Lsi04G019790.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G019790.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	BED zinc finger,hAT family dimerization domain
Location	chr04 : 26848631 .. 26851000 (-)
Sequence length	1480

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTAAGCTATTTGCACTGACATTTGATGATTTTTCAACCAATGACGAGATAATCAGAAGAATTAAAGAACACATATCGAAGAAAAGGCCTCTTTTGAGTAACGGTAGACTATTTGACGTATGCTCTGCTGCACATACCATAAATGCGATCGCTGAAGACGTGATAGAAGCGATGCGAGAGGTTAACCAAAAGATCCGAGGGAGTTTTAAATATATCAGAAGTTCACAACTCACTCAAGGGAGGTTCAATGAGATGGCTCATCAAGTAGGGATCACCAGTCAGAAGATATTGGTCCCTGACAGTCCTGGTCAATGGAATTCAACATATTTCATGCTCGAGACAGCCGTGGAATACAAGGGTGCATTTAATCTTCTACAAAAGCATGATCCTCATTATGCATCAGCTCTTACTGCTTTAGAGTGGGAATGGACAACTAGTGTTGCTGACTATTTGAAACTTTTTGTTGAAATAGTAAACATCTTCTCTGGCAACAAATCTACTACAGCAAATATATATTTTCCTGAGATATGCGATGTTCACATTCAATTAATCGAGTGGTGTAAGAGCTCAGATAATTTTCTCAACTCCCTTGCATCGAAAATAAAGGCCAAGTTTGATAAATATTGGAGCAAATGCAGTCTGGCTTTGGCAGTTGCTGCAGTTCTAGATCCAAGGTTCAAAATGAAATTGGTCGAGTACTACTATTCGCAGATTTACGGTAGTACGGCCTTGGATCGTATTAAGGAAGTTTCTGATGGTATCAAGGAACTTTATGATGCATATTCAATCTGCTTTACAATGGTTGATCAAGGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGGTATGTGCATAATGGATTCTACCTAATATGTTTTTTCTTCTTTTACTTACAACTGTTTATTTTTTTTCGTTTCATATCAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAACTGTACAAATAGGTGCCTGGTGTCATGTAAATATCTTACTGAATATCTACCTCACTCCATTGTTTTGTTTTTTTATAATGTTAGGTTGATGGATCTGTTAGTTTATACTATAATGGATTCTGATTGTTTTTGAGGCCATAGCCTTGTCCAAGTGAGCCATGCTGTACATAATGAAATTCTGTTTCTTCTGAATGTCTGTCTATAAATCAGACAATGGGCAAAATTTGTATGTTTTTGCTGGTAATAAGAATTGTAAATATTCAGATCA

mRNA sequence

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAACTGTACAAATAGGTGCCTGGTGTCATGTAAATATCTTACTGAATATCTACCTCACTCCATTGTTTTGTTTTTTTATAATGTTAGGTTGATGGATCTGTTAGTTTATACTATAATGGATTCTGATTGTTTTTGAGGCCATAGCCTTGTCCAAGTGAGCCATGCTGTACATAATGAAATTCTGTTTCTTCTGAATGTCTGTCTATAAATCAGACAATGGGCAAAATTTGTATGTTTTTGCTGGTAATAAGAATTGTAAATATTCAGATCA

Coding sequence (CDS)

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAA

Protein sequence

MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLSDVIIKCLMDWDIDCSALRGSSLPGTSNDSRDRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDVIGTPMSSIAPELAFSTRGRVLDRCRSSLSPDTRQALICAQDWLRIELEDPRPLSTASYIPLLLGTN

Homology

[Close]

BLAST of Lsi04G019790.1 vs. Swiss-Prot
Match: RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-33
Identity = 85/252 (33.73%), Postives = 131/252 (51.98%), Query Frame = 1


Query: 13  KRLTSVVWNHF--ERVR--KADICYAVCVHCNKKLSGSSNSGTTHLRNHLM--RCLKRSN 72
           +R  S+VW HF  E V       C  +C       SGS  +GT+HL+ H+    C K  N
Sbjct: 65  RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKN 124

Query: 73  YDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQ 132
            +   LL       +   G                       P +RR      A++ FDQ
Sbjct: 125 QEHKLLLTPAGGTDNDGEGTVE-------------------RPSKRRYRYTGYANAAFDQ 184

