Lsi06G005530.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G005530.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phytochromobilin:ferredoxin oxidoreductase
Location	chr06 : 6994361 .. 7000457 (-)
Sequence length	1196

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCATCCTTACTTTAAATAACATTTTATCCGACTTGATTTCACCAATTTGGCGACGTGGGTCAACTCAGAATCCAAAATCCTTCTTCTTCAGCGGCTCAAACCCCAACAGTGGATCGATCGAATCGAGAGATAGAAAATGGGATTTTAGTAACGCAAATGCTTCAACTGAACCCTTCATTGGAAGCTTTGCTGCAATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGTAATGGGTCTTCTGATTTTGCTTCATTTGAGCTTCTCTAATATATTTTGCTTTGTAATGCTTCAAACAAAGTTTGGCTGTTGTTCTCTCCAGATTGGTATTTGTTTTCTTTGTTAAGTAGTGTCTGTGTAAGAATAGGGATGCTTTTTGTTTTTCTTGCAACTTTTAACTTCCTATCCCCTGTTCTACTGTGAGCTACTGAATGATGAGCTTTTTTTCAGGGCATTTTCAAGTTGTTTTACTGATTCTGTGTGAAGAGGTTTGATGGACTTGTTGTTTTAGAATAATTTTCATTGCTTTATCTTTAATGGACTGGAACTGACTCTCTCTAGCAAAGTATTCTGCGTTTTTAACTTGTCATAAGAATGCTCAGAAATTAATCTTTTGAGTCCTATTATCATTGGTCTGTCAAGTCATGCTAAATCAACTAATATTTGGGCAAAGTGAGATTAGTTCAACGGTAATTGGCATGACTTTCTTCTCTAGAGGTTGAAGCTTTGATTTCCATCTCTGCAATTGTTGTACTAAAAGAAAAAAACTAATATTTGTCCATTAGACTTACCACATCACTAATGATATTAATAACAGAGTCTACCTGGGATGGAATTGAAACTTTTGAAAGTAAATAAACACAACCATCAAACTTAATGGATTGAATTTGTAATTTAACTCTTGGTCCCTTTCTTGTCTATTGTCATTTTACGTAGAATTAATCTTAATTGTTTATTTTCTCTACATTTTATATTTCTTCAAACTTGCACATTTCCTTTTAGGGAGATTGTCGGATTGGTTTCTTGTTCTTATCTTGCTGGATTATAGCAGGTGTTTTTTTTCAACATAGATTCCATGTCTTTTTATGTCAGGATATTGAAGAAATCTAGCGATTCGTCAATCATATCTAAACTATTGCTTAAGATTATAGATTCATTTTTATCTAGAATGCACAGGTTGTCAACACACTAATTACTGAATACCCTAGTTGATATTTTAACTGATTGTATGATTTTATGTCAAGTCAAGTCAATATAATGCAATGTTTCAGGCTTGCATTTACATAAATGGTTGTGTAGTCTGTATCTTGGCTGTTATTGTCAGCATTCTTGATGTATTTCTGGTTGAAGTTTGTAAACCTTATGAATTAAATTTTAAAAAGTATATGAATTCAGACATGAATCATTGTTTCTGCCATCATATCTATATAATTATTCTTATCCTGCAGGAAAAATATAATTCCATGATTTCCTTGGACAAAAAAGTCAAGCTTGAAATGTTATCTTTCCAAGCTCCGAAGATCAGACTACTTCGCAGTTTGAATATTGAAAGTGAAACAATGCAGGTTTTATTTTATATTTCAACCCTCTTAGGAAGAACTTTTTATGCTTTAGTTCATATAATATGATTGGAAAATTAAATATAAGAGAATTTCAGCTGTATTAGGTATAGTGACTTGACAGAGGAGTATTGGAGGATTCTCTGACGATCACTTCTGTCTTTTTTGAGAAGGGAAACAAATTTTATTGACGAATGAAATAAAATGAGTAAACCTCAAAATGGATTACATGAAAACTTTCCAATTGGAAATCAGATACAAAAAACTATATTACAAAAGAAAGAAGTTTTATTAGTTCTCTGGCCCTTTTTACTTGTGGCCTTCTTTATTTTTCCTTGCTGAAATTCACTGCTTCCCCTTAAATTTAAAATTTAAAAATGTTAAAAGAACAACCATCCCTTGAGAAAGTTTTCCTTGGATATCAAAGTATAGAAATTTGCTAGTTATCCCAAGATAGTGTTGTAGTTTGTTGATGGTGAGAGGCTTAGTCTGAAGTCATAGACTTAAAAGTACTTGGTTATGGTTATGGGAATATTGATCCATGCAGCCATTCTTAGTAGAAAATCATTGTAAGAATTAATATCAATGATTTTGACGTTTCTGAATAATTTGGGACAGCTTCCAACAAATTTCTAGACCGCAGTTTGTGTAGCTAGCCCAGACGTAAATCTTATTTTCCTTTTTTGTAACTATTTTCTGCGGGTTAGAAATGCAAACCTTAAACTGCTGAAATTCATTCCTGAACCTGTGTGTGTTCAGTCACCATACTTAGTGTCTATGTTTATATTCTAAGAACTATTTCCATTCATTTATGGTGCAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGTAAGCTTCTTTGATCTTTGGAGCCTGACAATAGTCTTGCATTATTTTTTCAATGTTTATACAAATTTTACATCGTCTACCTTGGAAGCATAGGAAATACTTAATTTGATGTTCTTGATATGAGAACATCAGTGATTCGGTCTAAACATCGGTCTAAAGTTCCATTGGTTGTGCGAATGCCTAGCACACTTTTAACGATAATATCCAACAAGTCAATTTAGTTCAACTCAAAGGATGGAGGTAGATACAGATTACCTCTAGGTCAAAACCTAGAAGAAAAAACCCAAATCTTGTTGGAAGGGGTCATATCTCTTATGGTTTTCCCAATTTCTCTCAGTTTGTTTGTTAGTTTCTGTTCTAGGAAAGGTTCAAAAATTTATTTTTAGGAGGACCATTGGGTGGGAGATAAAGCCTTTTTGTGTTTTATTTCCGCATTTACACTTTCTTTTGAACTAGATGTTGTGTTTAGTGGCCTCGGTGCTGCCTTCCCCGGACCATTCTTCTTTGATTTTATTAGGTTTGTGTCATCCTCAGTTTGATAGAGAGACGATAGATGTGGGGGGTCGTCTTTATATTTGTTGAGACCAGCACATGTTTCCATAAGAAGGTATATTAGGATTTGTACTCCTGATCCTTCTAGGTCTTTCTTTCCTACGTCAACTACTGCAGTTTTCACTTTTTTCCTAATTGTGGAAGGTTAAAATTCCGAAGAAGGTAAAGATTTTTGCATGGCAAGTTTTACATGGGAGGGCTAACACCATAGATCGTATTCAAAGACACTCTTCCTTTGTTTTGTACTAGGGTGCATTCTCTTTAGGAGGACAAGGAGGATCTTAATCATTTAGTGAATGTTTGGGGCAAGGGGTGGAGTTGTGAACTCAATGGAGTTATGAAGTTTGGGGAGTTATGAACTCCCAGGACTTACAGTATAAGGAGTTGATCAGGTATGAAATTGATATTTTTTAGTAGTGGGACCCACAAACTCCTTGGGTCAAACAAGGAGTGGAGTTCACAACTCCACACTTCCAACTTCCTACTCTCCAACTCCTTGACCGAAACACCCCCTTACTGTGGAGTTGCTAGTTTGCAAACTACCTTGCAGTCACTGGTTGAGTTCTTTTAGTGTTTGTGGGGCTCGCAACAGAGATAGGTGGTCTATATTGGAGAAGGTGCTTTTCGATCCTCCCTTTAAGGAGAGGGGCAAAGTTTTGTGGCATGCTAACTTCTTTGCTGTTTTGTGAGATATTTGGCTTGAGAAGAACAGTAGAACTTTTGGAGAGGTTGTGAAATCGAGTGAGGAAGTTTGGGAGGTGACGATGTTTAACGCTTATTTATGGGTATCAGTCACTAGGCCTTTTTGTAATTATAGTCTTGGTCTTGTTCTTTTAGATTGGAGTCCTTTTTTGAGGTTAGGGTTGGACTCTCATTTTTTTGGCATGTTTTTGTACGCCTTTGTATTCTTTCATTGTTCTCAATAAAAGCTTAGTTTCATACACCGCAAAAAAGGTTTGATGGCCAATCAATCTTAAAGCATGTCATCTAATCACAAGAATTGTTGATATTCATTTTTTATCCGCCACCTATATGTGCATAAATGTACAAATCTGCAATTTTTCCGACACTCATTAGGCTTAATAAGTTACATAGACAAGAGAATGTGGGCATCTTGTCTTCTGATTTAGTGAGCTTTCTCCAGTTTTTGTTGGTAGGCACTTGTTAGAAACTTAAGTAAGAGACGAATGGAAATGAAAATGACCAGAACTGATCCCATACGCAACTTTTTTAGCAATCTCAATCACATACCTGAAAAAAGAAAAAAAAAGGTTGATTTGGATTGAAATGAGTTTGCCTTATATGCATCCAGCGAGGGTTTTAACGCATGCATCAAATTGTGCTCCGTACACTTTGTATTCCGAGTGTCCAAATTTTATGTTAAAATATCTTCTCTAACTAGATTACCGGTTAATGTTCTTGTTCTTGCTGGAACCTACACTAAATATAATTTGCAACCATTCGTAACACTAACTCGGTTTTTTTTTTTTTTTTTTTAGGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTGTATGTTTTTTTTCTTAAGATATTAGTTTATATTACTACTACAGGCACTGTAGACTCGTTACTTTTATGACATTTGGTATACAACTTTTTTCCTTGATCTGTTCTAAATTTGATGTGATGATTACTGAAAACAGACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGAAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGTACGATATATTGTTTTCTGCATTCGTGGATTACTACAAGGTAATTGAAATTAACTATGCTGCTGCTATGATAAAGATTCCTATTTTTCCCCCCTTTTTGTGTGATTTCTAGCTCTGTCTTTTGAAGATTTTTAGTTATATGCATGTATTGGATCTTATTTTGATTATGTTACTGAAAGTTCCAATTTACTGCAAGGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGTAATAACATTTGTTTTCATATCATGGATCTCTTCTTCTTTCCTTTTATATTTTTGTTTTACGAAAATTTCCAACTTAGCTCTGGAGATCGGAGAAGCTCTGGTTGTATATGGATGGATATTACCAAAACTTAGCTAGATAATTACCCACAGTTGAACTTTGGTTGTAGTTTGTTCAAATTTGGAGCTGCAAGATCATTTATGAGTCTACTAAATTGCTTTTTTCTCTATACACAACTCCTGAAATAAATTTAATCTAGACTATAAAGTTTCATGAAACTCTCTCTTTTGTTAAAATTTCTGCTGACTTTATTCGATGCAACATTCACAAACAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGTAACATACACGAAATCTGTCAATGTTCTTGCATCGTTTAAAAGTTTCATTCTCTCACTTCACATCTAACCATCAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGAATTTATTGGAGATACTATCAAAAGCTGATGTTGGTTCCCTTCCTTACTGATATTTTTGGTTAAGTTAATGTAGGTGTACTATGTGAGAAGTTAGAATTATGTAACCTGTACATTAGACTGAGCTCAAATTTTGCTGATTTATTGTTGGCAAGCAAGTAG

