Lsi06G001480.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGATGCAATTTTGAGCATAATTTTTCAACGAGTCCTATTGAATTGGCAATTTGTAAATTGGTAGCTCCAAAATTTGGTAAATAGGGGGGAGAGTGGTGGGTTTTATCGTCAAATTAGGGTTTTATCGTCACTCTGTGCCGCTTCTCTTTCTCTGTCTGATCAGCACCTTCGTCCTCTTCATCCAGCCACCCGCAAGCAGGCGCCGCCGCTTCATTGCCGATCATCTCCGCCAGTCGACGTTGCTGGGAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCTCTCACTCTCGGTTTTTCTTCTCCTTATAGCACCACCGTTCACCGCCCTCAGTGGACGCCGCTCGCCGTTGGTCGTGATCGCCACTGCCGCGGATTCGTACAGCGGACGGGTAAGAATAATCCGTTCAGTTTAAATCACATTACCCATAGCTTGTAGAGTTCAAATGTGTAAGTTCGAACCTATTCGAACACAAACCAGCACGAAATTAACCTCTTTCAGCATAAATTAGTGGGTAAGGACTCATTTTATTAATTTCCAAACTCGTTTTAAGTGCTGTTAGTTAAATTTTGGCCTGTGAAATTCTTCCTTTTGCGGTTTCGAGCTAATTCTGGTTGAATCGACACAGAAGCTTATGGCGTTAATATGGCCAAGTAATAGCATTTAAATTGAGTTTCAAAGTAATTTTGGTGTAACTGTTTTAAGCTTGAAACGCCTTTGAGATTTGTTGTTTGTCTTGCATCATATGATTATATTACGAGGCATCAACTGATTAACTCATGGGACCTCATGCATATGTGCATACGCATAGTCGTTATATTTAGAAGTTATGAGTTCGGAGACTGGAAGATTGCTTCACTTCCCCTTTCAGTGAAGCATATGTTTAATAGAGAGGAAAGCCTTTCGAGTGTGTCGTGTCTGACACAGACACTTCATAAAAAATGAAGTGTATGTGCTTCCTAGCCTTTCACAGGAATGGCTTGGCATTGGTTCCCTTTAGAAACTTAACCCTTCATACCAAATGGTGTTGGAGATTTGCTTAGGAGGGTAAGGCTGGTGGTTAGTATTTATGGGGAAGAACCTCTTGGTTGGAAAGCTACTTTACCTAAAGGGAGCTCATATAATAGGCCCTGGTTTGATATTTGCTAGGATAGTCCCTTTGTTTGAATGATTCTCTAGTTTCATAATTGGTAATGGACAATAAGCTTCTGGAATGATGTATGGTTTGGCTGTTCTCCTCTAAAAGATAATTTTCCAGATATGTGGAGCTTTGGTGGCTGAATGTTGGGATAATGACCTAGAGACTTGGAACCTTAATTTTAGAGGAGGCATTTTTAATAGAAAGGTCAAGAACTGATCGAGTTGACCATGAAACTAGAGGGATTTCGTTTAGGGGCATCCGAGGATAACTTATGTTGGTCTCTTGAACCTTCGGGCTGTTTTTTTTTTTTTACCAAATCCCTCTTCTATAAGCTTGTTAGTGTGAGACATACTCTTCAATGTACGGTTGCTAACCAGATTTGGGGTTCCAGAGTTCCCAATTTTTTTCGTAGGCTCCAAAGAAGAAATCCCTCTCTTGTTCTTGGCCCTTTAGTCTGTCTTTTATGTTGGTGCGTGGAGTTCTTAGATCACATTTTCTTGCATTGTCCCTTTGCAAAACGTGGGCTGGCTGTTTTTTATATTAGAGTTTTCCTTCCCAACAAGGTGGATGATTGGCTGTTAGAATGTGTATTAGAAGTTAGGTCATTTCACTCTCACTCTTTTGTCTTCACCTTTTACAGATTTCTCTAACCTCCATTGCTTAATTTAGGTCCAGTATTTCTAAAGAGGGTGATATTCTCAATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATGAAATATAGTTGAAACAAGTTGGTGTAGCTTTTTGTAAAATCTATTAATAGGTATATACAGGGTCAGGTAGTTTGTGATGTAAATTTTCACTCACTAACCAAAAGTTCTTTTTTTTAATAGACCAAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAGAATTTCTGGCAGTTTTATTAACATTTGTGATTGATTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGGTTAGAACTTTTGCTTCGCACTCTGTCCATGTCTAAACTTGGAATTCAATTCAAAATCTGGAATTTGTAAGGTACAATATTTTTTTAATTTATTTAGGACTATAATTTTTTGGTTTTTGTTGTGGTATGAGGATGTTTTAAGTATACTTTTCTTTTTCATTTTATTATTTTCCTACATGCCTTTTCATCGTGTTTGTACATTGCGATCACATGGCTTATTTTTCCACTTGCTGATATTTTTCTCTCTAATTCCAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGGTAATTTTAACTTGTATTCAAATTTTATTACTGGGTGATTGAGATTATGTTGGACTTCTTTATTAAATGCAGTTTTCTTACTTTTCCATTTTTGCTTTCAGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGGTATCAATGGCAAAGTTTTTTCTTTGGCAATTCATTGTTGAAACTATTTTCCATTCTTACTCGTGGATCAGTGAATGTATCAAATATCAGTTTCCTTGTCTTTCTTCTTTAAATACTCTTTTTGCTCAGTCGTTTGTTCCTTCAATCCAAAGCGAACATGGTATTAAATTAATAAAATATTGTTAGCACGACTGTGGTCGAATTATCTTTCACTTTTCTTGATGATAGTAAGTTTTTATGAAAAAAAATAAAAAATATTTGTGAATGCATTTCTTTCATGTAATATACTACGCATAAGAATATGGATTAGTGAATACTTGTGCCTGATTTCACATATGCTGGTGCCTCACCACTATCATTCTTTTTTCATGCTGCCTTTATTTATTTCCTATTTAGGGTGGCAATATTAGTTTGATTTGCTGCATATTACTATGTTGTGAAAAGTATGTAGATCTTAGCTGCATCTCCAAATAATGGCTTTTTCGTTTACAAATCCTATGAAGTCTCGTTTTAATGTGACATAATTTTAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGGTATGCTTTATTTATTTTCTACTTGTTACAGAATTTAATGCTAATCGTGGATGGCATCTAAAAGCACAACCTCCACTTGACACCCAAATAATGCACTGGATGTAGTCTTTCTTTTAAATGTTTGCTCAACGCTTTTTCCAAGAAGTGGCACATGAAATCAGAAAAATATGTTCTACTTTTTGTTAGGCAAAGACATTGGGAAGATTTTTAGGAGTATTGTTAGTATAAATGTCAAATATTTGTTATGATATTGGAAGTATATTAGTCATTAGCTAAGGGTGTTTTAAATGGATGGTTGTTCAGAGAAAGATTAAGATAAGAGCTCGGATGGGTACAAGTAAAGAAACAATCCTCTAACTTCAGATTTAATGACCAAGGTTTCATTCAGAGAAAAAATAAACAATGCTCAGTTTTTAGAGAAAATGACCAAAGCTTCATTCATATAACAAACAATAGGCTTCATTCATATAACAAACAATGGTGGTGAAGTTACTTGACAGGAGATTGCCATTTTATATATGACAAATGCTGGAACCCTCAACTTTTTCGGGGCTGGATAGTAATGAGAGGGTTTACCACTTTATTGAAACATTGTGGGCTGGAGATGATGCATTAAAAAAATTGGAAGAAATGTGATTTGGGTGAATATAAATGCCTTACAATCTCTTCAGCAAAATATGCAAGAACTTTATTCCTTGCTGGATCAATTACATCTTCATTTTTTTTTTCTTTTTTTGGTTTCAAAACAAGAAGTCGGTATCTGAAGTTTGGGTGCAATTTTAAAGCTGTAGCATGAGTAGGAAGTACGGGGGTTCGTTTAACCATCAGCACCCCACCTGAGGGACAATGTGTGCTTTTTGGTGAAGTAAGTTAAAGAATATATGGATAAATGTCAAAAATATCGTCATTAGGATATAAGGGGTACAATTGTCATTAGGTAAGGAATTTGGCATGGTAAAAAATCAATAGGTTGGAGGGGTTTGAGGTTAAGCAGATTTTGGGGAATAGTTTTTGGGGGAGTCCAAGTTTCTCTAGGTAGTTGGGATCTTGTCATTTTTCTTTCTTACGTTCTTGACTTCCATTATTTTTTAGTTCACCGTAGACCATTTTCATATAATTGATCGTTATCCTTTAACTTGCATGTTCACTTTTTGCACCAACTGTTGGTACATTTGTTCTTGTTTGGGGTTTGTGTGGGTGTGATCTATTCTCCCACTGACCATTATTTAATGATATGGTGTTTGTCTTCTTTGTTTGGTGTGATTAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTATTAAAATTCCACTTCCTATTCAGTTTATAAATGAGTTTTCACAATTTTCTTGTTGGACTTCAAAGATTTGTATTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATGATCCAACTTTTTGAACATTTGAGGATTACACTTCTTCGCACTTATCTCTTTTAAACTCGGTTTACAGAATATCTGAGAAACATATGCATTAGTTATCAAGAAGAGAACCACATACAAGATGCATTAGCTATGTTTTCCCGGTTTCTCAAGTTCATATTTTACAAGAGACTAAAAGTATCGAAATTACAGAAAAAATAATGTCGTTGCAAAGGCCAAATATTCATTATCCTTTTCAATTCAAGTTTCAGTAGGATACCTCCTAACAAGAACTCATAAGAACAATAAACAACCCTTAAGGATAGAAATATATATTGCATATATTACTGTAAAAACTACAATATAACATAGCCTTTCGAGAGGGCTACTCTCTGCCAAAATTTCCAAAGGAAATATCAAAAAAAATTTCACACCTTGGTCCTAGCCCACTCCTCTACTTATAACTAAAAGCTCTAACAAACTTACTAACTGTTTACTAATATGTTCCTTTTAATAATCATGCTAATGTTCTACTAATAATTTTGCTATATCTCTAACTAGAGCTGTCATAAATTCTTTGAGATTCCCTTTTGTAACTATTCTCACTTTATTTCAAAAAAAAAAAAAAAAAAAACTATAGTCTCACTTATCTTATGGCCAACCAGAAGTGTCTTTTTGTAATCCATTGGATAGGATTTCATATTTTATAAATTTTGTCAATGTTTCTCCCTTTTCCTAAAAAAAGGAAAGATAAAACCCTCAAATGTGCCCATAGACTTGCTGATGTTCTTCATGTCTCTTCCTAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTATTTCAATTAATTTAATTTTATCTAAGACTTAGAATATAAATTCCTTGCCTCCAGTGAAATGAGATTTTGTTCTATAATAGTAACTGGAGTGCAAATTTTGTCCTTGTTATTTATTTAAACCTTGAGGTATGTTTCTCTATTTTCAATGTATTTCTTAGTTAAATACTTGAGTTCAGATATGATTTTACAAGTTCAAAGAGCATCTCATACTTTTGACTTTATGTTACCCGGAATAGTTCCAAAAGAAAAGAAAAGAAAAGGCGTGTAAGTTGAGAATTTTTTTTTTAAAAAAATTAATTTTAT