Lsi05G008740.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008740.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	chr05 : 14815838 .. 14820609 (-)
Sequence length	951

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAAGTGACAAACTTTGCTAGGCAATATGCTAATGAACGTAGTAATTATTGCCAATTGTTGCATTCTAGCAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAGTAATGGCGGTACATTCATTACCTGCAACTATTACCCACCAGGGAATGTTGTTGGCGAGCGACCATATTAAAGGATCCTTCTCCTTCAATAATTAAAACAATAAATTCTAAAGACTATGACTTTGATATTATGTTTATGAGAGCATGTTCACTATTAATAAATAAAAATAATGCAGGATTGTTCCACTAATTGTGCTTTATCAAAGATTGTTATACATCCTATTGTTATCAATAAAATACTCAATAGTCTCAAATGTTTGTCATTCTTTTTTAACTTCAATCATAATATTTCAAAATTTCAATTTCAATATTATGTATGTATTGAATCATTCACATTTAAATTCTTATCATTTTTAAGAATTGGAAGAGATGAATTATGTGAGTCTAAGAGATCTATTTTTCTATGATGTTATTAGTATGATTGAATCTTTAATTGAGTCAATACCCATAACTAAGATATCAAATGAAGTTACACATGGATCGTGCCATATAAGAATGAGATTGTAGTTTTAGATTTTACAGACAAACTATGACTACATTAATGTAATTAAAACAATGTGTCGTATTTTCACTCAGTAATAAAATGTTGTTTGATATCAAAGCAATAATATTGTCAATTAAATTTAATGTTTTTCAGTAGTTTGGATTTTGATTGGGAACAATATAGAGCAGCATATGACAATAAACTTTTTTATGAAACTAATATAGAGAAATTAAAAAATAAAAGTTCTTTTAGATATGCTAAATAATATATTTAGTCTTATTGGAATATAAAATGGCAACAAAAGCTTTATACGTTTTTCAATATAATATAATCTAATATAATGTCTCACATTTTACTGTATTGTTCAAATTATTTAGAACAGTTGAAAATGCATGTAACTTCCCAAATTTCAGGTGAATTTAATTTTTTTATTATGTAAATTATTGGGTGTTGGTCCTTTTAATTTTAGTATTTAAATTCATTTTTGGTGTAAGTTGAAGGGAGTTAATATTTTTTGGGCTCATTGGACCTCTCGCCATGTTAGTTGTGGGGTGATTTTGGTCTAAGGTGGCTAAAACGGTGAACTTTGACTTGGTCAAAGTCTAAGTCAACTAGGGTTTAAAAAAAGAAAAAAGAAAAATCTAGCTTATAGGTCGTCGCCTGACCCCTGCATCCTCTTTTTCATTCGTGTGCAACCGTCCGAAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTGAGTGTGTCACCACCTACATCTCTCTTTATCTCCTTTTGTTTATCTTTCTCCGTCTCTTTTTTTAATATCTAGACAATGTCATGTATGCCTATTATTTAAGAAATAGTTGTCTAACATTAATGAAAGAAAAAATAGATAAAATAGCTAACAAAATAATAGTAATAAATACAACACTTTGAATTTTTTTGTTAGCTATAGCAAATATAATGTCTTAATAAATCATAAGTATGTATAGCCCCGTCACCTTATTATCATAGCCTATTAATTATACTTTTAGTTTTTAAAATCAACGATAAATTTACTATAAAAACTTATGATAAACTTTGGCAACCAATAAAATAGGCTAATATGAGTGTCCCTTTAGATTTTTCTCATATCGATTAATTGTAGATTTTTGAATTTTGAAAAATATATTTTTATTTAAATCTTAAAAGGCAAGGTTTTGAATTCAAAGGCTTTTTTTTTTTTTTTAGGATCCTGAATAGAACAAGATTCCTCCAAGATCCTCAAGGTTGAGGGTACATCAACAGGTTGCCTTGTTGAAGAGTGGGATAGAGTGGTGGTATAGAAGGGTAGGATGACGGAAAGAGTTACGGCTGAGATGGAGCTTCTGAATTTATCGGGGGAAGAGGAAAATACGTCAATTCCTCTAGATCCTTGGATTGCTCAGGAGATTAATGGTCATCTGGACCATTGTCTTATTGGAAAACTTCTTTCACCAAGAATTATCTTTAGAAACGCTTTCTTCAATGCGTGGAAGATGAATCATGGAATTAATATCTCGGTGATTGGGAGGAATATCTTTCTGTTTGTCTTTGAGAAACTTCTTGACAAGGAATGGGTTTTGAGCGCTAGTCCGTGGTTATTTGATAAACACCTTTTGATTTTAGAAGAACCGGGGATCGATAGGCAGCTATCCGATCTAAATTTTAACAAGGTTTCTTTCTGGATTCGGTTGCTGAATTTGCCTTTCGGGTACCAGAACAGAATGATGGCGAGGAAAATTGGTGAAGCAATTGGGGGTTTTATTGATGTTGATTGTGATCAGGAAGGTTTATGTTGGGGGGATTCGATGAGAATCAAGGTCCTTTTAGACATCTCGAAACCTTTACGTAGGGGTATTAAAGTGTTATCTTCAGATGGAACAGAGGAGAAATGGGTGGCGATTCGGTACGAAAGATTGCCGGATTTTTGCTATTCGTGTGGTCGCCTAGGTCATGTTACCAAGGATTGTAATTTTAATCCTCTAGACCCAGATACGGTTAGTGGCAGTTCTGGACAATTTGGCCCGTGGTTAAGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGGTTATGTTAAGCCTGGGGAGTGCAAACAACCAAGGGCAGTTTCATTAGAGACACTACTGATTGACGGGAATATTACGTTGGCAGAGGCTGCAAGTCAGCCCTGCCCTGAATTATGAAGATCGTTTGTTGGAATGCTCGGGGTTTGGGCAACTTCCGAGCATTCCGTTCTTTGTGTCATCTTGTCCGTACGTCTAATCCTAACATTTTGTTCGTTTCTGAAACTAAGGGAGGCCTGGAGCTTTGTAATAAAGTTAAGTTTCGTTGTAGATTTTCTGGTTGCTTACCAGTTAATAGTGTGGGTGCAAAAGGTGGTTTGTGTATATTCTGGAACAACTCAGTGGTCCTTGATATTAAATCGTACTCTCCTCACCATCTTGATACGTTGATTTCATGGAATAACAACCAATTGAGATTTTCTGGTGTGTATGGGTATCCTGAGATAGCTAGGAAGCATCTGACTTGGGAGTTGCTGAGCAGATTGAATCCTGGAAAGGATGTTCCGTGGTTGATAGGGGGGATCTTAATGAAATTCTCTATGATAGTGAAAAGTCTGGGGGTCATCCTCGTGCTGTTCAGGTCCTTGGCGCTTTCAAAGAAGCTCTGGATAATTGTTTACTGGTAGATTTAGGTTACAAAGGTTCCCATTTTACATGGTATGGTAAGAGAAATGGGAATATGATTTGGGAGAGATTGGATAGGTTTCTTGGTAATGAGGCGTTTTGGAATTTATTTAATTAGGCTCATGTTAGTCATCTTGGGTGGCTTTTTTCAGATCATCGTCCTATTATGATATCCCTAGAGTATAATAAGTTCAGGAAAAATAGGGGGACGAAATCCTTTAAATTTGAAGAAGTTTGGATGCTAGATGCTGACTGTAAGAATGTTATCTCTGAAGGAGGTTACTGGAATAACCCTTGTTCAGAGGTCCCTGTTGATGAAAGCCTTAGGAGTTGCTCTAGAGCCCTTTCCCGCTAGGGGAAAGGAAATGTTAATGAGTGTAAGGTTAAAATTGCGAATTGTAAGAGAGTTCTTCAGGCAGCTTATGATAGCCCTTCGGTTACTAATTTCGATCATATCCATGAGATTGAATTTGAGCTTGCAGGCTTCTGGAAAAAGAGGAAATATATTAGAAGCAGAGGTCTAGGGAAGATTGGCTTAGATGGGGGGATAAAAACAGTAAATGGTTTCATAAGAAGACTACTCTAAGAAGGAAAAAGAATGAGATATCTGGCATTCTTAATGAGCTCAATGTATGGACAGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

mRNA sequence

ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAACAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

