Lsi06G001520.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G001520.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Pentatricopeptide repeat-containing family protein
Location	chr06 : 1619695 .. 1621074 (+)
Sequence length	1380

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACAGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTGTACTTAATACATTTCCAATTGCTTAGCACTTTCAGTCCAAACAAATCTGACTATGTGAGTCATCATAAACAACGTGAAAAGCTCCGTGAACACATTCCTTTTGTCACCGATGTTAAAGAGGTGAAGGACCCATGTGAGGCAATGGCTCTCTTCGAGGATTATCGTGAAAGGGGCTTCAAACACCACTATCCTTCCTACTCATCTCTCATTTACAAGTTGGCTCGTTCTCGTAGATTTGAAGCTGTTGAGACAATTCTTGGTCATTTACAAAGTAGGAACATTCGCTGTGGTGAGACCCTTTTCGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTAGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGCTTTCGTACTCTACAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGCTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGTCCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGGATGGGAACAAGCATGTAACTTGTTTGACGAAATGCTTGAGAAGAGAGTGCAACCTAGTGTAGTAACATACAATAGTTTTTTAGGGGTTTTATGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGACTCAGAAAGGACATCATCCAAATGCTATTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAAGAAGCCAAAAAGTTGATGTTTGATATGGAGTTTCGTGGTTGTAAACTGCGGCCTGTGAACTACGGTGTTTTAATGACACATCTAGGAAAGACAGGGAACATCGACGAGATGGAATCTTTACTTAATGAGATGAAGAAAAGACGGTTGAAGCCTGATGTCGTGACTTACAATATTCTTGTAAATTACTTGTGCAAAGAAGGAAAGATTGGGGATGCTTATAAGGTTTTGATTAAAATGCAAGTTGGAGGTTGTGATCCTAATGCAGCAACTTACAGGATGATGATTGATGGATTTTGTAATGCAGGGGATTTTGATGGGGCTATGAAGGTTTTGAATGCCATGTTGATGAGTGGGCATTGTCCTCATTTGCAAACTTTTGTTTTTCTAGTTCTTGGCCTTTTGAAAGGTGAAAACAAGGATTATGTTTGCTTTGTATTGGAGGAGATGGAAAAGAGACAGCTGAGGTTTGATGCTGAAACTTGGAGGATTTTGGTTATGGATGCTTGTGGTCAACATGTTGAAATAGGTAACCACATAAATGACTTGATCTCCTTGCACTGA

mRNA sequence

ATGATACAGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTGTACTTAATACATTTCCAATTGCTTAGCACTTTCAGTCCAAACAAATCTGACTATGTGAGTCATCATAAACAACGTGAAAAGCTCCGTGAACACATTCCTTTTGTCACCGATGTTAAAGAGGTGAAGGACCCATGTGAGGCAATGGCTCTCTTCGAGGATTATCGTGAAAGGGGCTTCAAACACCACTATCCTTCCTACTCATCTCTCATTTACAAGTTGGCTCGTTCTCGTAGATTTGAAGCTGTTGAGACAATTCTTGGTCATTTACAAAGTAGGAACATTCGCTGTGGTGAGACCCTTTTCGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTAGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGCTTTCGTACTCTACAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGCTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGTCCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGGATGGGAACAAGCATGTAACTTGTTTGACGAAATGCTTGAGAAGAGAGTGCAACCTAGTGTAGTAACATACAATAGTTTTTTAGGGGTTTTATGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGACTCAGAAAGGACATCATCCAAATGCTATTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAAGAAGCCAAAAAGTTGATGTTTGATATGGAGTTTCGTGGTTGTAAACTGCGGCCTGTGAACTACGGTGTTTTAATGACACATCTAGGAAAGACAGGGAACATCGACGAGATGGAATCTTTACTTAATGAGATGAAGAAAAGACGGTTGAAGCCTGATGTCGTGACTTACAATATTCTTGTAAATTACTTGTGCAAAGAAGGAAAGATTGGGGATGCTTATAAGGTTTTGATTAAAATGCAAGTTGGAGGTTGTGATCCTAATGCAGCAACTTACAGGATGATGATTGATGGATTTTGTAATGCAGGGGATTTTGATGGGGCTATGAAGGTTTTGAATGCCATGTTGATGAGTGGGCATTGTCCTCATTTGCAAACTTTTGTTTTTCTAGTTCTTGGCCTTTTGAAAGGTGAAAACAAGGATTATGTTTGCTTTGTATTGGAGGAGATGGAAAAGAGACAGCTGAGGTTTGATGCTGAAACTTGGAGGATTTTGGTTATGGATGCTTGTGGTCAACATGTTGAAATAGGTAACCACATAAATGACTTGATCTCCTTGCACTGA

Coding sequence (CDS)

ATGATACAGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTGTACTTAATACATTTCCAATTGCTTAGCACTTTCAGTCCAAACAAATCTGACTATGTGAGTCATCATAAACAACGTGAAAAGCTCCGTGAACACATTCCTTTTGTCACCGATGTTAAAGAGGTGAAGGACCCATGTGAGGCAATGGCTCTCTTCGAGGATTATCGTGAAAGGGGCTTCAAACACCACTATCCTTCCTACTCATCTCTCATTTACAAGTTGGCTCGTTCTCGTAGATTTGAAGCTGTTGAGACAATTCTTGGTCATTTACAAAGTAGGAACATTCGCTGTGGTGAGACCCTTTTCGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTAGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGCTTTCGTACTCTACAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGCTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGTCCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGGATGGGAACAAGCATGTAACTTGTTTGACGAAATGCTTGAGAAGAGAGTGCAACCTAGTGTAGTAACATACAATAGTTTTTTAGGGGTTTTATGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGACTCAGAAAGGACATCATCCAAATGCTATTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAAGAAGCCAAAAAGTTGATGTTTGATATGGAGTTTCGTGGTTGTAAACTGCGGCCTGTGAACTACGGTGTTTTAATGACACATCTAGGAAAGACAGGGAACATCGACGAGATGGAATCTTTACTTAATGAGATGAAGAAAAGACGGTTGAAGCCTGATGTCGTGACTTACAATATTCTTGTAAATTACTTGTGCAAAGAAGGAAAGATTGGGGATGCTTATAAGGTTTTGATTAAAATGCAAGTTGGAGGTTGTGATCCTAATGCAGCAACTTACAGGATGATGATTGATGGATTTTGTAATGCAGGGGATTTTGATGGGGCTATGAAGGTTTTGAATGCCATGTTGATGAGTGGGCATTGTCCTCATTTGCAAACTTTTGTTTTTCTAGTTCTTGGCCTTTTGAAAGGTGAAAACAAGGATTATGTTTGCTTTGTATTGGAGGAGATGGAAAAGAGACAGCTGAGGTTTGATGCTGAAACTTGGAGGATTTTGGTTATGGATGCTTGTGGTCAACATGTTGAAATAGGTAACCACATAAATGACTTGATCTCCTTGCACTGA

Protein sequence

MIQKLIKGSRLLVFHRNVYLIHFQLLSTFSPNKSDYVSHHKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVMDACGQHVEIGNHINDLISLH

Homology

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BLAST of Lsi06G001520.1 vs. Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-140
Identity = 245/423 (57.92%), Postives = 307/423 (72.58%), Query Frame = 1


Query: 22  HFQLLSTFSPNK--SDYVSHHKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKH 81
           H+       P K  S +   HK   K  E +PF+TD+KE++DP EA++LF  Y+E GF+H
Sbjct: 20  HYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRH 79

Query: 82  HYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELF 141
            YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYGKA  V+K I++F
Sbjct: 80  DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139

Query: 142 HRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKK 201
           H++ SF+C RT+QSLN L+N LVD  +L KA   F  A +M  RPNSVS+NI+IKG++ K
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199

Query: 202 GGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITY 261
             WE AC +FDEMLE  VQPSVVTYNS +G LCRN +M  A  L E+M +K   PNA+T+
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259

Query: 262 ALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKK 321
            LLM+G C  G+Y EAKKLMFDME+RGCK   VNYG+LM+ LGK G IDE + LL EMKK
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319

Query: 322 RRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDG 381
           RR+KPDVV YNILVN+LC E ++ +AY+VL +MQ+ GC PNAATYRMMIDGFC   DFD 
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379

Query: 382 AMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVM 441
            + VLNAML S HCP   TFV +V GL+KG N D+ CFVLE M K+ L F +  W+ L+ 
Sbjct: 380 GLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439

Query: 442 DAC 443
           D C
Sbjct: 440 DLC 442

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BLAST of Lsi06G001520.1 vs. Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.9e-52
Identity = 114/366 (31.15%), Postives = 200/366 (54.64%), Query Frame = 1


Query: 76  GFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRN--IRCGETLFVALIQHYGKAHLVE 135
           GF H+Y +Y S+++KL+R+R F+ VE+++  L++    I+CGE LF+ L+++YG A   E
Sbjct: 78  GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYE 137

Query: 136 KGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYE-MGFRPNSVSYNIM 195
             + +F R+P F   R+++SLN LLN L+   +      +F+ + E  G  PN  + N++
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197

Query: 196 IKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGH 255
           +K   KK   E A  + DE+    + P++VTY + LG     G+M++A  + E M  +G 
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257

Query: 256 HPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMES 315
           +P+A TY +LM+G+C +G++ EA  +M DME    +   V YGV++  L K     E  +
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317

Query: 316 LLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFC 375
           + +EM +R   PD      +++ LC++ K+ +A  +  KM    C P+ A    +I   C
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377

Query: 376 NAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAE 435
             G    A K+ +     G  P L T+  L+ G+ +         + ++M +R+ + +A 
Sbjct: 378 KEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 437

Query: 436 TWRILV 439
           T+ +L+
Sbjct: 438 TYNVLI 442

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BLAST of Lsi06G001520.1 vs. Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-46
Identity = 115/375 (30.67%), Postives = 194/375 (51.73%), Query Frame = 1


Query: 56  VKEVKDPCEAMALFED------YRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQS 115
           ++   DP  AM LF +        +R F++    Y  +I KL  S+ F+ ++ +L HL++
Sbjct: 16  LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75

Query: 116 -RNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLS 175
              I   E +F  +I  +G+  L  + + +F  MP + C RT++SLN LL+ L+ C +L 
Sbjct: 76  DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELE 135

Query: 176 KASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFL 235
           K  E      E G +P++ +YNI+I G  + G ++ A  LFDEM++K+V+P+ VT+ + +
Sbjct: 136 KMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 195

Query: 236 GVLCRNGEMDTALCLFENMTQK-GHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGC 295
             LC++  +  AL +  +M +  G  P    YA L++  C IG+   A KL  +      
Sbjct: 196 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 255

Query: 296 KLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYK 355
           K+    Y  L++ L K G  +E+  +L EM ++  KPD VTYN+L+N  C E     A +
Sbjct: 256 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 315

Query: 356 VLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLL 415
           VL +M   G  P+  +Y M++  F     ++ A  +   M   G  P   ++  +  GL 
Sbjct: 316 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 375

Query: 416 KGENKDYVCFVLEEM 423
           +G   +    +L+EM
Sbjct: 376 EGLQFEEAAVILDEM 389

[Close]

BLAST of Lsi06G001520.1 vs. Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-45
Identity = 107/377 (28.38%), Postives = 184/377 (48.81%), Query Frame = 1


Query: 66  MALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQH 125
           +AL +    +G  H   + S +I    R R+     + +G +          +F  L+  
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167

Query: 126 YGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPN 185
                 V + +EL  RM       TL +LN L+N L    ++S A  +  +  E GF+PN
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227

Query: 186 SVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFE 245
            V+Y  ++    K G    A  L  +M E+ ++   V Y+  +  LC++G +D A  LF 
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287

Query: 246 NMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTG 305
            M  KG   + ITY  L+ G+C  G++ +  KL+ DM  R      V + VL+    K G
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347

Query: 306 NIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYR 365
            + E + LL EM +R + P+ +TYN L++  CKE ++ +A +++  M   GCDP+  T+ 
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407

Query: 366 MMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKR 425
           ++I+G+C A   D  +++   M + G   +  T+  LV G  +    +    + +EM  R
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467