mRNA sequence

TTTTCATCCTTACTTTAAATAACATTTTATCCGACTTGATTTCACCAATTTGGCGACGTGGGTCAACTCAGAATCCAAAATCCTTCTTCTTCAGCGGCTCAAACCCCAACAGTGGATCGATCGAATCGAGAGATAGAAAATGGGATTTTAGTAACGCAAATGCTTCAACTGAACCCTTCATTGGAAGCTTTGCTGCAATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGAAAAATATAATTCCATGATTTCCTTGGACAAAAAAGTCAAGCTTGAAATGTTATCTTTCCAAGCTCCGAAGATCAGACTACTTCGCAGTTTGAATATTGAAAGTGAAACAATGCAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGAAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGTACTATGTGAGAAGTTAGAATTATGTAACCTGTACATTAGACTGAGCTCAAATTTTGCTGATTTATTGTTGGCAAGCAAGTAG

Coding sequence (CDS)

ATGGGTTCTTCTTCTCGTCTATCCTTCTCCCTTTCCTTCAACTTTCCACCATTTTCAAGCAACTGTAGCAGTAAAAACAAGTGTAAAAGAGCTTTCATTCCCATCTCTTCAATTTCATATCAGAAATTTGTTCAATTCGCTTTGGATGAAACCAAACTTCACACCCATCTCTTCCCTTCCCCTTTACAGGAAAAATATAATTCCATGATTTCCTTGGACAAAAAAGTCAAGCTTGAAATGTTATCTTTCCAAGCTCCGAAGATCAGACTACTTCGCAGTTTGAATATTGAAAGTGAAACAATGCAGGTTTTAGATTTTGCTGCATTCCCAGAACCAGAATTTGATGTTCCCATATTTTGCGCAAATATTTTCACTGCTGCAAGTTCAAGTATAGTAGTACTGGATCTCAACCCTTTGCATGATGTTATCACCCAAAGAGATTATAGAGAGAAGTACTATAAAAGCTTATTGCATCTTGGGACTAAATATGCTGAGGTACTTCCTGCAGCTCTTACCCTGGGGCGGAAAGCTTACGAGCGAGTCGTTGAAATTTTTCTCTCCCATTGTGATATGGACCAAGTTTTCCTCAACCGAGTCCAAGCATGGCTTGAGCTCGTAAACAATATTGAGGAGGAAACTATCCCGTCTCGACTTATGATTAATCGAGAAGCGCAACACAGATACCTGTTATGGAGGGCAGAAAAGGATCCGGGACACGGTCTTCTAAGAAAATTAATTGGGGAGACGCTTGCAAAGGACCTGGTGAGAAATTTCCTGTTCAATGGCATCGACGAGCTCGGAAGCAAAAGGTTTCTGGATTACTTTCCCGAGTACTGTTGCGAAGATGGTACTATCAACACGAAACGCAGTATGGCTGGAAAGTCTTACGAACATCGACCTTGGGATAAAAGAGGTGTACTATGTGAGAAGTTAGAATTATGTAACCTGTACATTAGACTGAGCTCAAATTTTGCTGATTTATTGTTGGCAAGCAAGTAG

Protein sequence

MGSSSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVEIFLSHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRGVLCEKLELCNLYIRLSSNFADLLLASK

Homology

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BLAST of Lsi06G005530.1 vs. Swiss-Prot
Match: PFBS_ARATH (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.7e-83
Identity = 152/298 (51.01%), Postives = 205/298 (68.79%), Query Frame = 1


Query: 17  PFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKV 76
           P   N + + + KR  + +S++SY++F + AL+ET+    L PS LQEKY+SM  LD K 
Sbjct: 28  PNKINFTLRRRKKRFLLRVSAVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKT 87

Query: 77  KLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDL 136
           +L+ML+F++ KIRLLRS+ IE+ETMQV DFA F EPE+D PIFCAN FT+ + +IVVLDL
Sbjct: 88  ELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDL 147

Query: 137 NPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVEIFL---------S 196
           NPLH +  Q DY++KYY  ++ +  KYAE  P    L  ++ +    + +          
Sbjct: 148 NPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWGGKLTGESIKFFSPLVMWTRFSSSKEK 207

Query: 197 HCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIG 256
           H  +   FL   QAWLE+   + EE  PS +  N EAQH+YL WRA+KDPGHGLL++L+G
Sbjct: 208 HKALFSAFLEYYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVG 267

Query: 257 ETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRG 306
           E  AK+L+R+FLFNG+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE RPWD  G
Sbjct: 268 EAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

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BLAST of Lsi06G005530.1 vs. Swiss-Prot
Match: PEBB_TRIEI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain IMS101) GN=pebB PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18
Identity = 64/238 (26.89%), Postives = 115/238 (48.32%), Query Frame = 1


Query: 40  YQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKVKLEM------LSFQAPKIRLLRS 99
           YQ F+ +AL + K    L P P+   +   +++  K K +        +  +PK+R +R+
Sbjct: 11  YQPFLDYALTKLKEELELQPYPIPSGFEHKVAMTGKGKKQQEVQTTSYAHCSPKLRQIRA 70

Query: 100 LNIES-ETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKY 159
            +++    +QVL+F  FP   +D+P F A++ +     ++ LD+ PL     Q  Y++KY
Sbjct: 71  AHVQGGSALQVLNFVIFPHLNYDLPFFGADLVSLPGGHLIALDMQPLFRDNLQ--YQKKY 130

Query: 160 YKSLLHLGTKYAEVLPAALTLGRKA---------YERVVEIFLSHCDMDQVFLNRVQAWL 219
            + +     K+ + LP       +A         + R  +  L    + + F + +QA+L
Sbjct: 131 TEPIWETFQKHQKYLPWGGDFPEEATPFFSPAFLWTRPQKTELVETRVFEAFKDYLQAYL 190

Query: 220 ELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFN 262
             V   E+ T   +L   +EAQ RYL +RAEKDP   +L +  G    ++ +  FLF+
Sbjct: 191 IFVKQTEQITNSEKLAEIKEAQLRYLRYRAEKDPARKMLTRFYGHEWTEEYIHGFLFD 246

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BLAST of Lsi06G005530.1 vs. Swiss-Prot
Match: PEBB_NOSP7 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pebB PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-17
Identity = 60/238 (25.21%), Postives = 113/238 (47.48%), Query Frame = 1


