Lsi03G017040.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G017040.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Far-red impaired responsive (FAR1) family protein
Location	chr03 : 28399757 .. 28405753 (-)
Sequence length	1246

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTGTAAAAATAGGAGGCTTGAGGAGGAATAAAGGGAAAAAGAAATATTATGTAAACATTGGGAAAGATAAACTTTGTTAAGGAGTGGTAGTGGTTGGTGTGGTTTTTGGAGGAAAAAAGTTTGTCTATTTGAATTTGGTTTGATTACTTAATGAGCAAAAACTTTGTTGAATTATATATGCTTACTCTTTTGCTATTTTAATTCATCTTTATCGTCATATATCTAATTTTTATTAATTTATCGATTATAAAATTTGAGTTAAACTTAAACGTAGCTTAGTAGATTAGACAAAATAAAGATTTATGAAATGTGATGAAAGATTTGAGATTCTCCACTTTTACGTTTATTGAATTCATATATAATCTTTTCTTGAAATATAATCTTAAATTTTAATATTACAATAATTATTAATCCATAAAATGTGATAGAAGATAAGAAAAGTAGCATATCAATAATTCAATATACATTATTACTTGATATGACCATATCATGAACATTAGGTTTCAATCTCTTAAATATGCCTAAGTACCGAAAATCTATAGGTTGAAGAATATTCTAATTTTATGGGAAAAAAGATCCTCAGATTTTACAAATAATGATTAAGTGCAGTTTTAGCTACACCTATCTCTCATTTTTTTTGTCACATGACCGTTTTTAAGAGAGTAACACTATAAAAAAGGGAGATTCGAAAATCATCTAAAAATATCAATATGCTTATATATACATTGATGGTAGTTTTGATGCTTCTATCCATGAATGGTAGGTAGGTTAGGAAGTTATTTTTTCGGTTCAAAGTTTAAAAAATATATTTTTTTTCTAGTTCAAATTTTGAAAATATTTTAGTATACATTTATGTTTCATAAATCTAAATTATTTAAGTGGTTTTGAATAATGGTACACTAGCATATTTTAATAATTTAGATTTTTTTTTTTTGAAATTATATTTTAGATTTCAGTTTGTTTGTTTGAAATTTATTATTTTGTTATATTCCAGTTATCCAATTACGAGATAATCTTAACCGTTTATAAAGTTTAATAATACCGATTTTCTTTTAATATAAAATCACTTTTAAAATATATTAGTTAATTTTAAAGCTTTTTGAATAGGCGTTAAAGATACACCAAATTTAAAATGGGTAATTGTAATAGAGACACTTTTAGGATTAATAATTAAGTATATAGTAAAATTTAAAAAAAAATTATAAATATAGCAAATTCTATAAGCGATAAGACTTTATATACTCTTATATAAACTCCGACAATTTGTACTAAATTTTACTAGAAGTGAACATTTGCAACTATTCTATTGAAATTAAAGAGTAATTGAAAGTTGGTCGAGTAGGTTATTATAGTCTAGGCTAGTTATTAAGAACTTACCATTAACTACAATATTACTATTTTAAATGTTTGCATTTGTTACTTTATTATTTTCTACCTTTTCTACACCGACTATTATAACCACGAGTAACTATAATAACTAACATCATTTTTATACTTCACGATCTCATTTCGTTCGGCCTTCGATTGTTTACGTATTCCCAATAATCTCATCACATTATAGCTCTTCAAACTGAGACTAAATTTTTACACAAATTTCTAATTGAAGAAAAGATGAAGTTGTTGATTGGACCACCTAAGTATTGGATCTAAGCCCAAAGTCCCATCCCATTACAAATCAACAACACATTACACAATAGACATCTCTGTTTCCAGTTTTCACCTTCTTATCTTTCCTTCCCTTCCTCTTCTTTCCTTTTTCGACTCCCATTTTCCTCCATTCTTAAACTCTTTTCTCGAAGCTTCTTTCACATTACTCCCAACCCAACAACAAACGCCGCTACTCTCTTTCTTTCTTCAGATTGCTTCTGCCCAATCAATTCTTCCATCTCTGACCACGGTATTGTTTCTCCTTCTTCTTCTTTTTCCTCTTTTGCCAATCCTCTGGGTTCCAGATTGAAGTTGCGATAACAGAATTGAATTGAATACGCTTGAAAACTGTATTCTTGTTCTGGGTTTCATTTTCTATTGGAAATTCAATTGTAATTTCTGTATACTGAACACAGAGGCCGAAATTTGCGTCACAGAGTCGACTCTAGTTTCCATTTTCGGTACTTGGGTGTGCCGCCATTTTTTGTTTGGATGATCTAAATTAGGAAATGGGTTATTTATATTTGACGTTTTATGTCAGTTGTTCTTTGTTTCTCTTCCATTGCTGATGGATTTTCCTTTCTGCCCTGATAATTCAGTCAAGAGGGATTTTTTCTTCTCTTTTTTCCCTTTTGTGCTTATAGAAATCAATGTGCGATCATCTTTCTTTCTTTTTTTACTTGCTTCCTGAGTGATTTAGTTATAAATAATGATAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGTCAGTGTTTCTCTTCCCCTATTGTTATCTTCAATCAAACATCATATGTAAGAGTAAGACTGTGTTCTTTACTAGTATGTTTTCTGATGAGGCCTAAAAATCAAGGATTGGAACTTGCTTTATGGAGACATATTTTGATTCTATTTGATGGATTGTTCAAGAGAATCAATTTTACTTTTTAAGGGAAATGGAAGTGAAAACATCTTTGCCTACCCACCCCATCAACTGCTTTATAGGGACTCATCAAATTCAAAGATTATGCATATTAACTGTAGTTGTTACCTTGCTTTTAGGGAGAAGCTTCTAGTTTCATCGACCATTCTGAGCTTTGCATTTTCCTACCAACCTGCAATGTTACACCCTATTTATTTTTCTCCATACTGAATTTGGCCTACATTTTAGTTTTATTATTATTATTATTATCATTTTCTTGCCCTTTTTCCTTGCATTATCATATCAACACATGGGTGATACTCATATGTGCCTTGGAAAATTAACTTCGTTGTTGAATGTGGATAAATGGAGGACGGAGGGTATTTTTTAGTTGTGCCCCTGTGCAGTTATGTCCTGGTCCAGTGTTTTGTTGGGTTTGCTTTATACACTCCTGGTTTCTTGCACCATCTTGAATTCTTTCTTTTTCATAATGGAAGTATTGTTTCGTATCTAGAAAAGATAGGGAATTAGTGTATGTAGTTGTGAGTGTTGAGTGTTAGGAAAAATTGTTCAGAGATGTCGCCACAGTGTGGCAGATAGTTTTGAAATGTTGGATGTTTTAAAGAAAAACTAAAAAGGTACCTCAAATATGTATTTAGTGGTATTAGGAAGCATATAGATTTTTAATCTATATCAAACAGTTATTAAGAGGCTTTGTGACAACCTCATTGAATAATTTTTCTTGTTAGAGTTTATTCACTTGATTTAACCATTCAAAGTCTGTGAGTCACATTTTAGAATTTAAGTTGTTGGGTTATCTCCATAGTGATAGACATCTCAATGGGTTTAGATGAAAAAGGAAGCAGAACTCATCAGTACTTGAACTTCCAATCTATCTAATAACTAATAGTTATGAAGCAAATTACATGTCAATTCCTTAGAAATGCCTAATAGACTCAATATGGGGTGTGTTGTTTTGGGAGACCTTTGGTTAGAAAGGAACAATAGAACCTTTCAAAGCTTAGAGAGGGTCCTTATGATGTTTAATCCCTTGCTAGGTTCTATGATTCTCTTTGGGTGTAGGTGAAGAAACCTTTTTGTAACTATACGTGAGGTCTTATTGTTCTAGATTGGAGACCCTTCCTTCAGTGGAAATTCCCTTTTGTGGGCTTGTATTTTTGGATGCTCTTGTTCTCGTTCCTTCTTTCTTAATGAAGGTTCAGTTCTTTATATATATGTAGACTCAATATGGCTATGGCCCTCTGTATTTTGTTATGAAATTCTTTAGGATGACGTGCCTTTCTTGCTTCTGTATCCTGGAATAAATTTCAATGAGCGGAATCTTCTTGAGACTGCCATCCCCCCTAAGCCAACTTGTTCTCCATTTTCAAACTTCCTACATCTCATCTCTGTATCTTCTTTGTTCCAGCCATTTGGAGTGCAGTAACCAGACAAATATGCACACATGAGTAGATGACAAATCAATAGAACTATTCAAAGTCTTAATACTCATGGCTATACTGGCAAAATTACTAAGAATCAAACAATCCCCTCCGCCCCAACAAAAAAATTAGGAAAACTACAATTTTTCGCACATACTAACTCAGGCTTCCCACCTCCCAGGCATGTCTGCCTCTTTTCACCAACTCATTCCTTCCAACACCTACCCATTATGTTTCCTAGCCTTCTCGTTGTATAGGTGAACTGCATTGATCTTTTCTATAACTTGATATGTTTTGATGCCTTACGTGATATGGTTGCGACTTTCGTACCAATTGCAATGCTCTGCATTTTCACCTCTAACTAAATGGATGGAACCATGTGGAACACCCACCTTGCATATTTAGTTGCTCATGAATATTCTACTATACTATGTTTATCCCTGGTTTGGGAAACTAGTAAACTGACAAGAGATTGGGAACTTTTCAACAAAAGATTAATAAAAAAAAGAAAAAAAATCCTCCACTAGAATGATAGAAGACATTAGAATGCTTTGTATGTTGATAGCTTAATTTTTTTCTGTGGGTGATTGACATATATTTATATTGTTGCATCATGATGAAAAATAATTGATTTTGGACTTCCCTTACAGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGGTAGCTTAGCCACCAAGTGAGTATCTGATTGCTACTTGACTACCCTTTCATTTTGAGTTTTTTTTACTGCATCAAAAGTATTTCTTATGTCATTAAGTACAACTAGATTCTTATGCAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAGAAAGGAGCAATGCAATATTTCTTCTGTGTATCATAGCAAGCACTGGCATGAAGTAGAAGTACTTGCAGACATCTCAGCGGAGAGACGAGTTTTGAATGAAGAGAGACGATTTCATTTACTCTATAAATGGATTTTATTGAATAACCAATGCAGTCTTTTCAGAAATTTTGCTGAAATTTCCTTTGCTTGTGTATATGTTTGCATCTGATACTGCAGTTGAATCATCCAAATCTTTCTAATGCCCACATGGCTATAATGACAAAAGCAAGAAGATTAGAATTGTTCC

