Lsi06G000490.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi06G000490.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 376074 .. 379802 (-)
Sequence length618
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTTGTAAAATTAGCACCATCAAGAAGCTATCCTAGCTACTCATGAAGTACTAATTAGTTAGAGTGGTGGTGTTTGTTCTAAATTTGTGATTTATTCATGGAAGTACAAATATGATTTTTGCAAGGTGTTAGTAACTTCCATCAAATTACTAGTTTTCTAGTGAAAAACTTATCCAATACTTTTGAACGAGTAACTAAAAAGTACTTAAAGTAACACTTTGACTCTCAAAACCACCTAAAAAGTGTCAAAGTCACATTTTGACTCTCAAAACCTCCTAAAAACTAAAAAGTGCCTAAGTCCATTTTGACTATCAAAACCACGTAAGAAGTTCCTAAAAAGTCTAAGTCACACTTTATCTCTCAAAACAAACTAAGTGTCATTTTGACTCTCAAAACTATTTCAAAAGTGTCTAAGTATCATTTTGACTCTCAAAACCACCTAAAAAGTTTTATAGCTACCTAAGGTGTGTAACTCACTCTCTGTAACTATGAACATATCCTAAAGATGTCTAAGCACCCTTCAAGACCAAGAAATACTTCAAAACAATCTTAGAGCAGTTAGCGTAACTGCAGGATAGCCACAAAACATGTATACTGCAACAAAGAGCATAACACTGGTGAGTAAAAAAAACTCTCCTAAGAGTCATAGAGCCTTCTAACTTTAAATTTTGTAACCCATACTAATTCTTGGTTGCTTCTCAAACTGGTTACAATAGCCAACAAAAATCACCCACACCCACACCAAGCAATTGAACCTGATTTATGCGTTAAAAGTCACCAGTACAGAGGAAGTCAAGGAAATCATCACAATGCTAAGCAAGTCCCACCAAGAATAAGAGACCTAAACACTAAAAAGCATGGAAACATGCATACAAATCAAAAACTTAGACTTGGTGTAAAACAAATAACTATACCTATGATAATTCACTAAAAAATAAATCTCACGGCCCATTATTGTGAAATTAGTTACCAAAATCAACATGATTCAAATGATAACTTACACTCAATATAAAACATCAAGTGCAAACAAACAAAGGTTTACACATGCAGAGGGAACAAAAGGCCTATATGGGGAATATTTTACTAAATGAGAAAACATGAAGTTCTGAACAACATATTCTATTAAAAACATGGCAGAGAAGGATCCTTACCTCATTTGCTAATATCATTTTCATTTTCTTGTTTCATTCGTGTCGTCAACGACGTTTTTTGAATAGGAAGCATATGATATTCCAAACTTCATACTGTTTCATGAGGTCTTCCTAGTTATCATGTTCTGGATTAAGTCCCTTCTAGATATCCTACTATGTAATCCAAATCTGTCACATCCCCATAATCTTTCATATGCCAAATAAGTAGTTCGAGAACTTTGTGCACCCACTTTATGTGAGGGCCCACCTTATCTCCAACCACAAAACTATAAACTTCATTTCTAATTTCAATCCAACTCTTACCCACTTCCTTCTTGTTGTCCATCCCTTTCATCAGCTTCCTCATTTTGGCGAACTCGCCCCATTTACCTTCAGCTGCATATATATTGGACAACAGTAGATAAGTCCCCGCCATGTTTGGCCTTGTATCCAATACTCTTTGAGCTGCCAAACTCCGTAGATTGGAAAGTTCATAGGCTTTACAAGCTCCAAGGAGAGCACCCCAAACAGACTCATCAGGTTCAAATGGCATGTTCTCAACAAGTTGAAAAGCCTCCTCGACTCTTCCAGCACGGCCAAGCAAGTCCACCACACACCCGTAGATCTCTTGATCTGGGTTTAGATTGTAATCCTCCAGCATAGATCTAAAATATCTTAGTCCCTTGTCCACAAGTCCAGCATGGCTGCAACCACTTAGGACTGCCATGAACACTATCCGATCAGGTTGAATACCGCTTCGAACCATTTCATCGAACAACTTCACGGCCTCTTTCCCATATCCATGTGCTCCATACCCAATCATCATGGTCGTCCAGGACACCAAATCTCTTTCAGGCATATCACAGAAGAGTTTGTGTGAATCATTTATGTTTCCGCACTTCGCATACATGTCGATAAGTGCATTGATCAATGCTACACTCTTGTCAAATCCTCTACGAACAATTCCACCATGAACTTGTTGTCCACAACTTAAGACTGCTAAATTGGCACAAGCAGCTGTAATACTTGTGAGTGTAAAGCAATTCGGTTCATAGCCTTCAGACCCCATTTGGAAAAATAAACTTAAAGACTCACTGGAATCTGACCTTTCATATCCCGCTATCAAGGTGTTCCATGTAATTAAATTCTTTTGGGTCATTTCACCAAAGCATCTTTTTGCATCACACAAATAGTTACACCTGCAATACATGTCGAGTATTGAATTCATTACTGGAACATCACAATGGAGGCCATATTTGGTGACTGCTGCATGTATTTGCTTTCCACATGAATATGACCTGATTGAAGCACAAGCTCTAACCGCAATGGAAAAGCTAAATGAGTTTGGTTCAACATCTTCCTGTTGGCCAAAGCATTCATTATTAAATAAAGATAAACATATTGTGATATTATTAAGGTTAAATTGGAATTTTGGTCCTGAACTTTATGGGTTGTCTCCTATTTAGTTCCTATACTTCAAACGTGTCTAATAGTTTCCTAACCTTTCAACCTTGTGTTTGATAAGTTCTTATCACTAAATTAGTTTAACACGTGTGGCAGGGTGATAGTATTATTTCAAGATTATGTTTGAAATTAACCTACCTATGATCCTTGACTAATATACAGTTAGCGTGTCGTATAAGTGTTAAGGAACTATTAGAAACCTTTTAAAGTGCTAAGATGAAATAGACACAAGCATGAAAGGTTAAGAGCTCATTAGAACTTTTAAAAGCATATAGAATAAATAAACACAACTATAAAAATTTAAAAACCTATTAGCCTAACGTTTAAAAATACAAGGCCTAAACAGACACGGCTTAAAAGCTTAGGGACCATATAAGGCCTAAAACGACACAACCAAACCTGGTATATAAACTAATATTAATAACTCAACAAAATTGTATAATTTATGTATAGTGTGCCAGAGAAATCAAGTATAGGACTTCCTAAATGTAAAATACACTGCTGGAACAACTATAAGATTGTTACCAGTAACATTTGCCTGAAAGCTTGAAGCCCACTGTAGCCATCACCTCGGTGAGTCAACCCTGCAATCAAAGTAGTCCATGACACAGCAGTCTTCAGAGGTATATCATTAAACACAGTCAATGCATCATCCATGGTAGCACAAGAAGTAGCATACATGTCCAAGAGAGCATTCTGGACGTACATCGACCTGTCGATACCATGCTTTGTCGCAAGACTATGAGCCAAAGCCCCACATGAAAGAGCCTTCATGCCTTTGCAAGCCTTGAGAACACTAGACATAGTGAAGGCATTTGGCTGAATTTCACTCCTTAACATCTCACAGAACACGGTCCACGCTTGAGGGTAGTGATTGCAAGAAGTAAAGCCAACAATCATAGCAGTCCAAGTGACCACATCTCTTTCATGCATTTCATCAAACAGGTTACAAGCTTCTTTCGTTAGGCCTTTGTCGAAGTATGATTTGATGAGATTTGTGGCCCAAATAGATGGTCCTTTTGGTGTAAAAGATGGGTTTGATTGAAAGGTGGAGTTGCTCATACATTGAAGAGAGTTTCTTACTATCAATGGAATTGGGTGGAAATGAGTGGACGATGCCAGTTTGTTAA