Query: 133 ERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKI 192
           ERS + LA MIILH YPL IV+   F  F+ ++QP F V+   T+E     +YQKEKE +
Sbjct: 185 ERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENL 244

Query: 193 FETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLS 252
            +  N + GRI++++ +W++S+ + Y+ LA  +ID +WK+ +++LNF+ + S H+E+ LS
Sbjct: 245 MQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALS 297

Query: 253 DVIIKCLMDWDI 259
           + I   L DW++
Sbjct: 305 EAISTSLSDWNM 297

[Close]

BLAST of Lsi04G019790.1 vs. Swiss-Prot
Match: RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.5e-33
Identity = 84/252 (33.33%), Postives = 135/252 (53.57%), Query Frame = 1


Query: 13  KRLTSVVWNHFE-RVRKADICYAVCVHCNKKLS---GSSNSGTTHLRNH--LMRCLKRSN 72
           +R  SVVW HF        +  A C  C +  +   GS  SGT+HL+ H  L  C    N
Sbjct: 105 RRKKSVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKN 164

Query: 73  YDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQ 132
            D+   L    +  +   G A     E   K  ++S                 A++ FDQ
Sbjct: 165 EDMKLSLPLATVTNNDGEGCA-----ERVAKRHYRST--------------GYANAMFDQ 224

Query: 133 ERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKI 192
           +R+ ++LA MIILH YPL IVE  GF  F+ ++QP F V+   T+E     +YQKE+E +
Sbjct: 225 DRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENL 284

Query: 193 FETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLS 252
               + + GRI+++V +W++S+ + Y+ LAA +ID +W++ ++++NF+ + S H+E+ LS
Sbjct: 285 MHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLS 337

Query: 253 DVIIKCLMDWDI 259
           + I   L DW++
Sbjct: 345 EAISTSLSDWNM 337

[Close]

BLAST of Lsi04G019790.1 vs. Swiss-Prot
Match: RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.2e-31
Identity = 86/263 (32.70%), Postives = 139/263 (52.85%), Query Frame = 1


Query: 2   EMSNDSSIKKPKRLTSVVWNHF--ERVR--KADICYAVCVHCNKKLSGSSNSGTTHLRNH 61
           EMS   + ++ +R  S+VW HF  E V       C  +C       SGS  +GT+HL+ H
Sbjct: 55  EMSTPPTSRR-RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRH 114

Query: 62  LM--RCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDE 121
           +    C    N +        +L    + G  N      +R            P +RR  
Sbjct: 115 ITLGSCPIIKNQE-------HKLALTPAVGTDNDGEGTVER------------PSKRRYR 174

Query: 122 VVTIASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSC 181
               A++ FDQ+RS + LA MIILH YPL IV+   F  F+ ++QP F V+   T+E   
Sbjct: 175 YTGYANAAFDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEGEV 234

Query: 182 MEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVT 241
             +YQKEKE + +  + + GRI++++ +W++S+ + Y+ LA  +ID +WK+ +++LNF+ 
Sbjct: 235 YAVYQKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMM 294

Query: 242 LDSSHTEDMLSDVIIKCLMDWDI 259
           + S H+E+ LS+ I   L DW++
Sbjct: 295 VSSPHSENALSEAISTSLSDWNM 297

[Close]

BLAST of Lsi04G019790.1 vs. Swiss-Prot
Match: DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana GN=HAT PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.3e-27
Identity = 76/272 (27.94%), Postives = 136/272 (50.00%), Query Frame = 1


Query: 1   MEMSNDSSIKKP-------KRLTSVVWNHFERVRKADICY-AVCVHCNKKLS---GSSNS 60
           +E+ ND+ +  P       ++  S+VW HF        C  A C  CN+  +   G+  +
Sbjct: 45  LEVYNDTEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVA 104

Query: 61  GTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDP 120
           GT+HL+ H+ +             A      + ++ L +  +              K D 
Sbjct: 105 GTSHLKRHIFK---------GTCPALIHTHDNDNNPLMSTPYTP------------KTDT 164

Query: 121 DQRRDEVVTIASS--KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLP 180
            +RR      AS    F+Q++ + ++A MII+H YPL +V+H GF  FV++IQP F+ + 
Sbjct: 165 PRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVS 224

Query: 181 NSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQ 240
            + V+  C+  Y  EK+ + +++  + GR  ++++ W+S   + Y+ + AHYID DWK+Q
Sbjct: 225 FNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQ 284