GATGATGCAATTTTGAGCATAATTTTTCAACGAGTCCTATTGAATTGGCAATTTGTAAATTGGTAGCTCCAAAATTTGGTAAATAGGGGGGAGAGTGGTGGGTTTTATCGTCAAATTAGGGTTTTATCGTCACTCTGTGCCGCTTCTCTTTCTCTGTCTGATCAGCACCTTCGTCCTCTTCATCCAGCCACCCGCAAGCAGGCGCCGCCGCTTCATTGCCGATCATCTCCGCCAGTCGACGTTGCTGGGAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCTCTCACTCTCGGTTTTTCTTCTCCTTATAGCACCACCGTTCACCGCCCTCAGTGGACGCCGCTCGCCGTTGGTCGTGATCGCCACTGCCGCGGATTCGTACAGCGGACGGGTCCAGTATTTCTAAAGAGGGTGATATTCTCAATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTATTTCAATTAATTTAATTTTATCTAAGACTTAGAATATAAATTCCTTGCCTCCAGTGAAATGAGATTTTGTTCTATAATAGTAACTGGAGTGCAAATTTTGTCCTTGTTATTTATTTAAACCTTGAGGTATGTTTCTCTATTTTCAATGTATTTCTTAGTTAAATACTTGAGTTCAGATATGATTTTACAAGTTCAAAGAGCATCTCATACTTTTGACTTTATGTTACCCGGAATAGTTCCAAAAGAAAAGAAAAGAAAAGGCGTGTAAGTTGAGAATTTTTTTTTTAAAAAAATTAATTTTAT ATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAG MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLITCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE
BLAST of Lsi06G001480.1 vs. Swiss-Prot
Match: BRX1_XENLA (Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis GN=brix1 PE=2 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.0e-64 Identity = 141/323 (43.65%), Postives = 195/323 (60.37%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. Swiss-Prot
Match: BRX1_HUMAN (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens GN=BRIX1 PE=1 SV=2) HSP 1 Score: 248.1 bits (632), Expect = 1.4e-64 Identity = 142/323 (43.96%), Postives = 195/323 (60.37%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. Swiss-Prot
Match: BRX1_RAT (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus GN=Brix1 PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 2.3e-64 Identity = 137/298 (45.97%), Postives = 182/298 (61.07%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. Swiss-Prot
Match: BRX1_PONAB (Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii GN=BRIX1 PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 5.2e-64 Identity = 141/323 (43.65%), Postives = 194/323 (60.06%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. Swiss-Prot
Match: BRX1_MOUSE (Ribosome biogenesis protein BRX1 homolog OS=Mus musculus GN=Brix1 PE=1 SV=3) HSP 1 Score: 246.1 bits (627), Expect = 5.2e-64 Identity = 137/300 (45.67%), Postives = 184/300 (61.33%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TrEMBL
Match: A0A0D2SNA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G319600 PE=4 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 2.5e-158 Identity = 271/330 (82.12%), Postives = 298/330 (90.30%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TrEMBL