Query: 426 QLRFDAETWRILVMDAC 443
           ++R D  +++IL+   C
Sbjct: 468 RVRPDIVSYKILLDGLC 484

[Close]

BLAST of Lsi06G001520.1 vs. Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-44
Identity = 120/416 (28.85%), Postives = 219/416 (52.64%), Query Frame = 1


Query: 43  REKLREHIPFVTDVKEVKDPCEAMALFEDY-RERGFKHHYPSYSSLIYKLARSRRFEAVE 102
           + K   H   V+ +K  +DP   + +F    +++GF H+  +YS L+  L R ++F AV+
Sbjct: 50  KTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVD 109

Query: 103 TILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFR-TLQSLNVLLNT 162
            IL  ++    R  E+LF+ L++H+ ++ L +K +E+F+ +      + +L +++  LN 
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169

Query: 163 LVDCDQLSKASEIFQQA-YEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQ- 222
           L+D  +++ + ++   A + +G +PN+  +NI++K   K G    A  + +EM    +  
Sbjct: 170 LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISY 229

Query: 223 PSVVTYNSFLGVLCRNGEMDTALCLFENMTQK-GHHPNAITYALLMEGWCFIGKYKEAKK 282
           P+ +TY++ +  L  +     A+ LFE+M  K G  P+ +T+ +++ G+C  G+ + AKK
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289

Query: 283 LMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLC 342
           ++  M+  GC     NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349

Query: 343 KEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQ 402
           + G+  +A K+L +M+   C  +  TY +++ G  + G  + A+++L+     G   HL 
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG--VHLN 409

Query: 403 TFVF-LVLGLL--KGENKDYVCFVLEEMEKRQLRFDAETWRILVMDAC-GQHVEIG 450
              + ++L  L   GE +  V F L  M +R +     TW  LV+  C   + EIG
Sbjct: 410 KGSYRIILNALCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIG 462

[Close]

BLAST of Lsi06G001520.1 vs. TrEMBL
Match: A0A0A0M1K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570750 PE=4 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 4.4e-249
Identity = 415/459 (90.41%), Postives = 438/459 (95.42%), Query Frame = 1


Query: 1   MIQKLIKGSRLLVFHRNVYLIHFQLLSTFSPNKSDYVSHHKQREKLREHIPFVTDVKEVK 60
           MIQKLIK SRLL+FHRNV LI FQLLSTFSPNK D+ ++HKQR K+RE IPFVTDVKEVK
Sbjct: 1   MIQKLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNHKQRRKIRERIPFVTDVKEVK 60

Query: 61  DPCEAMALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFV 120
           DPCEA+ALFE+Y E+GFKHHYPSYSSLIYKLARSRRFEAVETILGHL++RNIRC ETLFV
Sbjct: 61  DPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120

Query: 121 ALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEM 180
           ALIQHYGKAHLVEKGIELFH+MPSFNCFRTLQS NVLLNTLVDCDQ SKASEIFQQAYEM
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEM 180

Query: 181 GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTA 240
            FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK VQPSVVTYNSFLGVLCR GEMDTA
Sbjct: 181 DFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTA 240

Query: 241 LCLFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTH 300
           LCLF+NMT+KGHHPNA+TYALLMEGWCFIGKYKEAKKLMFDMEF GCKLRPVNYGVLMTH
Sbjct: 241 LCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTH 300

Query: 301 LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPN 360
           LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGK+GDAYKVL+KMQVGGCDPN
Sbjct: 301 LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360

Query: 361 AATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENK-DYVCFVL 420
           AATYRMMIDG+CNAGDFDGAMK+LNAMLMSGH PHL+TF  LV+GLLKGEN  DYVCFVL
Sbjct: 361 AATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVL 420

Query: 421 EEMEKRQLRFDAETWRILVMDACGQHVEIGNHINDLISL 459
           EEMEKRQLRFDAETWRIL+MD CGQHVEIG+H+NDLISL
Sbjct: 421 EEMEKRQLRFDAETWRILIMDVCGQHVEIGSHLNDLISL 459

[Close]

BLAST of Lsi06G001520.1 vs. TrEMBL
Match: M5W9F4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015993mg PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 4.2e-159
Identity = 276/434 (63.59%), Postives = 337/434 (77.65%), Query Frame = 1


Query: 28  TFSPNKSDYVSH----HKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKHHYPS 87
           TF PNK          H+   KLR  IPFV+DVKEV+DP E ++LF +Y + GFKH YPS
Sbjct: 32  TFRPNKPKTKPRRERLHRDTTKLRRPIPFVSDVKEVEDPEEGLSLFYEYHQMGFKHDYPS 91

Query: 88  YSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMP 147
           YS+L+YKLARSR FEAVETILGH++ RNI C +TLF+ALIQHYGKA+LVEK IELF++MP
Sbjct: 92  YSALLYKLARSRNFEAVETILGHVRDRNIHCKDTLFIALIQHYGKANLVEKAIELFNQMP 151

Query: 148 SFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWE 207
           SFNC RTLQ+ N LLN LVD  +  +A EIF +  +MG RPNS+SYNIM+KGW++KG  E
Sbjct: 152 SFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGLRPNSISYNIMMKGWLQKGDGE 211

Query: 208 QACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITYALLM 267
           +AC +FDEMLEK+VQPSVVTYNS +G   R GE++ A  L E+M QKG +PNA+TYALLM
Sbjct: 212 EACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALLM 271

Query: 268 EGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 327
           EG+C +GK++EAKK+MFDME+RGCK R +NYGVLM+ LG+ G IDE +SLL EMKKRR K
Sbjct: 272 EGFCMLGKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRFK 331

Query: 328 PDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKV 387
           PDVV YNIL+N+LCKEG+  +AYKVLI+MQVGGC PNAATYRMM+DGFC   DF+G +KV
Sbjct: 332 PDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRMMVDGFCQIEDFEGGLKV 391

Query: 388 LNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVMDACG 447
           L AML S HCP L+TF  LV GL+K    D    VLEEMEKR ++F  E W  LV+DACG
Sbjct: 392 LIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVDACG 451