Query: 40  YQKFVQFALDETKLHTHLFPSPLQEKYNSMISL------DKKVKLEMLSFQAPKIRLLRS 99
           YQ F+ +A+   +    L P P+   + S  ++       ++V     +FQ  K+R +R+
Sbjct: 11  YQPFLDYAIAYMRSRLDLEPYPIPTGFESNSAVVGKGKNQEEVVTTSYAFQTAKLRQIRA 70

Query: 100 LNIES-ETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKY 159
            +++   ++QVL+F  FP   +D+P F A++ T     ++ LD+ PL        Y+ KY
Sbjct: 71  AHVQGGNSLQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFR--DDSAYQAKY 130

Query: 160 YKSLLHLGTKYAEVLPAALTLGRKA---------YERVVEIFLSHCDMDQVFLNRVQAWL 219
            + +L +   + + L        +A         + R  E  +    +   F + ++A+L
Sbjct: 131 TEPILPIFHAHQQHLSWGGDFPEEAQPFFSPAFLWTRPQETAVVETQVFAAFKDYLKAYL 190

Query: 220 ELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFN 262
           + V   E  T    L+  ++AQ RYL +RAEKDP  G+ ++  G    ++ +  FLF+
Sbjct: 191 DFVEQAEAVTDSQNLVAIKQAQLRYLRYRAEKDPARGMFKRFYGAEWTEEYIHGFLFD 246

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BLAST of Lsi06G005530.1 vs. Swiss-Prot
Match: PEBB_GLOVI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain PCC 7421) GN=pebB PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.9e-15
Identity = 65/238 (27.31%), Postives = 109/238 (45.80%), Query Frame = 1


Query: 40  YQKFVQFALDETKLHTHLFPSPLQEKYNSMISL--DKKVKLEMLSFQAPKIRLLRSLNIE 99
           Y+ F++ A         L P P+   +    +L   + V     ++Q+PK+R +R+ +++
Sbjct: 4   YEPFLERAQQVLTRRLELAPYPIPVGFERKEALVRGEAVVTTSTAWQSPKLRQIRAAHVQ 63

Query: 100 SE-TMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLNPLH--DVITQRDYRE---- 159
               +QVL+F   P  E+D+P F A++ T     ++ LD+ PL   D   Q  Y E    
Sbjct: 64  GGGALQVLNFVISPRLEYDLPFFGADLVTLPGGHLIALDMQPLFRDDPAYQAKYTEPIVP 123

Query: 160 --KYYKSLLHLGTKYAEVL-----PAALTLGRKAYERVVEIFLSHCDMDQVFLNRVQAWL 219
             + +++ L  G  + E       PA L      + R  E       +   F++ + A+L
Sbjct: 124 LFEAHRAHLEWGGDFPEEARPFFSPAFL------WTRPKETGTVETRVFAAFVDYLNAYL 183

Query: 220 ELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFN 262
           + V   E  T P  L     AQ RYL +RAEKDP  G+ R+  G    ++ +  FLF+
Sbjct: 184 DFVERAEPVTHPEGLAAVERAQLRYLHYRAEKDPARGMFRRFYGPEWTEEYIHGFLFD 235

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BLAST of Lsi06G005530.1 vs. Swiss-Prot
Match: PEBA_SYNPY (15,16-dihydrobiliverdin:ferredoxin oxidoreductase OS=Synechococcus sp. (strain WH8020) GN=pebA PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.4e-08
Identity = 51/216 (23.61%), Postives = 95/216 (43.98%), Query Frame = 1


Query: 59  PSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIES-ETMQVLDFAAFPEPEFDVP 118
           P PL E      S      ++   +  P  R  R   +++ +++QV +  A+P+  +D P
Sbjct: 20  PLPLPEGLEECRSSKSSSVIQSWLWDVPGFRRWRVTRLDAGDSLQVFNSVAYPDYNYDHP 79

Query: 119 IFCANI--FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGR 178
           +   ++  F A    + VLD  PL   +  +DY ++Y+  L  L  ++ + L    T+  
Sbjct: 80  LMGVDLLWFGARQKLVAVLDFQPL---VQDKDYLDRYFSGLKELNQRFPD-LNGEETMRS 139

Query: 179 KAYERVVEIFLSHC---------DMDQVFLNRVQAWLELVNNIEE--ETIPSRLMINREA 238
               +    +L  C          + + F   ++A+ +L +N +    TIP   + N   
Sbjct: 140 FDPNQYFSSWLLFCRGGAEQADLSLPKAFSAFLKAYWDLHDNAKSIPSTIPPEEVKN--L 199

Query: 239 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLF 261
           Q +Y ++ AE+DP HGL     G+  +   +  FLF
Sbjct: 200 QDKYDIYSAERDPAHGLFTSHFGKDWSNRFLHEFLF 229

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BLAST of Lsi06G005530.1 vs. TrEMBL
Match: A0A0A0LXG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.2e-134
Identity = 244/311 (78.46%), Postives = 269/311 (86.50%), Query Frame = 1


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQ 63
           SSRL FSLSFN PPFS+NCSSKN+ KRAF PISSISYQKFVQFALDETKLHTHLFPSPLQ
Sbjct: 3   SSRLCFSLSFNSPPFSTNCSSKNRSKRAFFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  EKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANI 123
           EK+NSM+SLD+K KLEMLSF APKIRLLRSLNIESET+QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKSKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAYERV 183
           FTAA+SSIVVLDLNPLHDVI+QR YREKYYKSLLHLGTKYAE+LP    LT     +   
Sbjct: 123 FTAANSSIVVLDLNPLHDVISQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLKFFSP 182

Query: 184 VEIFLSHCDMD-------QVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAE 243
           + I+      +         F++  +AWLEL+NN  EETIP +LM+NREAQHRYL WRAE
Sbjct: 183 IVIWSKFSSTESKYDILFSAFMDYYKAWLELMNNTGEETIPPQLMVNREAQHRYLSWRAE 242

Query: 244 KDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGK 303
           KDPGH LLRKLIGETLAKD+VRNFLF+G+DELGSK+FLDYFPEYCCEDGTINTKRSMAGK
Sbjct: 243 KDPGHHLLRKLIGETLAKDVVRNFLFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGK 302

