Lsi03G013390.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G013390.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Zinc finger BED domain-containing protein 4
Location	chr03 : 24288981 .. 24292161 (-)
Sequence length	2230

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTGAAATCATAGTTTGACTATCTTATTTTTCGTTACTTTGAAGAATCAAAACTCTAAAAAAAAAAAAAAAACTGTTTTTTTCCCTTAACCATGTATTTAAACTTCAATATTTCCATGTTTTTTCCCCAAACCATGTGAAGTAGTCGGAGAATGAATAAATTGAAGTTTGGAGGTTCGTATGGATGTTCAAAAAATCCGACCGACTCAACCCAACCTGTACGATTTGGGTTGTGTTATCAACTCATCTGGATTGGGTTGAGTTCAATTAAATGAAAGTTTTATGGGTTGAATTGGTTCATGAGTTCATCTAACATAACTCAAACCAACCCAAACTAATCCAACCTAATAAACTTTAAAATGTATATCTTTTTTACTTATGATACAATTAAATATACATATATTTATTTAGGGTTAAATAATTTATTCTTCAACAACTTGAATTGGGTCTAAAAAGTCCTCTAACCCAACCCCGATTAATCAAATATAAAGAAGACCCAACAAGTGGAAATCAATATTAATTGGGAAAGAAATAATATTGTGGGGGTTTGAACACAGGACCTCTTGAACCAACTTGCTCTGATACTATGTTAAATGGTCTATTAACTCAAAAGTTTAGGTTGATAGGTGAAGGCAAATTTAATATCATATATCTAACATTAGTTAAACTCTCAAACAGTAGAAAGTGTATGCTACTTTTTCATCAAGAATTTAATGATAATGACCAAATTTGAACGGCTAGTTTCAGGGGAGTTTGGTTTGTCCCCTCTCTTGTGTCTTTTTAGTGAAACTAAACATTTGATATTGACTGAAACGGAAAGTAATGTTAGTTTTGATTGAATCTTCTTATCAGTCTTAGAATTAGAGACAATGTACATTATCTACTTTCATTTTTCTACTCTCTTCTAATGATTTAGATCCACTTTAATAAGCTATTTCAAACTCTTGTAGGAAAAATCATGGATACCCCATGTGCAGTCAAGGTTGCGAACGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAAACGATAGGAAGCAAAAAGGTAATGTCAATGATCCTTATGCTGAATGTGAATATTGTGGTGCTTTATATACTAGTCATTCAAAGAGAAATAGGATGGAAAATATGGAAGCACATCCCGGGAACTACTGCGACGAGTATCCTTTTGGTCGTACTTGTTGTGATGGGGCAAAGGACGGATATAAAGAGAATTTGATTTTAGAAAGTGAAGAGGATGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGGTGTAGGTGAGAACTGTGGATTTTTTGATTCAGAAGTTGCAAAAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTCTCAAGTTTGTGGAAGATAAAGGGTTTAGAAGGTTTTTGGAGCAAACCGTGTGTAAATATGCTCCACAGTTTGTCATTCCCTCTGTACCTACAGTAGCTAGGCATATATTGGAAATATACCAGAGTGAGAAACAATCTCTAAAGAAGTTTTTTGTCGAACAAGGTGCTAGAGTTTCTCTCACAATTGATACTTGGACGTCAGATCAAGATATAAACTATATAGTTCTTACTGGACATTTTATTGATGTCAATTGGAAAATGCAGAAGAAGATTCTTAATTTTCGTTCAATTGAGAATCTTGATGGAGAGGCTATTGGAAAAGAAGTAGTAAGATATTTGATCAAATGGGGTATTGAGAAAATATTGACATTCACCATAGACAATGGTTGTTCAAATGATGCTGCTATTGCTTATTTAGTTCGCCATTTCAAGAACGAGTTGGTTATGGATGGTAAATTTGTGCATGTTATCTGTTGTGCCCATATTATAAATTTGATTGTATGTGATATTATGGAAGATTTTCATGAGTTGATATCTAAGATTTGAAATATTGTTAGGTTTGTGAGATCTACTCCTGAACGATTTAGAAGCTTTGAAAAATGTATTGAAGAGGAGAACTTATCTAGCAAGAGTGTCGTGTGCCTTGATTTTCCGAACAGGTGGGATTATACCTACATGATGCTTGAGGGAGCAGAGAAATCTGAAAAGGCATTTGAAAGACTAAAGATCCATGAGATGGGTTATTTGGAAGAGGATATTCCCACCAACAGAGATTGGGAGGTTGTCAGAACACTTGTTCCATTCTTATCGTTATTTTATGAAGCGACTTTAAAACCCTCTGGTTCTTTTCATGTACCTTCAAATTTGGTCTTTGACGAGATTAGCACCATCCAAAATTATATCAAAAAGTGTTCTTCCAATAGTGATAATCTTGTTCTCAAAGACATGGCAACGAAAATGCAAGTAAAGTATGATAAGTATTGGGGGAGTAGTGAAAATACTAATTACTTGTTATATGTTGCCGTTGTTTTAGACCCTCGTTACAAGTTGAAATTTATGGAATATTGCTTTAATGAGATGTTTGAGGCCAATGTGGCAAAAGAGGTGTGTAAGAAGGTTGAAGATGTTTTGAGGCAATTATTTAATGAGTATAGCTTATTTGCTGTCAACAATGCCTCATCTACTCGAGGCAAGGTGCGTCATTCAAATGCAGGACAAAGTTCTACAAAAAATGATGTTACAAAGGCTTTCCGTTTTAGGGATATGTTTGATGCAACGGAAGAAGATAAAAATCTTGAGGCAGCTACAGAGCTGGACATCTACTTAATGGAGCCGCTTGTGAATCAAGAGGAGAATTTTGACATTTTAGAATGGTAGAAGTGTAATTATCTTAGATACAAGGTTCTTAGTAATATTGCCTGGGAAATATTAGCAATCCCAGTATCCACAATTACTTCTAAATCTGCATTTAGTATTAGTGGATGTGTGATTGATTCTTCTGTGTCCTTGACAACATTTTCAAATCTAGTTGAGGTTCTTGCATGCGTGCATAAATGGCTTAGTAAGGGATACCGCACGAGTTGATCTTCGAGAACACGTAGATGATGCGAGGAAGGAAGCATAAACCATAGAGGTGGGTACAATGCTTCATGAAAAAGATGATTAGAATGCTTTAAATATGAACTCTTTAAGACTTGTTCTTTTGTCTGTTGAAGTTCATATTGCATTGAAAATCTTTTCTGGATTCTACTCAGTGAAGTGTTAAACTTCATTATTGTCTACAATATCCTTGATTTGATCTTTAAGGGGCTGTTTG

