Lsi05G001780.1 (mRNA) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G001780.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing family protein
Locationchr05 : 2552557 .. 2554587 (-)
Sequence length2031
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAATGGCATTCGGTTATCGATCTCCATCCCAAACCCTAACCACATTCTCTTTCGAACCCTCCATTCTTACTCTGGTTCCTTTCACATTGACATTGCCCCTCCACCATCTTTCCCATCATTCAAATGCTCAATCTCTTGCCTTGCCACTCTCCGCAACCTCCTGCAGCCGCTTTCTGCGCCGGACTTACCTCCAATTCGATCATATGCGCCCGTTTTCCAGTTCCTTACTGGCCAAAACCTGTTGAAATTGGGCCACCAAGTTCACGCCCACATGCTTATTCGTGGCCTTCAGCCCACCGCGCTGGTTGGCTCCAAGATGGTTGCTTTTTATGCCAGTTCCGGCGATATTGATTCCTCTGTTTCGGTCTTCAATCGGATTAGTGAGCCTTCTTCTCTCTTGTTTAATTCCATGATTCGAGCCTATGCGCGATATGGGTTTGCAGAGAGAATTGTTGCCACTTATTTTAATATGCATTCCTGGGGCTTTACAGGGGGCTACTTTACTTTCCCTTTTGTTCTTAAGTCTTGTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGATTTTGAGAGTTGGGTTGCAGTTTGATTTCTATGTGGCTACTTCTTTGATTGATATGTATGGGAAATGTGGTGAAATAAATGATGCGGCCAAGGTGTTTGATAATATGCCTGTTAGAGATGTTACGGCTTGGAATGCTTTACTTGCTGGTTATATGAAGAGCGGGTGTATTGATGCCGCAGTGGCGATTTTTGAGAGAATGCCATGTAGGAATATTGTCTCTTGGACAACTATGATTTCTGGATACTCACAGAGCGGCTTGGCGCAGCAGGCATTGAGTTTGTTTGATGAAATGATCAAAGAAGATTCAGGAGTAAGACCCAACTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCACTTGAACGCGGAAGGCAGATTCATGAGTTGGCTTGTCGGATGGGTTTGATTTCAAATGCTTCTGTGCTGATTGCCCTTACTGCAATGTATGCAAAATGTGGAAGCTTAGCCGATGCTCGCTACTGTTTTGACAGACTTAGTAGGAGTGAAAAAATTTTGGTTGCTTGGAATACCATGATAACCGCTTATGCTTCCTATGGACATGGGCTTGAAGCAGTATCAACCTTTAGGGAGATGATCCAAGCAGGCATTCAGCCGGATGACATTACATTCACAGGATTGTTATCTGGTTGCAGCCATTCAGGTCTTGTTGATATTGGTTTAAAGTACTTCAACTACATGAGCTCCACATATTCGATCAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGAGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGACGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCACTATTAGCTGCCTGTCGAAAACACCGTAATCTGGAAATGGCAGAAATTGCAGCAAGAAAGCTTTTTGTCCTAGAACCAGAAAACACTGGCAACTACGTCCTGCTTTCGAACATGTATGCTGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCAATTCTGAAATCTCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGATCAATGGCAAAGCACATATGTTTCTCGGTGGCGATAGGTCTCACCCTCAAGCTAAGGAAATCTACATTTTCTTGGAGGCATTGCCAGAGAAGATGAAGGCAGCTGGCTATGTTCCTGATACAAGCTATGTGTTACACGACATCAGCGAGGAAGAGAAAGAATTCAACCTCATTGCACACAGTGAGAAGCTCGCCGTTGCATTCGGGATTCTTAACACTTCTGCCGAAACCGTTCTTCGGGTGACGAAGAACTTGAGAATCTGTGGAGACTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAATAGTTGTTAGAGATGTGAATCGGTTTCATCACTTTAAAGGGGGTTCTTGCTCTTGTGGAGATTACTGGTGA

mRNA sequence

ATGCACAATGGCATTCGGTTATCGATCTCCATCCCAAACCCTAACCACATTCTCTTTCGAACCCTCCATTCTTACTCTGGTTCCTTTCACATTGACATTGCCCCTCCACCATCTTTCCCATCATTCAAATGCTCAATCTCTTGCCTTGCCACTCTCCGCAACCTCCTGCAGCCGCTTTCTGCGCCGGACTTACCTCCAATTCGATCATATGCGCCCGTTTTCCAGTTCCTTACTGGCCAAAACCTGTTGAAATTGGGCCACCAAGTTCACGCCCACATGCTTATTCGTGGCCTTCAGCCCACCGCGCTGGTTGGCTCCAAGATGGTTGCTTTTTATGCCAGTTCCGGCGATATTGATTCCTCTGTTTCGGTCTTCAATCGGATTAGTGAGCCTTCTTCTCTCTTGTTTAATTCCATGATTCGAGCCTATGCGCGATATGGGTTTGCAGAGAGAATTGTTGCCACTTATTTTAATATGCATTCCTGGGGCTTTACAGGGGGCTACTTTACTTTCCCTTTTGTTCTTAAGTCTTGTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGATTTTGAGAGTTGGGTTGCAGTTTGATTTCTATGTGGCTACTTCTTTGATTGATATGTATGGGAAATGTGGTGAAATAAATGATGCGGCCAAGGTGTTTGATAATATGCCTGTTAGAGATGTTACGGCTTGGAATGCTTTACTTGCTGGTTATATGAAGAGCGGGTGTATTGATGCCGCAGTGGCGATTTTTGAGAGAATGCCATGTAGGAATATTGTCTCTTGGACAACTATGATTTCTGGATACTCACAGAGCGGCTTGGCGCAGCAGGCATTGAGTTTGTTTGATGAAATGATCAAAGAAGATTCAGGAGTAAGACCCAACTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCACTTGAACGCGGAAGGCAGATTCATGAGTTGGCTTGTCGGATGGGTTTGATTTCAAATGCTTCTGTGCTGATTGCCCTTACTGCAATGTATGCAAAATGTGGAAGCTTAGCCGATGCTCGCTACTGTTTTGACAGACTTAGTAGGAGTGAAAAAATTTTGGTTGCTTGGAATACCATGATAACCGCTTATGCTTCCTATGGACATGGGCTTGAAGCAGTATCAACCTTTAGGGAGATGATCCAAGCAGGCATTCAGCCGGATGACATTACATTCACAGGATTGTTATCTGGTTGCAGCCATTCAGGTCTTGTTGATATTGGTTTAAAGTACTTCAACTACATGAGCTCCACATATTCGATCAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGAGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGACGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCACTATTAGCTGCCTGTCGAAAACACCGTAATCTGGAAATGGCAGAAATTGCAGCAAGAAAGCTTTTTGTCCTAGAACCAGAAAACACTGGCAACTACGTCCTGCTTTCGAACATGTATGCTGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCAATTCTGAAATCTCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGATCAATGGCAAAGCACATATGTTTCTCGGTGGCGATAGGTCTCACCCTCAAGCTAAGGAAATCTACATTTTCTTGGAGGCATTGCCAGAGAAGATGAAGGCAGCTGGCTATGTTCCTGATACAAGCTATGTGTTACACGACATCAGCGAGGAAGAGAAAGAATTCAACCTCATTGCACACAGTGAGAAGCTCGCCGTTGCATTCGGGATTCTTAACACTTCTGCCGAAACCGTTCTTCGGGTGACGAAGAACTTGAGAATCTGTGGAGACTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAATAGTTGTTAGAGATGTGAATCGGTTTCATCACTTTAAAGGGGGTTCTTGCTCTTGTGGAGATTACTGGTGA

Coding sequence (CDS)