mRNA sequence

ATGAGCTCCAAGGAGAGCACCCCAAACAGACTCATCAGGTTCAAATGGCATGTTCTCAACAAGTTGAAAAGCCTCCTCGACTCTTCCAGCACGGCCAAGCAAGTCCACCACACACCCGACTGCCATGAACACTATCCGATCAGGTTGAATACCGCTTCGAACCATTTCATCGAACAACTTCACGGCCTCTTTCCCATATCCATGTGCTCCATACCCAATCATCATGGTCGTCCAGGACACCAAATCTCTTTCAGGCATATCACAGAAGAGTTTACCCCATTTGGAAAAATAAACTTAAAGACTCACTGGAATCTGACCTTTCATATCCCGCTATCAAGGTGTTCCATTGTGCCAGAGAAATCAAGTATAGGACTTCCTAAATGTAAAATACACTGCTGGAACAACTATAAGATTGTTACCAAACACGGTCCACGCTTGAGGGTAGTGATTGCAAGAAGTAAAGCCAACAATCATAGCAGTCCAAGTGACCACATCTCTTTCATGCATTTCATCAAACAGATGGGTTTGATTGAAAGGTGGAGTTGCTCATACATTGAAGAGAGTTTCTTACTATCAATGGAATTGGGTGGAAATGAGTGGACGATGCCAGTTTGTTAA

Coding sequence (CDS)

ATGAGCTCCAAGGAGAGCACCCCAAACAGACTCATCAGGTTCAAATGGCATGTTCTCAACAAGTTGAAAAGCCTCCTCGACTCTTCCAGCACGGCCAAGCAAGTCCACCACACACCCGACTGCCATGAACACTATCCGATCAGGTTGAATACCGCTTCGAACCATTTCATCGAACAACTTCACGGCCTCTTTCCCATATCCATGTGCTCCATACCCAATCATCATGGTCGTCCAGGACACCAAATCTCTTTCAGGCATATCACAGAAGAGTTTACCCCATTTGGAAAAATAAACTTAAAGACTCACTGGAATCTGACCTTTCATATCCCGCTATCAAGGTGTTCCATTGTGCCAGAGAAATCAAGTATAGGACTTCCTAAATGTAAAATACACTGCTGGAACAACTATAAGATTGTTACCAAACACGGTCCACGCTTGAGGGTAGTGATTGCAAGAAGTAAAGCCAACAATCATAGCAGTCCAAGTGACCACATCTCTTTCATGCATTTCATCAAACAGATGGGTTTGATTGAAAGGTGGAGTTGCTCATACATTGAAGAGAGTTTCTTACTATCAATGGAATTGGGTGGAAATGAGTGGACGATGCCAGTTTGTTAA

Protein sequence

MSSKESTPNRLIRFKWHVLNKLKSLLDSSSTAKQVHHTPDCHEHYPIRLNTASNHFIEQLHGLFPISMCSIPNHHGRPGHQISFRHITEEFTPFGKINLKTHWNLTFHIPLSRCSIVPEKSSIGLPKCKIHCWNNYKIVTKHGPRLRVVIARSKANNHSSPSDHISFMHFIKQMGLIERWSCSYIEESFLLSMELGGNEWTMPVC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi06G000490Lsi06G000490gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi06G000490.1Lsi06G000490.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi06G000490.1.CDS.7Lsi06G000490.1.CDS.7CDS
Lsi06G000490.1.CDS.6Lsi06G000490.1.CDS.6CDS
Lsi06G000490.1.CDS.5Lsi06G000490.1.CDS.5CDS
Lsi06G000490.1.CDS.4Lsi06G000490.1.CDS.4CDS
Lsi06G000490.1.CDS.3Lsi06G000490.1.CDS.3CDS
Lsi06G000490.1.CDS.2Lsi06G000490.1.CDS.2CDS
Lsi06G000490.1.CDS.1Lsi06G000490.1.CDS.1CDS