Query: 304 SYEHRPWDKRG 306
           SYEHRPWD+RG
Sbjct: 303 SYEHRPWDERG 313

[Close]

BLAST of Lsi06G005530.1 vs. TrEMBL
Match: M5WHM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008498mg PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-102
Identity = 189/297 (63.64%), Postives = 229/297 (77.10%), Query Frame = 1


Query: 18  FSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKVK 77
           FSS CSS  K +   + +S+ISY+KF+  ALDETK HTHL PSPLQE+YNS IS+D K +
Sbjct: 24  FSSICSSSRKQQMPIVQLSAISYKKFINSALDETKRHTHLAPSPLQERYNSRISMDGKSE 83

Query: 78  LEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLN 137
           +EMLSF+A K+RLLRSL IES+TMQVLDFA FPEPEFD+PIFCAN F++A+++IVVLDLN
Sbjct: 84  IEMLSFEATKVRLLRSLCIESQTMQVLDFAVFPEPEFDMPIFCANFFSSANTNIVVLDLN 143

Query: 138 PLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKA---------YERVVEIFLSH 197
           PLHDVI+QRDY+EKYYK L+ LG KYAE+LP    L  ++         + R       +
Sbjct: 144 PLHDVISQRDYKEKYYKGLIPLGLKYAELLPWGGKLTSESLKFFSPIVIWTRFTSSSYKY 203

Query: 198 CDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGE 257
             +   F++  +AWLEL++    ET  S++M NREAQHRYL WRAEKDPGHGLL+KLIGE
Sbjct: 204 DVLYSAFMDYYKAWLELMDQAVVETNASKIMCNREAQHRYLTWRAEKDPGHGLLKKLIGE 263

Query: 258 TLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRG 306
           T AKDL+ NFLFNGIDELGSK FLDYFPEYCCEDGTIN  RS+ GKS+E RPWD +G
Sbjct: 264 TQAKDLLVNFLFNGIDELGSKSFLDYFPEYCCEDGTINQSRSIIGKSFESRPWDGKG 320

[Close]

BLAST of Lsi06G005530.1 vs. TrEMBL
Match: F6HA07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03770 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 8.7e-98
Identity = 186/322 (57.76%), Postives = 233/322 (72.36%), Query Frame = 1


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQ 63
           SS LSF  +   P  + +  +  K K A + +S+ SYQKF+ FALDETK  THL PSPLQ
Sbjct: 3   SSSLSFFSTLKRPLSTGSNINNFKPKGALVEVSACSYQKFLHFALDETKRRTHLLPSPLQ 62

Query: 64  EKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIE-SETMQVLDFAAFPEPEFDVPIFCAN 123
           E +NSM+++D K KL+M+SFQAPKIRLLR+L+IE SE MQ+LDFA FPE EFD+PIFCAN
Sbjct: 63  ENFNSMMAMDGKAKLQMVSFQAPKIRLLRNLSIEASEGMQILDFAVFPEQEFDLPIFCAN 122

Query: 124 IFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVV 183
            FT  +++I+VLDLNPLHDVI +RDY+EKYYKSL+ LG KYAE+LP    L  ++     
Sbjct: 123 FFTTPTTNIIVLDLNPLHDVINRRDYKEKYYKSLMPLGLKYAELLPWGGKLTSESLRFFS 182

Query: 184 EIFL---------SHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRA 243
            I +          H  +   F++  +AWLEL+    EE   S+++ NREAQHRYL WRA
Sbjct: 183 PIVIWTKFTSSQYKHGVLYSAFMDYYKAWLELMEQAAEERDTSQIICNREAQHRYLTWRA 242

Query: 244 EKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAG 303
           EKDPGH +L+KLIGE+L+KDLVR+FLFNG+DELG+K FLDYFPEYCCE+GTIN KRS+ G
Sbjct: 243 EKDPGHRILKKLIGESLSKDLVRSFLFNGVDELGTKTFLDYFPEYCCENGTINDKRSIIG 302

Query: 304 KSYEHRPWDKRGVLCEKLELCN 316
           KS+E RPWD  G     L   N
Sbjct: 303 KSFESRPWDTSGEFIGSLPSLN 324

[Close]

BLAST of Lsi06G005530.1 vs. TrEMBL
Match: A0A0D2W9D9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G252400 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 5.6e-97
Identity = 186/321 (57.94%), Postives = 228/321 (71.03%), Query Frame = 1


Query: 4   SSRLSFSLSFNFPPF----------SSNCSSKNKCKRAFIPISSISYQKFVQFALDETKL 63
           SS LS SLS    P           +S  S + K +   + +S+ISYQ F+ FALDETK 
Sbjct: 7   SSSLSLSLSLMLKPRPPLMTINYNGNSQWSKRKKKRHCLLQVSAISYQNFIHFALDETKR 66

Query: 64  HTHLFPSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPE 123
           HT L PSPLQEKY SMI++D++ +LEMLSF+ PKIRLLRS++IE E MQVLDFAAFP+PE
Sbjct: 67  HTLLLPSPLQEKYGSMIAMDEQTRLEMLSFETPKIRLLRSMSIEGEAMQVLDFAAFPKPE 126

Query: 124 FDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTL 183
           FD+PIFC N FT A+ +IVVLDLNPLHDV ++RDY+EKYY  LL LG KY E+LP    L
Sbjct: 127 FDLPIFCGNFFTTANMNIVVLDLNPLHDVTSRRDYKEKYYDCLLPLGLKYTELLPWGGKL 186

Query: 184 GRKAYERVVEIFL---------SHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREA 243
             ++ +    I +          H  +   F+   +AWLEL+    E+T PS++  N EA
Sbjct: 187 TSESIKFFSPIVIWTKFSSSNSKHEVLYSAFMEYYKAWLELMEQAVEDTDPSQITCNLEA 246

Query: 244 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 303
           QHRYL WRAEKDPGHG+L++LIGE LAKDL+RNFLF+GIDELGSK FLDYFPEY  EDGT
Sbjct: 247 QHRYLTWRAEKDPGHGVLKRLIGEKLAKDLLRNFLFSGIDELGSKTFLDYFPEYGIEDGT 306