ATGCACAATGGCATTCGGTTATCGATCTCCATCCCAAACCCTAACCACATTCTCTTTCGAACCCTCCATTCTTACTCTGGTTCCTTTCACATTGACATTGCCCCTCCACCATCTTTCCCATCATTCAAATGCTCAATCTCTTGCCTTGCCACTCTCCGCAACCTCCTGCAGCCGCTTTCTGCGCCGGACTTACCTCCAATTCGATCATATGCGCCCGTTTTCCAGTTCCTTACTGGCCAAAACCTGTTGAAATTGGGCCACCAAGTTCACGCCCACATGCTTATTCGTGGCCTTCAGCCCACCGCGCTGGTTGGCTCCAAGATGGTTGCTTTTTATGCCAGTTCCGGCGATATTGATTCCTCTGTTTCGGTCTTCAATCGGATTAGTGAGCCTTCTTCTCTCTTGTTTAATTCCATGATTCGAGCCTATGCGCGATATGGGTTTGCAGAGAGAATTGTTGCCACTTATTTTAATATGCATTCCTGGGGCTTTACAGGGGGCTACTTTACTTTCCCTTTTGTTCTTAAGTCTTGTGTGGATTTGTTGAGTGTTTGGATGGGGAAATGTGTTCATGGACTGATTTTGAGAGTTGGGTTGCAGTTTGATTTCTATGTGGCTACTTCTTTGATTGATATGTATGGGAAATGTGGTGAAATAAATGATGCGGCCAAGGTGTTTGATAATATGCCTGTTAGAGATGTTACGGCTTGGAATGCTTTACTTGCTGGTTATATGAAGAGCGGGTGTATTGATGCCGCAGTGGCGATTTTTGAGAGAATGCCATGTAGGAATATTGTCTCTTGGACAACTATGATTTCTGGATACTCACAGAGCGGCTTGGCGCAGCAGGCATTGAGTTTGTTTGATGAAATGATCAAAGAAGATTCAGGAGTAAGACCCAACTGGGTGACTATAATGAGTGTCCTCCCAGCTTGTGCACAATCATCGGCACTTGAACGCGGAAGGCAGATTCATGAGTTGGCTTGTCGGATGGGTTTGATTTCAAATGCTTCTGTGCTGATTGCCCTTACTGCAATGTATGCAAAATGTGGAAGCTTAGCCGATGCTCGCTACTGTTTTGACAGACTTAGTAGGAGTGAAAAAATTTTGGTTGCTTGGAATACCATGATAACCGCTTATGCTTCCTATGGACATGGGCTTGAAGCAGTATCAACCTTTAGGGAGATGATCCAAGCAGGCATTCAGCCGGATGACATTACATTCACAGGATTGTTATCTGGTTGCAGCCATTCAGGTCTTGTTGATATTGGTTTAAAGTACTTCAACTACATGAGCTCCACATATTCGATCAATCCCAGAGCTGAGCATTATGCTTGTGTTGTCGATCTCTTAGGTCGAGCAGGGAGATTAGCTGAAGCAAGTAAACTTGTAGACGAAATGCCAATGCCAGCAGGACCGAGCATTTGGGGTTCACTATTAGCTGCCTGTCGAAAACACCGTAATCTGGAAATGGCAGAAATTGCAGCAAGAAAGCTTTTTGTCCTAGAACCAGAAAACACTGGCAACTACGTCCTGCTTTCGAACATGTATGCTGAAGCTGGAAGGTGGCAGGAAGTTGACAAACTGAGAGCAATTCTGAAATCTCAGGGGACAAAGAAAAGTCCAGGTTGCAGTTGGATCGAGATCAATGGCAAAGCACATATGTTTCTCGGTGGCGATAGGTCTCACCCTCAAGCTAAGGAAATCTACATTTTCTTGGAGGCATTGCCAGAGAAGATGAAGGCAGCTGGCTATGTTCCTGATACAAGCTATGTGTTACACGACATCAGCGAGGAAGAGAAAGAATTCAACCTCATTGCACACAGTGAGAAGCTCGCCGTTGCATTCGGGATTCTTAACACTTCTGCCGAAACCGTTCTTCGGGTGACGAAGAACTTGAGAATCTGTGGAGACTGCCACACTGCAATGGTGTTCATATCAGAGATATATGGGCGGGAAATAGTTGTTAGAGATGTGAATCGGTTTCATCACTTTAAAGGGGGTTCTTGCTCTTGTGGAGATTACTGGTGA

Protein sequence

MHNGIRLSISIPNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCLATLRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW
Homology
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BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 493.8 bits (1270), Expect = 3.0e-138
Identity = 270/717 (37.66%), Postives = 393/717 (54.81%), Query Frame = 1 

Query: 13  NPNHILFRTLHSYSG-------SFHIDIAPPPSFPSFKCSISCLATLRNLLQPLSAPD-- 72
           N  +I  + + SYS           +   P P+  SF   I  L   +   Q +      
Sbjct: 48  NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRM 107

Query: 73  -----LPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKM---------- 132
                +P       +F+     +  K+G Q+H    + GL   A V   M          
Sbjct: 108 FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM 167

Query: 133 ---------------------VAFYASSGDIDSSVSVFNRIS----EPSSLLFNSMIRAY 192
                                +  YA  G ++  V + + +     E + + +N ++  +
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227

Query: 193 ARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFDF 252
            R G+ +  V  +  +H  GF     T   VL S  D   + MG+ +HG +++ GL  D 
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287

Query: 253 YVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPCR 312
            V +++IDMYGK G +     +F+   + +    NA + G  ++G +D A+ +FE    +
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347

Query: 313 ----NIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALE 372
               N+VSWT++I+G +Q+G   +AL LF EM  + +GV+PN VTI S+LPAC   +AL 
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALG 407

Query: 373 RGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITA 432
            GR  H  A R+ L+ N  V  AL  MYAKCG +  ++  F+ +    K LV WN+++  
Sbjct: 408 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSLMNG 467

Query: 433 YASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINP 492
           ++ +G   E +S F  +++  ++PD I+FT LLS C   GL D G KYF  MS  Y I P
Sbjct: 468 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 527

Query: 493 RAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMAEIAARKL 552
           R EHY+C+V+LLGRAG+L EA  L+ EMP      +WG+LL +CR   N+++AEIAA KL
Sbjct: 528 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL 587

Query: 553 FVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGG 612
           F LEPEN G YVLLSN+YA  G W EVD +R  ++S G KK+PGCSWI++  + +  L G
Sbjct: 588 FHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAG 647

Query: 613 DRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGIL 672
           D+SHPQ  +I   ++ + ++M+ +G+ P+  + LHD+ E+E+E  L  HSEKLAV FG+L
Sbjct: 648 DKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLL 707

Query: 673 NTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
           NT   T L+V KNLRICGDCH  + FIS   GREI +RD NRFHHFK G CSCGD+W
Sbjct: 708 NTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760

[Close]
BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 3.0e-138
Identity = 251/629 (39.90%), Postives = 374/629 (59.46%), Query Frame = 1 

Query: 52  LRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAF 111
           L+  ++ LS    P  ++Y  +      ++ L    +VH H+L  G      + +K++  
Sbjct: 62  LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121

Query: 112 YASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTF 171
           Y+  G +D +  VF++  + +  ++N++ RA    G  E ++  Y+ M+  G     FT+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 172 PFVLKSCV----DLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFD 231
            +VLK+CV     +  +  GK +H  + R G     Y+ T+L+DMY + G          
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG---------- 241

Query: 232 NMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSL 291
                                C+D A  +F  MP RN+VSW+ MI+ Y+++G A +AL  
Sbjct: 242 ---------------------CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 301

Query: 292 FDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMY 351
           F EM++E     PN VT++SVL ACA  +ALE+G+ IH    R GL S   V+ AL  MY
Sbjct: 302 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 361

Query: 352 AKCGSLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDIT 411
            +CG L   +  FDR+   ++ +V+WN++I++Y  +G+G +A+  F EM+  G  P  +T
Sbjct: 362 GRCGKLEVGQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 421

Query: 412 FTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEM 471
           F  +L  CSH GLV+ G + F  M   + I P+ EHYAC+VDLLGRA RL EA+K+V +M
Sbjct: 422 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 481

Query: 472 PMPAGPSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVD 531
               GP +WGSLL +CR H N+E+AE A+R+LF LEP+N GNYVLL+++YAEA  W EV 
Sbjct: 482 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 541

Query: 532 KLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVP 591
           +++ +L+ +G +K PG  W+E+  K + F+  D  +P  ++I+ FL  L E MK  GY+P
Sbjct: 542 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 601

Query: 592 DTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFIS 651
            T  VL+++  EEKE  ++ HSEKLA+AFG++NTS    +R+TKNLR+C DCH    FIS
Sbjct: 602 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 657

Query: 652 EIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
           +   +EI+VRDVNRFH FK G CSCGDYW
Sbjct: 662 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 4.3e-137
Identity = 245/595 (41.18%), Postives = 359/595 (60.34%), Query Frame = 1 

Query: 83  LKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEPSSLLFNSMIRA 142
           L LG  +H   +   +     V + ++  Y S GD+DS+  VF  I E   + +NSMI  
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206

Query: 143 YARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFD 202
           + + G  ++ +  +  M S      + T   VL +C  + ++  G+ V   I    +  +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266

Query: 203 FYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPC 262
             +A +++DMY KCG I DA ++FD M  +D   W  +L GY  S   +AA  +   MP 
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326

Query: 263 RNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGR 322
           ++IV+W  +IS Y Q+G   +AL +F E+ +    ++ N +T++S L ACAQ  ALE GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALELGR 386

Query: 323 QIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITAYAS 382
            IH    + G+  N  V  AL  MY+KCG L  +R  F+ + + +  +  W+ MI   A 
Sbjct: 387 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD--VFVWSAMIGGLAM 446

Query: 383 YGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAE 442
           +G G EAV  F +M +A ++P+ +TFT +   CSH+GLVD     F+ M S Y I P  +
Sbjct: 447 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 506

Query: 443 HYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMAEIAARKLFVL 502
           HYAC+VD+LGR+G L +A K ++ MP+P   S+WG+LL AC+ H NL +AE+A  +L  L
Sbjct: 507 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 566

Query: 503 EPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRS 562
           EP N G +VLLSN+YA+ G+W+ V +LR  ++  G KK PGCS IEI+G  H FL GD +
Sbjct: 567 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 626

Query: 563 HPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEE-KEFNLIAHSEKLAVAFGILNT 622
           HP ++++Y  L  + EK+K+ GY P+ S VL  I EEE KE +L  HSEKLA+ +G+++T
Sbjct: 627 HPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST 686