mRNA sequence

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAGAAAGGAGCAATGCAATATTTCTTCTGTGTATCATAGCAAGCACTGGCATGAAGTAGAAGTACTTGCAGACATCTCAGCGGAGAGACGAGTTTTGAATGAAGAGAGACGATTTCATTTACTCTATAAATGGATTTTATTGAATAACCAATGCAGTCTTTTCAGAAATTTTGCTGAAATTTCCTTTGCTTGTGTATATGTTTGCATCTGATACTGCAGTTGAATCATCCAAATCTTTCTAATGCCCACATGGCTATAATGACAAAAGCAAGAAGATTAGAATTGTTCC

Coding sequence (CDS)

ATGGACATGAAGAAGTTGACCTGCGCCGTCCTCGTCGCTGCTGCCGCCGTGAGTGCTACTATGGCCTCTGGTGAAGGCCCGGCTTCGGCACCCGGCCCATCCTCCGACGCGGCTGCTGCTGCTTTGCCAACTGTTGGAGCCTTCATTGGTGCTTTCTTTGCATACTACTTTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGAGGAAGGGATAGAGGGAGGATCATTTGAGAGTCCAGCGGGAACAGAATTAATTGAATGTGATGGAGATATTATCCTTGAGCCTTATGAGGGAATGGAATTTGAATCAGAAGATGCTGCCAAGATTTTCTATGATAAGTATGCCCGTCAACTGGGATTTGTTATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGAATACTTGCCCGAAGACTTGGATGCAACAAAGAGGGATATTGTGTCAGCATCCGAGGTAAATTTGGGGCAGTTCGGAAGCCGCGGCCAAGCACACGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAATCTGGGAAATGGGTGATAACAAAATTTGTAAAGGAACATAACCATCCTCTTGTGGTTTCTCCTCGTGAAGCTCGACAGACCATGGATGAAAAAGACAAGCAAATACAGGAACTCACTATAGAGCTGCGGAATAAGAAACGGTTATGTTCGACATACCAAGAACAGCTTGCTGCATTTATGAAAATTGTTGAAGAGCATACCGATCAATTGTCGAGAAAAGTTCAAAATGTAGTTACTAACCTTAAAGAATTTGAGTCCATTGAGCAAGAAATATTGCATCCTAGTGTGGTCGGTGGCCATCGATATTTGGAGGTTGGTAGTGCACGAAGAACAACGACAACTCTTCAGAAAGCCCCTCAAAAGGCATTCTTTACAGTCTACCCTGCCCCGCTCCAAACTCAGAGCGAGCTATAG