Query: 241 KKLLNFVTLDSSHTEDMLSDVIIKCLMDWDID 260
           KKLLN +       ++ LS  +  C+ +W ++
Sbjct: 285 KKLLNVLMESYPEADEALSLAVANCVSEWGLE 295

[Close]

BLAST of Lsi04G019790.1 vs. Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-24
Identity = 76/268 (28.36%), Postives = 128/268 (47.76%), Query Frame = 1


Query: 2   EMSNDSSIKKPKRLTSVVWNHFERV--------RKADICYAVC--VHCNKKLSGSSNSGT 61
           E   ++  K+ K+ TS VW HF +         +K    +  C   +C  K     + GT
Sbjct: 126 EPEEEAPQKRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGT 185

Query: 62  THLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQ 121
           +  RNHL     R+++                      S  +GQ         +K + D 
Sbjct: 186 SGFRNHL-----RTSH----------------------SLVKGQ-------LCLKSEKDH 245

Query: 122 RRDEVVTIASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTV 181
            +D +  I   K+D+  S   L   II+H YP +IVEH  F  FVK+++P F +    T 
Sbjct: 246 GKD-INLIEPYKYDEVVSLKKLHLAIIMHEYPFNIVEHEYFVEFVKSLRPHFPIKSRVTA 305

Query: 182 EVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLL 241
               M++Y +EKEK++  +  +Q R + +++MW+S +N  Y+C+  H+ID+DW LQK+++
Sbjct: 306 RKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIV 358

Query: 242 NFVTLDSSHTEDMLSDVIIKCLMDWDID 260
            F  ++  HT   LS      ++ W+I+
Sbjct: 366 GFFHVEGRHTGQRLSQTFTAIMVKWNIE 358

[Close]

BLAST of Lsi04G019790.1 vs. TrEMBL
Match: A0A0A0L1Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G624400 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 4.7e-138
Identity = 247/260 (95.00%), Postives = 253/260 (97.31%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSS+KKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 199 MEMSNDSSVKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 258

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 259 CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 318

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 319 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVEISCMEIYQ 378

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEK KIFE INRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 379 KEKLKIFEIINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 438

Query: 241 TEDMLSDVIIKCLMDWDIDC 261
           TEDMLSDVIIKCL+DW IDC
Sbjct: 439 TEDMLSDVIIKCLVDWGIDC 458

[Close]

BLAST of Lsi04G019790.1 vs. TrEMBL
Match: A0A067KRK2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11935 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.0e-120
Identity = 207/262 (79.01%), Postives = 248/262 (94.66%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SN+S+IKKPKRLTSVVWNHFER+RKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVSNESAIKKPKRLTSVVWNHFERIRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF--KSAIVKYDPDQRRDEVVT 120
           CLKRSN+DVSQLLAAKR KK++S  L +IS+DEGQRKDE+   +AI+KYD +QR+DEV++
Sbjct: 61  CLKRSNFDVSQLLAAKRRKKETSLSLPSISYDEGQRKDEYIKPTAIIKYDQEQRKDEVIS 120

Query: 121 IASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEI 180
           + SS+FDQERSQ DLA MIILHGYPL++V+HVGFK+FVKN+QPLFEV+PN ++E+SC+EI
Sbjct: 121 LGSSRFDQERSQLDLARMIILHGYPLAMVDHVGFKIFVKNLQPLFEVVPNGSIELSCVEI 180

Query: 181 YQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDS 240
           Y +EK++++E INRLQGRIN+S+EMWSS+ENI+YLCLAAHYIDEDWKLQKK+LNFVTLDS
Sbjct: 181 YGREKQRVYEMINRLQGRINLSIEMWSSAENIEYLCLAAHYIDEDWKLQKKILNFVTLDS 240

Query: 241 SHTEDMLSDVIIKCLMDWDIDC 261
           SHTEDMLS+VIIKCLM+WDI+C
Sbjct: 241 SHTEDMLSEVIIKCLMEWDIEC 262

[Close]