Query: 623 SAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
            A  V+RV KNLR+CGDCH+    IS++Y REI+VRD  RFHHF+ G CSC D+W
Sbjct: 687 EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 483.8 bits (1244), Expect = 3.1e-135
Identity = 255/636 (40.09%), Postives = 377/636 (59.28%), Query Frame = 1 

Query: 46  ISCLATLRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRG-LQPTALV 105
           +  L  LR ++     PD   I S  P    L    +L+ G ++HA+ L  G L   + V
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKELHAYALKNGSLDENSFV 343

Query: 106 GSKMVAFYASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMH-SWG 165
           GS +V  Y +   + S   VF+ + +    L+N+MI  Y++    +  +  +  M  S G
Sbjct: 344 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 403

Query: 166 FTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAA 225
                 T   V+ +CV   +    + +HG +++ GL  D +V  +L+DMY + G+I+ A 
Sbjct: 404 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 463

Query: 226 KVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPC--RNIVSWTTMISGYSQSGLA 285
           ++F  M  RD+  WN ++ GY+ S   + A+ +  +M    R +    + +S        
Sbjct: 464 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-------- 523

Query: 286 QQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLI 345
                           ++PN +T+M++LP+CA  SAL +G++IH  A +  L ++ +V  
Sbjct: 524 ----------------LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 583

Query: 346 ALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGI 405
           AL  MYAKCG L  +R  FD++   +K ++ WN +I AY  +G+G EA+   R M+  G+
Sbjct: 584 ALVDMYAKCGCLQMSRKVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 643

Query: 406 QPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEAS 465
           +P+++TF  + + CSHSG+VD GL+ F  M   Y + P ++HYACVVDLLGRAGR+ EA 
Sbjct: 644 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 703

Query: 466 KLVDEMPMPAGPS-IWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEA 525
           +L++ MP     +  W SLL A R H NLE+ EIAA+ L  LEP    +YVLL+N+Y+ A
Sbjct: 704 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 763

Query: 526 GRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKM 585
           G W +  ++R  +K QG +K PGCSWIE   + H F+ GD SHPQ++++  +LE L E+M
Sbjct: 764 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 823

Query: 586 KAAGYVPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCH 645
           +  GYVPDTS VLH++ E+EKE  L  HSEKLA+AFGILNTS  T++RV KNLR+C DCH
Sbjct: 824 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 883

Query: 646 TAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
            A  FIS+I  REI++RDV RFH FK G+CSCGDYW
Sbjct: 884 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.6e-134
Identity = 252/604 (41.72%), Postives = 352/604 (58.28%), Query Frame = 1 

Query: 73  VFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEPS 132
           VF       L+ LG  VH+  +           + ++  Y+  GD+DS+ +VF  +S+ S
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 133 SLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHG 192
            + + SMI  YAR G A   V  +  M   G +   +T   VL  C     +  GK VH 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 193 LILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDA 252
            I    L FD +V+ +L+DMY KCG + +A  VF  M V+D                   
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD------------------- 481

Query: 253 AVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPAC 312
                       I+SW T+I GYS++  A +ALSLF+ ++ E+    P+  T+  VLPAC
Sbjct: 482 ------------IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPAC 541

Query: 313 AQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVA 372
           A  SA ++GR+IH    R G  S+  V  +L  MYAKCG+L  A   FD ++   K LV+
Sbjct: 542 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA--SKDLVS 601

Query: 373 WNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMS 432
           W  MI  Y  +G G EA++ F +M QAGI+ D+I+F  LL  CSHSGLVD G ++FN M 
Sbjct: 602 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 661

Query: 433 STYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMA 492
               I P  EHYAC+VD+L R G L +A + ++ MP+P   +IWG+LL  CR H ++++A
Sbjct: 662 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 721

Query: 493 EIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGK 552
           E  A K+F LEPENTG YVL++N+YAEA +W++V +LR  +  +G +K+PGCSWIEI G+
Sbjct: 722 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 781

Query: 553 AHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEKL 612
            ++F+ GD S+P+ + I  FL  +  +M   GY P T Y L D  E EKE  L  HSEKL
Sbjct: 782 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 841

Query: 613 AVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSC 672
           A+A GI+++    ++RVTKNLR+CGDCH    F+S++  REIV+RD NRFH FK G CSC
Sbjct: 842 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 871

Query: 673 GDYW 677
             +W
Sbjct: 902 RGFW 871

[Close]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match: A0A0A0KEZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430650 PE=4 SV=1)

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 611/679 (89.99%), Postives = 638/679 (93.96%), Query Frame = 1 

Query: 1   MHNGIRLSISIPNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCL---ATLRNLLQ 60
           MHNGIRLSISIP P+H+LFR LHSYSGS HID  PPPS P FKCSIS L   ATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPSHLLFRILHSYSGSAHIDTVPPPSSPPFKCSISPLTISATLQNLLQ 60

Query: 61  PLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGD 120
           PLSAP  PPI SYAPVFQFLTG N+LKLGHQVHAHML+RGLQPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKS 180
           IDSSVSVFN I EPSSLLFNSMIRAYARYGFAER VATYF+MHSWGFTG YFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 CVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAW 240
            V+LLSVWMGKCVHGLILR+GLQFD YVATSLI +YGKCGEINDA KVFDNM +RDV++W
Sbjct: 181 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSG 300
           NALLAGY KSGCIDAA+AIFERMP RNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S LERGRQIHELACRMGL SNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 YCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420
            CFD+L+R+EK L+AWNTMITAYASYGHGL+AVSTFREMIQAGIQPDDITFTGLLSGCSH
Sbjct: 361 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GLKYFN+MS+TYSINPR EHYACV DLLGRAGRLAEASKLV EMPMPAGPSIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 480

Query: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQG 540
           SLLAACRKHRNLEMAE AARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI+KSQG
Sbjct: 481 SLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDIS 600
           TKKSPGCSWIEINGKAHMFLGGD SHPQ KEIY+FLEALPEKMKAAGY PDTSYVLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVR 660
           EEEKEFNLIAHSEKLAVAFGILNT AETVLRVTKNLRICGDCHTAMVFISEIYGRE++VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKGGSCSCGDYW 677
           D+NRFHHFKGG CSCGDYW
Sbjct: 661 DINRFHHFKGGCCSCGDYW 679

[Close]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match: M5X3I7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002838mg PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 3.2e-264
Identity = 440/625 (70.40%), Postives = 515/625 (82.40%), Query Frame = 1 

Query: 53  RNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFY 112
           R LL+ L A D   I  YAP+FQ LT QNLLKLG QVHA M +RGL+P A +G+KMVA Y
Sbjct: 4   RTLLKSLLAQDPTCISFYAPIFQSLTSQNLLKLGQQVHAQMALRGLEPNAFLGAKMVAMY 63

Query: 113 ASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFP 172
           ASS ++DS+V++F+R++ PS+LL+NS+IRAY  YG++E+ +  Y  MH  G  G  FT+P
Sbjct: 64  ASSDNLDSAVNIFHRVNNPSTLLYNSIIRAYTLYGYSEKTMEIYGQMHRLGLKGDNFTYP 123

Query: 173 FVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVR 232
           FVLK C +L S+W+GKCVH L LR+GL  D YV TSLIDMY KCGE++DA   FD M VR
Sbjct: 124 FVLKCCANLSSIWLGKCVHSLSLRIGLASDMYVGTSLIDMYVKCGEMSDARSSFDKMTVR 183

Query: 233 DVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMI 292
           DV++WNAL+AGYMK G I  A  +F RMPC+NIVSWT MISGY+Q+GLA+QAL LFDEM+
Sbjct: 184 DVSSWNALIAGYMKDGEICFAEDLFRRMPCKNIVSWTAMISGYTQNGLAEQALVLFDEML 243

Query: 293 KEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGS 352
           ++DS V+PNWVTIMSVLPACA S+ALERGRQIH  A R GL SN S+  AL AMYAKCGS
Sbjct: 244 RKDSEVKPNWVTIMSVLPACAHSAALERGRQIHNFASRTGLDSNTSIQTALLAMYAKCGS 303

Query: 353 LADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLL 412
           L+DAR CF+R+ ++E  LVAWNTMITAYAS+G G EAVSTF +MI AG+QPD+ITFTGLL
Sbjct: 304 LSDARQCFERVHQTENSLVAWNTMITAYASHGRGSEAVSTFEDMIGAGLQPDNITFTGLL 363

Query: 413 SGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAG 472
           SGCSHSGLVD GLKYFN M + YSI PR EHYACVVDLLGRAGRL EA  LV +MPM AG
Sbjct: 364 SGCSHSGLVDGGLKYFNCMKTIYSIEPRVEHYACVVDLLGRAGRLVEAIDLVSKMPMQAG 423

Query: 473 PSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 532
           PSIWG+LL+ACRKH NLE+AEIAARKLF+LEP+N+GNYVLLSN+YA+AG W+EVD LRA+
Sbjct: 424 PSIWGALLSACRKHHNLEIAEIAARKLFILEPDNSGNYVLLSNIYADAGMWKEVDDLRAL 483