Match: A0A0D2PI01_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G319600 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 3.6e-157 Identity = 269/326 (82.52%), Postives = 294/326 (90.18%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TrEMBL
Match: A0A0B0NEE6_GOSAR (Ribosome biogenesis BRX1 OS=Gossypium arboreum GN=F383_18642 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 3.6e-157 Identity = 269/326 (82.52%), Postives = 294/326 (90.18%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TrEMBL
Match: A0A061F737_THECC (Ribosome biogenesis protein brix, putative OS=Theobroma cacao GN=TCM_031378 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 1.1e-156 Identity = 271/327 (82.87%), Postives = 291/327 (88.99%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TrEMBL
Match: A0A067JSR7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22878 PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 5.2e-156 Identity = 273/325 (84.00%), Postives = 288/325 (88.62%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TAIR10
Match: AT3G15460.1 (AT3G15460.1 Ribosomal RNA processing Brix domain protein) HSP 1 Score: 531.9 bits (1369), Expect = 2.7e-151 Identity = 255/324 (78.70%), Postives = 281/324 (86.73%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. TAIR10
Match: AT1G52930.1 (AT1G52930.1 Ribosomal RNA processing Brix domain protein) HSP 1 Score: 526.2 bits (1354), Expect = 1.5e-149 Identity = 253/326 (77.61%), Postives = 283/326 (86.81%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. NCBI nr
Match: gi|659099573|ref|XP_008450669.1| (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo]) HSP 1 Score: 622.9 bits (1605), Expect = 3.2e-175 Identity = 301/324 (92.90%), Postives = 310/324 (95.68%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. NCBI nr
Match: gi|778662534|ref|XP_011659901.1| (PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BRX1-like [Cucumis sativus]) HSP 1 Score: 612.5 bits (1578), Expect = 4.4e-172 Identity = 300/324 (92.59%), Postives = 306/324 (94.44%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. NCBI nr
Match: gi|763778551|gb|KJB45674.1| (hypothetical protein B456_007G319600 [Gossypium raimondii]) HSP 1 Score: 566.2 bits (1458), Expect = 3.6e-158 Identity = 271/330 (82.12%), Postives = 298/330 (90.30%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. NCBI nr
Match: gi|823198009|ref|XP_012434459.1| (PREDICTED: ribosome biogenesis protein BRX1 [Gossypium raimondii]) HSP 1 Score: 562.4 bits (1448), Expect = 5.2e-157 Identity = 269/326 (82.52%), Postives = 294/326 (90.18%), Query Frame = 1
BLAST of Lsi06G001480.1 vs. NCBI nr
Match: gi|590608740|ref|XP_007021346.1| (Ribosome biogenesis protein brix, putative [Theobroma cacao]) HSP 1 Score: 560.8 bits (1444), Expect = 1.5e-156 Identity = 271/327 (82.87%), Postives = 291/327 (88.99%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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