Protein sequence

MDMKKLTCAVLVAAAAVSATMASGEGPASAPGPSSDAAAAALPTVGAFIGAFFAYYFERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHPSVVGGHRYLEVGSARRTTTTLQKAPQKAFFTVYPAPLQTQSEL

Homology

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BLAST of Lsi03G017040.1 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 80/209 (38.28%), Postives = 110/209 (52.63%), Query Frame = 1


Query: 72  GIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 131
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACDL-LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 132 SEKDGRILARRLGCNKEGY--CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 191
           S +DG I+ R+  C KEG+      R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 192 KFVKEHNHPLVVSP-----REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKI 251
            FVK+HNH LV        R  RQ        I  L       +R+ S   ++     K+
Sbjct: 169 GFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKV 228

Query: 252 VEEHTDQLSRKVQNVVTNLKEFESIEQEI 274
                D      +N + N ++ +SIE EI
Sbjct: 229 GFTEVD-----CRNYMRNNRQ-KSIEGEI 250

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BLAST of Lsi03G017040.1 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 1


Query: 86  LIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGC 145
           + E +GD  LEPY G+EF++ + A+ +Y+ YA + GF +R     RS  DG + +RR  C
Sbjct: 17  IAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVC 76

Query: 146 NKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPRE 205
           +KEG+ ++              +R GC A I V+   +GKWV+ +  KEHNH L     E
Sbjct: 77  SKEGFQLN--------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEE 126

Query: 206 ARQT 210
           A+ T
Sbjct: 137 AQTT 126

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BLAST of Lsi03G017040.1 vs. Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-16
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 1


Query: 91  GDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGY 150
           GD+ LEP  G++F++ +AA IFY +YA+ +GF   + + RRS+K    +  +  C++ G 
Sbjct: 45  GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGV 104

Query: 151 CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 201
                   G+  +     +  CKA +HVK    GKW+I +FVK+HNH L+
Sbjct: 105 TPESESS-GSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153

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BLAST of Lsi03G017040.1 vs. Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 56/162 (34.57%), Postives = 91/162 (56.17%), Query Frame = 1


Query: 94  ILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 153
           + E   GM+FES++AA  FY +YAR +GF + + + RRS++ G+ +  ++ C++ G   +
Sbjct: 35  VSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---T 94

Query: 154 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEK 213
            R K  A+  PR   + GCKA +H+K  +  KWVI  FVKEHNH   + P +   ++  K
Sbjct: 95  KREKATAI-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGK 154

Query: 214 DKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 256
           +K    L I    KK L    +E+    +K++ EH  ++  K
Sbjct: 155 NKPAGALAI----KKGLQLALEEE---DLKLLLEHFMEMQDK 183

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BLAST of Lsi03G017040.1 vs. Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.7e-15
Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 1


Query: 81  PAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILA 140
           P G EL+E    + LEP  GMEFES   A  FY +Y+R +GF   + + RRS+     + 
Sbjct: 55  PTG-ELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFID 114

Query: 141 RRLGCNKEG----YCVSIRGKFGAVRKPRPSTREG--------CKAMIHVKYDKSGKWVI 200
            +  C++ G    Y  S         K  P    G        CKA +HVK    GKWVI
Sbjct: 115 AKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVI 174

Query: 201 TKFVKEHNHPLVVSPREARQT 210
             FV+EHNH L+ +   + QT
Sbjct: 175 HSFVREHNHELLPAQAVSEQT 194

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BLAST of Lsi03G017040.1 vs. TrEMBL
Match: A0A0A0LBE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G811580 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.4e-114
Identity = 207/216 (95.83%), Postives = 212/216 (98.15%), Query Frame = 1