Query: 533 LKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIY-IFLEALPEKMKAAGYVPDTSY 592
           LKSQG KK+PGCSWIE+NGKAH+FLGGD  HPQAKEIY + LE LP K+KAAGYVPDTS+
Sbjct: 484 LKSQGMKKNPGCSWIEVNGKAHLFLGGDTCHPQAKEIYEVLLEELPNKIKAAGYVPDTSF 543

Query: 593 VLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYG 652
           VLHD+SEEEKE NL  HSEKLA+AFG+LN S   VLRVTKNLRICGDCHTA   IS IY 
Sbjct: 544 VLHDVSEEEKEHNLTTHSEKLAIAFGLLNASPGVVLRVTKNLRICGDCHTATKLISRIYE 603

Query: 653 REIVVRDVNRFHHFKGGSCSCGDYW 677
           REI+VRD+NRFHHF+ G CSCGDYW
Sbjct: 604 REIIVRDLNRFHHFRDGCCSCGDYW 628

[Close]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match: K4B1Y4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 6.0e-255
Identity = 423/625 (67.68%), Postives = 501/625 (80.16%), Query Frame = 1 

Query: 52  LRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAF 111
           L+ +LQPL     PP  +YA +FQFL G+N +KLG QVHAHM +RG+ P  LV +KMVA 
Sbjct: 2   LKIILQPLYQNSFPP-STYASIFQFLVGKNFVKLGQQVHAHMAVRGVSPNGLVAAKMVAM 61

Query: 112 YASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTF 171
           YASSG+IDS+  +F+  +EPSSLL+N+MIRA   YG  +R +  +F MHS GF G  FTF
Sbjct: 62  YASSGEIDSASYIFDSATEPSSLLYNAMIRALTLYGITKRTIEIFFQMHSLGFRGDNFTF 121

Query: 172 PFVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPV 231
           PFV KSC DL  VW GKCVH LILR G  FD YV TSL+DMY KCG++ DA K+FD MPV
Sbjct: 122 PFVFKSCADLSDVWCGKCVHSLILRSGFVFDMYVGTSLVDMYVKCGDLIDARKLFDEMPV 181

Query: 232 RDVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEM 291
           RDV+AWN L+AGYMK G    A  +FE MP RNIVSWT MISGY+Q+GLA ++L LFD+M
Sbjct: 182 RDVSAWNVLIAGYMKDGLFKDAEELFEEMPIRNIVSWTAMISGYAQNGLADESLQLFDKM 241

Query: 292 IKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCG 351
           +  DS VRPNWVT+MSVLPACA S+AL+RG++IH  A   GL  N SV  AL AMYAKCG
Sbjct: 242 LDPDSEVRPNWVTVMSVLPACAHSAALDRGKKIHSFAREAGLEKNPSVQTALIAMYAKCG 301

Query: 352 SLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGL 411
           SL DAR CFD+++  EK LVAWNTMITAYAS+G G EAVSTF +M++AGIQPD ITFTGL
Sbjct: 302 SLVDARLCFDQINPREKKLVAWNTMITAYASHGFGREAVSTFEDMLRAGIQPDKITFTGL 361

Query: 412 LSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPA 471
           LSGCSHSGLVD+GL+YF+ MS  Y +    +HYACVVDLLGRAGRL EA  L+ +MPM A
Sbjct: 362 LSGCSHSGLVDVGLRYFDCMSLVYFVEKGHDHYACVVDLLGRAGRLVEAYNLISQMPMAA 421

Query: 472 GPSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRA 531
           GPSIWGSLLAA R HRNLE+AE+AA+KLF+LEP+N+GNY++LSNMYAEAG W+EV  LR 
Sbjct: 422 GPSIWGSLLAAGRSHRNLEIAELAAKKLFILEPDNSGNYIVLSNMYAEAGMWEEVTHLRI 481

Query: 532 ILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSY 591
             KS+   KSPGCSWIE +GKAH+FLGGD SHPQA++IY+FLEALP K+KAAGY+PDT++
Sbjct: 482 QQKSRRIMKSPGCSWIEFDGKAHLFLGGDTSHPQAEQIYLFLEALPAKIKAAGYMPDTTF 541

Query: 592 VLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYG 651
            LHD+SEEEKE NL +HSE+LA+AFGILNTS  TVLRVTKNLRICGDCHTA+  +S+IY 
Sbjct: 542 ALHDVSEEEKEQNLSSHSERLAIAFGILNTSPGTVLRVTKNLRICGDCHTAIKLVSKIYE 601

Query: 652 REIVVRDVNRFHHFKGGSCSCGDYW 677
           REI+VRDVNRFHHFK GSCSC DYW
Sbjct: 602 REIIVRDVNRFHHFKDGSCSCRDYW 625

[Close]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match: W9QT12_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002732 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 2.4e-251
Identity = 429/671 (63.93%), Postives = 527/671 (78.54%), Query Frame = 1 

Query: 7   LSISIPNPNHILFRTLHSYSGSFHIDIA-PPPSFPSFKCSISCLATLRNLLQPLSAPDLP 66
           L   IP P+    RT        H D++ P    P +   +S ++TLR+L Q     D P
Sbjct: 12  LPFRIPKPHQT--RTPSQSHSQLHFDVSLPKHQIPPW---LSLVSTLRSLAQ-----DPP 71

Query: 67  PIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVF 126
            + SYA +FQ LTG+NLL+LG QVH+HM +R L+P A +G+KM+A YAS+GD+ S+V+VF
Sbjct: 72  QVSSYAAIFQSLTGKNLLRLGRQVHSHMSLRALEPDAFLGAKMIAMYASAGDLRSAVAVF 131

Query: 127 NRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVW 186
            RI  PS+LL NS+IRAY+ + F ++ +  YF M S G    +FT+PFVLKSC DL  V 
Sbjct: 132 RRIKYPSALLCNSIIRAYSWHWFPKKTIGVYFRMRSLGLKADHFTYPFVLKSCADLSDVR 191

Query: 187 MGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYM 246
           MG+  HGL LR G + DFYV TSLI+MY KCG I DA K+FD M VRD+++WNAL+AGYM
Sbjct: 192 MGRYAHGLSLRTGFEEDFYVGTSLINMYVKCGGIGDARKMFDVMTVRDISSWNALIAGYM 251

Query: 247 KSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTI 306
           K G I  A  +F RM  RNIVSWT MISGY+Q+GLA QAL LFD+M+++DSG++P WVTI
Sbjct: 252 KIGEIRLAEDLFGRMVRRNIVSWTAMISGYAQNGLAGQALVLFDKMLEDDSGIKPTWVTI 311

Query: 307 MSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSR 366
           MSVLPACA S+ALERGR+IH+LA R+GL S+ SV  AL AMYA+CGSLA+A  CFDR+ +
Sbjct: 312 MSVLPACAHSAALERGREIHKLASRIGLDSDVSVQSALIAMYARCGSLAEACQCFDRIHQ 371

Query: 367 SEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGL 426
            +K LV WNTMI+AYAS+G GLE+VSTF +MI+A IQPD I+FTGLLSGCSHSGLVD+G+
Sbjct: 372 HKKDLVVWNTMISAYASHGRGLESVSTFEDMIRARIQPDIISFTGLLSGCSHSGLVDLGI 431

Query: 427 KYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRK 486
           KYFN M + Y++ P  +H ACVVDLLGRAGRL EA +L+D+MPM AG S WG+LLAACRK
Sbjct: 432 KYFNRMKTMYNVEPEVQHCACVVDLLGRAGRLVEAKELIDKMPMQAGASAWGALLAACRK 491

Query: 487 HRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCS 546
           HRNLE+AE+AA+KLFVLEP ++ NYV LSNMYAEAG W+EV  LR +LK +G +K+PGCS
Sbjct: 492 HRNLELAEVAAKKLFVLEPYSSANYVHLSNMYAEAGMWKEVANLRDLLKYRGIRKTPGCS 551

Query: 547 WIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNL 606
           WIE+NGKAHMFLGGD SHPQ +EIY+FLE+LPEKMK AGYVPDTS VLHD+SEEEKE NL
Sbjct: 552 WIEVNGKAHMFLGGDTSHPQTREIYMFLESLPEKMKQAGYVPDTSPVLHDLSEEEKEHNL 611

Query: 607 IAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHF 666
            +HSEKLA+AFG+LNTS  T++RVTKNLRIC DCHTA  FIS+I+ REI+VRD+NRFHHF
Sbjct: 612 TSHSEKLAIAFGLLNTSPSTIIRVTKNLRICVDCHTATKFISKIFRREIIVRDLNRFHHF 671

Query: 667 KGGSCSCGDYW 677
             GSCSCGDYW
Sbjct: 672 TDGSCSCGDYW 672

[Close]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match: A0A0D2SZE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G028200 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 5.3e-251
Identity = 429/665 (64.51%), Postives = 510/665 (76.69%), Query Frame = 1 

Query: 12  PNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCLATLRNLLQPLSAPDLPPIRSYA 71
           P P   L  T+H +          P  FP         +TL  LLQP+S  + PP  SYA
Sbjct: 17  PQPQAFL-STIHPHIDPSQTKCTTPKPFPY-------TSTLPTLLQPISDQNPPPHLSYA 76

