TKTSYHDQQLHKAL-----------TCNQLLRALVRQKHICKHLVTLVNSNNVRRTNDDR 231
              S H + L + L           + NQ +R L+   H   HLV + +  ++  T+  +
Sbjct: 747 LLDSAHQRSLAQTLVRSASGVKNIESSNQYVRDLM--GHTATHLVEMASRKDL--TSIAQ 806

Query: 232 KPTVGGRLVQTPIMSGKRMAIESLRPADET 241
           +P V   ++ + ++   R A  +L P  +T
Sbjct: 807 QPDV--MMMISCLLERLRGAACALEPRTQT 828

The following BLAST results are available for this feature:

BLAST of Lsi06G007780.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G007780.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0V8_CUCSA	3.0e-34	46.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G680090 PE=4 SV=1	[more]
F6H612_VITVI	5.8e-22	35.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00660 PE=4 SV=...	[more]
A5ARC3_VITVI	2.2e-21	57.83	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014172 PE=4 SV=1	[more]
B9S7K9_RICCO	2.4e-20	46.30	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0609300 PE=4 SV=1	[more]
A0A067DNG6_CITSI	1.1e-17	47.92	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0010133mg PE=4 ...	[more]

BLAST of Lsi06G007780.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04490.1	2.3e-17	53.09	unknown protein	[more]

BLAST of Lsi06G007780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664306\|ref\|XP_011660267.1\|	4.3e-34	46.19	PREDICTED: exportin-4 isoform X2 [Cucumis sativus]	[more]
gi\|700211666\|gb\|KGN66762.1\|	4.3e-34	46.19	hypothetical protein Csa_1G680090 [Cucumis sativus]	[more]
gi\|778664303\|ref\|XP_011660266.1\|	4.3e-34	46.19	PREDICTED: exportin-4 isoform X1 [Cucumis sativus]	[more]
gi\|659086150\|ref\|XP_008443789.1\|	4.0e-32	44.76	PREDICTED: exportin-4 isoform X2 [Cucumis melo]	[more]
gi\|659086148\|ref\|XP_008443788.1\|	4.0e-32	44.76	PREDICTED: exportin-4 isoform X1 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G007780	Lsi06G007780	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G007780.1	Lsi06G007780.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G007780.1.CDS.1	Lsi06G007780.1.CDS.1	CDS
Lsi06G007780.1.CDS.2	Lsi06G007780.1.CDS.2	CDS
Lsi06G007780.1.CDS.3	Lsi06G007780.1.CDS.3	CDS
Lsi06G007780.1.CDS.4	Lsi06G007780.1.CDS.4	CDS
Lsi06G007780.1.CDS.5	Lsi06G007780.1.CDS.5	CDS
Lsi06G007780.1.CDS.6	Lsi06G007780.1.CDS.6	CDS