BLAST of Lsi04G019790.1 vs. TrEMBL
Match: A0A061F9X6_THECC (BED zinc finger,hAT family dimerization domain isoform 5 OS=Theobroma cacao GN=TCM_032128 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.6e-117
Identity = 202/261 (77.39%), Postives = 243/261 (93.10%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME++N+S+IKKPKRLTSVVWNHFERVRKAD+CYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVANESAIKKPKRLTSVVWNHFERVRKADVCYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF-KSAIVKYDPDQRRDEVVTI 120
           CLKRSNYDVSQLLAAKR KKD++  +ANIS+DEGQRK+++ K  IVKY+ DQR+DEV  +
Sbjct: 61  CLKRSNYDVSQLLAAKRRKKDNTLTIANISYDEGQRKEDYIKPTIVKYEQDQRKDEVFNL 120

Query: 121 ASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIY 180
            SS+FDQERS+ DLA MIILHGYPL++VEHVGFKVFVKN+QPLF+++PNST+E+ CMEIY
Sbjct: 121 GSSRFDQERSRLDLARMIILHGYPLAMVEHVGFKVFVKNLQPLFDLVPNSTIELFCMEIY 180

Query: 181 QKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSS 240
            KEK+K+++ +++LQGRIN++VEMWSS EN +YLCL AHYID+DWKLQKK+LNFVTLDSS
Sbjct: 181 GKEKQKVYDMLSKLQGRINLAVEMWSSPENSNYLCLTAHYIDDDWKLQKKILNFVTLDSS 240

Query: 241 HTEDMLSDVIIKCLMDWDIDC 261
           HTED+LS+VI+KCLMDWDI+C
Sbjct: 241 HTEDLLSEVIMKCLMDWDIEC 261

[Close]

BLAST of Lsi04G019790.1 vs. TrEMBL
Match: A0A061F830_THECC (BED zinc finger,hAT family dimerization domain isoform 1 OS=Theobroma cacao GN=TCM_032128 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.6e-117
Identity = 202/261 (77.39%), Postives = 243/261 (93.10%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME++N+S+IKKPKRLTSVVWNHFERVRKAD+CYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVANESAIKKPKRLTSVVWNHFERVRKADVCYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF-KSAIVKYDPDQRRDEVVTI 120
           CLKRSNYDVSQLLAAKR KKD++  +ANIS+DEGQRK+++ K  IVKY+ DQR+DEV  +
Sbjct: 61  CLKRSNYDVSQLLAAKRRKKDNTLTIANISYDEGQRKEDYIKPTIVKYEQDQRKDEVFNL 120

Query: 121 ASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIY 180
            SS+FDQERS+ DLA MIILHGYPL++VEHVGFKVFVKN+QPLF+++PNST+E+ CMEIY
Sbjct: 121 GSSRFDQERSRLDLARMIILHGYPLAMVEHVGFKVFVKNLQPLFDLVPNSTIELFCMEIY 180

Query: 181 QKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSS 240
            KEK+K+++ +++LQGRIN++VEMWSS EN +YLCL AHYID+DWKLQKK+LNFVTLDSS
Sbjct: 181 GKEKQKVYDMLSKLQGRINLAVEMWSSPENSNYLCLTAHYIDDDWKLQKKILNFVTLDSS 240

Query: 241 HTEDMLSDVIIKCLMDWDIDC 261
           HTED+LS+VI+KCLMDWDI+C
Sbjct: 241 HTEDLLSEVIMKCLMDWDIEC 261

[Close]

BLAST of Lsi04G019790.1 vs. TrEMBL
Match: A0A061F9F6_THECC (BED zinc finger,hAT family dimerization domain isoform 4 OS=Theobroma cacao GN=TCM_032128 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.6e-117
Identity = 202/261 (77.39%), Postives = 243/261 (93.10%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME++N+S+IKKPKRLTSVVWNHFERVRKAD+CYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVANESAIKKPKRLTSVVWNHFERVRKADVCYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF-KSAIVKYDPDQRRDEVVTI 120
           CLKRSNYDVSQLLAAKR KKD++  +ANIS+DEGQRK+++ K  IVKY+ DQR+DEV  +
Sbjct: 61  CLKRSNYDVSQLLAAKRRKKDNTLTIANISYDEGQRKEDYIKPTIVKYEQDQRKDEVFNL 120

Query: 121 ASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIY 180
            SS+FDQERS+ DLA MIILHGYPL++VEHVGFKVFVKN+QPLF+++PNST+E+ CMEIY
Sbjct: 121 GSSRFDQERSRLDLARMIILHGYPLAMVEHVGFKVFVKNLQPLFDLVPNSTIELFCMEIY 180

