Lsi03G017990.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi03G017990.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr03 : 29403827 .. 29406004 (-)
Sequence length2178
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAAGGTTTATGCCGTCGACTCTTGTGAAGAAAATTCTCAAAGGGGTCATACCAAATTCATGTTTATCTCCAATTCTCAGCGGTATTCACGTTGACACTTTCCTGGAAAACAATCAGAACTGTCCAAGGTCTAAACAAAGTACCCAATTCTTGAGTGATAAGTCTGTCTCGAACAACTCAGTCAAAGGTTTGGATAACGATAAGAACTTGAACTCAGAGGTAGAAATCTTCAAATGTCTGGCTATCCAGAAGGGATTTTTCCAGACTGTCCAAACATATTACGAGACCATTCTAAAGCTGGGTTTGGATGGAAACATTGAGGAAATGGAAAGGACTTGTCGAGATCTTGTGAATGAGGGGTGCTCGGGTGTAGAAGAAGTTATTGTCACGTTGGTTAATGCCTTCGTGAGACATGGTAGAACCAGAGAAGCACTTCGAGTACTTCCTCATATAAGTTTGGTTGGTTTAAAGCCTTCAGTAGAGACATTTAATGTTGTATTGGCTGTTTTCGTTGAAGAGAATAGAGATATTCAGGAGGTGTTATTTGTTTACAAGGAAATGGTGAAAGCTGGAATTGTACCAAATGTTGACACATTGAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATTAAGACAGCCATGAACCAATTTAGGAGAATGAGCAAGAAAGGCTGCATTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACAAAAGATCTAGTGGATGAAGCTGTTTTAGTTTTGGGTATAATGTACAAAATTGGGTGCAAACTTGATTTGAGCTTTTATACATGTGCAATATCTTTATTTTGTAGGGAAGATAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAGGCTTCCAATATTGTACCAGTTACATTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAACCTTTCATTAGATGAGGCATTATTCCTGCTTGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTGTATGTAAGTATTATAAAAGCTTTTTTTGAGCTTGGGAAAACAGATGAGGCTATAAAGTTTGTGGACGATAGATGTGCTTTTTATACTGCTTCTCACAATGCATTGCTTGAAGGTTGCTCCGATGCTGGAAAGATTTCATTAGCAAATTGTATCCTAGGGGAAATGTCAAAAATGAATATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAACGCAAGAATTGGAAATGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTTCCTAACGAAGACACATATGCAGCTCTTATAGTTGGAAACTGTAAATCCAAGAGGTATGAGGCTGCATTACAGTTAATGAATGAGGTACATGCTAGATGTTGGATTCTGAATGCCGGATGTTACTCTGAGCTTATAGAAGGCCTTTGTCAAGCCAATAGGACCCTTGAGGCTGCAGAAGTTTTTTGCTACATGTCTAAAAATAGATACCCTCTTCATCCGTCTTTATTTGATACATTGATCAAGGGGATGTGTGATTTAGGATATATTGATGAAACATTAGTGCTGCTACAGTTGGCATGTTATGCTGGTACTTCTTGTAAAACTGTGACATATGCTTCTATAATGCATGAGTTGTCTAAATCTAACAAGGCAGAGATCACCTTACTAGTCTTATCACAGATGCTGGTGTTGGGTTATAGCCTTAATTTGGAGACATACTACATTCTCATACATAGTTTTAGTGCGATGAATCGAGTAAAGGAGTCTATATTGCTTTTCAACCATATGGTCTATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTTTTATGTATAGCCAACCATTCTCAGCTGCATATGATTTCAACTACAATTGATAAACTCATTACTCATACTGACCTTGTAAATACTGCAACTTACAACTTACTTATCAATGGGTTATGGAAAGAGGACAGAAAGCATGAAGCATGTAAATTGTTGGACTCAATGTTGGAAAAAGGGTGGGTACCAGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAAAGAGAAGACTGGGGATAGGATTTTAATTAATGAGCATTCCGTCATTGAAGATAATGTAAGCAGCATACTCGTTGAGGGCCTAGGGAATTCATGA

mRNA sequence

ATGGCTGCAAGGTTTATGCCGTCGACTCTTGTGAAGAAAATTCTCAAAGGGGTCATACCAAATTCATGTTTATCTCCAATTCTCAGCGGTATTCACGTTGACACTTTCCTGGAAAACAATCAGAACTGTCCAAGGTCTAAACAAAGTACCCAATTCTTGAGTGATAAGTCTGTCTCGAACAACTCAGTCAAAGGTTTGGATAACGATAAGAACTTGAACTCAGAGGTAGAAATCTTCAAATGTCTGGCTATCCAGAAGGGATTTTTCCAGACTGTCCAAACATATTACGAGACCATTCTAAAGCTGGGTTTGGATGGAAACATTGAGGAAATGGAAAGGACTTGTCGAGATCTTGTGAATGAGGGGTGCTCGGGTGTAGAAGAAGTTATTGTCACGTTGGTTAATGCCTTCGTGAGACATGGTAGAACCAGAGAAGCACTTCGAGTACTTCCTCATATAAGTTTGGTTGGTTTAAAGCCTTCAGTAGAGACATTTAATGTTGTATTGGCTGTTTTCGTTGAAGAGAATAGAGATATTCAGGAGGTGTTATTTGTTTACAAGGAAATGGTGAAAGCTGGAATTGTACCAAATGTTGACACATTGAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATTAAGACAGCCATGAACCAATTTAGGAGAATGAGCAAGAAAGGCTGCATTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACAAAAGATCTAGTGGATGAAGCTGTTTTAGTTTTGGGTATAATGTACAAAATTGGGTGCAAACTTGATTTGAGCTTTTATACATGTGCAATATCTTTATTTTGTAGGGAAGATAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAGGCTTCCAATATTGTACCAGTTACATTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAACCTTTCATTAGATGAGGCATTATTCCTGCTTGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTGTATGTAAGTATTATAAAAGCTTTTTTTGAGCTTGGGAAAACAGATGAGGCTATAAAGTTTGTGGACGATAGATGTGCTTTTTATACTGCTTCTCACAATGCATTGCTTGAAGGTTGCTCCGATGCTGGAAAGATTTCATTAGCAAATTGTATCCTAGGGGAAATGTCAAAAATGAATATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAACGCAAGAATTGGAAATGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTTCCTAACGAAGACACATATGCAGCTCTTATAGTTGGAAACTGTAAATCCAAGAGGTATGAGGCTGCATTACAGTTAATGAATGAGGTACATGCTAGATGTTGGATTCTGAATGCCGGATGTTACTCTGAGCTTATAGAAGGCCTTTGTCAAGCCAATAGGACCCTTGAGGCTGCAGAAGTTTTTTGCTACATGTCTAAAAATAGATACCCTCTTCATCCGTCTTTATTTGATACATTGATCAAGGGGATGTGTGATTTAGGATATATTGATGAAACATTAGTGCTGCTACAGTTGGCATGTTATGCTGGTACTTCTTGTAAAACTGTGACATATGCTTCTATAATGCATGAGTTGTCTAAATCTAACAAGGCAGAGATCACCTTACTAGTCTTATCACAGATGCTGGTGTTGGGTTATAGCCTTAATTTGGAGACATACTACATTCTCATACATAGTTTTAGTGCGATGAATCGAGTAAAGGAGTCTATATTGCTTTTCAACCATATGGTCTATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTTTTATGTATAGCCAACCATTCTCAGCTGCATATGATTTCAACTACAATTGATAAACTCATTACTCATACTGACCTTGTAAATACTGCAACTTACAACTTACTTATCAATGGGTTATGGAAAGAGGACAGAAAGCATGAAGCATGTAAATTGTTGGACTCAATGTTGGAAAAAGGGTGGGTACCAGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAAAGAGAAGACTGGGGATAGGATTTTAATTAATGAGCATTCCGTCATTGAAGATAATGTAAGCAGCATACTCGTTGAGGGCCTAGGGAATTCATGA

Coding sequence (CDS)

ATGGCTGCAAGGTTTATGCCGTCGACTCTTGTGAAGAAAATTCTCAAAGGGGTCATACCAAATTCATGTTTATCTCCAATTCTCAGCGGTATTCACGTTGACACTTTCCTGGAAAACAATCAGAACTGTCCAAGGTCTAAACAAAGTACCCAATTCTTGAGTGATAAGTCTGTCTCGAACAACTCAGTCAAAGGTTTGGATAACGATAAGAACTTGAACTCAGAGGTAGAAATCTTCAAATGTCTGGCTATCCAGAAGGGATTTTTCCAGACTGTCCAAACATATTACGAGACCATTCTAAAGCTGGGTTTGGATGGAAACATTGAGGAAATGGAAAGGACTTGTCGAGATCTTGTGAATGAGGGGTGCTCGGGTGTAGAAGAAGTTATTGTCACGTTGGTTAATGCCTTCGTGAGACATGGTAGAACCAGAGAAGCACTTCGAGTACTTCCTCATATAAGTTTGGTTGGTTTAAAGCCTTCAGTAGAGACATTTAATGTTGTATTGGCTGTTTTCGTTGAAGAGAATAGAGATATTCAGGAGGTGTTATTTGTTTACAAGGAAATGGTGAAAGCTGGAATTGTACCAAATGTTGACACATTGAATTTTCTGTTAGCTGCATTGTTTCATGCTGAACAAATTAAGACAGCCATGAACCAATTTAGGAGAATGAGCAAGAAAGGCTGCATTCCTAACAGTAAAACCTTTGAGGTTCTCTTAAATGGTTTAATTACAAAAGATCTAGTGGATGAAGCTGTTTTAGTTTTGGGTATAATGTACAAAATTGGGTGCAAACTTGATTTGAGCTTTTATACATGTGCAATATCTTTATTTTGTAGGGAAGATAGAATAGATGTTGGAAGCTGGTTGTTTAGAATGATGAAGGCTTCCAATATTGTACCAGTTACATTGATTTATAGTACTCTAATACAAAGTTTGTGCAAAAACCTTTCATTAGATGAGGCATTATTCCTGCTTGAAGAGATGGTTGAAAGTGGTTTGATGCCTGAAGACAATGTGTATGTAAGTATTATAAAAGCTTTTTTTGAGCTTGGGAAAACAGATGAGGCTATAAAGTTTGTGGACGATAGATGTGCTTTTTATACTGCTTCTCACAATGCATTGCTTGAAGGTTGCTCCGATGCTGGAAAGATTTCATTAGCAAATTGTATCCTAGGGGAAATGTCAAAAATGAATATTGATGATTGTAAATCTTGGAACATAGTTATTGGATGGTTGTGCAACAACGCAAGAATTGGAAATGCTTTTGAATTCCTTGGTAAAATGATTGTGTTGTCATTTGTTCCTAACGAAGACACATATGCAGCTCTTATAGTTGGAAACTGTAAATCCAAGAGGTATGAGGCTGCATTACAGTTAATGAATGAGGTACATGCTAGATGTTGGATTCTGAATGCCGGATGTTACTCTGAGCTTATAGAAGGCCTTTGTCAAGCCAATAGGACCCTTGAGGCTGCAGAAGTTTTTTGCTACATGTCTAAAAATAGATACCCTCTTCATCCGTCTTTATTTGATACATTGATCAAGGGGATGTGTGATTTAGGATATATTGATGAAACATTAGTGCTGCTACAGTTGGCATGTTATGCTGGTACTTCTTGTAAAACTGTGACATATGCTTCTATAATGCATGAGTTGTCTAAATCTAACAAGGCAGAGATCACCTTACTAGTCTTATCACAGATGCTGGTGTTGGGTTATAGCCTTAATTTGGAGACATACTACATTCTCATACATAGTTTTAGTGCGATGAATCGAGTAAAGGAGTCTATATTGCTTTTCAACCATATGGTCTATGAGGGTCTTCTACCTGATTCAGAAAGACTTTATGATTTATTTTTATGTATAGCCAACCATTCTCAGCTGCATATGATTTCAACTACAATTGATAAACTCATTACTCATACTGACCTTGTAAATACTGCAACTTACAACTTACTTATCAATGGGTTATGGAAAGAGGACAGAAAGCATGAAGCATGTAAATTGTTGGACTCAATGTTGGAAAAAGGGTGGGTACCAGATGCTATGACTCATGGATTGCTGATTGGCTCTCTAGTTAAAGAGAAGACTGGGGATAGGATTTTAATTAATGAGCATTCCGTCATTGAAGATAATGTAAGCAGCATACTCGTTGAGGGCCTAGGGAATTCATGA

Protein sequence

MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGLGNS
BLAST of Lsi03G017990.1 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.6e-51
Identity = 159/648 (24.54%), Postives = 298/648 (45.99%), Query Frame = 1

Query: 64  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 123
           K L+   N+++ +E+F     Q G+  +   Y   I KLG +G  + ++R    + +EG 
Sbjct: 83  KLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI 142

Query: 124 SGVEEVIVTLVNAFVRHGRTREALRVLPHI-SLVGLKPSVETFNVVLAVFVEENRDIQEV 183
              E + ++++  + + G   +  R++  + ++   +P+ +++NVVL + V  N   +  
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVA 202

Query: 184 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNG 243
             V+ +M+   I P + T   ++ A     +I +A++  R M+K GC+PNS  ++ L++ 
Sbjct: 203 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 262

Query: 244 LITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPV 303
           L   + V+EA+ +L  M+ +GC  D   +   I   C+ DRI+  + +   M      P 
Sbjct: 263 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 322

Query: 304 TLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVD 363
            + Y  L+  LCK   +D A  L   + +    PE  ++ ++I  F   G+ D+A   + 
Sbjct: 323 DITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLS 382

Query: 364 DRCAFY-----TASHNALLEGCSDAGKISLANCILGEMSKMNIDDCK----SWNIVIGWL 423
           D    Y       ++N+L+ G    G + LA  +L +M       CK    S+ I++   
Sbjct: 383 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGF 442

Query: 424 CNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNA 483
           C   +I  A+  L +M      PN   +  LI   CK  R   A+++  E+  +    + 
Sbjct: 443 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 502

Query: 484 GCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQL 543
             ++ LI GLC+ +    A  +   M       +   ++TLI      G I E   L+  
Sbjct: 503 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 562

Query: 544 ACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNR 603
             + G+    +TY S++  L ++ + +    +  +ML  G++ +  +  ILI+       
Sbjct: 563 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 622

Query: 604 VKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNL 663
           V+E++     MV  G  PD      L   +    ++    T   KL       +T T+N 
Sbjct: 623 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 682

Query: 664 LINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDR 702
           L++ L K    ++AC LLD  +E G+VP+  T  +L+ S++ ++T DR
Sbjct: 683 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722

BLAST of Lsi03G017990.1 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-44
Identity = 159/658 (24.16%), Postives = 292/658 (44.38%), Query Frame = 1

Query: 40  NQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNL---NSEVEIFKCLAIQKGFFQTVQTYY 99
           N   P S  S       ++S+  VK LD+ ++    ++ + +F   + +  F      Y 
Sbjct: 28  NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87

Query: 100 ETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPH-ISL 159
           E +L+LG  G+ ++M++   D+ +  C       + L+ ++ +     E L V+   I  
Sbjct: 88  EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147

Query: 160 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 219
            GLKP    +N +L + V+ N  ++ V   + +M   GI P+V T N L+ AL  A Q++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 207

Query: 220 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 279
            A+     M   G +P+ KTF  ++ G I +  +D A+ +   M + GC          +
Sbjct: 208 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 267

Query: 280 SLFCREDRI-DVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGL 339
             FC+E R+ D  +++  M       P    ++TL+  LCK   +  A+ +++ M++ G 
Sbjct: 268 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 327

Query: 340 MPEDNVYVSIIKAFFELGKTDEAIKFVDDR----CAFYTASHNALLEGCSDAGKISLANC 399
            P+   Y S+I    +LG+  EA++ +D      C+  T ++N L+       ++  A  
Sbjct: 328 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 387

Query: 400 ILGEM-SKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNC 459
           +   + SK  + D  ++N +I  LC       A E   +M      P+E TY  LI   C
Sbjct: 388 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 447

Query: 460 KSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPS 519
              + + AL ++ ++       +   Y+ LI+G C+AN+T EA E+F  M  +    +  
Sbjct: 448 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 507

Query: 520 LFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQM 579
            ++TLI G+C    +++   L+      G      TY S++    +    +    ++  M
Sbjct: 508 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 567

Query: 580 LVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEG--LLPDSER--LYDLFLCIAN 639
              G   ++ TY  LI       RV+ +  L   +  +G  L P +    +  LF     
Sbjct: 568 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 627

Query: 640 HSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRK-HEACKLLDSMLEKGWVPD 683
              +++    +++     D V   +Y ++  GL        EA   L  +LEKG+VP+
Sbjct: 628 TEAINLFREMLEQNEAPPDAV---SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

BLAST of Lsi03G017990.1 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.8e-44
Identity = 129/463 (27.86%), Postives = 221/463 (47.73%), Query Frame = 1

Query: 156 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+++++  F   ++ +   L V  +M+K G  P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 216 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 275
            A++   +M + G  P+S TF  L++GL   +   EAV ++  M   GC+ DL  Y   +
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 276 SLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLM 335
           +  C+   ID+   L + M+   I P  +IY+T+I +LC   ++++AL L  EM   G+ 
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 336 PEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFYTASHNALLEGCSDAGKISLANCI 395
           P    Y S+I+     G+  +A + + D    +      + +AL++     GK+  A  +
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 396 LGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCK 455
             EM K +ID D  +++ +I   C + R+  A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 456 SKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSL 515
           +KR +  ++L  E+  R  + N   Y+ LI G  QA     A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 516 FDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQML 575
           +  L+ G+C+ G ++  LV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 576 VLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDS 614
           + G   N+ TY  ++  F      +E+  LF  M  EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

BLAST of Lsi03G017990.1 vs. Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-43
Identity = 159/617 (25.77%), Postives = 284/617 (46.03%), Query Frame = 1

Query: 76  VEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCR--DLVNEGCSGVEEVIVTL 135
           +++F  LA  KG F +  T    +  L       E ++ C   D+V +G S    +  T 
Sbjct: 224 LDVFPVLA-NKGMFPSKTTCNILLTSLV---RANEFQKCCEAFDVVCKGVSPDVYLFTTA 283

Query: 136 VNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKE-MVKA 195
           +NAF + G+  EA+++   +   G+ P+V TFN V+       R   +  F++KE MV+ 
Sbjct: 284 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEKMVER 343

Query: 196 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 255
           G+ P + T + L+  L  A++I  A    + M+KKG  PN   +  L++  I    +++A
Sbjct: 344 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 403

Query: 256 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 315
           + +  +M   G  L  S Y   I  +C+  + D    L + M +         ++++I  
Sbjct: 404 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 463

Query: 316 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIK----FVDDRCAFY 375
           LC +L  D AL  + EM+   + P   +  ++I    + GK  +A++    F++      
Sbjct: 464 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 523

Query: 376 TASHNALLEGCSDAGKISLANCILGE-MSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLG 435
           T + NALL G  +AGK+  A  I  E + +  + D  S+N +I   C   ++  AF FL 
Sbjct: 524 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 583

Query: 436 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 495
           +M+     P+  TY+ LI G     + E A+Q  ++      + +   YS +I+G C+A 
Sbjct: 584 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 643

Query: 496 RTLEAAEVFC-YMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTY 555
           RT E  E F   MSKN  P +  +++ LI+  C  G +   L L +   + G S  + TY
Sbjct: 644 RTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 703

Query: 556 ASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVY 615
            S++  +S  ++ E   L+  +M + G   N+  Y  LI  +  + ++ +   L   M  
Sbjct: 704 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 763

Query: 616 EGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHE 675
           + + P+      +    A    +   S  ++++     + ++ TY   I G  K+    E
Sbjct: 764 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 823

Query: 676 ACKLLD----SMLEKGW 680
           A K  D    + + +GW
Sbjct: 824 AFKGSDEENYAAIIEGW 833

BLAST of Lsi03G017990.1 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 3.3e-42
Identity = 127/486 (26.13%), Postives = 231/486 (47.53%), Query Frame = 1

Query: 133 LVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKA 192
           L++A  +  +    + +   +  +G+  +  T+++++  F   ++ +   L V  +M+K 
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKL 146

Query: 193 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 252
           G  PN+ TL+ LL    H+++I  A+    +M   G  PN+ TF  L++GL   +   EA
Sbjct: 147 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 206

Query: 253 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 312
           + ++  M   GC+ DL  Y   ++  C+    D+   L   M+   + P  LIY+T+I  
Sbjct: 207 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 266

Query: 313 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFY 372
           LCK   +D+AL L +EM   G+ P    Y S+I      G+  +A + + D    +    
Sbjct: 267 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 326

Query: 373 TASHNALLEGCSDAGKISLANCILGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLG 432
             + +AL++     GK+  A  +  EM K +ID    +++ +I   C + R+  A +   
Sbjct: 327 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 386

Query: 433 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 492
            M+     P+  TY  LI G CK KR E  +++  E+  R  + N   Y+ LI+GL QA 
Sbjct: 387 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 446

Query: 493 RTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYA 552
               A E+F  M  +  P +   ++TL+ G+C  G +++ +V+ +    +       TY 
Sbjct: 447 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 506

Query: 553 SIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYE 612
            ++  + K+ K E    +   + + G   ++  Y  +I  F      +E+  LF  M  +
Sbjct: 507 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 566

Query: 613 GLLPDS 614
           G LP+S
Sbjct: 567 GTLPNS 571

BLAST of Lsi03G017990.1 vs. TrEMBL
Match: A0A0A0LE83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1)

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 653/728 (89.70%), Postives = 694/728 (95.33%), Query Frame = 1

Query: 1   MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
           MAAR MPSTL+KK LKGV+PNSCLSPILSGIHVDTFLENNQNCPR KQSTQFLSDKSVSN
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60

Query: 61  NSV---KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
           NSV   KGLD DKNLNSEVEIFK LAIQKG FQ+VQTYYETILKLGLDGNIEEME TCRD
Sbjct: 61  NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120

Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
           LVNEGCSGVEEVIVTLVN  VR GR REALRVLPHISLVGL+PSVETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180

Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
           DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
           VL+NGLITK+LVDEAVLVLGIMYKI C+L LSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
           NIVP TLIYSTLIQSLCK+LSLD+ALFLLEEMVE+GL+PE++VYVSI++ FFELGKTDEA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360

Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
           IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
           +IGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYEAALQLMNEVH+RCWILNAGCYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480

Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
           ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIKGMCDLG++DE LVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540

Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
           GTSCK+VTYASI+HELSKSNKAE  LLVLSQMLVLG +L+LETYYILIHSFS++NRVKES
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600

Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
           ILLFNHMV E LLPDSERLYDLFLCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
           LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGD++LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720

Query: 721 LVEGLGNS 726
           LVEGLGNS
Sbjct: 721 LVEGLGNS 728

BLAST of Lsi03G017990.1 vs. TrEMBL
Match: M5WJY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 2.0e-200
Identity = 365/719 (50.76%), Postives = 502/719 (69.82%), Query Frame = 1

Query: 7   PSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRS---KQSTQFLSDKSVSNNSV 66
           P T  K+I   V   +C+S       V+ F   NQ+ P S   +Q+ Q L +K V +N +
Sbjct: 4   PLTFSKRIPFWVCSGACISSASCAKTVECFPGKNQDPPNSSDFEQNIQSLRNKLVPDNLI 63

Query: 67  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 126
           + LDN  +L+S V++FK  ++Q+ F  T  TYY  ILKLGL G +EEME  C+++V + C
Sbjct: 64  RVLDNTDDLSSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQNMVKDKC 123

Query: 127 SGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVL 186
            GVEE ++ LV+ FV+H R  EA+RVL ++   G +PS+ETFN VL   VE+ RD Q+VL
Sbjct: 124 PGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPSIETFNAVLGALVEDKRDFQDVL 183

Query: 187 FVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGL 246
           FVYKEMV AGI+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFE+L+   
Sbjct: 184 FVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNCRTFEILIKAH 243

Query: 247 ITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVT 306
           I K  VDEAV+VL  M ++GC+ DLSFY+  I LFC+ +R + G  LF MM+ASN +P +
Sbjct: 244 IAKGRVDEAVIVLSEMLELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRASNFMPDS 303

Query: 307 LIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD 366
           LI   L+Q LCKNL L++A+ +LE+M+E+GL P ++V+  ++  F +LGK D+A+KF++D
Sbjct: 304 LICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDVFADVVNVFCKLGKIDDAMKFLED 363

Query: 367 RCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAF 426
           +    T+  N LLEGC  AGK  +A  +L +MS+ ++ DC SWNI+I WLC N+RI  A 
Sbjct: 364 KHILETSVCNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENSRIRVAS 423

Query: 427 EFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGL 486
           E LG+M+V S +P+  TY+AL++GNCK   Y  AL L + + A+ W+L+   YSEL++GL
Sbjct: 424 EILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHIRAKSWVLDPTSYSELVKGL 483

Query: 487 CQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKT 546
           C    T EA EVFCYMS NR  +  S F+ LIKG+C+ G +DE + L +LA Y+GTS  +
Sbjct: 484 CLVEMTHEATEVFCYMSSNRCSIQSSSFNMLIKGVCETGKVDEAIRLQKLAYYSGTSSTS 543

Query: 547 VTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNH 606
            TY++IM  LSK + A+  L+VLS+MLV G +L+L+ Y ILI S S  NRVKE ILLF  
Sbjct: 544 STYSAIMFGLSKVDNAKDLLVVLSKMLVEGCNLDLDAYCILIQSMSLQNRVKECILLFRM 603

Query: 607 MVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDR 666
           MV +GL+PDSERL++L  CIAN SQLH+IS +IDKL + ++ +N+A YN+LINGLWKE  
Sbjct: 604 MVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSEALNSAIYNVLINGLWKEGY 663

Query: 667 KHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGL 723
           KHEAC+LLD MLEKGWVPDA THGLLIGS V E+    +L  ++  ++D VS+ILVEGL
Sbjct: 664 KHEACRLLDIMLEKGWVPDAKTHGLLIGSAVSEEVDWNVLDYDNCTVQDTVSNILVEGL 722

BLAST of Lsi03G017990.1 vs. TrEMBL
Match: B9N416_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 6.8e-196
Identity = 357/722 (49.45%), Postives = 492/722 (68.14%), Query Frame = 1

Query: 7   PSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQ---STQFLSDKSVSNNSV 66
           PST +K+I K V   + +S +     +    E NQN P         Q L +K   +N +
Sbjct: 4   PSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDNLI 63

Query: 67  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 126
           K L +  ++NS V+IFK  A+Q+ F  T  TYY  I KLG+ GN+EEME  C+++V E C
Sbjct: 64  KVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKERC 123

Query: 127 SGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVL 186
           +G E+V+V+LV+AFVR+ R  EA+RVL +++L G+KPS++ FN VL   VEE R  Q+V+
Sbjct: 124 TGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVV 183

Query: 187 FVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGL 246
           FVYKEMVKAG+ P++DTLN+LL  LF  +++ +A++Q+RR++KKGC P+ KTFE+++ GL
Sbjct: 184 FVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKTFEIVIKGL 243

Query: 247 ITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVT 306
           I  D VD++V +L  M ++GC  +LSFY   I LFCREDR++ G  LFR MK SN  P +
Sbjct: 244 IANDRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFTPDS 303

Query: 307 LIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD 366
            IY  LIQ LCK L LDEA+ LLEEM+ES L  ++NV+V ++  F +LGK +EA+K ++D
Sbjct: 304 FIYGALIQCLCKQLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLLED 363

Query: 367 RCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAF 426
           +    T+ HNALL  C DA K  +A  +L +MS+ NIDDC SWNI+I WLC    +  A+
Sbjct: 364 KHVLETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDDCDSWNILIRWLCEREEMVKAY 423

Query: 427 EFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGL 486
           E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+CWIL+   YSELIEGL
Sbjct: 424 ELLGRMIISSLIPDYATYSALVAGNCRLSKYEDALQLFLQLHAKCWILDPASYSELIEGL 483

Query: 487 CQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKT 546
           C+  + LEA +VFCYMS+NR  L    F  LIKG+CD+G I E + L  LA  +GTSC  
Sbjct: 484 CRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKGICDMGMIGEAVRLQSLAYNSGTSCVN 543

Query: 547 VTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNH 606
            TY  +M  LSKS +    L  LS+MLV G +LN E Y ILI S  A NR+K+  +  N 
Sbjct: 544 ATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLNTEAYCILIQSLIAQNRIKDCSMFLNV 603

Query: 607 MVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDR 666
           M+ +GL+PDS+ LY+L  C+A HSQL++IS ++DKL +  +++++A YN+LING+WKE  
Sbjct: 604 MINKGLVPDSDTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYNILINGMWKEGN 663

Query: 667 KHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGLG 726
           K++A +LLD MLEKGWVPDAMTHGLLIGS   E+ G+ +L       +D V  IL EGLG
Sbjct: 664 KNDARRLLDLMLEKGWVPDAMTHGLLIGSADMEEKGEGMLAYVDLSTKDGVGDILAEGLG 723

BLAST of Lsi03G017990.1 vs. TrEMBL
Match: B9I6D0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 3.2e-193
Identity = 361/722 (50.00%), Postives = 496/722 (68.70%), Query Frame = 1

Query: 7   PSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQ---STQFLSDKSVSNNSV 66
           PSTL K I K +   S +S +     +    E NQN P         Q L +K   +  +
Sbjct: 4   PSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDYLI 63

Query: 67  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 126
           K L +  ++NS V++FK  ++Q+ F  T  TYY  I KLG+  N+EEME  C+++V + C
Sbjct: 64  KVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKDRC 123

Query: 127 SGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVL 186
            GVE+V+++LV+AFVR+ R  EALRVL +++L G+KPS++ FN VL   VEE R  Q+V+
Sbjct: 124 PGVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVV 183

Query: 187 FVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGL 246
           FVYKEMVKAG+ P++DTLN+LL  LF  +++ +A++Q+RR++KKGCIPNS+TFE+++ GL
Sbjct: 184 FVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRTFEIVIKGL 243

Query: 247 ITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVT 306
           I K+ VD++V +L  M ++GC  +L F+   I LFC EDR+  G  LFR MK SN  P  
Sbjct: 244 IAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFTPDP 303

Query: 307 LIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD 366
            IY  LIQ LCK+L LDEA  LLEEM+ES L P++NV+V I+  F +LGK +EAIK ++D
Sbjct: 304 FIYGALIQCLCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLLED 363

Query: 367 RCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAF 426
           +    T+ HNALL  C DA K  +A  +L +MS+ NIDDC SWNI+I WLC    + NA+
Sbjct: 364 KHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERNIDDCDSWNILIRWLCEKVGVMNAY 423

Query: 427 EFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGL 486
           E LG+MI+ S +P+  TY+AL+ GNC+  +YE ALQL  ++HA+ WIL+   YSELIEGL
Sbjct: 424 ELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSELIEGL 483

Query: 487 CQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKT 546
           C+  + LEA +VFCYMS+NR  L    F+ LI+G+C++G ++E + L  L   +GTSC  
Sbjct: 484 CRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSCSN 543

Query: 547 VTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNH 606
            T   IM  LSKS+K +  L  LSQMLV G +L++E Y ILI S  A  ++K+  L  N 
Sbjct: 544 ATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFLNV 603

Query: 607 MVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDR 666
           MV EGL+PDS+ LY L  C+ANHSQL++IS ++DKL++  +++++A YN+LINGLWKE  
Sbjct: 604 MVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKEGN 663

Query: 667 KHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGLG 726
           K+EA +LLD MLEKGWVPD+MTHGLLIGS  +E TG   L    S I+D+VS ILVEGLG
Sbjct: 664 KNEAHRLLDLMLEKGWVPDSMTHGLLIGSGNREGTGKGKLTYVDS-IKDSVSDILVEGLG 723

BLAST of Lsi03G017990.1 vs. TrEMBL
Match: A0A067JKK4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23171 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 4.6e-192
Identity = 342/704 (48.58%), Postives = 491/704 (69.74%), Query Frame = 1

Query: 22  SCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNLNSEVEIFKC 81
           SC + I     +D  +EN+ +    +   QFL DK   ++ +K L +  +++S V+IFK 
Sbjct: 25  SCTNSIQINPEIDQSIENSLDF---EAKIQFLRDKLYPDSLIKVLKSTNDISSAVKIFKW 84

Query: 82  LAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHG 141
            ++QK F  T  TYY  ILKLG+ GN+ E+E  C++LV +G  GV+ V+V L+ +FVRH 
Sbjct: 85  ASLQKRFNHTADTYYWIILKLGMAGNVGEVEGFCQNLVRDGSPGVDYVLVLLIESFVRHR 144

Query: 142 RTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTL 201
           R  EA+ +L +++L G KPS+  FNV+L   VEE R  QEV+FVYKEMVKA + PNVDTL
Sbjct: 145 RLNEAICILVNMNLGGYKPSINIFNVILGALVEERRGFQEVVFVYKEMVKARVAPNVDTL 204

Query: 202 NFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYK 261
           N+LL  LF  +++ +A++Q+RR++KKGC PN KTFE+++ GLI    VD+A+++L  M K
Sbjct: 205 NYLLEILFEIDKVSSALDQYRRINKKGCSPNCKTFEIVIKGLILNKQVDDAIIILDEMQK 264

Query: 262 IGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDE 321
           +GC  +L+FYTC I LFCRE++++    LFRMM+ SN+VP + IY  LIQ LCKNL LD+
Sbjct: 265 VGCLPELNFYTCIIPLFCRENKLEEAIRLFRMMQTSNLVPNSFIYEALIQCLCKNLQLDD 324

Query: 322 ALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDDRCAFYTASHNALLEGCSD 381
            L LL++MV++ L P+ NV V I+  F  LGK D+A+KF++D+    T+ HNALLEGC D
Sbjct: 325 VLTLLDKMVQNCLTPDKNVLVDIVNGFCRLGKIDKAVKFLEDKLILETSPHNALLEGCCD 384

Query: 382 AGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTY 441
           AG+  LA   L +MSK  + DC SWNI+I WLC  A +  A E LG+MIV S VPN  TY
Sbjct: 385 AGRFFLAKDQLEKMSKRTVADCDSWNILIRWLCKKADVKKAHELLGRMIVSSLVPNCATY 444

Query: 442 AALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSK 501
           +AL++G C+  ++E ALQL  ++ A+ W+L++  YS+LIEGLC+  + LEA EVF YM  
Sbjct: 445 SALVIGLCRLSKFEDALQLFLQLQAKSWVLDSLSYSDLIEGLCRVEKYLEATEVFHYMFS 504

Query: 502 NRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEI 561
           NR PL    F  L+KG+C+ G ++E + LLQ+A  +G SC   TY +IM  LSK+++   
Sbjct: 505 NRCPLQSFSFSLLVKGICNKGMVNEAVSLLQMAFDSGISCDNATYNNIMLGLSKTDEGRN 564

Query: 562 TLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDSERLYDLFL 621
            L+ LSQMLV G +L+ E Y ILI S  A N++K+  L+FN M+ EGL+PDS+ L+++  
Sbjct: 565 LLVFLSQMLVKGCNLDAEAYCILIKSMIARNQIKDCALIFNTMINEGLVPDSDMLHNMLS 624

Query: 622 CIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHEACKLLDSMLEKGWVP 681
           C ANHS+LH+IS++ID+L+ +++++++  YN+L+ GLWKE  K+ A +LLD MLEKGW+P
Sbjct: 625 CFANHSKLHLISSSIDRLVPNSEVLDSTMYNMLVKGLWKEGNKNGARQLLDLMLEKGWIP 684

Query: 682 DAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGLGNS 726
           DA TH LLIGS+ + ++G+++L  E+  I+DNV  IL EGLG +
Sbjct: 685 DATTHRLLIGSVDRVESGEKMLTYENFTIKDNVLDILAEGLGKT 725

BLAST of Lsi03G017990.1 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 203.4 bits (516), Expect = 4.8e-52
Identity = 159/648 (24.54%), Postives = 298/648 (45.99%), Query Frame = 1

Query: 64  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 123
           K L+   N+++ +E+F     Q G+  +   Y   I KLG +G  + ++R    + +EG 
Sbjct: 83  KLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI 142

Query: 124 SGVEEVIVTLVNAFVRHGRTREALRVLPHI-SLVGLKPSVETFNVVLAVFVEENRDIQEV 183
              E + ++++  + + G   +  R++  + ++   +P+ +++NVVL + V  N   +  
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVA 202

Query: 184 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNG 243
             V+ +M+   I P + T   ++ A     +I +A++  R M+K GC+PNS  ++ L++ 
Sbjct: 203 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 262

Query: 244 LITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPV 303
           L   + V+EA+ +L  M+ +GC  D   +   I   C+ DRI+  + +   M      P 
Sbjct: 263 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 322

Query: 304 TLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVD 363
            + Y  L+  LCK   +D A  L   + +    PE  ++ ++I  F   G+ D+A   + 
Sbjct: 323 DITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLS 382

Query: 364 DRCAFY-----TASHNALLEGCSDAGKISLANCILGEMSKMNIDDCK----SWNIVIGWL 423
           D    Y       ++N+L+ G    G + LA  +L +M       CK    S+ I++   
Sbjct: 383 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGF 442

Query: 424 CNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNA 483
           C   +I  A+  L +M      PN   +  LI   CK  R   A+++  E+  +    + 
Sbjct: 443 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 502

Query: 484 GCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQL 543
             ++ LI GLC+ +    A  +   M       +   ++TLI      G I E   L+  
Sbjct: 503 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 562

Query: 544 ACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNR 603
             + G+    +TY S++  L ++ + +    +  +ML  G++ +  +  ILI+       
Sbjct: 563 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 622

Query: 604 VKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNL 663
           V+E++     MV  G  PD      L   +    ++    T   KL       +T T+N 
Sbjct: 623 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 682

Query: 664 LINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDR 702
           L++ L K    ++AC LLD  +E G+VP+  T  +L+ S++ ++T DR
Sbjct: 683 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722

BLAST of Lsi03G017990.1 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 182.6 bits (462), Expect = 8.8e-46
Identity = 159/658 (24.16%), Postives = 292/658 (44.38%), Query Frame = 1

Query: 40  NQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNL---NSEVEIFKCLAIQKGFFQTVQTYY 99
           N   P S  S       ++S+  VK LD+ ++    ++ + +F   + +  F      Y 
Sbjct: 28  NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87

Query: 100 ETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPH-ISL 159
           E +L+LG  G+ ++M++   D+ +  C       + L+ ++ +     E L V+   I  
Sbjct: 88  EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147

Query: 160 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 219
            GLKP    +N +L + V+ N  ++ V   + +M   GI P+V T N L+ AL  A Q++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 207

Query: 220 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 279
            A+     M   G +P+ KTF  ++ G I +  +D A+ +   M + GC          +
Sbjct: 208 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 267

Query: 280 SLFCREDRI-DVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGL 339
             FC+E R+ D  +++  M       P    ++TL+  LCK   +  A+ +++ M++ G 
Sbjct: 268 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 327

Query: 340 MPEDNVYVSIIKAFFELGKTDEAIKFVDDR----CAFYTASHNALLEGCSDAGKISLANC 399
            P+   Y S+I    +LG+  EA++ +D      C+  T ++N L+       ++  A  
Sbjct: 328 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 387

Query: 400 ILGEM-SKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNC 459
           +   + SK  + D  ++N +I  LC       A E   +M      P+E TY  LI   C
Sbjct: 388 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 447