Query: 72  PVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEP 131
           P+FQFLTGQN LKLG Q+HAHM + GLQP A +G+KMVA YASSGD++S+V+VF +I +P
Sbjct: 77  PLFQFLTGQNFLKLGQQIHAHMTLHGLQPNAFLGAKMVAMYASSGDLESAVTVFRKIKDP 136

Query: 132 SSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVH 191
           +SLL+NS+IRAY   G+  + +  Y  MHS    G  FTFPFVLKSC ++L VWMG+CVH
Sbjct: 137 TSLLYNSIIRAYTNNGYPLKTIDIYREMHSLRLKGDNFTFPFVLKSCANVLDVWMGECVH 196

Query: 192 GLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCID 251
           G  LR GL+ D YV TSLID Y K GE+ DA KVFD M VR V++WNAL+AGYMK G I 
Sbjct: 197 GQSLRFGLELDAYVGTSLIDFYVKVGELRDANKVFDLMTVRAVSSWNALIAGYMKEGEIR 256

Query: 252 AAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPA 311
            A  +F  MPCRNIVSWT+MISGY+Q+GLA++ALSLFDEM+KEDS V+PNWVTIMSVLPA
Sbjct: 257 VAEDLFRGMPCRNIVSWTSMISGYTQNGLAEEALSLFDEMLKEDSEVKPNWVTIMSVLPA 316

Query: 312 CAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILV 371
           CA S++ ERGR+I+E   R+GL SN SV  AL AMYAKCGSL  AR CFDR+  +EK L 
Sbjct: 317 CAHSASFERGRRINEYVNRIGLESNPSVQTALIAMYAKCGSLVSARCCFDRILENEKNLC 376

Query: 372 AWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYM 431
           AWNTMITAYAS+G GLE+VSTF  M++AG+ PD ITFTGLLSGCSHSG+V+ GL+YFN M
Sbjct: 377 AWNTMITAYASHGQGLESVSTFENMVRAGVYPDAITFTGLLSGCSHSGIVEFGLRYFNSM 436

Query: 432 SSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEM 491
            + YS+ PR EHYACVVDLL RAGRL EA + + ++PM  GPSIWG+LLAACRK RNLE+
Sbjct: 437 QTKYSVEPRHEHYACVVDLLARAGRLVEAKEFIKKIPMQPGPSIWGALLAACRKSRNLEI 496

Query: 492 AEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEING 551
           AEIAA++LFVLEPEN+ NY+LLSNMYAEAG W+EVDKLRA LK +G KK+PGCSWIEI G
Sbjct: 497 AEIAAKELFVLEPENSCNYILLSNMYAEAGMWKEVDKLRARLKCEGIKKNPGCSWIEIKG 556

Query: 552 KAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEK 611
           KAH+FL GD SHPQ+KEIY  LEALPEK+KAAGY+P+T +VLHDISEEEKE NLI H   
Sbjct: 557 KAHLFLSGDLSHPQSKEIYNLLEALPEKIKAAGYIPNTGFVLHDISEEEKEQNLIIH--- 616

Query: 612 LAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCS 671
                         ++R+TKNLRICGDCHT + FIS+IY REIVVRDVNRFHHF+ G+CS
Sbjct: 617 --------------IIRITKNLRICGDCHTVIKFISKIYEREIVVRDVNRFHHFRHGACS 656

Query: 672 CGDYW 677
           CGDYW
Sbjct: 677 CGDYW 656

[Close]
BLAST of Lsi05G001780.1 vs. TAIR10
Match: AT1G20230.1 (AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 493.8 bits (1270), Expect = 1.7e-139
Identity = 270/717 (37.66%), Postives = 393/717 (54.81%), Query Frame = 1 

Query: 13  NPNHILFRTLHSYSG-------SFHIDIAPPPSFPSFKCSISCLATLRNLLQPLSAPD-- 72
           N  +I  + + SYS           +   P P+  SF   I  L   +   Q +      
Sbjct: 48  NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRM 107

Query: 73  -----LPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKM---------- 132
                +P       +F+     +  K+G Q+H    + GL   A V   M          
Sbjct: 108 FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM 167

Query: 133 ---------------------VAFYASSGDIDSSVSVFNRIS----EPSSLLFNSMIRAY 192
                                +  YA  G ++  V + + +     E + + +N ++  +
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227

Query: 193 ARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFDF 252
            R G+ +  V  +  +H  GF     T   VL S  D   + MG+ +HG +++ GL  D 
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287

Query: 253 YVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPCR 312
            V +++IDMYGK G +     +F+   + +    NA + G  ++G +D A+ +FE    +
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347

Query: 313 ----NIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALE 372
               N+VSWT++I+G +Q+G   +AL LF EM  + +GV+PN VTI S+LPAC   +AL 
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREM--QVAGVKPNHVTIPSMLPACGNIAALG 407

Query: 373 RGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITA 432
            GR  H  A R+ L+ N  V  AL  MYAKCG +  ++  F+ +    K LV WN+++  
Sbjct: 408 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSLMNG 467

Query: 433 YASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINP 492
           ++ +G   E +S F  +++  ++PD I+FT LLS C   GL D G KYF  MS  Y I P
Sbjct: 468 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 527

Query: 493 RAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMAEIAARKL 552
           R EHY+C+V+LLGRAG+L EA  L+ EMP      +WG+LL +CR   N+++AEIAA KL
Sbjct: 528 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL 587

Query: 553 FVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGG 612
           F LEPEN G YVLLSN+YA  G W EVD +R  ++S G KK+PGCSWI++  + +  L G
Sbjct: 588 FHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAG 647

Query: 613 DRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGIL 672
           D+SHPQ  +I   ++ + ++M+ +G+ P+  + LHD+ E+E+E  L  HSEKLAV FG+L
Sbjct: 648 DKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLL 707

Query: 673 NTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
           NT   T L+V KNLRICGDCH  + FIS   GREI +RD NRFHHFK G CSCGD+W
Sbjct: 708 NTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760

[Close]
BLAST of Lsi05G001780.1 vs. TAIR10
Match: AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 493.8 bits (1270), Expect = 1.7e-139
Identity = 251/629 (39.90%), Postives = 374/629 (59.46%), Query Frame = 1 

Query: 52  LRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAF 111
           L+  ++ LS    P  ++Y  +      ++ L    +VH H+L  G      + +K++  
Sbjct: 62  LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121

Query: 112 YASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTF 171
           Y+  G +D +  VF++  + +  ++N++ RA    G  E ++  Y+ M+  G     FT+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 172 PFVLKSCV----DLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFD 231
            +VLK+CV     +  +  GK +H  + R G     Y+ T+L+DMY + G          
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG---------- 241

Query: 232 NMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSL 291
                                C+D A  +F  MP RN+VSW+ MI+ Y+++G A +AL  
Sbjct: 242 ---------------------CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 301

Query: 292 FDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMY 351
           F EM++E     PN VT++SVL ACA  +ALE+G+ IH    R GL S   V+ AL  MY
Sbjct: 302 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 361

Query: 352 AKCGSLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDIT 411
            +CG L   +  FDR+   ++ +V+WN++I++Y  +G+G +A+  F EM+  G  P  +T
Sbjct: 362 GRCGKLEVGQRVFDRM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 421

Query: 412 FTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEM 471
           F  +L  CSH GLV+ G + F  M   + I P+ EHYAC+VDLLGRA RL EA+K+V +M
Sbjct: 422 FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 481

Query: 472 PMPAGPSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVD 531
               GP +WGSLL +CR H N+E+AE A+R+LF LEP+N GNYVLL+++YAEA  W EV 
Sbjct: 482 RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 541

Query: 532 KLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVP 591
           +++ +L+ +G +K PG  W+E+  K + F+  D  +P  ++I+ FL  L E MK  GY+P
Sbjct: 542 RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIP 601

Query: 592 DTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFIS 651
            T  VL+++  EEKE  ++ HSEKLA+AFG++NTS    +R+TKNLR+C DCH    FIS
Sbjct: 602 QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 657

Query: 652 EIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
           +   +EI+VRDVNRFH FK G CSCGDYW
Sbjct: 662 KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Lsi05G001780.1 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 490.0 bits (1260), Expect = 2.4e-138
Identity = 245/595 (41.18%), Postives = 359/595 (60.34%), Query Frame = 1 

Query: 83  LKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEPSSLLFNSMIRA 142
           L LG  +H   +   +     V + ++  Y S GD+DS+  VF  I E   + +NSMI  
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206

Query: 143 YARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFD 202
           + + G  ++ +  +  M S      + T   VL +C  + ++  G+ V   I    +  +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266

Query: 203 FYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPC 262
             +A +++DMY KCG I DA ++FD M  +D   W  +L GY  S   +AA  +   MP 
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326

Query: 263 RNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGR 322
           ++IV+W  +IS Y Q+G   +AL +F E+ +    ++ N +T++S L ACAQ  ALE GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALELGR 386