Query: 448 QHVEIGNHINDLIS 458
           ++V  G  + +LIS
Sbjct: 452 ENVVAGEVVTELIS 465

[Close]

BLAST of Lsi06G001520.1 vs. TrEMBL
Match: A0A061GWH8_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_041916 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 8.8e-157
Identity = 275/453 (60.71%), Postives = 343/453 (75.72%), Query Frame = 1


Query: 10  RLLVFHRNVYLIHFQLLSTFSPNKSDYVSHHKQREKLREHI-------PFVTDVKEVKDP 69
           R+LV H  +   H +   TF P K      H+  +K  ++        PFVT++KE+++P
Sbjct: 494 RILVKHFVIIHRHSKHYHTFGPKKPTTKPDHETPQKTTKNRRRKWPPNPFVTNLKEIQEP 553

Query: 70  CEAMALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVAL 129
            EA++LF +Y + G+KH YPSYSSLIYKLA+SR FEAVET+LG+LQ+ NI C ETLF AL
Sbjct: 554 DEALSLFHEYYQMGYKHDYPSYSSLIYKLAKSRNFEAVETLLGYLQNLNIHCQETLFNAL 613

Query: 130 IQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGF 189
            + YGKA L+EK IELFH+MPSFNC RT+QSLN +LN LVD D+   A  IF ++ +MGF
Sbjct: 614 FESYGKARLIEKAIELFHKMPSFNCVRTVQSLNSVLNALVDNDRFFDAKVIFDKSPKMGF 673

Query: 190 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALC 249
           RPNS ++N+MIKG +K+  +++AC LFDEMLE+ V+PSVVTYNSF+G LC+ GEM+ A  
Sbjct: 674 RPNSTTFNVMIKGLLKREAFDEACCLFDEMLERNVEPSVVTYNSFIGFLCKKGEMENAEG 733

Query: 250 LFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLG 309
           L E+M +KG +PNA+TYALLMEG C +GKYKEAKKLMFDME++GCK + +N+GVLMT+LG
Sbjct: 734 LVEDMVKKGKYPNAVTYALLMEGLCSLGKYKEAKKLMFDMEYKGCKTKVINFGVLMTYLG 793

Query: 310 KTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAA 369
           K G I+E +SLL EMKKRR KPDVV YNILVNYLCKEG++G+AYKVLI+MQV GC+PNAA
Sbjct: 794 KRGEIEEAKSLLREMKKRRFKPDVVIYNILVNYLCKEGRVGEAYKVLIEMQVKGCEPNAA 853

Query: 370 TYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEM 429
           TYRMM+DGFC  GD +GA+KVLN M  SGHCP L+T   LV GLLK    D  CFVLEEM
Sbjct: 854 TYRMMVDGFCMVGDLEGALKVLNVMFTSGHCPRLETLCQLVTGLLKCGKIDGACFVLEEM 913

Query: 430 EKRQLRFDAETWRILVMDACGQHVEIGNHINDL 456
           EKR++ FD E W  LV DACG     G+  NDL
Sbjct: 914 EKRKMSFDLEAWGALVRDACG-----GDDTNDL 941

[Close]

BLAST of Lsi06G001520.1 vs. TrEMBL
Match: W9SCB5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010855 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 3.7e-155
Identity = 260/426 (61.03%), Postives = 340/426 (79.81%), Query Frame = 1


Query: 33  KSDYVSHHKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRER-GFKHHYPSYSSLIYKL 92
           K  +   HK   +LR+  PFV++VK+ +DP EA++LF+DY++  GFKH Y SYS+LIYKL
Sbjct: 34  KPSHERSHKATTELRKPTPFVSNVKQAQDPEEALSLFQDYQQNIGFKHDYASYSALIYKL 93

Query: 93  ARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRTL 152
           AR R FEAVETIL H+Q RNIRCGE +F+ L+QHYGKA+LV+K IELF R+PSFNC RTL
Sbjct: 94  ARFRDFEAVETILDHVQDRNIRCGEKVFIVLMQHYGKANLVDKAIELFRRIPSFNCVRTL 153

Query: 153 QSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDE 212
           QSLN LLN LVD  + S+A+++F ++Y+MGFRPNS+++NI+IKG ++KG WE+A  +FDE
Sbjct: 154 QSLNALLNVLVDGGRFSEANDVFYRSYKMGFRPNSITFNIIIKGCLRKGDWEEASKVFDE 213

Query: 213 MLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITYALLMEGWCFIGK 272
           MLE+ VQPSVVTYNS +G LC+ GE+D A  L E+M +KG  PNA+TYAL+MEG C +GK
Sbjct: 214 MLERSVQPSVVTYNSLIGYLCKKGELDKAKGLLEDMIEKGKCPNAVTYALMMEGLCSVGK 273

Query: 273 YKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNI 332
           YKEAKKLMFDME+RGCK + VN+G+LMT LG+ GNI+E + LLNEMK+RR KPDVV YNI
Sbjct: 274 YKEAKKLMFDMEYRGCKPKLVNFGILMTDLGRRGNIEEAKLLLNEMKRRRFKPDVVIYNI 333

Query: 333 LVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSG 392
           L+NYLC+EGK   A+K+L +MQ+GGC+PNAATYR+M+DGFC  GDF+  +KVLNAML S 
Sbjct: 334 LINYLCREGKAVAAHKILTEMQIGGCEPNAATYRVMVDGFCQVGDFERGLKVLNAMLTSR 393

Query: 393 HCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVMDACGQHVEIGNH 452
           HCP L++F  L++GL+K  N +  CFVLEEM KR+++FD E W  LV++ACG++      
Sbjct: 394 HCPRLESFRCLIMGLVKCGNLEDACFVLEEMGKRKMQFDLEGWDALVVEACGRNSGADGL 453

Query: 453 INDLIS 458
           + +LI+
Sbjct: 454 VTELIT 459

[Close]

BLAST of Lsi06G001520.1 vs. TrEMBL
Match: M5WNJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017156mg PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 6.9e-154
Identity = 274/447 (61.30%), Postives = 334/447 (74.72%), Query Frame = 1