Query: 61  LLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQL 120
           L+ VDADEGEE IEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 67  LINVDADEGEEVIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 126

Query: 121 GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 180
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 127 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 186

Query: 181 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 240
           DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA
Sbjct: 187 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 246

Query: 241 FMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           FMKIVEEHTDQLS+KVQNVVTNLKEFESIEQE+LHP
Sbjct: 247 FMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHP 282

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BLAST of Lsi03G017040.1 vs. TrEMBL
Match: W9RFJ0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012164 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 6.9e-92
Identity = 172/210 (81.90%), Postives = 190/210 (90.48%), Query Frame = 1


Query: 64  VDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFV 123
           VD+DEG      G+ ES A   L+  +GD ILEP EGMEF+SEDAAKIFYD+YAR+LGFV
Sbjct: 22  VDSDEG-----AGAVESSAVHPLVPYEGDTILEPCEGMEFDSEDAAKIFYDEYARRLGFV 81

Query: 124 MRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKS 183
           MRVMSCRRSE+DGRILARRLGCNKEGYCVSIRGKFG VRKPRPSTREGCKAMIHVKYDKS
Sbjct: 82  MRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDKS 141

Query: 184 GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMK 243
           GKWVITKFVK+HNHPLVVS REARQTMDEKDK+IQELT+ELRNKKRLCSTYQEQL AF+K
Sbjct: 142 GKWVITKFVKDHNHPLVVSTREARQTMDEKDKKIQELTVELRNKKRLCSTYQEQLTAFIK 201

Query: 244 IVEEHTDQLSRKVQNVVTNLKEFESIEQEI 274
           IVEEH+DQLS+KVQNVV+NLKE E I+Q++
Sbjct: 202 IVEEHSDQLSKKVQNVVSNLKEIEPIDQDL 226

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BLAST of Lsi03G017040.1 vs. TrEMBL
Match: A0A061ERC2_THECC (Far-red impaired responsive (FAR1) family protein OS=Theobroma cacao GN=TCM_020035 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.5e-91
Identity = 170/211 (80.57%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 64  VDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFV 123
           +D DEG E IE  SF     T  + C+GD I+EP+EGMEFESEDAAKIFYD+YAR++GFV
Sbjct: 1   MDLDEGAEAIE--SFTG-GETVAVPCEGDSIVEPHEGMEFESEDAAKIFYDEYARRVGFV 60

Query: 124 MRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKS 183
           MRVMSCRRSE+DGRILARRLGCNKEGYCVSIRGKFG VRKPRPSTREGCKAMIH+K+DKS
Sbjct: 61  MRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHIKFDKS 120

Query: 184 GKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMK 243
           GKWVIT+FVK+HNHPLVV+PREARQTMDEKDK+IQELT ELRNKKRLC+ YQEQL AFMK
Sbjct: 121 GKWVITRFVKDHNHPLVVAPREARQTMDEKDKKIQELTAELRNKKRLCAAYQEQLTAFMK 180

Query: 244 IVEEHTDQLSRKVQNVVTNLKEFESIEQEIL 275
           IVEEH++QLS+KVQNVV NLKE+ESIE E+L
Sbjct: 181 IVEEHSNQLSKKVQNVVNNLKEYESIELELL 208

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BLAST of Lsi03G017040.1 vs. TrEMBL
Match: A0A067L617_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20862 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.4e-91
Identity = 170/218 (77.98%), Postives = 195/218 (89.45%), Query Frame = 1


Query: 64  VDADEGEEGIEGGSFESPAGTELIECDGDIIL-------EPYEGMEFESEDAAKIFYDKY 123
           +D DEG      G+ E+ AG EL+  +GDI++       EP+EGMEFESEDAAKIFYD+Y
Sbjct: 5   LDLDEGV-----GTGENSAGHELVVQEGDIVMQEGDSIVEPHEGMEFESEDAAKIFYDEY 64

Query: 124 ARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMI 183
           AR++GFVMRVMSCRRSE+DGRILARRLGCNKEGYCVSIRGKFG VRKPRPSTREGCKAMI
Sbjct: 65  ARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGNVRKPRPSTREGCKAMI 124

Query: 184 HVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQE 243
           HVK+DKSGKWVITKFVK+HNHPLVV+PREARQTMDEKDK+IQELT+ELRNKKRLC+TYQ+
Sbjct: 125 HVKFDKSGKWVITKFVKDHNHPLVVAPREARQTMDEKDKRIQELTMELRNKKRLCATYQD 184

Query: 244 QLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEIL 275
           QL AFMKIVEEH++QLS+KVQNV+ NLKEFES+E E+L
Sbjct: 185 QLTAFMKIVEEHSEQLSKKVQNVIRNLKEFESLEHELL 217

[Close]

BLAST of Lsi03G017040.1 vs. TrEMBL
Match: A0A0D2RKG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G128700 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.7e-90
Identity = 168/213 (78.87%), Postives = 192/213 (90.14%), Query Frame = 1


Query: 64  VDADEGEEGIEGGSFESPAGTELIE--CDGDIILEPYEGMEFESEDAAKIFYDKYARQLG 123
           +D DEG E IE     S  G E++   C+ D I+EP+EGMEFESEDAAKIFYD+YAR++G
Sbjct: 1   MDLDEGAEAIE-----SFTGGEILAFPCEADSIVEPHEGMEFESEDAAKIFYDEYARRVG 60

Query: 124 FVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYD 183
           FVMRVMSCRRSE+DGRILARRLGCNKEGYCVSIRGKFG VRKPRPSTREGCKAMIH+K++
Sbjct: 61  FVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHIKFN 120

Query: 184 KSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAF 243
           KSGKWVIT+FVKEHNHPLVV+PREARQTMDEKDK+IQELT+ELRNKKRLC+ YQEQL AF
Sbjct: 121 KSGKWVITRFVKEHNHPLVVAPREARQTMDEKDKKIQELTVELRNKKRLCAAYQEQLTAF 180

Query: 244 MKIVEEHTDQLSRKVQNVVTNLKEFESIEQEIL 275
           MKIVEEH++QLS+KVQNVV NLKE+ESIE ++L
Sbjct: 181 MKIVEEHSNQLSKKVQNVVNNLKEYESIEPQLL 208

[Close]

BLAST of Lsi03G017040.1 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 311.6 bits (797), Expect = 5.6e-85
Identity = 149/183 (81.42%), Postives = 169/183 (92.35%), Query Frame = 1


Query: 92  DIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYC 151
           D  +EP EG+ FESEDAAK+FYD Y+R+LGFVMRVMSCRRSEKDGRILARR GCNKEG+C
Sbjct: 17  DFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHC 76

Query: 152 VSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMD 211
           VSIRGKFG+VRKPRPSTREGCKAMIHVKYD+SGKWVITKFVKEHNHPLVVSPREAR T+D
Sbjct: 77  VSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLD 136

Query: 212 EKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQ 271
           EKDK+IQELTIELRNKKRLC+ Y+EQL AF KIVEEH++Q+++KV+NVV NLKEFE +E 
Sbjct: 137 EKDKRIQELTIELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEH 196

Query: 272 EIL 275
            +L
Sbjct: 197 ALL 199

[Close]

BLAST of Lsi03G017040.1 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 1


Query: 94  ILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVS 153
           ++EP+ GMEFESE+AAK FYD YA  +GFVMRV + RRS +DG ++ RRL CNKEG+  S
Sbjct: 30  MVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS 89

Query: 154 IRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV-VSPREAR----- 213
            R +    RKPR  TREGCKA+I VK +KSG W++TKF KEHNHPL+ +SP   R     
Sbjct: 90  -RPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLP 149

Query: 214 QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 269
           QT DEKD +I+EL+ EL  ++R C+  Q+QL   +K +EEH++ L+  + +V+ ++++ E
Sbjct: 150 QTPDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIE 209

[Close]

BLAST of Lsi03G017040.1 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 164.9 bits (416), Expect = 8.4e-41
Identity = 85/178 (47.75%), Postives = 127/178 (71.35%), Query Frame = 1


Query: 91  GDIIL-EPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG 150
           GD+ L EPY G++FESE+ AK FY +Y+++LGFV+R+M  RRS  DGR LARRLGCNK+G
Sbjct: 3   GDLKLDEPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQG 62

Query: 151 YCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQT 210
           +  + +    +      S+REGCKA I VK +KSGKWV+T+F+KEHNH L      +  +
Sbjct: 63  FGPNNQRSSSS----SSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS 122

Query: 211 MDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFE 268
             +K+++I+ELT E+  + RLC  Y+++L +F+  VE +T++LS KV+++V N+K+ E
Sbjct: 123 FADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176

[Close]

BLAST of Lsi03G017040.1 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 1


Query: 82  AGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILAR 141
           A  ++ E  GD   EPY G EFESE AA  FY+ YA ++GFV+RV    RS  DG  + R
Sbjct: 58  AVADMTEAQGD---EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGR 117

Query: 142 RLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVV 201
           +L CNKEGY   +  K   V + R  TR GCKAMI ++ + SGKWVITKFVKEHNH L+ 
Sbjct: 118 QLVCNKEGY--RLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM- 177

Query: 202 SPREAR------QTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRK 261
            P   R      Q  +E DK IQEL  +L  +K+  +TY+  L    + +E+H + LS++
Sbjct: 178 -PGRVRRGCIYDQYPNEHDK-IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKR 237

Query: 262 VQNVVTNLKEFESIEQEILH 276
           +Q++V N++  E  + +  H
Sbjct: 238 IQHIVDNVRNLEQRDHQQNH 249

[Close]

BLAST of Lsi03G017040.1 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 118.2 bits (295), Expect = 9.0e-27
Identity = 80/209 (38.28%), Postives = 110/209 (52.63%), Query Frame = 1


Query: 72  GIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQLGFVMRVMSCRR 131
           G+ G S       E   CD  + LEPY+G+EFESE+AAK FY+ YAR++GF  RV S RR
Sbjct: 49  GLVGNSGNYFPNQEEEACDL-LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRR 108

Query: 132 SEKDGRILARRLGCNKEGY--CVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVIT 191
           S +DG I+ R+  C KEG+      R K   +++PR  TR GCKA + VK   SGKW+++
Sbjct: 109 SRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVS 168

Query: 192 KFVKEHNHPLVVSP-----REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAAFMKI 251
            FVK+HNH LV        R  RQ        I  L       +R+ S   ++     K+
Sbjct: 169 GFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKV 228

Query: 252 VEEHTDQLSRKVQNVVTNLKEFESIEQEI 274
                D      +N + N ++ +SIE EI
Sbjct: 229 GFTEVD-----CRNYMRNNRQ-KSIEGEI 250

[Close]

BLAST of Lsi03G017040.1 vs. NCBI nr
Match: gi|778684889|ref|XP_004136586.2| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 2.0e-116
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 1


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLL VDADEGEE IEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCLLAVDADEGEEVIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           LAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQE+LHP
Sbjct: 188 LAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHP 226

[Close]

BLAST of Lsi03G017040.1 vs. NCBI nr
Match: gi|659084835|ref|XP_008443098.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 5.7e-116
Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 1


Query: 58  ERCLLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYA 117
           ERCLL VDADEGEEGIEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYA
Sbjct: 8   ERCLLAVDADEGEEGIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYA 67

Query: 118 RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIH 177
           RQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIH
Sbjct: 68  RQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIH 127

Query: 178 VKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 237
           VKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ
Sbjct: 128 VKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQ 187

Query: 238 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILH 276
           LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LH
Sbjct: 188 LAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLH 225

[Close]

BLAST of Lsi03G017040.1 vs. NCBI nr
Match: gi|700204202|gb|KGN59335.1| (hypothetical protein Csa_3G811580 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 9.1e-114
Identity = 207/216 (95.83%), Postives = 212/216 (98.15%), Query Frame = 1


Query: 61  LLTVDADEGEEGIEGGSFESPAGTELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQL 120
           L+ VDADEGEE IEGGS ESPAGTEL +CDGDIILEPYEGMEFESEDAAKIFYDKYARQL
Sbjct: 67  LINVDADEGEEVIEGGSLESPAGTELNDCDGDIILEPYEGMEFESEDAAKIFYDKYARQL 126

Query: 121 GFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 180
           GFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGAVRKPRPSTREGCKAMIHVKY
Sbjct: 127 GFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGAVRKPRPSTREGCKAMIHVKY 186

Query: 181 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 240
           DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA
Sbjct: 187 DKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTIELRNKKRLCSTYQEQLAA 246