Query: 323 QIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITAYAS 382
            IH    + G+  N  V  AL  MY+KCG L  +R  F+ + + +  +  W+ MI   A 
Sbjct: 387 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD--VFVWSAMIGGLAM 446

Query: 383 YGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAE 442
           +G G EAV  F +M +A ++P+ +TFT +   CSH+GLVD     F+ M S Y I P  +
Sbjct: 447 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 506

Query: 443 HYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMAEIAARKLFVL 502
           HYAC+VD+LGR+G L +A K ++ MP+P   S+WG+LL AC+ H NL +AE+A  +L  L
Sbjct: 507 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 566

Query: 503 EPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRS 562
           EP N G +VLLSN+YA+ G+W+ V +LR  ++  G KK PGCS IEI+G  H FL GD +
Sbjct: 567 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 626

Query: 563 HPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEE-KEFNLIAHSEKLAVAFGILNT 622
           HP ++++Y  L  + EK+K+ GY P+ S VL  I EEE KE +L  HSEKLA+ +G+++T
Sbjct: 627 HPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST 686

Query: 623 SAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
            A  V+RV KNLR+CGDCH+    IS++Y REI+VRD  RFHHF+ G CSC D+W
Sbjct: 687 EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Lsi05G001780.1 vs. TAIR10
Match: AT3G57430.1 (AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 483.8 bits (1244), Expect = 1.7e-136
Identity = 255/636 (40.09%), Postives = 377/636 (59.28%), Query Frame = 1 

Query: 46  ISCLATLRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRG-LQPTALV 105
           +  L  LR ++     PD   I S  P    L    +L+ G ++HA+ L  G L   + V
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKELHAYALKNGSLDENSFV 343

Query: 106 GSKMVAFYASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMH-SWG 165
           GS +V  Y +   + S   VF+ + +    L+N+MI  Y++    +  +  +  M  S G
Sbjct: 344 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 403

Query: 166 FTGGYFTFPFVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAA 225
                 T   V+ +CV   +    + +HG +++ GL  D +V  +L+DMY + G+I+ A 
Sbjct: 404 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 463

Query: 226 KVFDNMPVRDVTAWNALLAGYMKSGCIDAAVAIFERMPC--RNIVSWTTMISGYSQSGLA 285
           ++F  M  RD+  WN ++ GY+ S   + A+ +  +M    R +    + +S        
Sbjct: 464 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-------- 523

Query: 286 QQALSLFDEMIKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLI 345
                           ++PN +T+M++LP+CA  SAL +G++IH  A +  L ++ +V  
Sbjct: 524 ----------------LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 583

Query: 346 ALTAMYAKCGSLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGI 405
           AL  MYAKCG L  +R  FD++   +K ++ WN +I AY  +G+G EA+   R M+  G+
Sbjct: 584 ALVDMYAKCGCLQMSRKVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 643

Query: 406 QPDDITFTGLLSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEAS 465
           +P+++TF  + + CSHSG+VD GL+ F  M   Y + P ++HYACVVDLLGRAGR+ EA 
Sbjct: 644 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 703

Query: 466 KLVDEMPMPAGPS-IWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEA 525
           +L++ MP     +  W SLL A R H NLE+ EIAA+ L  LEP    +YVLL+N+Y+ A
Sbjct: 704 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 763

Query: 526 GRWQEVDKLRAILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKM 585
           G W +  ++R  +K QG +K PGCSWIE   + H F+ GD SHPQ++++  +LE L E+M
Sbjct: 764 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 823

Query: 586 KAAGYVPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCH 645
           +  GYVPDTS VLH++ E+EKE  L  HSEKLA+AFGILNTS  T++RV KNLR+C DCH
Sbjct: 824 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 883

Query: 646 TAMVFISEIYGREIVVRDVNRFHHFKGGSCSCGDYW 677
            A  FIS+I  REI++RDV RFH FK G+CSCGDYW
Sbjct: 884 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of Lsi05G001780.1 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-135
Identity = 252/604 (41.72%), Postives = 352/604 (58.28%), Query Frame = 1 

Query: 73  VFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEPS 132
           VF       L+ LG  VH+  +           + ++  Y+  GD+DS+ +VF  +S+ S
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 133 SLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVHG 192
            + + SMI  YAR G A   V  +  M   G +   +T   VL  C     +  GK VH 
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421

Query: 193 LILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCIDA 252
            I    L FD +V+ +L+DMY KCG + +A  VF  M V+D                   
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD------------------- 481

Query: 253 AVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPAC 312
                       I+SW T+I GYS++  A +ALSLF+ ++ E+    P+  T+  VLPAC
Sbjct: 482 ------------IISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPAC 541

Query: 313 AQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILVA 372
           A  SA ++GR+IH    R G  S+  V  +L  MYAKCG+L  A   FD ++   K LV+
Sbjct: 542 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA--SKDLVS 601

Query: 373 WNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYMS 432
           W  MI  Y  +G G EA++ F +M QAGI+ D+I+F  LL  CSHSGLVD G ++FN M 
Sbjct: 602 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 661

Query: 433 STYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEMA 492
               I P  EHYAC+VD+L R G L +A + ++ MP+P   +IWG+LL  CR H ++++A
Sbjct: 662 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 721

Query: 493 EIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEINGK 552
           E  A K+F LEPENTG YVL++N+YAEA +W++V +LR  +  +G +K+PGCSWIEI G+
Sbjct: 722 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 781

Query: 553 AHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEKL 612
            ++F+ GD S+P+ + I  FL  +  +M   GY P T Y L D  E EKE  L  HSEKL
Sbjct: 782 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 841

Query: 613 AVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCSC 672
           A+A GI+++    ++RVTKNLR+CGDCH    F+S++  REIV+RD NRFH FK G CSC
Sbjct: 842 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 871

Query: 673 GDYW 677
             +W
Sbjct: 902 RGFW 871

[Close]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match: gi|449445033|ref|XP_004140278.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis sativus])

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 611/679 (89.99%), Postives = 638/679 (93.96%), Query Frame = 1 

Query: 1   MHNGIRLSISIPNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCL---ATLRNLLQ 60
           MHNGIRLSISIP P+H+LFR LHSYSGS HID  PPPS P FKCSIS L   ATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPSHLLFRILHSYSGSAHIDTVPPPSSPPFKCSISPLTISATLQNLLQ 60

Query: 61  PLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGD 120
           PLSAP  PPI SYAPVFQFLTG N+LKLGHQVHAHML+RGLQPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKS 180
           IDSSVSVFN I EPSSLLFNSMIRAYARYGFAER VATYF+MHSWGFTG YFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 CVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAW 240
            V+LLSVWMGKCVHGLILR+GLQFD YVATSLI +YGKCGEINDA KVFDNM +RDV++W
Sbjct: 181 SVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSG 300
           NALLAGY KSGCIDAA+AIFERMP RNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S LERGRQIHELACRMGL SNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 YCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420
            CFD+L+R+EK L+AWNTMITAYASYGHGL+AVSTFREMIQAGIQPDDITFTGLLSGCSH
Sbjct: 361 NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GLKYFN+MS+TYSINPR EHYACV DLLGRAGRLAEASKLV EMPMPAGPSIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 480

Query: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQG 540
           SLLAACRKHRNLEMAE AARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI+KSQG
Sbjct: 481 SLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDIS 600
           TKKSPGCSWIEINGKAHMFLGGD SHPQ KEIY+FLEALPEKMKAAGY PDTSYVLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVR 660
           EEEKEFNLIAHSEKLAVAFGILNT AETVLRVTKNLRICGDCHTAMVFISEIYGRE++VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKGGSCSCGDYW 677
           D+NRFHHFKGG CSCGDYW
Sbjct: 661 DINRFHHFKGGCCSCGDYW 679

[Close]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match: gi|659112126|ref|XP_008456075.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis melo])

HSP 1 Score: 1250.0 bits (3233), Expect = 0.0e+00
Identity = 612/679 (90.13%), Postives = 638/679 (93.96%), Query Frame = 1 

Query: 1   MHNGIRLSISIPNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCL---ATLRNLLQ 60
           MHNGIRLSISIP P  +LFR LHSYSGS HI+  PPPS P FKCSIS L   ATL+NLLQ
Sbjct: 1   MHNGIRLSISIPTPTLLLFRILHSYSGSAHIETVPPPSSPLFKCSISPLTISATLQNLLQ 60

Query: 61  PLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGD 120
           PLSAP  PPI SYAPVFQFLTG N+LKLGHQVHAHML+RGLQPTALVGSKMVAFYASSGD
Sbjct: 61  PLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120

Query: 121 IDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKS 180
           IDSSVSVFN I EPSSLLFNSMIRAYARYGFAER VATYF+MHSWGFTG YFTFPFVLKS
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180

Query: 181 CVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAW 240
             DLLSVWMGKCVHGLILR+GL  D YVATSLID+YGKCGEIN+A KVFDNM +RDV++W
Sbjct: 181 SADLLSVWMGKCVHGLILRIGLHCDLYVATSLIDLYGKCGEINEAGKVFDNMTIRDVSSW 240

