Lsi04G019650.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G019650.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Glucan endo-1,3-beta-glucosidase
Location	chr04 : 26722912 .. 26723545 (-)
Sequence length	433

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATTCCATCTCCCTCCTATAAATTCCTCCTTCATCTTCTTCCTTTTCAGATCTCTTCCACTTCCTTCAATAATTCCCTCTGATCGCAGCACAACAGAGTACTATCAATGGCAAAAGCGGCCACTCTCTCCTTTTTGCTTCTATTCCTTTCGTTCCTTTCAGGTAAAATTTCTCCACATCTTTTCAAATTCCGCCAAGTTTTCAAATAATTACTGAACAATTTGATCTTCTTCCGATCGATTTCTTCTTCAGGACGAGATTTGCTGGCAGTAAATGCACAGGTGAAATCATCGTTATTATGCAATTAGGGTTTACACAAACAATCATAATAATTCTCTGAAAACTGAATTCGAATTCTTCTTTTTCTTTTTTGTGCGATGAATAATTTGCAGAAAACGTGGTGCATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTGGCGAATACCAATTACGCTTGTGCTCAGGTAGATTGCAAAATAATGCAACAAGGAAACCCCTGCTTTTATCCTGATAATTTGTTCAACCATGCTGCCATAGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAACTGTGACTTTAGAGGCTCTGGTCTCGTAGTCACCACTGATCCAAGTTAG

mRNA sequence

ATTCATTCCATCTCCCTCCTATAAATTCCTCCTTCATCTTCTTCCTTTTCAGATCTCTTCCACTTCCTTCAATAATTCCCTCTGATCGCAGCACAACAGAGTACTATCAATGGCAAAAGCGGCCACTCTCTCCTTTTTGCTTCTATTCCTTTCGTTCCTTTCAGGACGAGATTTGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTGGCGAATACCAATTACGCTTGTGCTCAGGTAGATTGCAAAATAATGCAACAAGGAAACCCCTGCTTTTATCCTGATAATTTGTTCAACCATGCTGCCATAGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAACTGTGACTTTAGAGGCTCTGGTCTCGTAGTCACCACTGATCCAAGTTAG

Coding sequence (CDS)

ATGGCAAAAGCGGCCACTCTCTCCTTTTTGCTTCTATTCCTTTCGTTCCTTTCAGGACGAGATTTGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTGGCGAATACCAATTACGCTTGTGCTCAGGTAGATTGCAAAATAATGCAACAAGGAAACCCCTGCTTTTATCCTGATAATTTGTTCAACCATGCTGCCATAGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAACTGTGACTTTAGAGGCTCTGGTCTCGTAGTCACCACTGATCCAAGTTAG

Protein sequence

MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS

Homology

[Close]

BLAST of Lsi04G019650.1 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 27  AQKTWCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNS 86
           A  +WC+PKP      L  N NYAC Q +DC  +Q G  CF P+ +  HAA  M+LYY S
Sbjct: 368 AAGSWCVPKPGVSDDQLTGNINYACGQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQS 427

Query: 87  KGKNQWNCDFRGSGLVVTTDPS 108
            G+N WNCDF  +  +  T+PS
Sbjct: 428 AGRNSWNCDFSQTATLTNTNPS 449

[Close]

BLAST of Lsi04G019650.1 vs. Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-16
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 1


Query: 31  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQ 90
           WC+ K  ++   L  N NYAC  VDCK +Q G  CF P++L  HA+  M+ YY + G   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTD 436

Query: 91  WNCDFRGSGLVVTTDPS 108
             CDF+G+G+V ++DPS
Sbjct: 437 LACDFKGTGIVTSSDPS 453

[Close]

BLAST of Lsi04G019650.1 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 29  KTWCIPKPSSDQATLLANTNYACAQ--VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSK 88
           K WC+PK  +  A L +N +Y C+Q  +DC  +Q    CF P+ +  HA+ AM+ +Y SK
Sbjct: 35  KKWCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSK 94

Query: 89  GKNQWNCDFRGSGLVVTTDPS 108
           G+N ++CDF G+G + ++DPS
Sbjct: 95  GRNDFDCDFSGTGAITSSDPS 115

[Close]

BLAST of Lsi04G019650.1 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-12
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 1


Query: 12  LFLSFLSGRDLLAVN--AQKTWCIPKPSSDQATLLANTNYACA--QVDCKIMQQGNPCFY 71
           ++L  +SG      N    +T+CI     D  TL A  ++AC   + +C  +Q G  C+ 
Sbjct: 360 VYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQ 419

Query: 72  PDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           P+N+  HA+ A + YY  +G+   +CDF+G  ++ TTDPS
Sbjct: 420 PNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPS 459