Query: 304 INTKRSMAGKSYEHRPWDKRG 306
           IN KRS+ GK +E+RPWDK G
Sbjct: 307 INEKRSIIGKGFENRPWDKNG 327

[Close]

BLAST of Lsi06G005530.1 vs. TrEMBL
Match: V4U5W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 9.6e-97
Identity = 183/322 (56.83%), Postives = 231/322 (71.74%), Query Frame = 1


Query: 7   LSFSLSFNFPPFSSNCSSKNKCKRA--------------FIPISSISYQKFVQFALDETK 66
           L+F L    P  +++ SS N  +                 + +S+ SYQKFV FA++ETK
Sbjct: 2   LNFCLMLKSPSLTTSVSSCNNGRGGSCSVYWRRRRKAPVLLQVSAASYQKFVDFAVNETK 61

Query: 67  LHTHLFPSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEP 126
            H  L PSPLQEKYN+++++D K +L+M SFQAPKIRLLRS++I++E MQVLDFA FP+P
Sbjct: 62  RHAVLAPSPLQEKYNTLVAMDGKTELQMSSFQAPKIRLLRSMSIQNEVMQVLDFAVFPKP 121

Query: 127 EFDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALT 186
           EFDVPIFCAN FTAAS++IVVLDLNPLHDVI  RDY++KYYKSL+ LG KY ++LP    
Sbjct: 122 EFDVPIFCANFFTAASTNIVVLDLNPLHDVIHHRDYKDKYYKSLMPLGLKYTKLLPWGGR 181

Query: 187 LGRKAYERVVEIFL---------SHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINRE 246
           L  ++ +    I +          H  +   F+   +AWL+L++   EET  S++M N E
Sbjct: 182 LTSESIKFFSPIVIWTKFTSSQDKHDALYSAFMEYYKAWLKLMDQAVEETDVSQIMCNCE 241

Query: 247 AQHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDG 306
           AQHRYL WRAEKDPGHG+L+KLIGETLA DL+ NFLFNGI ELGSK+FL YFPEYCCEDG
Sbjct: 242 AQHRYLTWRAEKDPGHGVLKKLIGETLAADLLGNFLFNGIKELGSKKFLAYFPEYCCEDG 301

[Close]

BLAST of Lsi06G005530.1 vs. TAIR10
Match: AT3G09150.2 (AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2))

HSP 1 Score: 308.5 bits (789), Expect = 4.9e-84
Identity = 152/298 (51.01%), Postives = 205/298 (68.79%), Query Frame = 1


Query: 17  PFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKV 76
           P   N + + + KR  + +S++SY++F + AL+ET+    L PS LQEKY+SM  LD K 
Sbjct: 28  PNKINFTLRRRKKRFLLRVSAVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKT 87

Query: 77  KLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDL 136
           +L+ML+F++ KIRLLRS+ IE+ETMQV DFA F EPE+D PIFCAN FT+ + +IVVLDL
Sbjct: 88  ELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDL 147

Query: 137 NPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVEIFL---------S 196
           NPLH +  Q DY++KYY  ++ +  KYAE  P    L  ++ +    + +          
Sbjct: 148 NPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWGGKLTGESIKFFSPLVMWTRFSSSKEK 207

Query: 197 HCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIG 256
           H  +   FL   QAWLE+   + EE  PS +  N EAQH+YL WRA+KDPGHGLL++L+G
Sbjct: 208 HKALFSAFLEYYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVG 267

Query: 257 ETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRG 306
           E  AK+L+R+FLFNG+DELG+K F+DYFPEY  EDGT++ KRS+ GKSYE RPWD  G
Sbjct: 268 EAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTG 325

[Close]

BLAST of Lsi06G005530.1 vs. NCBI nr
Match: gi|449442567|ref|XP_004139053.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 1.7e-134
Identity = 244/311 (78.46%), Postives = 269/311 (86.50%), Query Frame = 1


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQ 63
           SSRL FSLSFN PPFS+NCSSKN+ KRAF PISSISYQKFVQFALDETKLHTHLFPSPLQ
Sbjct: 3   SSRLCFSLSFNSPPFSTNCSSKNRSKRAFFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  EKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANI 123
           EK+NSM+SLD+K KLEMLSF APKIRLLRSLNIESET+QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKSKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLP--AALTLGRKAYERV 183
           FTAA+SSIVVLDLNPLHDVI+QR YREKYYKSLLHLGTKYAE+LP    LT     +   
Sbjct: 123 FTAANSSIVVLDLNPLHDVISQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLKFFSP 182

Query: 184 VEIFLSHCDMD-------QVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAE 243
           + I+      +         F++  +AWLEL+NN  EETIP +LM+NREAQHRYL WRAE
Sbjct: 183 IVIWSKFSSTESKYDILFSAFMDYYKAWLELMNNTGEETIPPQLMVNREAQHRYLSWRAE 242

Query: 244 KDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGK 303
           KDPGH LLRKLIGETLAKD+VRNFLF+G+DELGSK+FLDYFPEYCCEDGTINTKRSMAGK
Sbjct: 243 KDPGHHLLRKLIGETLAKDVVRNFLFHGVDELGSKKFLDYFPEYCCEDGTINTKRSMAGK 302

Query: 304 SYEHRPWDKRG 306
           SYEHRPWD+RG
Sbjct: 303 SYEHRPWDERG 313

[Close]

BLAST of Lsi06G005530.1 vs. NCBI nr
Match: gi|659098972|ref|XP_008450371.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 8.3e-134
Identity = 245/311 (78.78%), Postives = 269/311 (86.50%), Query Frame = 1


Query: 4   SSRLSFSLSFNFPPFSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQ 63
           SSRLSFSLSFN PPFS+NC+SKN+ KRA  PISSISYQKFVQFALDETKLHTHLFPSPLQ
Sbjct: 3   SSRLSFSLSFNSPPFSTNCNSKNRFKRACFPISSISYQKFVQFALDETKLHTHLFPSPLQ 62