Query: 241 NALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSG 300
           NALLAGYMKSGC+DAAVAIFERMP RNIVSWTTMISGYSQSGLAQQALSLFDEM+KEDSG
Sbjct: 241 NALLAGYMKSGCVDAAVAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMMKEDSG 300

Query: 301 VRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADAR 360
           VRPNWVTIMSVLPACAQ S LERG QIHELACRMGL SNASVLIALTAMYAKCGSL DAR
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGTQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR 360

Query: 361 YCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420
            CFD+L+RSEK L+AWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH
Sbjct: 361 NCFDKLNRSEKNLIAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSH 420

Query: 421 SGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWG 480
           SGLVD+GLKYFN+MS+TYSINPR EHYACV DLLGRAGRLAEASKLVDEMPMPAG SIWG
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVDEMPMPAGASIWG 480

Query: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQG 540
           SLLAACRKHRNLEMAEIAARKLFVLEPEN+GNYVLLSNMYAEAGRWQEVDKLRAI+KSQG
Sbjct: 481 SLLAACRKHRNLEMAEIAARKLFVLEPENSGNYVLLSNMYAEAGRWQEVDKLRAIVKSQG 540

Query: 541 TKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDIS 600
           TKKSPGCSWIEINGKAHMFLGGD SHPQAKEIY+FLEALPEKMKAAGYVPDTSYVLHDIS
Sbjct: 541 TKKSPGCSWIEINGKAHMFLGGDTSHPQAKEIYMFLEALPEKMKAAGYVPDTSYVLHDIS 600

Query: 601 EEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVR 660
           EEEKEFNLIAHSEKLAVAFGILNT AETVLRVTKNLRICGDCHTAMVFISEIYGRE++VR
Sbjct: 601 EEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVR 660

Query: 661 DVNRFHHFKGGSCSCGDYW 677
           D+NRFHHFKGGSCSCGDYW
Sbjct: 661 DINRFHHFKGGSCSCGDYW 679

[Close]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match: gi|596016252|ref|XP_007218862.1| (hypothetical protein PRUPE_ppa002838mg [Prunus persica])

HSP 1 Score: 919.1 bits (2374), Expect = 4.6e-264
Identity = 440/625 (70.40%), Postives = 515/625 (82.40%), Query Frame = 1 

Query: 53  RNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFY 112
           R LL+ L A D   I  YAP+FQ LT QNLLKLG QVHA M +RGL+P A +G+KMVA Y
Sbjct: 4   RTLLKSLLAQDPTCISFYAPIFQSLTSQNLLKLGQQVHAQMALRGLEPNAFLGAKMVAMY 63

Query: 113 ASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFP 172
           ASS ++DS+V++F+R++ PS+LL+NS+IRAY  YG++E+ +  Y  MH  G  G  FT+P
Sbjct: 64  ASSDNLDSAVNIFHRVNNPSTLLYNSIIRAYTLYGYSEKTMEIYGQMHRLGLKGDNFTYP 123

Query: 173 FVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVR 232
           FVLK C +L S+W+GKCVH L LR+GL  D YV TSLIDMY KCGE++DA   FD M VR
Sbjct: 124 FVLKCCANLSSIWLGKCVHSLSLRIGLASDMYVGTSLIDMYVKCGEMSDARSSFDKMTVR 183

Query: 233 DVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMI 292
           DV++WNAL+AGYMK G I  A  +F RMPC+NIVSWT MISGY+Q+GLA+QAL LFDEM+
Sbjct: 184 DVSSWNALIAGYMKDGEICFAEDLFRRMPCKNIVSWTAMISGYTQNGLAEQALVLFDEML 243

Query: 293 KEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGS 352
           ++DS V+PNWVTIMSVLPACA S+ALERGRQIH  A R GL SN S+  AL AMYAKCGS
Sbjct: 244 RKDSEVKPNWVTIMSVLPACAHSAALERGRQIHNFASRTGLDSNTSIQTALLAMYAKCGS 303

Query: 353 LADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLL 412
           L+DAR CF+R+ ++E  LVAWNTMITAYAS+G G EAVSTF +MI AG+QPD+ITFTGLL
Sbjct: 304 LSDARQCFERVHQTENSLVAWNTMITAYASHGRGSEAVSTFEDMIGAGLQPDNITFTGLL 363

Query: 413 SGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAG 472
           SGCSHSGLVD GLKYFN M + YSI PR EHYACVVDLLGRAGRL EA  LV +MPM AG
Sbjct: 364 SGCSHSGLVDGGLKYFNCMKTIYSIEPRVEHYACVVDLLGRAGRLVEAIDLVSKMPMQAG 423

Query: 473 PSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAI 532
           PSIWG+LL+ACRKH NLE+AEIAARKLF+LEP+N+GNYVLLSN+YA+AG W+EVD LRA+
Sbjct: 424 PSIWGALLSACRKHHNLEIAEIAARKLFILEPDNSGNYVLLSNIYADAGMWKEVDDLRAL 483

Query: 533 LKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIY-IFLEALPEKMKAAGYVPDTSY 592
           LKSQG KK+PGCSWIE+NGKAH+FLGGD  HPQAKEIY + LE LP K+KAAGYVPDTS+
Sbjct: 484 LKSQGMKKNPGCSWIEVNGKAHLFLGGDTCHPQAKEIYEVLLEELPNKIKAAGYVPDTSF 543

Query: 593 VLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYG 652
           VLHD+SEEEKE NL  HSEKLA+AFG+LN S   VLRVTKNLRICGDCHTA   IS IY 
Sbjct: 544 VLHDVSEEEKEHNLTTHSEKLAIAFGLLNASPGVVLRVTKNLRICGDCHTATKLISRIYE 603

Query: 653 REIVVRDVNRFHHFKGGSCSCGDYW 677
           REI+VRD+NRFHHF+ G CSCGDYW
Sbjct: 604 REIIVRDLNRFHHFRDGCCSCGDYW 628

[Close]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match: gi|823203737|ref|XP_012436245.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Gossypium raimondii])

HSP 1 Score: 910.6 bits (2352), Expect = 1.6e-261
Identity = 442/665 (66.47%), Postives = 525/665 (78.95%), Query Frame = 1 

Query: 12  PNPNHILFRTLHSYSGSFHIDIAPPPSFPSFKCSISCLATLRNLLQPLSAPDLPPIRSYA 71
           P P   L  T+H +          P  FP         +TL  LLQP+S  + PP  SYA
Sbjct: 17  PQPQAFL-STIHPHIDPSQTKCTTPKPFPY-------TSTLPTLLQPISDQNPPPHLSYA 76

Query: 72  PVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAFYASSGDIDSSVSVFNRISEP 131
           P+FQFLTGQN LKLG Q+HAHM + GLQP A +G+KMVA YASSGD++S+V+VF +I +P
Sbjct: 77  PLFQFLTGQNFLKLGQQIHAHMTLHGLQPNAFLGAKMVAMYASSGDLESAVTVFRKIKDP 136

Query: 132 SSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTFPFVLKSCVDLLSVWMGKCVH 191
           +SLL+NS+IRAY   G+  + +  Y  MHS    G  FTFPFVLKSC ++L VWMG+CVH
Sbjct: 137 TSLLYNSIIRAYTNNGYPLKTIDIYREMHSLRLKGDNFTFPFVLKSCANVLDVWMGECVH 196

Query: 192 GLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPVRDVTAWNALLAGYMKSGCID 251
           G  LR GL+ D YV TSLID Y K GE+ DA KVFD M VR V++WNAL+AGYMK G I 
Sbjct: 197 GQSLRFGLELDAYVGTSLIDFYVKVGELRDANKVFDLMTVRAVSSWNALIAGYMKEGEIR 256

Query: 252 AAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEMIKEDSGVRPNWVTIMSVLPA 311
            A  +F  MPCRNIVSWT+MISGY+Q+GLA++ALSLFDEM+KEDS V+PNWVTIMSVLPA
Sbjct: 257 VAEDLFRGMPCRNIVSWTSMISGYTQNGLAEEALSLFDEMLKEDSEVKPNWVTIMSVLPA 316

Query: 312 CAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCGSLADARYCFDRLSRSEKILV 371
           CA S++ ERGR+I+E   R+GL SN SV  AL AMYAKCGSL  AR CFDR+  +EK L 
Sbjct: 317 CAHSASFERGRRINEYVNRIGLESNPSVQTALIAMYAKCGSLVSARCCFDRILENEKNLC 376

Query: 372 AWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDIGLKYFNYM 431
           AWNTMITAYAS+G GLE+VSTF  M++AG+ PD ITFTGLLSGCSHSG+V+ GL+YFN M
Sbjct: 377 AWNTMITAYASHGQGLESVSTFENMVRAGVYPDAITFTGLLSGCSHSGIVEFGLRYFNSM 436

Query: 432 SSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPAGPSIWGSLLAACRKHRNLEM 491
            + YS+ PR EHYACVVDLL RAGRL EA + + ++PM  GPSIWG+LLAACRK RNLE+
Sbjct: 437 QTKYSVEPRHEHYACVVDLLARAGRLVEAKEFIKKIPMQPGPSIWGALLAACRKSRNLEI 496