[Close]

BLAST of Lsi04G019650.1 vs. Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 5.8e-12
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 1


Query: 31  WCIPKPSSDQATLLANTNYACAQ-VDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKN 90
           WC+PK  +    L A+ ++AC   +DC  +Q G  CF P+N+ +HAA AM++Y+    K 
Sbjct: 364 WCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQ 423

Query: 91  QWNCDFRGSGLVVTTDPS 108
             +CDF  +  V + +PS
Sbjct: 424 PTDCDFSKTATVTSQNPS 441

[Close]

BLAST of Lsi04G019650.1 vs. TrEMBL
Match: A0A0A0L4I1_CUCSA (Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus GN=Csa_4G622750 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-46
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 1


Query: 1   MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSGL+V TDPS
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPS 108

[Close]

BLAST of Lsi04G019650.1 vs. TrEMBL
Match: V4T5M7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022921mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.0e-39
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQ 60
           MA  A L   LL LSF SG +LL VN QKTWC+ KPSSDQA LLAN NYAC+Q+DC+I+Q
Sbjct: 1   MAPKAALYLFLLLLSFTSGGNLLVVNGQKTWCVAKPSSDQAALLANINYACSQIDCRILQ 60

Query: 61  QGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +G PCFYPDNL NHA+I+M+LYY +KG+N+WNCDFR S L+VTTDPS
Sbjct: 61  KGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPS 107

[Close]

BLAST of Lsi04G019650.1 vs. TrEMBL
Match: A0A061FGN1_THECC (Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao GN=TCM_032235 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.0e-39
Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQ 60
           MAK A  S LLL +SF SG  L+ VN QK+WC+ KPSSDQATLLAN NYAC+QVDC+++Q
Sbjct: 1   MAKVAAFSLLLLLVSFTSGGTLMMVNGQKSWCVAKPSSDQATLLANINYACSQVDCRVLQ 60

Query: 61  QGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +G PCF PDNL NHA+IAM+LYY +KG+N+WNCDFR SGLVV TDPS
Sbjct: 61  RGCPCFTPDNLMNHASIAMNLYYQAKGRNRWNCDFRSSGLVVITDPS 107

[Close]

BLAST of Lsi04G019650.1 vs. TrEMBL
Match: A0A059BP19_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01381 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.5e-38
Identity = 76/108 (70.37%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 1   MAKAA-TLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAK A +L FLLL L+F SG  +  VN QKTWC+ KPSSDQATLLAN NY+C+QVDCKI+
Sbjct: 1   MAKVAFSLIFLLLSLAFGSGAPVTVVNGQKTWCVAKPSSDQATLLANINYSCSQVDCKIL 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q+G PCFYPD+L NHA++AM+LYY S GKN WNCDFR SGLVV +DPS
Sbjct: 61  QKGGPCFYPDDLTNHASVAMNLYYQSHGKNHWNCDFRNSGLVVVSDPS 108

[Close]

BLAST of Lsi04G019650.1 vs. TrEMBL
Match: A0A0D2QXA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G044300 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-37
Identity = 75/108 (69.44%), Postives = 90/108 (83.33%), Query Frame = 1


Query: 1   MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAK AA LS  LL  SF+ G  L+ VN QK+WC+ KPSSDQATLLAN N+AC+QVDC++M
Sbjct: 1   MAKVAAALSLSLLIFSFIPGGTLMMVNGQKSWCVAKPSSDQATLLANINFACSQVDCRVM 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q+G PCF PDNL NHA+IAM+LYY +KG+N+WNCDFRGSGLVV T+PS
Sbjct: 61  QKGCPCFSPDNLMNHASIAMNLYYQAKGRNKWNCDFRGSGLVVITNPS 108

[Close]

BLAST of Lsi04G019650.1 vs. TAIR10
Match: AT1G78520.1 (AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-30
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQ-KTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAKA      L+FL  +S R+ + VNA+ KTWC+ KPSSDQ  L  N N+AC+ VDC+++
Sbjct: 1   MAKAWICLSFLIFLYLVSERNFINVNAETKTWCVAKPSSDQVALQDNINFACSHVDCRVL 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
             G PC+ P NL NHA+IAM+LYY + G+N WNC+F+ SGL+  T+PS
Sbjct: 61  LSGCPCYSPSNLINHASIAMNLYYQANGRNYWNCNFKNSGLITITNPS 108

[Close]

BLAST of Lsi04G019650.1 vs. TAIR10
Match: AT2G43670.1 (AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 4.5e-23
Identity = 45/111 (40.54%), Postives = 73/111 (65.77%), Query Frame = 1