Query: 64  EKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANI 123
           EK+NSM+SLD+K KLEMLSF APKIRLLRSLNIESET+QVLDFAAFPEPEFD+PIFCANI
Sbjct: 63  EKHNSMLSLDQKAKLEMLSFHAPKIRLLRSLNIESETVQVLDFAAFPEPEFDIPIFCANI 122

Query: 124 FTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKAYERVVE 183
           FTAA+SSIVVLDLNPLHDVITQR YREKYYKSLLHLGTKYAE+LP    L  ++ +    
Sbjct: 123 FTAANSSIVVLDLNPLHDVITQRYYREKYYKSLLHLGTKYAELLPWGGKLTSESLKFFSP 182

Query: 184 IFL---------SHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAE 243
           I +          +  +   F++  +AWLEL+NN  EETIPS+LMINREAQHRYL WRAE
Sbjct: 183 IVIWSKFSSTESKYDILSSAFMDYYKAWLELMNNTVEETIPSQLMINREAQHRYLSWRAE 242

Query: 244 KDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGK 303
           KDPGH LLRKLIGETLAKD+V+NFLFNGIDELGSK FLDYFPEY CEDGTINTKRSMAGK
Sbjct: 243 KDPGHHLLRKLIGETLAKDVVQNFLFNGIDELGSKSFLDYFPEYRCEDGTINTKRSMAGK 302

Query: 304 SYEHRPWDKRG 306
           SYEHRPWD+RG
Sbjct: 303 SYEHRPWDERG 313

[Close]

BLAST of Lsi06G005530.1 vs. NCBI nr
Match: gi|645241793|ref|XP_008227246.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Prunus mume])

HSP 1 Score: 382.5 bits (981), Expect = 7.6e-103
Identity = 195/320 (60.94%), Postives = 238/320 (74.38%), Query Frame = 1


Query: 1   MGSSSRLSFSLSFNFPP------FSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLH 60
           M  SS LSF +     P      FSS CSS  K +   + +S+ SY+KF+ FALDETK H
Sbjct: 1   MECSSSLSFCIPKRPLPLIRTALFSSICSSSRKQQMPIVQLSATSYKKFINFALDETKRH 60

Query: 61  THLFPSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEF 120
           THL PSPLQE+YNS IS+D K ++EMLSF+A K+RLLRSL IES+TMQVLDFA FP+PEF
Sbjct: 61  THLAPSPLQERYNSRISMDGKSEIEMLSFEATKVRLLRSLCIESQTMQVLDFAVFPQPEF 120

Query: 121 DVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLG 180
           D+PIFCAN F++A+++IVVLDLNPLHDVI+QRDY+EKYYK L+ LG KYAE+LP    L 
Sbjct: 121 DMPIFCANFFSSANTNIVVLDLNPLHDVISQRDYKEKYYKGLIPLGLKYAELLPWGGKLT 180

Query: 181 RKA---------YERVVEIFLSHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQ 240
            ++         + R       +  +   F++  +AWLEL++    ET  S++M NREAQ
Sbjct: 181 GESLKFFSPIVIWTRFTSSSYKYDVLYSAFMDYYKAWLELMDQAVVETNASKIMCNREAQ 240

Query: 241 HRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTI 300
           HRYL WRAEKDPGHGLL+KLIGET AKDL+ NFLFNGIDELGSK FLDYFPEYCCEDGTI
Sbjct: 241 HRYLTWRAEKDPGHGLLKKLIGETQAKDLLANFLFNGIDELGSKSFLDYFPEYCCEDGTI 300

Query: 301 NTKRSMAGKSYEHRPWDKRG 306
           N  RS+ GKS+E RPWD++G
Sbjct: 301 NQSRSIIGKSFESRPWDRKG 320

[Close]

BLAST of Lsi06G005530.1 vs. NCBI nr
Match: gi|595863411|ref|XP_007211577.1| (hypothetical protein PRUPE_ppa008498mg [Prunus persica])

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 189/297 (63.64%), Postives = 229/297 (77.10%), Query Frame = 1


Query: 18  FSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKLHTHLFPSPLQEKYNSMISLDKKVK 77
           FSS CSS  K +   + +S+ISY+KF+  ALDETK HTHL PSPLQE+YNS IS+D K +
Sbjct: 24  FSSICSSSRKQQMPIVQLSAISYKKFINSALDETKRHTHLAPSPLQERYNSRISMDGKSE 83

Query: 78  LEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPEFDVPIFCANIFTAASSSIVVLDLN 137
           +EMLSF+A K+RLLRSL IES+TMQVLDFA FPEPEFD+PIFCAN F++A+++IVVLDLN
Sbjct: 84  IEMLSFEATKVRLLRSLCIESQTMQVLDFAVFPEPEFDMPIFCANFFSSANTNIVVLDLN 143

Query: 138 PLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTLGRKA---------YERVVEIFLSH 197
           PLHDVI+QRDY+EKYYK L+ LG KYAE+LP    L  ++         + R       +
Sbjct: 144 PLHDVISQRDYKEKYYKGLIPLGLKYAELLPWGGKLTSESLKFFSPIVIWTRFTSSSYKY 203

Query: 198 CDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREAQHRYLLWRAEKDPGHGLLRKLIGE 257
             +   F++  +AWLEL++    ET  S++M NREAQHRYL WRAEKDPGHGLL+KLIGE
Sbjct: 204 DVLYSAFMDYYKAWLELMDQAVVETNASKIMCNREAQHRYLTWRAEKDPGHGLLKKLIGE 263

Query: 258 TLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGTINTKRSMAGKSYEHRPWDKRG 306
           T AKDL+ NFLFNGIDELGSK FLDYFPEYCCEDGTIN  RS+ GKS+E RPWD +G
Sbjct: 264 TQAKDLLVNFLFNGIDELGSKSFLDYFPEYCCEDGTINQSRSIIGKSFESRPWDGKG 320

[Close]