Query: 181 QKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSS 240
            KEK+K+++ +++LQGRIN++VEMWSS EN +YLCL AHYID+DWKLQKK+LNFVTLDSS
Sbjct: 181 GKEKQKVYDMLSKLQGRINLAVEMWSSPENSNYLCLTAHYIDDDWKLQKKILNFVTLDSS 240

Query: 241 HTEDMLSDVIIKCLMDWDIDC 261
           HTED+LS+VI+KCLMDWDI+C
Sbjct: 241 HTEDLLSEVIMKCLMDWDIEC 261

[Close]

BLAST of Lsi04G019790.1 vs. TAIR10
Match: AT3G42170.1 (AT3G42170.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-28
Identity = 76/272 (27.94%), Postives = 136/272 (50.00%), Query Frame = 1


Query: 1   MEMSNDSSIKKP-------KRLTSVVWNHFERVRKADICY-AVCVHCNKKLS---GSSNS 60
           +E+ ND+ +  P       ++  S+VW HF        C  A C  CN+  +   G+  +
Sbjct: 45  LEVYNDTEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVA 104

Query: 61  GTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDP 120
           GT+HL+ H+ +             A      + ++ L +  +              K D 
Sbjct: 105 GTSHLKRHIFK---------GTCPALIHTHDNDNNPLMSTPYTP------------KTDT 164

Query: 121 DQRRDEVVTIASS--KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLP 180
            +RR      AS    F+Q++ + ++A MII+H YPL +V+H GF  FV++IQP F+ + 
Sbjct: 165 PRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVS 224

Query: 181 NSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQ 240
            + V+  C+  Y  EK+ + +++  + GR  ++++ W+S   + Y+ + AHYID DWK+Q
Sbjct: 225 FNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQ 284

Query: 241 KKLLNFVTLDSSHTEDMLSDVIIKCLMDWDID 260
           KKLLN +       ++ LS  +  C+ +W ++
Sbjct: 285 KKLLNVLMESYPEADEALSLAVANCVSEWGLE 295

[Close]

BLAST of Lsi04G019790.1 vs. TAIR10
Match: AT1G18560.1 (AT1G18560.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-14
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 1


Query: 290 SQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDVIGTPMSSIAPEL 349
           S   +V+ +L +YL E + P   D  +L+WWKV++ RYP LS MARD +    +S APE 
Sbjct: 561 SMSNNVVDELTQYLSESIVPMQTD--VLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEE 620

Query: 350 AFSTRGRVLDRCRSSLSPDTRQALICAQDWLRIELEDPRPLSTASYIPLL 400
            F  +G  +D+ +  +  D+ Q++IC + W+   ++     S   Y  L+
Sbjct: 621 IFCGKGEEIDKQKYCMPHDSTQSVICIRSWIEAGMKLKYKCSEIDYERLM 668

[Close]

BLAST of Lsi04G019790.1 vs. NCBI nr
Match: gi|778695647|ref|XP_011654029.1| (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis sativus])

HSP 1 Score: 499.2 bits (1284), Expect = 6.7e-138
Identity = 247/260 (95.00%), Postives = 253/260 (97.31%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSS+KKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEMSNDSSVKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 121 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVEISCMEIYQ 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEK KIFE INRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKLKIFEIINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC 261
           TEDMLSDVIIKCL+DW IDC
Sbjct: 241 TEDMLSDVIIKCLVDWGIDC 260

[Close]

BLAST of Lsi04G019790.1 vs. NCBI nr
Match: gi|700199876|gb|KGN55034.1| (hypothetical protein Csa_4G624400 [Cucumis sativus])

HSP 1 Score: 499.2 bits (1284), Expect = 6.7e-138
Identity = 247/260 (95.00%), Postives = 253/260 (97.31%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSS+KKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 199 MEMSNDSSVKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 258

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 259 CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 318

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 319 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVEISCMEIYQ 378

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEK KIFE INRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 379 KEKLKIFEIINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 438

Query: 241 TEDMLSDVIIKCLMDWDIDC 261
           TEDMLSDVIIKCL+DW IDC
Sbjct: 439 TEDMLSDVIIKCLVDWGIDC 458

[Close]

BLAST of Lsi04G019790.1 vs. NCBI nr
Match: gi|802621689|ref|XP_012076092.1| (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Jatropha curcas])

