Lsi04G016280.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi04G016280.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 23768742 .. 23772338 (-)
Sequence length436
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGCTGGAAACAAGATCAAAACTGCATAAGGGAATTGAAAAATAGTTCAGAAATTTATTTGCTGCTATTTTTTCTTAATTGTGTTGCTGTTTTTTTATATATAGCTAATCTTTTGGACTAATATGGAGCTTAGATTGATCAATTCATAAAGGTTAAATGTTGATTCAACAAATAGACATTGTTAGGTTGGAAAATAACTAACGACAATAGCAAAACACATGAAAAACAGCTTAGCAATGGACTTGCTGTAAAAAAAACTGCTCAACTGTCATTTTACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTAACATTATTTCATCATAGGAAGTCACATATTTGTTGTTCTATATTTTCAAAGTTAACCTTTACTCTCTCTTCGATGCATTCCAATGGTGGGTACTCTCTTTTACTCTCTCTTGTGATCCCTTTACTTTCCTGAGTTTTTTTTTTTTTTTCATTCTATTATTGTCTTTTCTCTTAGTTATTCAATTACTATTGTCTTTTCTATTTGGTTACAATTACTAATTTTCTCTTCATTTTGATAAGCTTAGTTGCTATGATACATAAGTTTGTTTTCCAATGAGATATGTTCATGAGTTTTGTTACTTTGTTCTCATGTACTTAGCTTACATATAGTTTTAAGTAAAATGTGTCTATACTAATTTTCTTTTCTTTTCATGTTATCGTGTGTATTTATATTTTTCTTATTCATTTTGATCAGTCAAGTCACACACACCAAATAAATGGTCGAGAAGTGGTAGCTCAAGCTTCAATCAACTTCTTGAAATTAAAGGTGCTGCCCATACAAATTTGTCTGAGATTTTCGCCACTCAGTTGGTTTCTGGTGTAAAAGGTAACATCTCCATCTTCCAATCTCTTTTCAAGAAATCATCAAATTTATTGTTCTTGTAGTTTCTGTTCAAAATTAATTAGTTTAGTGAACTTTATGTTCAAAGTCGCAACCTCTCAAGTTTTATTTACTATATTTCATTTTTCTGTTACTAATTGAGTGTGCTACTCAAATTGGTAATCTCTTAAGTTCTTGATTTCTTGTCAATAATGTGAACTAAATTCCTATCATCAAGCTCTTGATTTCTTTTTCTTAAACTGAATGCAGATTGCTTCAACCCCAATGCCTAATATGTATAAAAACAAAAAGGTAATACCCTTTCAACAATGGTTTAAGCTTTCTAGTCTTAATTTTCTACTTAAAACACATGAAAAAACAGCTTAGCAATGGACTTGTGTCTGTCAAAAAACTGCTCAACTATCATTTTAATGTTGTTTTTTTGTTTAACATCATTTCATTATAGGAAGACACATATTTGTTGTTTTATATATTTGAAGTTAACATTTACTCTCTCTTCGATGCATTCCAATGGTGGGTACTCTCTTTTACTCTCTCTTTGTAATCCGTTATTTTTCTGAGTTTTTTTCCATTCTATTTCCTAGTTAATTTCGTAGGCTTTGTCGGACTAGAAGACGGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGCGACACTGGTATGATTTAATAAGTGGGCTGATTGATCTGCCTTTCTTTGCATGAAATTGGTATTGACTGACTTATCCATATTGGATAGAAATGCTTGAAATTTGTATGAAATTTCTATATTGGATAGAAATGCTTGATACTTTGTAATAGAATTATAGCCTACTTAGTTGTGATCAAGTTTAGTTTAATTCTTGATTGAGATGTTGATAGTTGACCTTGAGTTGTTATTGATTGGCTTGTAAAACGTAGCTAATGAGGTGGCTACAACTTATACTTGTGGGAGTGCTAATAAAGTTTAGTTTGTAGTACTAAATGCTTAACTTGAGCCATATACTTTCCATGATACATAGGTTGCAGATTGATTATTCGGGAGTTTTGGATTCAATAGGAGTTTTGTTTTGCTTTTCTTTGAGCTCTTCTAAGGGAGTTGTTTACTTTGTAGTAGTGTTGTTTACTTTATAGTAGTGGGTGGATGGTTTTCCTAACCTATCAAAGGAGTAGTTGGTGGATGTTGTTCAAAGGCATTTCATATCCCAGGTACTCAGTTTTCTTTGTTTAACTGTGTATTTTTCATTCAATCAATGTCAACGTTTTCATTTTCATTTTAAGTCTTCCTCAAAATCTCGATTTATATAGATTAGTTAAGGTGCACTTGATTTCTTATTAAGTCCCATGAGATTAGTTAAGGTGCACGCAAATTGGACCGGGCACAAGGTGTTTGGAATATATACATTAGTTTATAGCTTTAGGGTATAAAATTTATTTCATTATGTGTTTTTTTTGCATTTTCTCATATTGGATTCTCAATCTAACATATCTTATTTATTTGCTTGTTTTTGCTTTCTTGTGCTTGAGTTTTTATGTTGAATATGAGATGAGTCTCTATTTTCAAGTTAAGGCTAAGATCTCTCTAGAATTATTATGTTAGATATTGAGTTTTTCTAGAATTATTATGTTACCAGGCTATGTATTTTACTATGAGAAAATACATGTGGTAAGTGTTTAAACTTTGACTTGCATGGAGATAACAATGAGGCTTCATTAGGTATTTAACGCTCTTATATTATCTTAGATGCTAAATATCTTTGTGAACATCTATTAAAGTTAATTAGTAATTTATGAGCTAAGAATATTTTAATTTGAGCTTTTGATTTTTCACTTTTGTTGAAAACTTAAAAATTTTGTTTGTAGATTTTTGCTTCAAAAAATTACACGGTGAAACTGACGATGGGGCTTCACGAAGTATTTAACGATCAAAAAGACAGTTATTGAGGGTCATCATGTAATTTAAGGTTTTAGAGTCTTGTATTTATTATAGTTAAGGTTTTGTATTTAAGCTTTTGTTTATCTCTGTAAATTAAATGTAAGTTGATATAGGGATTTGTTGTCTAAACCATATGGAGTTGATTTAAATGAAAAATATATTTATCTTGGTTTTGGAGTTAAATTATCATCAAAT