Query: 492 AEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAILKSQGTKKSPGCSWIEING 551
           AEIAA++LFVLEPEN+ NY+LLSNMYAEAG W+EVDKLRA LK +G KK+PGCSWIEI G
Sbjct: 497 AEIAAKELFVLEPENSCNYILLSNMYAEAGMWKEVDKLRARLKCEGIKKNPGCSWIEIKG 556

Query: 552 KAHMFLGGDRSHPQAKEIYIFLEALPEKMKAAGYVPDTSYVLHDISEEEKEFNLIAHSEK 611
           KAH+FL GD SHPQ+KEIY  LEALPEK+KAAGY+P+T +VLHDISEEEKE NLI HSEK
Sbjct: 557 KAHLFLSGDLSHPQSKEIYNLLEALPEKIKAAGYIPNTGFVLHDISEEEKEQNLIIHSEK 616

Query: 612 LAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIYGREIVVRDVNRFHHFKGGSCS 671
           LA+AFG+LNT+ E V+R+TKNLRICGDCHT + FIS+IY REIVVRDVNRFHHF+ G+CS
Sbjct: 617 LAIAFGLLNTNPEVVIRITKNLRICGDCHTVIKFISKIYEREIVVRDVNRFHHFRHGACS 673

Query: 672 CGDYW 677
           CGDYW
Sbjct: 677 CGDYW 673

[Close]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match: gi|658042725|ref|XP_008356987.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142 [Malus domestica])

HSP 1 Score: 906.7 bits (2342), Expect = 2.3e-260
Identity = 430/626 (68.69%), Postives = 517/626 (82.59%), Query Frame = 1 

Query: 52  LRNLLQPLSAPDLPPIRSYAPVFQFLTGQNLLKLGHQVHAHMLIRGLQPTALVGSKMVAF 111
           +R LL+PL A D   +  YAP+FQ LTG+NLLKLG QVHA M +RG +P A +G+KMVA 
Sbjct: 1   MRTLLKPLLAQDPRFVSFYAPIFQSLTGKNLLKLGQQVHAQMALRGFEPDAYLGAKMVAM 60

Query: 112 YASSGDIDSSVSVFNRISEPSSLLFNSMIRAYARYGFAERIVATYFNMHSWGFTGGYFTF 171
           YASS D+DS+V++F+R++ PS+LL+NS+IRAY  +GF+E  +  Y  MH  G     FT+
Sbjct: 61  YASSDDLDSAVAIFHRVNNPSTLLYNSIIRAYTLHGFSEETMEIYGRMHCLGLKXDNFTY 120

Query: 172 PFVLKSCVDLLSVWMGKCVHGLILRVGLQFDFYVATSLIDMYGKCGEINDAAKVFDNMPV 231
           PFVLK C +L  +W+GKCVHGL L+VGL+ D YV TSLI+MY KC +++DA ++FD M V
Sbjct: 121 PFVLKCCAELSRIWIGKCVHGLSLKVGLESDMYVGTSLINMYVKCCDMSDARRLFDKMTV 180

Query: 232 RDVTAWNALLAGYMKSGCIDAAVAIFERMPCRNIVSWTTMISGYSQSGLAQQALSLFDEM 291
           RDV++WNAL+AGYMK G I  A  +F +MP RNIVSWT MISGY+Q+GLA+QAL LFDEM
Sbjct: 181 RDVSSWNALIAGYMKDGEICLAEDLFGKMPGRNIVSWTAMISGYTQNGLAEQALFLFDEM 240

Query: 292 IKEDSGVRPNWVTIMSVLPACAQSSALERGRQIHELACRMGLISNASVLIALTAMYAKCG 351
           +K+DS V+PNWVTIMSVLPACA S+ALERGR+IH  A R+GL SN S+  AL AMYAKCG
Sbjct: 241 LKKDSKVKPNWVTIMSVLPACAHSAALERGRKIHNFASRIGLESNVSIQTALLAMYAKCG 300

Query: 352 SLADARYCFDRLSRSEKILVAWNTMITAYASYGHGLEAVSTFREMIQAGIQPDDITFTGL 411
           SL DAR CF+R+  ++  LVAWNTMITAYAS+G G EAVSTF +MI AG+QPD+ITFTGL
Sbjct: 301 SLLDARQCFERVRXTQNNLVAWNTMITAYASHGRGSEAVSTFEDMIVAGVQPDNITFTGL 360

Query: 412 LSGCSHSGLVDIGLKYFNYMSSTYSINPRAEHYACVVDLLGRAGRLAEASKLVDEMPMPA 471
           LSGCSHSGLVD+GLKYF+YM   YS+ P  EHYACVVDLLGRAGRLAEA  L+ +MPM A
Sbjct: 361 LSGCSHSGLVDVGLKYFDYMKRVYSVEPGVEHYACVVDLLGRAGRLAEAKDLIXKMPMQA 420

Query: 472 GPSIWGSLLAACRKHRNLEMAEIAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRA 531
           GPSIWG++L+ACRKH NLE+AEIAAR LF+LEPEN+GNYV+LSN+YAEAG W+EVD LR 
Sbjct: 421 GPSIWGAMLSACRKHHNLEIAEIAARSLFILEPENSGNYVMLSNIYAEAGMWKEVDNLRV 480

Query: 532 ILKSQGTKKSPGCSWIEINGKAHMFLGGDRSHPQAKEIYIF-LEALPEKMKAAGYVPDTS 591
           +LK+QG KK+PGCSW E+NGKAH+FLGGD SHPQAKEIY F L+ LP+K+KAAGYVPDTS
Sbjct: 481 LLKAQGVKKNPGCSWTEVNGKAHLFLGGDTSHPQAKEIYEFLLDELPKKIKAAGYVPDTS 540

Query: 592 YVLHDISEEEKEFNLIAHSEKLAVAFGILNTSAETVLRVTKNLRICGDCHTAMVFISEIY 651
           +VLHD+SEEEKE +L  HSEKLA+AFG+LNTS   VLRVTKNLRICGDCHTA   IS IY
Sbjct: 541 FVLHDVSEEEKEHSLTTHSEKLAIAFGLLNTSPGVVLRVTKNLRICGDCHTATKLISRIY 600

Query: 652 GREIVVRDVNRFHHFKGGSCSCGDYW 677
            REI+VRD+NRFHHFK G+CSCGDYW
Sbjct: 601 EREIIVRDLNRFHHFKDGNCSCGDYW 626

The following BLAST results are available for this feature:
BLAST of Lsi05G001780.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR53_ARATH3.0e-13837.66Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN... [more]
PP265_ARATH3.0e-13839.90Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
PP175_ARATH4.3e-13741.18Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP285_ARATH3.1e-13540.09Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
PP320_ARATH2.6e-13441.72Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
BLAST of Lsi05G001780.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEZ1_CUCSA0.0e+0089.99Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430650 PE=4 SV=1[more]
M5X3I7_PRUPE3.2e-26470.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002838mg PE=4 SV=1[more]
K4B1Y4_SOLLC6.0e-25567.68Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
W9QT12_9ROSA2.4e-25163.93Uncharacterized protein OS=Morus notabilis GN=L484_002732 PE=4 SV=1[more]
A0A0D2SZE2_GOSRA5.3e-25164.51Uncharacterized protein OS=Gossypium raimondii GN=B456_008G028200 PE=4 SV=1[more]
BLAST of Lsi05G001780.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20230.11.7e-13937.66 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G46790.11.7e-13939.90 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.12.4e-13841.18 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G57430.11.7e-13640.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G18750.11.5e-13541.72 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi05G001780.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445033|ref|XP_004140278.1|0.0e+0089.99PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis s... [more]
gi|659112126|ref|XP_008456075.1|0.0e+0090.13PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis m... [more]
gi|596016252|ref|XP_007218862.1|4.6e-26470.40hypothetical protein PRUPE_ppa002838mg [Prunus persica][more]
gi|823203737|ref|XP_012436245.1|1.6e-26166.47PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Gossypium... [more]
gi|658042725|ref|XP_008356987.1|2.3e-26068.69PREDICTED: putative pentatricopeptide repeat-containing protein At3g49142 [Malus... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi05G001780Lsi05G001780gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G001780.1.CDS.1Lsi05G001780.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi05G001780.1Lsi05G001780.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 136..164
score: 0.049coord: 207..232
score: 0.0019coord: 444..467
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 264..313
score: 1.1E-10coord: 371..416
score: 1.9
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 371..404
score: 3.0E-7coord: 266..301
score: 6.7E-7coord: 236..266
score: 2.0E-5coord: 207..233
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 66..100
score: 5.897coord: 369..403
score: 10.611coord: 233..263
score: 9.635coord: 336..366
score: 6.04coord: 202..232
score: 8.199coord: 132..166
score: 7.958coord: 264..298
score: 10.874coord: 404..434
score: 7.552coord: 506..540
score: 7.048coord: 440..474
score: 6.906coord: 301..335
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 233..404
score: 6.3E-7coord: 469..526
score: 4.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 343..526
score: 9.11E-7coord: 217..304
score: 9.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 64..547
score:
NoneNo IPR availablePANTHERPTHR24015:SF728SUBFAMILY NOT NAMEDcoord: 64..547
score: