Lsi04G000620.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi04G000620.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 795523 .. 796157 (+)
Sequence length341
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAGGAAAGAATTGGAAAAAATTAATAGCCTCATATAATGAAATTTGGAATCGGTAGTATACGGCCTGAACCGAGGAATGTCCGTATCAAATTCAGTTGGTTCATCAAAGAGCACGTCCCGCCCTTTTGCACCCACCATAAATACCGCCATTTCTGTACTCCAAGCTCTCATGTGCCGCTCTCCCGATCCCGCCCCACTCTCGAGGTTAGATTCTCTAATGCACTGTCTTTTCAGCTTCACTTTCCTTTTTCTTTTTTATGCATTGTAGTTTGATTCTTTTCCCGTTTGAATCTGGTGCGGAATCTTTATGGTTTGCATCTCTGTTTCTCTGTCCCTTCACTTTCCGCCTATTTTGATGCTTGTTTTAGTCCTCAATATTAAAGCTGTTCATGTCAAACATGTAGCTTCTAATTGATTGTGAAGTGAAAGCCTTTTGAATTTGGTCACTGTAAATCAGATTTAGGAGATTCGGTTGAATATTCTGAAACTGAATGTTAGTAATAACTGCATTGGTTTAGACCTGTGGATTCGAAATGAATTAGAAGATTTAGATTTTGTGTACAGATCTTGTCTCATTTTGCTTCAACTCTCCAACTGTTTGATTAGTTTCGAGATCGAGTGTTTACTTTAA

mRNA sequence

GAAAAAGGAAAGAATTGGAAAAAATTAATAGCCTCATATAATGAAATTTGGAATCGGTAGTATACGGCCTGAACCGAGGAATGTCCGTATCAAATTCAGTTGGTTCATCAAAGAGCACGTCCCGCCCTTTTGCACCCACCATAAATACCGCCATTTCTGTACTCCAAGCTCTCATGTGCCGCTCTCCCGATCCCGCCCCACTCTCGAGTAATAACTGCATTGGTTTAGACCTGTGGATTCGAAATGAATTAGAAGATTTAGATTTTGTGTACAGATCTTGTCTCATTTTGCTTCAACTCTCCAACTGTTTGATTAGTTTCGAGATCGAGTGTTTACTTTAA

Coding sequence (CDS)

ATGTCCGTATCAAATTCAGTTGGTTCATCAAAGAGCACGTCCCGCCCTTTTGCACCCACCATAAATACCGCCATTTCTGTACTCCAAGCTCTCATGTGCCGCTCTCCCGATCCCGCCCCACTCTCGAGTAATAACTGCATTGGTTTAGACCTGTGGATTCGAAATGAATTAGAAGATTTAGATTTTGTGTACAGATCTTGTCTCATTTTGCTTCAACTCTCCAACTGTTTGATTAGTTTCGAGATCGAGTGTTTACTTTAA

Protein sequence

MSVSNSVGSSKSTSRPFAPTINTAISVLQALMCRSPDPAPLSSNNCIGLDLWIRNELEDLDFVYRSCLILLQLSNCLISFEIECLL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi04G000620Lsi04G000620gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi04G000620.1.five_prime_UTR.1Lsi04G000620.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi04G000620.1.CDS.1Lsi04G000620.1.CDS.1CDS
Lsi04G000620.1.CDS.2Lsi04G000620.1.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi04G000620.1Lsi04G000620.1-proteinpolypeptide