Query: 28  TFSPNKSDYVSH----HKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKHHYPS 87
           TF PNK     H    H+   KLR  IPFV+DVKEV+DP EA++LF +Y + GFKH YPS
Sbjct: 32  TFRPNKPKTKPHRERLHRDTTKLRRPIPFVSDVKEVEDPEEALSLFYEYHQMGFKHDYPS 91

Query: 88  YSSLIYKLARSRRFEAVETILGHLQSRNIRCGE-------------TLFVALIQHYGKAH 147
           YS+L+YKLARSR FEA E ILG   SR ++  E             TLF+ALIQHYGKA+
Sbjct: 92  YSALLYKLARSRNFEAGENILGREWSRRLQSFENERACREEQSKKDTLFIALIQHYGKAN 151

Query: 148 LVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYN 207
           LVEK IELF++MPSFNC RTLQ+ N LLN LVD  +  +A EIF +  +MGFRPNS+SYN
Sbjct: 152 LVEKAIELFNQMPSFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGFRPNSISYN 211

Query: 208 IMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQK 267
           IM+KGW++KG  E+AC +FDEMLEK+VQPSVVTYNS +G   R GE++ A  L E+M QK
Sbjct: 212 IMMKGWLQKGDGEEACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQK 271

Query: 268 GHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEM 327
           G +PNA+TYALLMEG+C +GK+ EAKK+MFDME+RGCK R +NYGVL++ LG+ G IDE 
Sbjct: 272 GKYPNAVTYALLMEGFCMLGKHDEAKKMMFDMEYRGCKPRLLNYGVLISDLGRRGKIDEA 331

Query: 328 ESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDG 387
           +SLL EMKKR  KPDVV YNIL+N+LCKEG+  +AYKVLI+MQVGGC PNAATYRMM+DG
Sbjct: 332 KSLLQEMKKRLFKPDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRMMVDG 391

Query: 388 FCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFD 447
           FC   DF+G +KVL AML S HCP L+TF  LV GL+K    D  C VLEEMEKR ++F 
Sbjct: 392 FCQIDDFEGGLKVLIAMLTSRHCPRLETFECLVTGLVKCGKIDDACVVLEEMEKRNMQFC 451

Query: 448 AETWRILVMDACGQHVEIGNHINDLIS 458
            E W  LV+DACG++V  G  + +LIS
Sbjct: 452 FEAWEALVVDACGENVVAGEVVTELIS 478

[Close]

BLAST of Lsi06G001520.1 vs. TAIR10
Match: AT1G07740.1 (AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 500.7 bits (1288), Expect = 9.3e-142
Identity = 245/423 (57.92%), Postives = 307/423 (72.58%), Query Frame = 1


Query: 22  HFQLLSTFSPNK--SDYVSHHKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKH 81
           H+       P K  S +   HK   K  E +PF+TD+KE++DP EA++LF  Y+E GF+H
Sbjct: 20  HYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRH 79

Query: 82  HYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELF 141
            YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYGKA  V+K I++F
Sbjct: 80  DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139

Query: 142 HRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKK 201
           H++ SF+C RT+QSLN L+N LVD  +L KA   F  A +M  RPNSVS+NI+IKG++ K
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199

Query: 202 GGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITY 261
             WE AC +FDEMLE  VQPSVVTYNS +G LCRN +M  A  L E+M +K   PNA+T+
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259

Query: 262 ALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKK 321
            LLM+G C  G+Y EAKKLMFDME+RGCK   VNYG+LM+ LGK G IDE + LL EMKK
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319

Query: 322 RRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDG 381
           RR+KPDVV YNILVN+LC E ++ +AY+VL +MQ+ GC PNAATYRMMIDGFC   DFD 
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379

Query: 382 AMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVM 441
            + VLNAML S HCP   TFV +V GL+KG N D+ CFVLE M K+ L F +  W+ L+ 
Sbjct: 380 GLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439

Query: 442 DAC 443
           D C
Sbjct: 440 DLC 442

[Close]

BLAST of Lsi06G001520.1 vs. TAIR10
Match: AT5G16420.1 (AT5G16420.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-53
Identity = 114/366 (31.15%), Postives = 200/366 (54.64%), Query Frame = 1


Query: 76  GFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRN--IRCGETLFVALIQHYGKAHLVE 135
           GF H+Y +Y S+++KL+R+R F+ VE+++  L++    I+CGE LF+ L+++YG A   E
Sbjct: 78  GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYE 137

Query: 136 KGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYE-MGFRPNSVSYNIM 195
             + +F R+P F   R+++SLN LLN L+   +      +F+ + E  G  PN  + N++
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197

Query: 196 IKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGH 255
           +K   KK   E A  + DE+    + P++VTY + LG     G+M++A  + E M  +G 
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257

Query: 256 HPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMES 315
           +P+A TY +LM+G+C +G++ EA  +M DME    +   V YGV++  L K     E  +
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317

Query: 316 LLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFC 375
           + +EM +R   PD      +++ LC++ K+ +A  +  KM    C P+ A    +I   C
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377

Query: 376 NAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAE 435
             G    A K+ +     G  P L T+  L+ G+ +         + ++M +R+ + +A 
Sbjct: 378 KEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 437

Query: 436 TWRILV 439
           T+ +L+
Sbjct: 438 TYNVLI 442

[Close]

BLAST of Lsi06G001520.1 vs. TAIR10
Match: AT1G53330.1 (AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-47
Identity = 115/375 (30.67%), Postives = 194/375 (51.73%), Query Frame = 1


Query: 56  VKEVKDPCEAMALFED------YRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQS 115
           ++   DP  AM LF +        +R F++    Y  +I KL  S+ F+ ++ +L HL++
Sbjct: 16  LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75

Query: 116 -RNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLS 175
              I   E +F  +I  +G+  L  + + +F  MP + C RT++SLN LL+ L+ C +L 
Sbjct: 76  DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELE 135

Query: 176 KASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFL 235
           K  E      E G +P++ +YNI+I G  + G ++ A  LFDEM++K+V+P+ VT+ + +
Sbjct: 136 KMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 195

Query: 236 GVLCRNGEMDTALCLFENMTQK-GHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGC 295
             LC++  +  AL +  +M +  G  P    YA L++  C IG+   A KL  +      
Sbjct: 196 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 255