Query: 1   MAKAAT-LSFLLLFLSFLSGRDLLAVNAQKT---WCIPKPSSDQATLLANTNYACAQVDC 60
           MAKA   L F++    +  G  +    A ++   WC+ KPS+D   L  N N+AC+++DC
Sbjct: 1   MAKAQICLCFIIFLYLWPEGNFIKVTKADRSAGDWCVAKPSTDNERLQENINFACSKIDC 60

Query: 61  KIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +I+ +G  C+ PD++ + A++AM+LYY ++G++ WNC+F GSGL+  TDPS
Sbjct: 61  QIISEGGACYLPDSIISRASVAMNLYYQAQGRHFWNCNFEGSGLIGITDPS 111

[Close]

BLAST of Lsi04G019650.1 vs. TAIR10
Match: AT3G28250.1 (AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 5.5e-21
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 1


Query: 31  WCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQ 90
           WC+ KP +    L+ N NYAC+ VDC+I+     C+ PDN++N A++ M+LYY ++G+N 
Sbjct: 3   WCVAKPGTLTEQLINNLNYACSIVDCQIISTRGACYSPDNIYNMASVVMNLYYQAEGRNF 62

Query: 91  WNCDFRGSGLVVTTDPS 108
           WNC+F  SGLV  TDPS
Sbjct: 63  WNCNFGDSGLVAITDPS 79

[Close]

BLAST of Lsi04G019650.1 vs. TAIR10
Match: AT5G53600.1 (AT5G53600.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 7.5e-18
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 10  LLLFLSFLSGRDLL---AVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQQGNPCF 69
           LL FL  LS   +     V  ++TWC   P+S    L +N N+AC  VDC  +Q G  C+
Sbjct: 5   LLTFLFLLSAAVIYHIPVVTCRRTWCTAMPTSTTEQLQSNINFACNHVDCAPIQPGGFCY 64

Query: 70  YPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           YP+ L +HAA AM+ YY S+G     C F  +G ++++DPS
Sbjct: 65  YPNTLLDHAAFAMTRYYRSQGHTYAACSFGNTGYIISSDPS 105

[Close]

BLAST of Lsi04G019650.1 vs. TAIR10
Match: AT4G09462.1 (AT4G09462.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-17
Identity = 46/108 (42.59%), Postives = 61/108 (56.48%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQ-VDCKIM 60
           MAK +  S L L    LS   +  V + KTWCI    +  A L AN N+AC+Q VDC+ +
Sbjct: 1   MAKIS--SPLALLFIMLSSIMINHVASSKTWCIATLIATNAQLQANINFACSQGVDCRPI 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q G  CF P+NL NHA+  M+ YY + G+    C F+ +G    TDPS
Sbjct: 61  QPGGSCFIPNNLANHASFVMNSYYQTHGRTNQACSFKNTGTFAATDPS 106

[Close]

BLAST of Lsi04G019650.1 vs. NCBI nr
Match: gi|659103025|ref|XP_008452435.1| (PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 9.4e-47
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 1


Query: 1   MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSGLV+ TDPS
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLVIITDPS 108

[Close]

BLAST of Lsi04G019650.1 vs. NCBI nr
Match: gi|449456541|ref|XP_004146007.1| (PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-46
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 1


Query: 1   MAK-AATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIM 60
           MAK AA+LSFLLLFLSFLSGRDLLA+NAQKTWCIPKPSSDQATLLAN NYACAQVDC+IM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QQGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           Q+G PC YPD L N AAIAMSLYY+SKGKNQWNCDFRGSGL+V TDPS
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPS 108

[Close]

BLAST of Lsi04G019650.1 vs. NCBI nr
Match: gi|567899660|ref|XP_006442318.1| (hypothetical protein CICLE_v10022921mg [Citrus clementina])

HSP 1 Score: 168.3 bits (425), Expect = 7.2e-39
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQ 60
           MA  A L   LL LSF SG +LL VN QKTWC+ KPSSDQA LLAN NYAC+Q+DC+I+Q
Sbjct: 1   MAPKAALYLFLLLLSFTSGGNLLVVNGQKTWCVAKPSSDQAALLANINYACSQIDCRILQ 60

Query: 61  QGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +G PCFYPDNL NHA+I+M+LYY +KG+N+WNCDFR S L+VTTDPS
Sbjct: 61  KGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPS 107

[Close]

BLAST of Lsi04G019650.1 vs. NCBI nr
Match: gi|590611391|ref|XP_007022089.1| (Carbohydrate-binding X8 domain superfamily protein [Theobroma cacao])