Query: 460 KSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPS 519
              + + AL ++ ++       +   Y+ LI+G C+AN+T EA E+F  M  +    +  
Sbjct: 448 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 507

Query: 520 LFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQM 579
            ++TLI G+C    +++   L+      G      TY S++    +    +    ++  M
Sbjct: 508 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 567

Query: 580 LVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEG--LLPDSER--LYDLFLCIAN 639
              G   ++ TY  LI       RV+ +  L   +  +G  L P +    +  LF     
Sbjct: 568 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 627

Query: 640 HSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRK-HEACKLLDSMLEKGWVPD 683
              +++    +++     D V   +Y ++  GL        EA   L  +LEKG+VP+
Sbjct: 628 TEAINLFREMLEQNEAPPDAV---SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

BLAST of Lsi03G017990.1 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 180.3 bits (456), Expect = 4.4e-45
Identity = 129/463 (27.86%), Postives = 221/463 (47.73%), Query Frame = 1

Query: 156 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 215
           +G+  ++ T+++++  F   ++ +   L V  +M+K G  P++ TLN LL    H  +I 
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169

Query: 216 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 275
            A++   +M + G  P+S TF  L++GL   +   EAV ++  M   GC+ DL  Y   +
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229

Query: 276 SLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLM 335
           +  C+   ID+   L + M+   I P  +IY+T+I +LC   ++++AL L  EM   G+ 
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289

Query: 336 PEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFYTASHNALLEGCSDAGKISLANCI 395
           P    Y S+I+     G+  +A + + D    +      + +AL++     GK+  A  +
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349

Query: 396 LGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCK 455
             EM K +ID D  +++ +I   C + R+  A      MI     PN  TY  LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409

Query: 456 SKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSL 515
           +KR +  ++L  E+  R  + N   Y+ LI G  QA     A  VF  M  +        
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469

Query: 516 FDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQML 575
           +  L+ G+C+ G ++  LV+ +    +       TY  ++  + K+ K E    +   + 
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529

Query: 576 VLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDS 614
           + G   N+ TY  ++  F      +E+  LF  M  EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

BLAST of Lsi03G017990.1 vs. TAIR10
Match: AT4G19440.1 (AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 9.8e-45
Identity = 159/617 (25.77%), Postives = 284/617 (46.03%), Query Frame = 1

Query: 76  VEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCR--DLVNEGCSGVEEVIVTL 135
           +++F  LA  KG F +  T    +  L       E ++ C   D+V +G S    +  T 
Sbjct: 211 LDVFPVLA-NKGMFPSKTTCNILLTSLV---RANEFQKCCEAFDVVCKGVSPDVYLFTTA 270

Query: 136 VNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKE-MVKA 195
           +NAF + G+  EA+++   +   G+ P+V TFN V+       R   +  F++KE MV+ 
Sbjct: 271 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEKMVER 330

Query: 196 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 255
           G+ P + T + L+  L  A++I  A    + M+KKG  PN   +  L++  I    +++A
Sbjct: 331 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 390

Query: 256 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 315
           + +  +M   G  L  S Y   I  +C+  + D    L + M +         ++++I  
Sbjct: 391 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 450

Query: 316 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIK----FVDDRCAFY 375
           LC +L  D AL  + EM+   + P   +  ++I    + GK  +A++    F++      
Sbjct: 451 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 510

Query: 376 TASHNALLEGCSDAGKISLANCILGE-MSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLG 435
           T + NALL G  +AGK+  A  I  E + +  + D  S+N +I   C   ++  AF FL 
Sbjct: 511 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 570

Query: 436 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 495
           +M+     P+  TY+ LI G     + E A+Q  ++      + +   YS +I+G C+A 
Sbjct: 571 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 630

Query: 496 RTLEAAEVFC-YMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTY 555
           RT E  E F   MSKN  P +  +++ LI+  C  G +   L L +   + G S  + TY
Sbjct: 631 RTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 690

Query: 556 ASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVY 615
            S++  +S  ++ E   L+  +M + G   N+  Y  LI  +  + ++ +   L   M  
Sbjct: 691 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 750

Query: 616 EGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHE 675
           + + P+      +    A    +   S  ++++     + ++ TY   I G  K+    E
Sbjct: 751 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 810

Query: 676 ACKLLD----SMLEKGW 680
           A K  D    + + +GW
Sbjct: 811 AFKGSDEENYAAIIEGW 820

BLAST of Lsi03G017990.1 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-43
Identity = 127/486 (26.13%), Postives = 231/486 (47.53%), Query Frame = 1

Query: 133 LVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKA 192
           L++A  +  +    + +   +  +G+  +  T+++++  F   ++ +   L V  +M+K 
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ-LPLALAVLGKMMKL 146

Query: 193 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 252
           G  PN+ TL+ LL    H+++I  A+    +M   G  PN+ TF  L++GL   +   EA
Sbjct: 147 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 206

Query: 253 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 312
           + ++  M   GC+ DL  Y   ++  C+    D+   L   M+   + P  LIY+T+I  
Sbjct: 207 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 266

Query: 313 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFY 372
           LCK   +D+AL L +EM   G+ P    Y S+I      G+  +A + + D    +    
Sbjct: 267 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 326

Query: 373 TASHNALLEGCSDAGKISLANCILGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLG 432
             + +AL++     GK+  A  +  EM K +ID    +++ +I   C + R+  A +   
Sbjct: 327 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 386

Query: 433 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 492
            M+     P+  TY  LI G CK KR E  +++  E+  R  + N   Y+ LI+GL QA 
Sbjct: 387 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 446

Query: 493 RTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYA 552
               A E+F  M  +  P +   ++TL+ G+C  G +++ +V+ +    +       TY 
Sbjct: 447 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 506

Query: 553 SIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYE 612
            ++  + K+ K E    +   + + G   ++  Y  +I  F      +E+  LF  M  +
Sbjct: 507 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 566

Query: 613 GLLPDS 614
           G LP+S
Sbjct: 567 GTLPNS 571

BLAST of Lsi03G017990.1 vs. NCBI nr
Match: gi|449437884|ref|XP_004136720.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 653/728 (89.70%), Postives = 694/728 (95.33%), Query Frame = 1

Query: 1   MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
           MAAR MPSTL+KK LKGV+PNSCLSPILSGIHVDTFLENNQNCPR KQSTQFLSDKSVSN
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60

Query: 61  NSV---KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
           NSV   KGLD DKNLNSEVEIFK LAIQKG FQ+VQTYYETILKLGLDGNIEEME TCRD
Sbjct: 61  NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120

Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
           LVNEGCSGVEEVIVTLVN  VR GR REALRVLPHISLVGL+PSVETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180

Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
           DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
           VL+NGLITK+LVDEAVLVLGIMYKI C+L LSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
           NIVP TLIYSTLIQSLCK+LSLD+ALFLLEEMVE+GL+PE++VYVSI++ FFELGKTDEA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360

Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
           IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
           +IGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYEAALQLMNEVH+RCWILNAGCYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480

Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
           ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIKGMCDLG++DE LVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540

Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
           GTSCK+VTYASI+HELSKSNKAE  LLVLSQMLVLG +L+LETYYILIHSFS++NRVKES
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600

Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
           ILLFNHMV E LLPDSERLYDLFLCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
           LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGD++LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720

Query: 721 LVEGLGNS 726
           LVEGLGNS
Sbjct: 721 LVEGLGNS 728

BLAST of Lsi03G017990.1 vs. NCBI nr
Match: gi|659084558|ref|XP_008442951.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 637/728 (87.50%), Postives = 683/728 (93.82%), Query Frame = 1

Query: 1   MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
           MAAR MPSTL+KK LKGV+PNS LSPILSGIHVDT LENNQNCPR KQSTQF SDKSV+N
Sbjct: 1   MAARLMPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTN 60

Query: 61  NSV---KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
           NSV   KGLD DK LNSEVEIFKCLAIQKGFF+TVQTYYETI+KLGL+GNI+EMERTCRD
Sbjct: 61  NSVNSVKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRD 120

Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
           LVNEGCSGVEE+IV+LVN  VR GR REAL V PHIS VGL+PSVETFNVVLAVFVEE+R
Sbjct: 121 LVNEGCSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDR 180

Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
           DIQEVLFVYKEMVKAGIVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240

Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
           VL+N LITK+LVDEAVLVLGIMYK  C+LDLSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNALITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300

Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
           NIVP TLIY+TLIQSLCK+LSLD+ALFLLEEMVESGL+PE++VYVSII+ FFELGKTDEA
Sbjct: 301 NIVPGTLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEA 360

Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
           IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420

Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
           RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYE ALQLMNEVH++CWILNAGCYS
Sbjct: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYS 480

Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
           ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIK MCDLG++DETLVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYA 540

Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
           GTSCKTVTYASI+HELSK+NKA   LLVLSQMLVLG +L+LETYYILIHSFS++NRV ES
Sbjct: 541 GTSCKTVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNES 600

Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
           ILLFN MV E LLPDSE LY+L LCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNCMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660

Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
           LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGDR+LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDNVSSI 720

Query: 721 LVEGLGNS 726
           LVEGLGNS
Sbjct: 721 LVEGLGNS 728

BLAST of Lsi03G017990.1 vs. NCBI nr
Match: gi|595842090|ref|XP_007208344.1| (hypothetical protein PRUPE_ppa002033mg [Prunus persica])

HSP 1 Score: 707.2 bits (1824), Expect = 2.9e-200
Identity = 365/719 (50.76%), Postives = 502/719 (69.82%), Query Frame = 1

Query: 7   PSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRS---KQSTQFLSDKSVSNNSV 66
           P T  K+I   V   +C+S       V+ F   NQ+ P S   +Q+ Q L +K V +N +
Sbjct: 4   PLTFSKRIPFWVCSGACISSASCAKTVECFPGKNQDPPNSSDFEQNIQSLRNKLVPDNLI 63

Query: 67  KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 126
           + LDN  +L+S V++FK  ++Q+ F  T  TYY  ILKLGL G +EEME  C+++V + C
Sbjct: 64  RVLDNTDDLSSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQNMVKDKC 123

Query: 127 SGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVL 186
            GVEE ++ LV+ FV+H R  EA+RVL ++   G +PS+ETFN VL   VE+ RD Q+VL
Sbjct: 124 PGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPSIETFNAVLGALVEDKRDFQDVL 183

Query: 187 FVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGL 246
           FVYKEMV AGI+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFE+L+   
Sbjct: 184 FVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNCRTFEILIKAH 243

Query: 247 ITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVT 306
           I K  VDEAV+VL  M ++GC+ DLSFY+  I LFC+ +R + G  LF MM+ASN +P +
Sbjct: 244 IAKGRVDEAVIVLSEMLELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRASNFMPDS 303

Query: 307 LIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD 366
           LI   L+Q LCKNL L++A+ +LE+M+E+GL P ++V+  ++  F +LGK D+A+KF++D
Sbjct: 304 LICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDVFADVVNVFCKLGKIDDAMKFLED 363

Query: 367 RCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIGNAF 426
           +    T+  N LLEGC  AGK  +A  +L +MS+ ++ DC SWNI+I WLC N+RI  A 
Sbjct: 364 KHILETSVCNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENSRIRVAS 423

Query: 427 EFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGL 486
           E LG+M+V S +P+  TY+AL++GNCK   Y  AL L + + A+ W+L+   YSEL++GL
Sbjct: 424 EILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHIRAKSWVLDPTSYSELVKGL 483

Query: 487 CQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKT 546
           C    T EA EVFCYMS NR  +  S F+ LIKG+C+ G +DE + L +LA Y+GTS  +
Sbjct: 484 CLVEMTHEATEVFCYMSSNRCSIQSSSFNMLIKGVCETGKVDEAIRLQKLAYYSGTSSTS 543

Query: 547 VTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNH 606
            TY++IM  LSK + A+  L+VLS+MLV G +L+L+ Y ILI S S  NRVKE ILLF  
Sbjct: 544 STYSAIMFGLSKVDNAKDLLVVLSKMLVEGCNLDLDAYCILIQSMSLQNRVKECILLFRM 603

Query: 607 MVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDR 666
           MV +GL+PDSERL++L  CIAN SQLH+IS +IDKL + ++ +N+A YN+LINGLWKE  
Sbjct: 604 MVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSEALNSAIYNVLINGLWKEGY 663

Query: 667 KHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVEGL 723
           KHEAC+LLD MLEKGWVPDA THGLLIGS V E+    +L  ++  ++D VS+ILVEGL
Sbjct: 664 KHEACRLLDIMLEKGWVPDAKTHGLLIGSAVSEEVDWNVLDYDNCTVQDTVSNILVEGL 722

BLAST of Lsi03G017990.1 vs. NCBI nr
Match: gi|645221848|ref|XP_008246311.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial [Prunus mume])

HSP 1 Score: 705.7 bits (1820), Expect = 8.5e-200
Identity = 364/725 (50.21%), Postives = 502/725 (69.24%), Query Frame = 1

Query: 1   MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRS---KQSTQFLSDKS 60
           M  +  P T  K+I   V   +C+S       V+ F  NNQ+ P S   +Q+ Q L +K 
Sbjct: 1   MLVKLQPLTFSKRIPFWVCSGACISSASCAKTVECFPGNNQDPPNSSDFEQNIQSLRNKL 60

Query: 61  VSNNSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
           V +N ++ LDN  +L S V++FK  ++Q+ F  T  TYY  ILKLGL G +EEME  C++
Sbjct: 61  VPDNLIRVLDNTDDLGSAVKVFKWASLQRRFNHTADTYYRIILKLGLAGKVEEMEGFCQN 120

Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
           +V + C GVEE ++ LV+ FV+H R  EA+RVL ++   G +P +ETFN VL   VE+ R
Sbjct: 121 MVKDKCPGVEEALLALVDMFVKHCRQSEAIRVLVNMKAGGYRPPIETFNAVLGSLVEDKR 180

Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
           D Q+VLFVYKEMV AGI+P ++TLN+LL AL   + I++A+ Q+RRM KKGC PN +TFE
Sbjct: 181 DFQDVLFVYKEMVTAGILPTIETLNYLLEALLETDHIESALGQYRRMKKKGCSPNGRTFE 240

Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
           +L+  LI K  VDE V+VL  M ++GC+ DLSFY+  I LFC+ +R + G  LF MM+AS
Sbjct: 241 ILIKALIAKGRVDEGVIVLSEMPELGCQPDLSFYSTLIPLFCQNNRPEEGIRLFEMMRAS 300

Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
           N +P +LI   L+Q LCKNL L++A+ +LE+M+E+GL P ++ +  ++  F +LGK D+A
Sbjct: 301 NFMPDSLICGVLLQCLCKNLCLNDAIKVLEDMMETGLTPANDAFADVVNVFCKLGKIDDA 360

Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
           +KF++D+    T++ N LLEGC  AGK  +A  +L +MS+ ++ DC SWNI+I WLC N+
Sbjct: 361 MKFLEDKHILETSACNVLLEGCCSAGKFLMAKDLLVKMSESDVADCNSWNILIRWLCENS 420

Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
           RI  AFE LG+M+V S +P+  TY+AL++GNCK   Y  AL L + V A+ W+L+   YS
Sbjct: 421 RISVAFEILGRMVVSSSLPDCATYSALVIGNCKMSNYRNALDLFHHVRAKSWVLDPTSYS 480

Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
           EL++GLC    T EA EVFCYMS NR  +  S F+ LIKG+C+ G +DE + L +LA Y+
Sbjct: 481 ELVKGLCLVEMTHEATEVFCYMSSNRCSIRSSSFNMLIKGVCETGKVDEAIRLQKLAYYS 540

Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
           GTS  + TY++IM  LSK +KA+  L+VLS+MLV G +L+L+ Y ILI S S  NRVKE 
Sbjct: 541 GTSSTSSTYSAIMLGLSKLDKAKDLLVVLSKMLVEGSNLDLDAYCILIQSMSLQNRVKEC 600

Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
           +LLF  MV +GL+PDSERL++L  CIAN SQLH+IS +IDKL + +  +N+A YN+LING
Sbjct: 601 LLLFRMMVNKGLIPDSERLFNLLSCIANLSQLHVISDSIDKLASSSKALNSAIYNVLING 660

Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
           LWKE  K EAC+LLD MLEKGWVPDA THGLLIGS V ++    +L  ++  ++D VS+I
Sbjct: 661 LWKEGYKLEACRLLDIMLEKGWVPDAKTHGLLIGSAVSQEVDWNVLDYDNCTVQDTVSNI 720

Query: 721 LVEGL 723
           L EGL
Sbjct: 721 LAEGL 725

BLAST of Lsi03G017990.1 vs. NCBI nr
Match: gi|1009176889|ref|XP_015869671.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus jujuba])

HSP 1 Score: 705.7 bits (1820), Expect = 8.5e-200
Identity = 362/724 (50.00%), Postives = 503/724 (69.48%), Query Frame = 1

Query: 1   MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCP--RSKQSTQFLSDKSV 60
           MA +    TL K+    V P++ +S I     V+ F E+NQ+ P   S+     L +   
Sbjct: 1   MAVKLSSLTLSKRNPIWVSPSAWISSISCARTVENFPESNQDHPPNSSQFEVNILRNNLA 60

Query: 61  SNNSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDL 120
            +N ++ LD+  +L++ V++FK  ++QK F  T  TYY  ILKLGL G ++EME  C+++
Sbjct: 61  PDNLIRVLDSTNDLSAAVKVFKWASLQKRFSHTADTYYRVILKLGLAGRVQEMEGFCQNM 120

Query: 121 VNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRD 180
           V + C G +E +  LV+ FV+H R  EA+ VL +++  G  PS+ETFN V+  FV+E RD
Sbjct: 121 VKDRCIGGKEALTALVDTFVKHCRIDEAVLVLVNMNSGGYNPSIETFNSVMGAFVKEKRD 180

Query: 181 IQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEV 240
           +QEVLF+YKE+VKAG +P +DTLN+LL ALF  + +++A++QF+RM+KKGC PNS++FE+
Sbjct: 181 LQEVLFIYKEIVKAGNLPTIDTLNYLLEALFETDHVESALDQFKRMNKKGCSPNSRSFEI 240

Query: 241 LLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASN 300
           L+ GLI K  VDEAV VL  M++  C  ++SF++C I LFC E++ ++G  LFRMMK  N
Sbjct: 241 LIKGLIAKSRVDEAVSVLNEMFESRCLAEMSFFSCTIPLFCLENKPEIGIKLFRMMKDCN 300

Query: 301 IVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAI 360
            VP +L Y+ L++ LC NL LD+ + L+EEM E+GL   D  YV +I  F  LGK D+AI
Sbjct: 301 FVPDSLTYAVLVRCLCDNLWLDDVINLIEEMTEAGLTLPDTAYVDVINMFSRLGKFDQAI 360

Query: 361 KFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNAR 420
           KF++D     T++HN LLEGC  AGK+ +A  +L +M++ NIDDC SWNI++  +C    
Sbjct: 361 KFLEDNHVLETSAHNVLLEGCCSAGKLCMAKHLLEKMAERNIDDCDSWNILVRCVCEQEG 420

Query: 421 IGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSE 480
              A + +G+M+VLSF+P+  TY+AL+ GNCK  +YE AL+L  ++ A+CW+LN+  YS+
Sbjct: 421 SRKASQLIGRMVVLSFIPDCATYSALVTGNCKLSKYEDALKLFYQIQAKCWVLNSVSYSK 480

Query: 481 LIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAG 540
           LIEGLC   R +EAAEVFCYMS+  Y L  SLF+ LIKG+C LG +DE + L + ACY+G
Sbjct: 481 LIEGLCHVGRIVEAAEVFCYMSRKGYSLGSSLFNLLIKGVCSLGKVDEAIRLRRWACYSG 540

Query: 541 TSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESI 600
           TSC + TY +IM  LSK NK +  LLV SQMLV G  L+LE Y ILI + S  NR+K S+
Sbjct: 541 TSCTSSTYTTIMIGLSKENKGKDLLLVHSQMLVEGCGLDLEAYCILILNMSLQNRIKYSV 600

Query: 601 LLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGL 660
           LLFN MV EGL+P SE+L ++  CIA+ SQL MIS +IDKLI++ +++N + YNLLINGL
Sbjct: 601 LLFNMMVEEGLIPKSEKLLEILSCIADQSQLCMISCSIDKLISNCEIMNPSIYNLLINGL 660

Query: 661 WKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSIL 720
            KE  KHEAC+LLD MLEKGWVPD+ THGLLIGS+V  +     L   +S+++D VS+IL
Sbjct: 661 LKEGNKHEACRLLDLMLEKGWVPDSKTHGLLIGSVVSGEPDSCALAYGNSIMQDTVSNIL 720

Query: 721 VEGL 723
            EGL
Sbjct: 721 SEGL 724

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP444_ARATH8.6e-5124.54Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PP281_ARATH1.6e-4424.16Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PPR99_ARATH7.8e-4427.86Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
PP325_ARATH1.7e-4325.77Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... [more]
PPR91_ARATH3.3e-4226.13Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LE83_CUCSA0.0e+0089.70Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782810 PE=4 SV=1[more]
M5WJY3_PRUPE2.0e-20050.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002033mg PE=4 SV=1[more]
B9N416_POPTR6.8e-19649.45Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00500g PE=4 SV=1[more]
B9I6D0_POPTR3.2e-19350.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s00430g PE=4 SV=1[more]
A0A067JKK4_JATCU4.6e-19248.58Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23171 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G64320.14.8e-5224.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.18.8e-4624.16 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63130.14.4e-4527.86 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G19440.19.8e-4525.77 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62670.11.8e-4326.13 rna processing factor 2[more]
Match NameE-valueIdentityDescription
gi|449437884|ref|XP_004136720.1|0.0e+0089.70PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic-... [more]
gi|659084558|ref|XP_008442951.1|0.0e+0087.50PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-... [more]
gi|595842090|ref|XP_007208344.1|2.9e-20050.76hypothetical protein PRUPE_ppa002033mg [Prunus persica][more]
gi|645221848|ref|XP_008246311.1|8.5e-20050.21PREDICTED: putative pentatricopeptide repeat-containing protein At3g16710, mitoc... [more]
gi|1009176889|ref|XP_015869671.1|8.5e-20050.00PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Ziziphus ... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi03G017990Lsi03G017990gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi03G017990.1.CDS.1Lsi03G017990.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi03G017990.1Lsi03G017990.1-proteinpolypeptide


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 271..299
score: 0.067coord: 580..609
score: 0.079coord: 371..400
score: 0.45coord: 305..334
score: 2.6E-6coord: 405..431
score: 0.25coord: 440..464
score: 0.18coord: 476..502
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 196..243
score: 1.8E-10coord: 647..695
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 132..174
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 650..683
score: 1.2E-6coord: 164..198
score: 0.0016coord: 580..612
score: 0.0031coord: 305..336
score: 1.7E-5coord: 405..438
score: 5.8E-4coord: 475..503
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 302..336
score: 10.841coord: 368..398
score: 6.708coord: 232..266
score: 8.013coord: 161..196
score: 9.887coord: 126..160
score: 7.728coord: 472..506
score: 9.076coord: 437..471
score: 8.144coord: 337..367
score: 5.7coord: 267..301
score: 9.701coord: 577..611
score: 9.657coord: 402..436
score: 8.78coord: 507..541
score: 6.116coord: 197..231
score: 9.558coord: 647..681
score: 11.718coord: 542..576
score: 7.399coord: 91..125
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 51..357
score: 9.5E-212coord: 401..522
score: 9.5E-212coord: 558..688
score: 9.5E
NoneNo IPR availablePANTHERPTHR24015:SF804SUBFAMILY NOT NAMEDcoord: 51..357
score: 9.5E-212coord: 401..522
score: 9.5E-212coord: 558..688
score: 9.5E