mRNA sequence

ATGGGAAAAATCATGGATACCCCATGTGCAGTCAAGGTTGCGAACGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAAACGATAGGAAGCAAAAAGGTAATGTCAATGATCCTTATGCTGAATGTGAATATTGTGGTGCTTTATATACTAGTCATTCAAAGAGAAATAGGATGGAAAATATGGAAGCACATCCCGGGAACTACTGCGACGAGTATCCTTTTGGTCGTACTTGTTGTGATGGGGCAAAGGACGGATATAAAGAGAATTTGATTTTAGAAAGTGAAGAGGATGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGGTGTAGGTGAGAACTGTGGATTTTTTGATTCAGAAGTTGCAAAAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTCTCAAGTTTGTGGAAGATAAAGGGTTTAGAAGGTTTTTGGAGCAAACCGTGTGTAAATATGCTCCACAGTTTGTCATTCCCTCTGTACCTACAGTAGCTAGGCATATATTGGAAATATACCAGAGTGAGAAACAATCTCTAAAGAAGTTTTTTGTCGAACAAGGTGCTAGAGTTTCTCTCACAATTGATACTTGGACGTCAGATCAAGATATAAACTATATAGTTCTTACTGGACATTTTATTGATGTCAATTGGAAAATGCAGAAGAAGATTCTTAATTTTCGTTCAATTGAGAATCTTGATGGAGAGGCTATTGGAAAAGAAGTAGTAAGATATTTGATCAAATGGGGTATTGAGAAAATATTGACATTCACCATAGACAATGGTTGTTCAAATGATGCTGCTATTGCTTATTTAGTTCGCCATTTCAAGAACGAGTTGGTTATGGATGGTAAATTTGTGCATGTTATCTGTTGTGCCCATATTATAAATTTGATTGTATGTGATATTATGGAAGATTTTCATGAGTTGATATCTAAGATTTGAAATATTGTTAGGTTTGTGAGATCTACTCCTGAACGATTTAGAAGCTTTGAAAAATGTATTGAAGAGGAGAACTTATCTAGCAAGAGTGTCGTGTGCCTTGATTTTCCGAACAGGTGGGATTATACCTACATGATGCTTGAGGGAGCAGAGAAATCTGAAAAGGCATTTGAAAGACTAAAGATCCATGAGATGGGTTATTTGGAAGAGGATATTCCCACCAACAGAGATTGGGAGGTTGTCAGAACACTTGTTCCATTCTTATCGTTATTTTATGAAGCGACTTTAAAACCCTCTGGTTCTTTTCATGTACCTTCAAATTTGGTCTTTGACGAGATTAGCACCATCCAAAATTATATCAAAAAGTGTTCTTCCAATAGTGATAATCTTGTTCTCAAAGACATGGCAACGAAAATGCAAGTAAAGTATGATAAGTATTGGGGGAGTAGTGAAAATACTAATTACTTGTTATATGTTGCCGTTGTTTTAGACCCTCGTTACAAGTTGAAATTTATGGAATATTGCTTTAATGAGATGTTTGAGGCCAATGTGGCAAAAGAGGTGTGTAAGAAGGTTGAAGATGTTTTGAGGCAATTATTTAATGAGTATAGCTTATTTGCTGTCAACAATGCCTCATCTACTCGAGGCAAGGTGCGTCATTCAAATGCAGGACAAAGTTCTACAAAAAATGATGTTACAAAGGCTTTCCGTTTTAGGGATATGTTTGATGCAACGGAAGAAGATAAAAATCTTGAGGCAGCTACAGAGCTGGACATCTACTTAATGGAGCCGCTTGTGAATCAAGAGGAGAATTTTGACATTTTAGAATGGTAGAAGTGTAATTATCTTAGATACAAGGTTCTTAGTAATATTGCCTGGGAAATATTAGCAATCCCAGTATCCACAATTACTTCTAAATCTGCATTTAGTATTAGTGGATGTGTGATTGATTCTTCTGTGTCCTTGACAACATTTTCAAATCTAGTTGAGGTTCTTGCATGCGTGCATAAATGGCTTAGTAAGGGATACCGCACGAGTTGATCTTCGAGAACACGTAGATGATGCGAGGAAGGAAGCATAAACCATAGAGGTGGGTACAATGCTTCATGAAAAAGATGATTAGAATGCTTTAAATATGAACTCTTTAAGACTTGTTCTTTTGTCTGTTGAAGTTCATATTGCATTGAAAATCTTTTCTGGATTCTACTCAGTGAAGTGTTAAACTTCATTATTGTCTACAATATCCTTGATTTGATCTTTAAGGGGCTGTTTG