BLAST of Lsi06G005530.1 vs. NCBI nr
Match: gi|1009175652|ref|XP_015869003.1| (PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 370.9 bits (951), Expect = 2.3e-99
Identity = 193/321 (60.12%), Postives = 238/321 (74.14%), Query Frame = 1


Query: 1   MGSSSRLSFSLSFNFPP-------FSSNCSSKNKCKRAFIPISSISYQKFVQFALDETKL 60
           M SSS LSF LS   PP         S+ SS  K KR  I IS++SY+KF+ FALDETK 
Sbjct: 12  MESSSSLSF-LSQQMPPPVTSRTIIFSSISSCWKQKRPSIQISAVSYRKFIHFALDETKR 71

Query: 61  HTHLFPSPLQEKYNSMISLDKKVKLEMLSFQAPKIRLLRSLNIESETMQVLDFAAFPEPE 120
           HTHL PSPLQE++NS+IS+D +V+L+M SF+APKIRLLRSL+IE+ETMQVLDF  FP+PE
Sbjct: 72  HTHLAPSPLQERFNSIISMDGEVELQMTSFEAPKIRLLRSLSIETETMQVLDFGVFPKPE 131

Query: 121 FDVPIFCANIFTAASSSIVVLDLNPLHDVITQRDYREKYYKSLLHLGTKYAEVLPAALTL 180
           +DVPIFCAN FT+ +++I++LDLNPLHDVI QR+Y+EKYYKSL+ LG KYAE+LP    L
Sbjct: 132 YDVPIFCANFFTSGNTNIILLDLNPLHDVINQREYKEKYYKSLMPLGVKYAELLPWGGKL 191

Query: 181 GRKAYERVVEIFL---------SHCDMDQVFLNRVQAWLELVNNIEEETIPSRLMINREA 240
             ++ +    I L          H  +   F++  +AWL L+    EET PS +  NREA
Sbjct: 192 TSESLKFFSPIVLWTKFASSEYKHDVLFSAFMDYYKAWLHLMEGAVEETDPSGIKCNREA 251

Query: 241 QHRYLLWRAEKDPGHGLLRKLIGETLAKDLVRNFLFNGIDELGSKRFLDYFPEYCCEDGT 300
           QHRYL WRAEKDPGH +L+KLIGET  KDL+RNFLF+GI +LGSK FLDYFPEY CEDGT
Sbjct: 252 QHRYLTWRAEKDPGHRVLQKLIGETQTKDLLRNFLFHGIVQLGSKNFLDYFPEYRCEDGT 311

Query: 301 INTKRSMAGKSYEHRPWDKRG 306
           IN +R++ GKS+E RPWD RG
Sbjct: 312 INERRTIIGKSFESRPWDTRG 331

The following BLAST results are available for this feature:

BLAST of Lsi06G005530.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFBS_ARATH	8.7e-83	51.01	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thalian...	[more]
PEBB_TRIEI	3.4e-18	26.89	Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain ...	[more]
PEBB_NOSP7	6.3e-17	25.21	Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 2...	[more]
PEBB_GLOVI	5.9e-15	27.31	Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain PCC...	[more]
PEBA_SYNPY	5.4e-08	23.61	15,16-dihydrobiliverdin:ferredoxin oxidoreductase OS=Synechococcus sp. (strain W...	[more]

BLAST of Lsi06G005530.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG3_CUCSA	1.2e-134	78.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G616870 PE=4 SV=1	[more]
M5WHM5_PRUPE	1.2e-102	63.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008498mg PE=4 SV=1	[more]
F6HA07_VITVI	8.7e-98	57.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03770 PE=4 SV=...	[more]
A0A0D2W9D9_GOSRA	5.6e-97	57.94	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G252400 PE=4 SV=1	[more]
V4U5W4_9ROSI	9.6e-97	56.83	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015899mg PE=4 SV=1	[more]

BLAST of Lsi06G005530.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09150.2	4.9e-84	51.01	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochrom...	[more]

BLAST of Lsi06G005530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442567\|ref\|XP_004139053.1\|	1.7e-134	78.46	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sa...	[more]
gi\|659098972\|ref\|XP_008450371.1\|	8.3e-134	78.78	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis me...	[more]
gi\|645241793\|ref\|XP_008227246.1\|	7.6e-103	60.94	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Prunus mum...	[more]
gi\|595863411\|ref\|XP_007211577.1\|	1.7e-102	63.64	hypothetical protein PRUPE_ppa008498mg [Prunus persica]	[more]
gi\|1009175652\|ref\|XP_015869003.1\|	2.3e-99	60.12	PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like [Zizip...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0010024	phytochromobilin biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0050897	cobalt ion binding
GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor

Vocabulary: **INTERPRO**
Term	Definition
IPR009249	Ferredoxin-dep_bilin_Rdtase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010024	phytochromobilin biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G005530	Lsi06G005530	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G005530.1	Lsi06G005530.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G005530.1.CDS.9	Lsi06G005530.1.CDS.9	CDS
Lsi06G005530.1.CDS.8	Lsi06G005530.1.CDS.8	CDS
Lsi06G005530.1.CDS.7	Lsi06G005530.1.CDS.7	CDS
Lsi06G005530.1.CDS.6	Lsi06G005530.1.CDS.6	CDS
Lsi06G005530.1.CDS.5	Lsi06G005530.1.CDS.5	CDS
Lsi06G005530.1.CDS.4	Lsi06G005530.1.CDS.4	CDS
Lsi06G005530.1.CDS.3	Lsi06G005530.1.CDS.3	CDS
Lsi06G005530.1.CDS.2	Lsi06G005530.1.CDS.2	CDS
Lsi06G005530.1.CDS.1	Lsi06G005530.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G005530.1.five_prime_UTR.1	Lsi06G005530.1.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009249	Ferredoxin-dependent bilin reductase	PFAM	PF05996	Fe_bilin_red	coord: 48..261 score: 4.2
None	No IPR available	PANTHER	PTHR34557	FAMILY NOT NAMED	coord: 18..315 score: 1.6E
None	No IPR available	PANTHER	PTHR34557:SF1	PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTIC	coord: 18..315 score: 1.6E