HSP 1 Score: 440.7 bits (1132), Expect = 2.8e-120
Identity = 207/262 (79.01%), Postives = 248/262 (94.66%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SN+S+IKKPKRLTSVVWNHFER+RKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVSNESAIKKPKRLTSVVWNHFERIRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF--KSAIVKYDPDQRRDEVVT 120
           CLKRSN+DVSQLLAAKR KK++S  L +IS+DEGQRKDE+   +AI+KYD +QR+DEV++
Sbjct: 61  CLKRSNFDVSQLLAAKRRKKETSLSLPSISYDEGQRKDEYIKPTAIIKYDQEQRKDEVIS 120

Query: 121 IASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEI 180
           + SS+FDQERSQ DLA MIILHGYPL++V+HVGFK+FVKN+QPLFEV+PN ++E+SC+EI
Sbjct: 121 LGSSRFDQERSQLDLARMIILHGYPLAMVDHVGFKIFVKNLQPLFEVVPNGSIELSCVEI 180

Query: 181 YQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDS 240
           Y +EK++++E INRLQGRIN+S+EMWSS+ENI+YLCLAAHYIDEDWKLQKK+LNFVTLDS
Sbjct: 181 YGREKQRVYEMINRLQGRINLSIEMWSSAENIEYLCLAAHYIDEDWKLQKKILNFVTLDS 240

Query: 241 SHTEDMLSDVIIKCLMDWDIDC 261
           SHTEDMLS+VIIKCLM+WDI+C
Sbjct: 241 SHTEDMLSEVIIKCLMEWDIEC 262

[Close]

BLAST of Lsi04G019790.1 vs. NCBI nr
Match: gi|590611085|ref|XP_007022001.1| (BED zinc finger,hAT family dimerization domain isoform 4 [Theobroma cacao])

HSP 1 Score: 429.5 bits (1103), Expect = 6.5e-117
Identity = 202/261 (77.39%), Postives = 243/261 (93.10%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME++N+S+IKKPKRLTSVVWNHFERVRKAD+CYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVANESAIKKPKRLTSVVWNHFERVRKADVCYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF-KSAIVKYDPDQRRDEVVTI 120
           CLKRSNYDVSQLLAAKR KKD++  +ANIS+DEGQRK+++ K  IVKY+ DQR+DEV  +
Sbjct: 61  CLKRSNYDVSQLLAAKRRKKDNTLTIANISYDEGQRKEDYIKPTIVKYEQDQRKDEVFNL 120

Query: 121 ASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIY 180
            SS+FDQERS+ DLA MIILHGYPL++VEHVGFKVFVKN+QPLF+++PNST+E+ CMEIY
Sbjct: 121 GSSRFDQERSRLDLARMIILHGYPLAMVEHVGFKVFVKNLQPLFDLVPNSTIELFCMEIY 180

Query: 181 QKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSS 240
            KEK+K+++ +++LQGRIN++VEMWSS EN +YLCL AHYID+DWKLQKK+LNFVTLDSS
Sbjct: 181 GKEKQKVYDMLSKLQGRINLAVEMWSSPENSNYLCLTAHYIDDDWKLQKKILNFVTLDSS 240

Query: 241 HTEDMLSDVIIKCLMDWDIDC 261
           HTED+LS+VI+KCLMDWDI+C
Sbjct: 241 HTEDLLSEVIMKCLMDWDIEC 261

[Close]

BLAST of Lsi04G019790.1 vs. NCBI nr
Match: gi|590611089|ref|XP_007022002.1| (BED zinc finger,hAT family dimerization domain isoform 5 [Theobroma cacao])

HSP 1 Score: 429.5 bits (1103), Expect = 6.5e-117
Identity = 202/261 (77.39%), Postives = 243/261 (93.10%), Query Frame = 1


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME++N+S+IKKPKRLTSVVWNHFERVRKAD+CYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEVANESAIKKPKRLTSVVWNHFERVRKADVCYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEF-KSAIVKYDPDQRRDEVVTI 120
           CLKRSNYDVSQLLAAKR KKD++  +ANIS+DEGQRK+++ K  IVKY+ DQR+DEV  +
Sbjct: 61  CLKRSNYDVSQLLAAKRRKKDNTLTIANISYDEGQRKEDYIKPTIVKYEQDQRKDEVFNL 120