Query: 296 KLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYK 355
           K+    Y  L++ L K G  +E+  +L EM ++  KPD VTYN+L+N  C E     A +
Sbjct: 256 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 315

Query: 356 VLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLL 415
           VL +M   G  P+  +Y M++  F     ++ A  +   M   G  P   ++  +  GL 
Sbjct: 316 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 375

Query: 416 KGENKDYVCFVLEEM 423
           +G   +    +L+EM
Sbjct: 376 EGLQFEEAAVILDEM 389

[Close]

BLAST of Lsi06G001520.1 vs. TAIR10
Match: AT1G12775.1 (AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-46
Identity = 107/377 (28.38%), Postives = 184/377 (48.81%), Query Frame = 1


Query: 66  MALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQH 125
           +AL +    +G  H   + S +I    R R+     + +G +          +F  L+  
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167

Query: 126 YGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPN 185
                 V + +EL  RM       TL +LN L+N L    ++S A  +  +  E GF+PN
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227

Query: 186 SVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFE 245
            V+Y  ++    K G    A  L  +M E+ ++   V Y+  +  LC++G +D A  LF 
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287

Query: 246 NMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTG 305
            M  KG   + ITY  L+ G+C  G++ +  KL+ DM  R      V + VL+    K G
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347

Query: 306 NIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYR 365
            + E + LL EM +R + P+ +TYN L++  CKE ++ +A +++  M   GCDP+  T+ 
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407

Query: 366 MMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKR 425
           ++I+G+C A   D  +++   M + G   +  T+  LV G  +    +    + +EM  R
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467

Query: 426 QLRFDAETWRILVMDAC 443
           ++R D  +++IL+   C
Sbjct: 468 RVRPDIVSYKILLDGLC 484

[Close]

BLAST of Lsi06G001520.1 vs. TAIR10
Match: AT5G18475.1 (AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-45
Identity = 120/416 (28.85%), Postives = 219/416 (52.64%), Query Frame = 1


Query: 43  REKLREHIPFVTDVKEVKDPCEAMALFEDY-RERGFKHHYPSYSSLIYKLARSRRFEAVE 102
           + K   H   V+ +K  +DP   + +F    +++GF H+  +YS L+  L R ++F AV+
Sbjct: 50  KTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVD 109

Query: 103 TILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFR-TLQSLNVLLNT 162
            IL  ++    R  E+LF+ L++H+ ++ L +K +E+F+ +      + +L +++  LN 
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169

Query: 163 LVDCDQLSKASEIFQQA-YEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQ- 222
           L+D  +++ + ++   A + +G +PN+  +NI++K   K G    A  + +EM    +  
Sbjct: 170 LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISY 229

Query: 223 PSVVTYNSFLGVLCRNGEMDTALCLFENMTQK-GHHPNAITYALLMEGWCFIGKYKEAKK 282
           P+ +TY++ +  L  +     A+ LFE+M  K G  P+ +T+ +++ G+C  G+ + AKK
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289

Query: 283 LMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLC 342
           ++  M+  GC     NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349

Query: 343 KEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQ 402
           + G+  +A K+L +M+   C  +  TY +++ G  + G  + A+++L+     G   HL 
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG--VHLN 409

Query: 403 TFVF-LVLGLL--KGENKDYVCFVLEEMEKRQLRFDAETWRILVMDAC-GQHVEIG 450
              + ++L  L   GE +  V F L  M +R +     TW  LV+  C   + EIG
Sbjct: 410 KGSYRIILNALCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIG 462

[Close]

BLAST of Lsi06G001520.1 vs. NCBI nr
Match: gi|659099591|ref|XP_008450678.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 872.5 bits (2253), Expect = 3.3e-250
Identity = 416/460 (90.43%), Postives = 438/460 (95.22%), Query Frame = 1


Query: 1   MIQKLIKGSRLLVFHRNVYLIHFQLLSTFSPNKSDYVSHHKQREKLREHIPFVTDVKEVK 60
           MIQKLIK S LL+FHRNV LIHFQLLSTFS NK D  +HHKQR KLRE IPFVTDVKEVK
Sbjct: 1   MIQKLIKRSSLLIFHRNVCLIHFQLLSTFSTNKFDSENHHKQRRKLREPIPFVTDVKEVK 60

Query: 61  DPCEAMALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFV 120
           DPCEA+ALFE+Y E+GFKHHYPSYSSLIYKLARSRRFEAVETILGHL++RNIRC ETLFV
Sbjct: 61  DPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120

Query: 121 ALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEM 180
           ALIQHYGKAHLVEKGIELFH+MPSFNCFRTLQS NVLLNTLVDCDQ SKASEIFQQAYEM
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEM 180

Query: 181 GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTA 240
           GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK VQPSVVTYNSFLGVLCR GEMDTA
Sbjct: 181 GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTA 240

Query: 241 LCLFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTH 300
           LCLF+NMT+KGHHPNA+TYALLMEGWCFIGKYKEAKKLMFDMEF GCKLRPVNYGVLMT+
Sbjct: 241 LCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTY 300

Query: 301 LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPN 360
           LGK GNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEG++GDAYKVL+KMQVGGCDPN
Sbjct: 301 LGKAGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCDPN 360

Query: 361 AATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENK-DYVCFVL 420
           AATYRMMIDG+CNAGDFDGAMK+LNAMLMSGHCPHL+TF FLV+GLLKGEN  DYVCFVL
Sbjct: 361 AATYRMMIDGYCNAGDFDGAMKILNAMLMSGHCPHLKTFAFLVVGLLKGENNDDYVCFVL 420

Query: 421 EEMEKRQLRFDAETWRILVMDACGQHVEIGNHINDLISLH 460
           EEMEKRQLRFDAETWR L+MD CGQHVEIG+H+NDLISLH
Sbjct: 421 EEMEKRQLRFDAETWRTLIMDVCGQHVEIGSHLNDLISLH 460

[Close]

BLAST of Lsi06G001520.1 vs. NCBI nr
Match: gi|778662550|ref|XP_011659903.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 868.2 bits (2242), Expect = 6.3e-249
Identity = 415/459 (90.41%), Postives = 438/459 (95.42%), Query Frame = 1


Query: 1   MIQKLIKGSRLLVFHRNVYLIHFQLLSTFSPNKSDYVSHHKQREKLREHIPFVTDVKEVK 60
           MIQKLIK SRLL+FHRNV LI FQLLSTFSPNK D+ ++HKQR K+RE IPFVTDVKEVK
Sbjct: 1   MIQKLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNHKQRRKIRERIPFVTDVKEVK 60

Query: 61  DPCEAMALFEDYRERGFKHHYPSYSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFV 120
           DPCEA+ALFE+Y E+GFKHHYPSYSSLIYKLARSRRFEAVETILGHL++RNIRC ETLFV
Sbjct: 61  DPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120

Query: 121 ALIQHYGKAHLVEKGIELFHRMPSFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEM 180
           ALIQHYGKAHLVEKGIELFH+MPSFNCFRTLQS NVLLNTLVDCDQ SKASEIFQQAYEM
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEM 180

Query: 181 GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTA 240
            FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK VQPSVVTYNSFLGVLCR GEMDTA
Sbjct: 181 DFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTA 240

Query: 241 LCLFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTH 300
           LCLF+NMT+KGHHPNA+TYALLMEGWCFIGKYKEAKKLMFDMEF GCKLRPVNYGVLMTH
Sbjct: 241 LCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTH 300

Query: 301 LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPN 360
           LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGK+GDAYKVL+KMQVGGCDPN
Sbjct: 301 LGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360

Query: 361 AATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENK-DYVCFVL 420
           AATYRMMIDG+CNAGDFDGAMK+LNAMLMSGH PHL+TF  LV+GLLKGEN  DYVCFVL
Sbjct: 361 AATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVL 420

Query: 421 EEMEKRQLRFDAETWRILVMDACGQHVEIGNHINDLISL 459
           EEMEKRQLRFDAETWRIL+MD CGQHVEIG+H+NDLISL
Sbjct: 421 EEMEKRQLRFDAETWRILIMDVCGQHVEIGSHLNDLISL 459

[Close]

BLAST of Lsi06G001520.1 vs. NCBI nr
Match: gi|645216805|ref|XP_008222804.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Prunus mume])

HSP 1 Score: 570.9 bits (1470), Expect = 2.1e-159
Identity = 276/436 (63.30%), Postives = 339/436 (77.75%), Query Frame = 1


Query: 28  TFSPNKSDYVSH----HKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKHHYPS 87
           TF PNK          H+   KLR  IPFV+ VKEV+DP E ++LF +Y++ GFKH YPS
Sbjct: 32  TFRPNKPKTKPRRERLHRDTTKLRRSIPFVSHVKEVEDPEEGLSLFYEYQQMGFKHDYPS 91

Query: 88  YSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMP 147
           YS+L+YKLARSR FEAVETILGH++ RNI C +TLF+ALIQHYGKA+LVEK IELF++MP
Sbjct: 92  YSALLYKLARSRNFEAVETILGHVRDRNIHCKDTLFIALIQHYGKANLVEKAIELFNQMP 151

Query: 148 SFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWE 207
           SFNC RTLQ+ N LLN LVD  +  +A EIF +  +MGFRPNS+SYNIM+KGW++KG  E
Sbjct: 152 SFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGFRPNSISYNIMMKGWLQKGDGE 211

Query: 208 QACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITYALLM 267
           +AC +FDEMLEK+VQPSVVTYNS +G   R GE++ A  L E+M QKG +PNA+TYALLM
Sbjct: 212 EACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGTYPNAVTYALLM 271

Query: 268 EGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 327
           E +C +GK++EAKK+MFDME+RGCK R +NYGVLM+ LG+ G IDE +SLL EMKKRR K
Sbjct: 272 ECFCMLGKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRFK 331

Query: 328 PDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKV 387
           PDVV YNIL+N+LCKEG+  +AYKVLI+MQVGGC PNAATYR M+DGFC   DF+G +KV
Sbjct: 332 PDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRTMVDGFCQIEDFEGGLKV 391

Query: 388 LNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVMDACG 447
           L AML S HCP L+TF  LV GL+K    D  C VLEEMEKR ++F  E W  LV+DACG
Sbjct: 392 LIAMLTSRHCPRLETFECLVTGLVKCGKIDDACVVLEEMEKRNMQFCFEAWEALVVDACG 451

Query: 448 QHVEIGNHINDLISLH 460
           ++V  G  + +LIS+H
Sbjct: 452 ENVVAGEVVTELISVH 467

[Close]

BLAST of Lsi06G001520.1 vs. NCBI nr
Match: gi|595844137|ref|XP_007208752.1| (hypothetical protein PRUPE_ppa015993mg [Prunus persica])

HSP 1 Score: 569.3 bits (1466), Expect = 6.0e-159
Identity = 276/434 (63.59%), Postives = 337/434 (77.65%), Query Frame = 1


Query: 28  TFSPNKSDYVSH----HKQREKLREHIPFVTDVKEVKDPCEAMALFEDYRERGFKHHYPS 87
           TF PNK          H+   KLR  IPFV+DVKEV+DP E ++LF +Y + GFKH YPS
Sbjct: 32  TFRPNKPKTKPRRERLHRDTTKLRRPIPFVSDVKEVEDPEEGLSLFYEYHQMGFKHDYPS 91

Query: 88  YSSLIYKLARSRRFEAVETILGHLQSRNIRCGETLFVALIQHYGKAHLVEKGIELFHRMP 147
           YS+L+YKLARSR FEAVETILGH++ RNI C +TLF+ALIQHYGKA+LVEK IELF++MP
Sbjct: 92  YSALLYKLARSRNFEAVETILGHVRDRNIHCKDTLFIALIQHYGKANLVEKAIELFNQMP 151

Query: 148 SFNCFRTLQSLNVLLNTLVDCDQLSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWE 207
           SFNC RTLQ+ N LLN LVD  +  +A EIF +  +MG RPNS+SYNIM+KGW++KG  E
Sbjct: 152 SFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGLRPNSISYNIMMKGWLQKGDGE 211