Coding sequence (CDS)

ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAACAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

Protein sequence

MSMHTMMFVLVPMVKITLSKLPLNPSNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKVSPFDASSSVANNQPTTSPLRHRTIIAVNWWFQGAPRSPKKSPKPSKDPETSRTAEEEAETQPSNPEIRTGRNGSQEEPKNQGPFNLDLNKVQDLVDNLESDLGRTQFAPVSTQPLPHFASESMSSVGPFDLTPGTSCKNVLNLDIPDGGRSSVETKLRKTTRTWKKRATSATYSPLGASRPYLPKRKKVDDEDDKEIHNTFLNYFQDLFTSSEAYDSQI

Homology

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BLAST of Lsi05G008740.1 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.7e-16
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + M+  +AVEMWV+E+Q+Y++D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]

BLAST of Lsi05G008740.1 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + ++  +AVEMWVNE+Q+Y +D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]

BLAST of Lsi05G008740.1 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 1


Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGENL     ++SG+ AV +WVNE+  YNYDTNTC    +CGHYTQVVW NS ++GCAKV
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKV 138

Query: 98  ----------SPFDASSSVANNQP 112
                       +D   + AN +P
Sbjct: 139 RCNNGGTIISCNYDPPGNYANQKP 160

[Close]

BLAST of Lsi05G008740.1 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + M+  +AVEMWV+E+Q+Y++D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]

BLAST of Lsi05G008740.1 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1


Query: 38  YGENLTMHPA-EMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAK 97
           YGENL      E++G  AV+MWV E+  YN +TNTCA  ++CGHYTQVVW NS ++GCA+
Sbjct: 82  YGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCAR 141

[Close]

BLAST of Lsi05G008740.1 vs. TrEMBL
Match: F2YMM9_CUCPE (Pathogenesis-related protein 1 (Fragment) OS=Cucurbita pepo GN=PR1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 1


Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MH +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 44  SNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 103

Query: 86  WNNSTKVGCAK 97
           W N+TKVGCAK
Sbjct: 104 WQNTTKVGCAK 114

[Close]

BLAST of Lsi05G008740.1 vs. TrEMBL
Match: M5VJ82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.2e-17
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
           N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD +MCGHYTQVVW N+
Sbjct: 69  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGKMCGHYTQVVWRNT 128

Query: 90  TKVGCAKV 98
            +VGCAKV
Sbjct: 129 ARVGCAKV 136

[Close]

BLAST of Lsi05G008740.1 vs. TrEMBL
Match: M5VXX6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013370mg PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30 NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
          N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD ++CGHYTQVVW N+
Sbjct: 5  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADDKVCGHYTQVVWRNT 64

Query: 90 TKVGCAKV 98
           +VGCAKV
Sbjct: 65 ARVGCAKV 72

[Close]

BLAST of Lsi05G008740.1 vs. TrEMBL
Match: S4VAE5_PRUPE (Pathogenesis-related protein 1 (Fragment) OS=Prunus persica GN=PR1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
           N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD ++CGHYTQVVW N+
Sbjct: 46  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADDKVCGHYTQVVWRNT 105

Query: 90  TKVGCAKV 98
            +VGCAKV
Sbjct: 106 ARVGCAKV 113

[Close]