Query: 121 ASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIY 180
            SS+FDQERS+ DLA MIILHGYPL++VEHVGFKVFVKN+QPLF+++PNST+E+ CMEIY
Sbjct: 121 GSSRFDQERSRLDLARMIILHGYPLAMVEHVGFKVFVKNLQPLFDLVPNSTIELFCMEIY 180

Query: 181 QKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSS 240
            KEK+K+++ +++LQGRIN++VEMWSS EN +YLCL AHYID+DWKLQKK+LNFVTLDSS
Sbjct: 181 GKEKQKVYDMLSKLQGRINLAVEMWSSPENSNYLCLTAHYIDDDWKLQKKILNFVTLDSS 240

Query: 241 HTEDMLSDVIIKCLMDWDIDC 261
           HTED+LS+VI+KCLMDWDI+C
Sbjct: 241 HTEDLLSEVIMKCLMDWDIEC 261

The following BLAST results are available for this feature:

BLAST of Lsi04G019790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RSLE1_ORYSJ	2.0e-33	33.73	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
RSLE3_ORYSJ	4.5e-33	33.33	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
RSLE2_ORYSJ	3.2e-31	32.70	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
DSLE_ARATH	6.3e-27	27.94	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana GN=...	[more]
TRA1_MAIZE	1.3e-24	28.36	Putative AC transposase OS=Zea mays PE=2 SV=2	[more]

BLAST of Lsi04G019790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1Z7_CUCSA	4.7e-138	95.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G624400 PE=4 SV=1	[more]
A0A067KRK2_JATCU	2.0e-120	79.01	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11935 PE=4 SV=1	[more]
A0A061F9X6_THECC	4.6e-117	77.39	BED zinc finger,hAT family dimerization domain isoform 5 OS=Theobroma cacao GN=T...	[more]
A0A061F830_THECC	4.6e-117	77.39	BED zinc finger,hAT family dimerization domain isoform 1 OS=Theobroma cacao GN=T...	[more]
A0A061F9F6_THECC	4.6e-117	77.39	BED zinc finger,hAT family dimerization domain isoform 4 OS=Theobroma cacao GN=T...	[more]

BLAST of Lsi04G019790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G42170.1	3.5e-28	27.94	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	3.8e-14	33.64	BED zinc finger ;hAT family dimerisation domain	[more]

BLAST of Lsi04G019790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695647\|ref\|XP_011654029.1\|	6.7e-138	95.00	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis...	[more]
gi\|700199876\|gb\|KGN55034.1\|	6.7e-138	95.00	hypothetical protein Csa_4G624400 [Cucumis sativus]	[more]
gi\|802621689\|ref\|XP_012076092.1\|	2.8e-120	79.01	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Jatroph...	[more]
gi\|590611085\|ref\|XP_007022001.1\|	6.5e-117	77.39	BED zinc finger,hAT family dimerization domain isoform 4 [Theobroma cacao]	[more]
gi\|590611089\|ref\|XP_007022002.1\|	6.5e-117	77.39	BED zinc finger,hAT family dimerization domain isoform 5 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR008906	HATC_C_dom
IPR003656	Znf_BED

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi04G019790	Lsi04G019790	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G019790.1.three_prime_UTR.1	Lsi04G019790.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G019790.1.CDS.3	Lsi04G019790.1.CDS.3	CDS
Lsi04G019790.1.CDS.2	Lsi04G019790.1.CDS.2	CDS
Lsi04G019790.1.CDS.1	Lsi04G019790.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi04G019790.1	Lsi04G019790.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003656	Zinc finger, BED-type	PFAM	PF02892	zf-BED	coord: 17..61 score: 4.
IPR003656	Zinc finger, BED-type	SMART	SM00614	bed5	coord: 14..64 score: 1.2
IPR003656	Zinc finger, BED-type	PROFILE	PS50808	ZF_BED	coord: 14..69 score: 11
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 298..380 score: 9.2
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 184..260 score: 1.74E-10coord: 279..382 score: 1.29
None	No IPR available	unknown	Coil	Coil	coord: 176..196 scor
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 120..399 score: 1.9E-238coord: 1..92 score: 1.9E
None	No IPR available	PANTHER	PTHR23272:SF13	SUBFAMILY NOT NAMED	coord: 1..92 score: 1.9E-238coord: 120..399 score: 1.9E
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 17..64 score: 3.4