mRNA sequence

ATGGTCAAGTCACACACACCAAATAAATGGTCGAGAAGTGGTAGCTCAAGCTTCAATCAACTTCTTGAAATTAAAGGTGCTGCCCATACAAATTTGTCTGAGATTTTCGCCACTCAGTTGGTTTCTGGTGTAAAAGGCTATGTATTTTACTATGAGAAAATACATGTGATTTTTGCTTCAAAAAATTACACGGTGAAACTGACGATGGGGCTTCACGAAGTATTTAACGATCAAAAAGACAGTTATTGAGGGTCATCATGTAATTTAAGGTTTTAGAGTCTTGTATTTATTATAGTTAAGGTTTTGTATTTAAGCTTTTGTTTATCTCTGTAAATTAAATGTAAGTTGATATAGGGATTTGTTGTCTAAACCATATGGAGTTGATTTAAATGAAAAATATATTTATCTTGGTTTTGGAGTTAAATTATCATCAAAT

Coding sequence (CDS)

ATGGTCAAGTCACACACACCAAATAAATGGTCGAGAAGTGGTAGCTCAAGCTTCAATCAACTTCTTGAAATTAAAGGTGCTGCCCATACAAATTTGTCTGAGATTTTCGCCACTCAGTTGGTTTCTGGTGTAAAAGGCTATGTATTTTACTATGAGAAAATACATGTGATTTTTGCTTCAAAAAATTACACGGTGAAACTGACGATGGGGCTTCACGAAGTATTTAACGATCAAAAAGACAGTTATTGA

Protein sequence

MVKSHTPNKWSRSGSSSFNQLLEIKGAAHTNLSEIFATQLVSGVKGYVFYYEKIHVIFASKNYTVKLTMGLHEVFNDQKDSY
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi04G016280Lsi04G016280gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi04G016280.1.three_prime_UTR.1Lsi04G016280.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi04G016280.1.CDS.4Lsi04G016280.1.CDS.4CDS
Lsi04G016280.1.CDS.3Lsi04G016280.1.CDS.3CDS
Lsi04G016280.1.CDS.2Lsi04G016280.1.CDS.2CDS
Lsi04G016280.1.CDS.1Lsi04G016280.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi04G016280.1Lsi04G016280.1-proteinpolypeptide