BLAST of Lsi05G008740.1 vs. TrEMBL
Match: A0A078IA81_BRANA (BnaA03g52700D protein OS=Brassica napus GN=BnaA03g52700D PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.7e-16
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGEN+     +MSG+EAV MWVNEQ  YNY +NTCA  + CGHYTQ+VW NS  +GCAKV
Sbjct: 79  YGENIAWSSGDMSGVEAVNMWVNEQADYNYGSNTCASGKQCGHYTQIVWKNSVSLGCAKV 138

Query: 98  S 99
           S
Sbjct: 139 S 139

[Close]

BLAST of Lsi05G008740.1 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 1


Query: 37  TYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAK 96
           +YGEN+      M+G+ AV+MWV+EQ  Y+YD+NTCA  + CGHYTQVVW NS ++GCAK
Sbjct: 78  SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAK 137

Query: 97  V 98
           V
Sbjct: 138 V 138

[Close]

BLAST of Lsi05G008740.1 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 85.1 bits (209), Expect = 8.4e-17
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 1


Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGENL     ++SG+ AV +WVNE+  YNYDTNTC    +CGHYTQVVW NS ++GCAKV
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKV 138

Query: 98  ----------SPFDASSSVANNQP 112
                       +D   + AN +P
Sbjct: 139 RCNNGGTIISCNYDPPGNYANQKP 160

[Close]

BLAST of Lsi05G008740.1 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16
Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 1


Query: 32  MRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQE--MCGHYTQVVWNNS 91
           + +N  +GEN+ M   EMS  +A EMW+NE+Q+Y+YD+NTC D     C HYTQVVW N+
Sbjct: 69  VHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNT 128

Query: 92  TKVGCAKV 98
            ++GCAKV
Sbjct: 129 VRLGCAKV 136

[Close]

BLAST of Lsi05G008740.1 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 34  NNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVG 93
           +N  YGENL      +SG EAV++WVNE+  Y Y +NTC+D + CGHYTQVVW  S  VG
Sbjct: 78  SNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVG 137

Query: 94  CAKVSPFDASSSVANN 110
           CAKV   +  + V  N
Sbjct: 138 CAKVKCDNGGTFVTCN 153

[Close]

BLAST of Lsi05G008740.1 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 5.4e-16
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 1


Query: 37  TYGENLTM-HPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCA 96
           +YGENL   + A  +G+ AV +WVNE+ +YNY  N C   + C HYTQVVW+NS K+GCA
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKIGCA 135

Query: 97  KVSPFDASSSVANNQPTTSPLRHRTIIA 124
           +V   +    V  N   ++ L+ R I A
Sbjct: 136 RVLCNNGGYFVGCNYDASAALKSRKITA 163

[Close]

BLAST of Lsi05G008740.1 vs. NCBI nr
Match: gi|326910911|gb|AEA11234.1| (pathogenesis-related protein 1 [Cucurbita pepo])

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 1


Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MH +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 44  SNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 103

Query: 86  WNNSTKVGCAK 97
           W N+TKVGCAK
Sbjct: 104 WQNTTKVGCAK 114

[Close]

BLAST of Lsi05G008740.1 vs. NCBI nr
Match: gi|595792413|ref|XP_007199955.1| (hypothetical protein PRUPE_ppa1027191mg [Prunus persica])

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-16
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
           N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD +MCGHYTQVVW N+
Sbjct: 69  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGKMCGHYTQVVWRNT 128

Query: 90  TKVGCAKV 98
            +VGCAKV
Sbjct: 129 ARVGCAKV 136

[Close]

BLAST of Lsi05G008740.1 vs. NCBI nr
Match: gi|514857007|gb|AGO62049.1| (pathogenesis-related protein 1, partial [Prunus persica])

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30  NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
           N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD ++CGHYTQVVW N+
Sbjct: 46  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADDKVCGHYTQVVWRNT 105

Query: 90  TKVGCAKV 98
            +VGCAKV
Sbjct: 106 ARVGCAKV 113

[Close]

BLAST of Lsi05G008740.1 vs. NCBI nr
Match: gi|595793751|ref|XP_007200624.1| (hypothetical protein PRUPE_ppa013370mg [Prunus persica])