HSP 1 Score: 168.3 bits (425), Expect = 7.2e-39
Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQ 60
           MAK A  S LLL +SF SG  L+ VN QK+WC+ KPSSDQATLLAN NYAC+QVDC+++Q
Sbjct: 1   MAKVAAFSLLLLLVSFTSGGTLMMVNGQKSWCVAKPSSDQATLLANINYACSQVDCRVLQ 60

Query: 61  QGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +G PCF PDNL NHA+IAM+LYY +KG+N+WNCDFR SGLVV TDPS
Sbjct: 61  RGCPCFTPDNLMNHASIAMNLYYQAKGRNRWNCDFRSSGLVVITDPS 107

[Close]

BLAST of Lsi04G019650.1 vs. NCBI nr
Match: gi|568847963|ref|XP_006477797.1| (PREDICTED: glucan endo-1,3-beta-D-glucosidase [Citrus sinensis])

HSP 1 Score: 167.9 bits (424), Expect = 9.4e-39
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 1


Query: 1   MAKAATLSFLLLFLSFLSGRDLLAVNAQKTWCIPKPSSDQATLLANTNYACAQVDCKIMQ 60
           MA  A L   LL LSF SG +LL VN QKTWC+ KPSSDQA LLAN NYAC+Q+DC+I+Q
Sbjct: 1   MAPKAALYLFLLLLSFTSGGNLLMVNGQKTWCVAKPSSDQAALLANINYACSQIDCRILQ 60

Query: 61  QGNPCFYPDNLFNHAAIAMSLYYNSKGKNQWNCDFRGSGLVVTTDPS 108
           +G PCFYPDNL NHA+I+M+LYY +KG+N+WNCDFR S L+VTTDPS
Sbjct: 61  KGYPCFYPDNLMNHASISMNLYYQAKGRNRWNCDFRNSALIVTTDPS 107

The following BLAST results are available for this feature:

BLAST of Lsi04G019650.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALL9_OLEEU	1.6e-17	46.34	Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1	[more]
E13B_WHEAT	8.6e-16	44.16	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	[more]
ALL10_OLEEU	1.1e-15	41.98	Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1	[more]
E131_ARATH	4.4e-12	34.00	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=...	[more]
E137_ARATH	5.8e-12	37.18	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=...	[more]

BLAST of Lsi04G019650.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4I1_CUCSA	1.1e-46	87.04	Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus GN=Csa_4G622750 P...	[more]
V4T5M7_9ROSI	5.0e-39	69.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022921mg PE=4 SV=1	[more]
A0A061FGN1_THECC	5.0e-39	70.09	Carbohydrate-binding X8 domain superfamily protein OS=Theobroma cacao GN=TCM_032...	[more]
A0A059BP19_EUCGR	9.5e-38	70.37	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01381 PE=4 SV=1	[more]
A0A0D2QXA8_GOSRA	1.6e-37	69.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G044300 PE=4 SV=1	[more]

BLAST of Lsi04G019650.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78520.1	2.2e-30	52.78	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G43670.1	4.5e-23	40.54	Carbohydrate-binding X8 domain superfamily protein	[more]
AT3G28250.1	5.5e-21	49.35	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G53600.1	7.5e-18	40.59	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G09462.1	2.2e-17	42.59	Carbohydrate-binding X8 domain superfamily protein	[more]

BLAST of Lsi04G019650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103025\|ref\|XP_008452435.1\|	9.4e-47	87.04	PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo]	[more]
gi\|449456541\|ref\|XP_004146007.1\|	1.6e-46	87.04	PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis sativus]	[more]
gi\|567899660\|ref\|XP_006442318.1\|	7.2e-39	69.16	hypothetical protein CICLE_v10022921mg [Citrus clementina]	[more]
gi\|590611391\|ref\|XP_007022089.1\|	7.2e-39	70.09	Carbohydrate-binding X8 domain superfamily protein [Theobroma cacao]	[more]
gi\|568847963\|ref\|XP_006477797.1\|	9.4e-39	69.16	PREDICTED: glucan endo-1,3-beta-D-glucosidase [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
cellular_component	GO:0009365	protein histidine kinase complex
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004673	protein histidine kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi04G019650	Lsi04G019650	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G019650.1.CDS.3	Lsi04G019650.1.CDS.3	CDS
Lsi04G019650.1.CDS.2	Lsi04G019650.1.CDS.2	CDS
Lsi04G019650.1.CDS.1	Lsi04G019650.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi04G019650.1.five_prime_UTR.1	Lsi04G019650.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi04G019650.1	Lsi04G019650.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 30..99 score: 4.7
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 30..107 score: 8.5
None	No IPR available	PANTHER	PTHR31044	FAMILY NOT NAMED	coord: 1..107 score: 1.0