Query: 241 FMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           FMKIVEEHTDQLS+KVQNVVTNLKEFESIEQE+LHP
Sbjct: 247 FMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHP 282

[Close]

BLAST of Lsi03G017040.1 vs. NCBI nr
Match: gi|778684895|ref|XP_011652118.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 3.1e-93
Identity = 173/176 (98.30%), Postives = 176/176 (100.00%), Query Frame = 1


Query: 101 MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 160
           MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60

Query: 161 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 220
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL
Sbjct: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 120

Query: 221 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILHP 277
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLS+KVQNVVTNLKEFESIEQE+LHP
Sbjct: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSKKVQNVVTNLKEFESIEQELLHP 176

[Close]

BLAST of Lsi03G017040.1 vs. NCBI nr
Match: gi|659084841|ref|XP_008443101.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X3 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 7.5e-92
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 1


Query: 101 MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGA 160
           MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEG+CVSIRGKFGA
Sbjct: 1   MEFESEDAAKIFYDKYARQLGFVMRVMSCRRSEKDGRILARRLGCNKEGHCVSIRGKFGA 60

Query: 161 VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQEL 220
           VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVS REARQTMDEKDKQIQEL
Sbjct: 61  VRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSAREARQTMDEKDKQIQEL 120

Query: 221 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQEILH 276
           TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQE+LH
Sbjct: 121 TIELRNKKRLCSTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESIEQELLH 175

The following BLAST results are available for this feature:

BLAST of Lsi03G017040.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRS5_ARATH	1.6e-25	38.28	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	[more]
FRS7_ARATH	3.0e-16	37.10	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1	[more]
FAR1_ARATH	6.7e-16	36.36	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1	[more]
FRS2_ARATH	2.0e-15	34.57	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1	[more]
FHY3_ARATH	5.7e-15	36.17	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1	[more]

BLAST of Lsi03G017040.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBE0_CUCSA	6.4e-114	95.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G811580 PE=4 SV=1	[more]
W9RFJ0_9ROSA	6.9e-92	81.90	Uncharacterized protein OS=Morus notabilis GN=L484_012164 PE=4 SV=1	[more]
A0A061ERC2_THECC	1.5e-91	80.57	Far-red impaired responsive (FAR1) family protein OS=Theobroma cacao GN=TCM_0200...	[more]
A0A067L617_JATCU	4.4e-91	77.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20862 PE=4 SV=1	[more]
A0A0D2RKG0_GOSRA	1.7e-90	78.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G128700 PE=4 SV=1	[more]

BLAST of Lsi03G017040.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43280.1	5.6e-85	81.42	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	1.4e-43	51.38	Far-red impaired responsive (FAR1) family protein	[more]
AT4G12850.1	8.4e-41	47.75	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	2.4e-35	43.50	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	9.0e-27	38.28	FAR1-related sequence 5	[more]

BLAST of Lsi03G017040.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778684889\|ref\|XP_004136586.2\|	2.0e-116	96.35	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucumis sativus]	[more]
gi\|659084835\|ref\|XP_008443098.1\|	5.7e-116	96.79	PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Cucumis melo]	[more]
gi\|700204202\|gb\|KGN59335.1\|	9.1e-114	95.83	hypothetical protein Csa_3G811580 [Cucumis sativus]	[more]
gi\|778684895\|ref\|XP_011652118.1\|	3.1e-93	98.30	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Cucumis sativus]	[more]
gi\|659084841\|ref\|XP_008443101.1\|	7.5e-92	98.29	PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR004330	FAR1_DNA_bnd_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi03G017040	Lsi03G017040	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G017040.1.three_prime_UTR.1	Lsi03G017040.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G017040.1.CDS.4	Lsi03G017040.1.CDS.4	CDS
Lsi03G017040.1.CDS.3	Lsi03G017040.1.CDS.3	CDS
Lsi03G017040.1.CDS.2	Lsi03G017040.1.CDS.2	CDS
Lsi03G017040.1.CDS.1	Lsi03G017040.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi03G017040.1	Lsi03G017040.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 112..200 score: 3.7
None	No IPR available	unknown	Coil	Coil	coord: 210..237 scor
None	No IPR available	PANTHER	PTHR31669:SF44	FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN	coord: 79..274 score: 1.1E