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 30 NGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNS 89
          N + +   YGENL M  A++SG +AV MWV E+  YNYD+NTCAD ++CGHYTQVVW N+
Sbjct: 5  NLVHSGGPYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADDKVCGHYTQVVWRNT 64

Query: 90 TKVGCAKV 98
           +VGCAKV
Sbjct: 65 ARVGCAKV 72

[Close]

BLAST of Lsi05G008740.1 vs. NCBI nr
Match: gi|674886478|emb|CDY46098.1| (BnaA03g52700D [Brassica napus])

HSP 1 Score: 93.6 bits (231), Expect = 6.7e-16
Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 1


Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGEN+     +MSG+EAV MWVNEQ  YNY +NTCA  + CGHYTQ+VW NS  +GCAKV
Sbjct: 79  YGENIAWSSGDMSGVEAVNMWVNEQADYNYGSNTCASGKQCGHYTQIVWKNSVSLGCAKV 138

Query: 98  S 99
           S
Sbjct: 139 S 139

The following BLAST results are available for this feature:

BLAST of Lsi05G008740.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1B_TOBAC	8.7e-16	53.62	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1C_TOBAC	1.5e-15	53.62	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PRB1_ARATH	1.5e-15	48.81	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1A_TOBAC	1.5e-15	53.62	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1_SAMNI	1.1e-13	57.38	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of Lsi05G008740.1 vs. TrEMBL


Match Name	E-value	Identity	Description
F2YMM9_CUCPE	1.4e-20	66.20	Pathogenesis-related protein 1 (Fragment) OS=Cucurbita pepo GN=PR1 PE=2 SV=1	[more]
M5VJ82_PRUPE	7.2e-17	61.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1	[more]
M5VXX6_PRUPE	1.2e-16	60.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013370mg PE=3 SV=1	[more]
S4VAE5_PRUPE	1.2e-16	60.29	Pathogenesis-related protein 1 (Fragment) OS=Prunus persica GN=PR1 PE=2 SV=1	[more]
A0A078IA81_BRANA	4.7e-16	63.93	BnaA03g52700D protein OS=Brassica napus GN=BnaA03g52700D PE=3 SV=1	[more]

BLAST of Lsi05G008740.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	1.7e-17	59.02	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	8.4e-17	48.81	basic pathogenesis-related protein 1	[more]
AT3G19690.1	1.4e-16	52.94	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT5G26130.1	4.2e-16	51.32	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50050.1	5.4e-16	44.32	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of Lsi05G008740.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|326910911\|gb\|AEA11234.1\|	2.0e-20	66.20	pathogenesis-related protein 1 [Cucurbita pepo]	[more]
gi\|595792413\|ref\|XP_007199955.1\|	1.0e-16	61.76	hypothetical protein PRUPE_ppa1027191mg [Prunus persica]	[more]
gi\|514857007\|gb\|AGO62049.1\|	1.8e-16	60.29	pathogenesis-related protein 1, partial [Prunus persica]	[more]
gi\|595793751\|ref\|XP_007200624.1\|	1.8e-16	60.29	hypothetical protein PRUPE_ppa013370mg [Prunus persica]	[more]
gi\|674886478\|emb\|CDY46098.1\|	6.7e-16	63.93	BnaA03g52700D [Brassica napus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G008740	Lsi05G008740	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G008740.1.CDS.5	Lsi05G008740.1.CDS.5	CDS
Lsi05G008740.1.CDS.4	Lsi05G008740.1.CDS.4	CDS
Lsi05G008740.1.CDS.3	Lsi05G008740.1.CDS.3	CDS
Lsi05G008740.1.CDS.2	Lsi05G008740.1.CDS.2	CDS
Lsi05G008740.1.CDS.1	Lsi05G008740.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G008740.1	Lsi05G008740.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 78..94 score: 6.0E-7coord: 54..67 score: 6.
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 22..97 score: 8.6
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 32..98 score: 2.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 38..97 score: 2.8
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 10..134 score: 1.
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 20..99 score: 3.66
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 79..89 scor