Query: 208 QACNLFDEMLEKRVQPSVVTYNSFLGVLCRNGEMDTALCLFENMTQKGHHPNAITYALLM 267
           +AC +FDEMLEK+VQPSVVTYNS +G   R GE++ A  L E+M QKG +PNA+TYALLM
Sbjct: 212 EACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALLM 271

Query: 268 EGWCFIGKYKEAKKLMFDMEFRGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLK 327
           EG+C +GK++EAKK+MFDME+RGCK R +NYGVLM+ LG+ G IDE +SLL EMKKRR K
Sbjct: 272 EGFCMLGKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRFK 331

Query: 328 PDVVTYNILVNYLCKEGKIGDAYKVLIKMQVGGCDPNAATYRMMIDGFCNAGDFDGAMKV 387
           PDVV YNIL+N+LCKEG+  +AYKVLI+MQVGGC PNAATYRMM+DGFC   DF+G +KV
Sbjct: 332 PDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRMMVDGFCQIEDFEGGLKV 391

Query: 388 LNAMLMSGHCPHLQTFVFLVLGLLKGENKDYVCFVLEEMEKRQLRFDAETWRILVMDACG 447
           L AML S HCP L+TF  LV GL+K    D    VLEEMEKR ++F  E W  LV+DACG
Sbjct: 392 LIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVDACG 451

Query: 448 QHVEIGNHINDLIS 458
           ++V  G  + +LIS
Sbjct: 452 ENVVAGEVVTELIS 465

[Close]

BLAST of Lsi06G001520.1 vs. NCBI nr
Match: gi|659099595|ref|XP_008450680.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 1.1e-157
Identity = 261/286 (91.26%), Postives = 277/286 (96.85%), Query Frame = 1


Query: 175 QQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKRVQPSVVTYNSFLGVLCRN 234
           ++AYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK VQPSVVTYNSFLGVLCR 
Sbjct: 8   RKAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRK 67

Query: 235 GEMDTALCLFENMTQKGHHPNAITYALLMEGWCFIGKYKEAKKLMFDMEFRGCKLRPVNY 294
           GEMDTALCLF+NMT+KGHHPNA+TYALLMEGWCFIGKYKEAKKLMFDMEF GCKLRPVNY
Sbjct: 68  GEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNY 127

Query: 295 GVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKIGDAYKVLIKMQV 354
           GVLMT+LGK GNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEG++GDAYKVL+KMQV
Sbjct: 128 GVLMTYLGKAGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQV 187

Query: 355 GGCDPNAATYRMMIDGFCNAGDFDGAMKVLNAMLMSGHCPHLQTFVFLVLGLLKGENK-D 414
           GGCDPNAATYRMMIDG+CNAGDFDGAMK+LNAMLMSGHCPHL+TF FLV+GLLKGEN  D
Sbjct: 188 GGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHCPHLKTFAFLVVGLLKGENNDD 247

Query: 415 YVCFVLEEMEKRQLRFDAETWRILVMDACGQHVEIGNHINDLISLH 460
           YVCFVLEEMEKRQLRFDAETWR L+MD CGQHVEIG+H+NDLISLH
Sbjct: 248 YVCFVLEEMEKRQLRFDAETWRTLIMDVCGQHVEIGSHLNDLISLH 293

The following BLAST results are available for this feature:

BLAST of Lsi06G001520.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR20_ARATH	1.6e-140	57.92	Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop...	[more]
PP388_ARATH	4.9e-52	31.15	Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop...	[more]
PPR79_ARATH	4.0e-46	30.67	Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th...	[more]
PPR39_ARATH	5.8e-45	28.38	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
PP392_ARATH	2.9e-44	28.85	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN...	[more]

BLAST of Lsi06G001520.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1K9_CUCSA	4.4e-249	90.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570750 PE=4 SV=1	[more]
M5W9F4_PRUPE	4.2e-159	63.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015993mg PE=4 SV=1	[more]
A0A061GWH8_THECC	8.8e-157	60.71	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0419...	[more]
W9SCB5_9ROSA	3.7e-155	61.03	Uncharacterized protein OS=Morus notabilis GN=L484_010855 PE=4 SV=1	[more]
M5WNJ1_PRUPE	6.9e-154	61.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017156mg PE=4 SV=1	[more]

BLAST of Lsi06G001520.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07740.1	9.3e-142	57.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G16420.1	2.8e-53	31.15	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G53330.1	2.3e-47	30.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12775.1	3.3e-46	28.38	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G18475.1	1.6e-45	28.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Lsi06G001520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099591\|ref\|XP_008450678.1\|	3.3e-250	90.43	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-...	[more]
gi\|778662550\|ref\|XP_011659903.1\|	6.3e-249	90.41	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial ...	[more]
gi\|645216805\|ref\|XP_008222804.1\|	2.1e-159	63.30	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial ...	[more]
gi\|595844137\|ref\|XP_007208752.1\|	6.0e-159	63.59	hypothetical protein PRUPE_ppa015993mg [Prunus persica]	[more]
gi\|659099595\|ref\|XP_008450680.1\|	1.1e-157	91.26	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0000166	nucleotide binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G001520	Lsi06G001520	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G001520.1.CDS.1	Lsi06G001520.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G001520.1	Lsi06G001520.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 257..287 score: 0.026coord: 119..147 score: 0.0069coord: 294..321 score: 3.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 184..233 score: 1.6E-16coord: 324..373 score: 4.9
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 119..148 score: 9.3E-4coord: 363..394 score: 2.8E-8coord: 222..256 score: 1.5E-8coord: 327..361 score: 5.3E-8coord: 187..220 score: 7.5E-7coord: 294..326 score: 4.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 185..219 score: 12.693coord: 255..289 score: 9.986coord: 115..149 score: 7.607coord: 290..324 score: 10.315coord: 220..254 score: 12.266coord: 150..184 score: 8.725coord: 80..114 score: 6.993coord: 360..394 score: 12.09coord: 395..429 score: 5.459coord: 325..359 score: 12
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 154..293 score: 5.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 39..442 score: 3.7E
None	No IPR available	PANTHER	PTHR24015:SF734	SUBFAMILY NOT NAMED	coord: 39..442 score: 3.7E
None	No IPR available	unknown	SSF81901	HCP-like	coord: 160..278 score: 1.