Coding sequence (CDS)

ATGGGAAAAATCATGGATACCCCATGTGCAGTCAAGGTTGCGAACGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAAACGATAGGAAGCAAAAAGGTAATGTCAATGATCCTTATGCTGAATGTGAATATTGTGGTGCTTTATATACTAGTCATTCAAAGAGAAATAGGATGGAAAATATGGAAGCACATCCCGGGAACTACTGCGACGAGTATCCTTTTGGTCGTACTTGTTGTGATGGGGCAAAGGACGGATATAAAGAGAATTTGATTTTAGAAAGTGAAGAGGATGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGGTGTAGGTGAGAACTGTGGATTTTTTGATTCAGAAGTTGCAAAAATACTAATTGCAAAAATGATCATAATTGATAAATTGCCTCTCAAGTTTGTGGAAGATAAAGGGTTTAGAAGGTTTTTGGAGCAAACCGTGTGTAAATATGCTCCACAGTTTGTCATTCCCTCTGTACCTACAGTAGCTAGGCATATATTGGAAATATACCAGAGTGAGAAACAATCTCTAAAGAAGTTTTTTGTCGAACAAGGTGCTAGAGTTTCTCTCACAATTGATACTTGGACGTCAGATCAAGATATAAACTATATAGTTCTTACTGGACATTTTATTGATGTCAATTGGAAAATGCAGAAGAAGATTCTTAATTTTCGTTCAATTGAGAATCTTGATGGAGAGGCTATTGGAAAAGAAGTAGTAAGATATTTGATCAAATGGGGTATTGAGAAAATATTGACATTCACCATAGACAATGGTTGTTCAAATGATGCTGCTATTGCTTATTTAGTTCGCCATTTCAAGAACGAGTTGGTTATGGATGGTAAATTTGTGCATGTTATCTGTTGTGCCCATATTATAAATTTGATTGTATGTGATATTATGGAAGATTTTCATGAGTTGATATCTAAGATTTGA

Protein sequence

MGKIMDTPCAVKVANEDENVDYATTRDQNDRKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIAYLVRHFKNELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI

Homology

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BLAST of Lsi03G013390.1 vs. Swiss-Prot
Match: RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-27
Identity = 67/206 (32.52%), Postives = 111/206 (53.88%), Query Frame = 1


Query: 119 FDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIY 178
           FD + +   +AKMII+   PL  V+   F  F++       P+F +  V T+   +  +Y
Sbjct: 163 FDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSL----QPRFRVVDVETMEGEVYAVY 222

Query: 179 QSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENL 238
           Q EK++L + F     R+SLTI  WT+ Q + Y+ L G FID  WK+ +++LNF  + + 
Sbjct: 223 QKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSP 282

Query: 239 DGE-AIGKEVVRYLIKWGI-EKILTFTIDNGCSNDAAIAYLVRHF---KNELVMDGKFVH 298
             E A+ + +   L  W + +K+ T T+DN CS+    +  +R +   KN L++ G+   
Sbjct: 283 HSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFV 342

Query: 299 VICCAHIINLIVCDIMEDFHELISKI 320
           V C AHI+N +  D++   H +I  I
Sbjct: 343 VRCYAHILNAVAQDVIASIHGVIYNI 364

[Close]

BLAST of Lsi03G013390.1 vs. Swiss-Prot
Match: RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-27
Identity = 68/206 (33.01%), Postives = 110/206 (53.40%), Query Frame = 1


Query: 119 FDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIY 178
           FD E +   +AKMII+   PL  V+   F  F++       P+F +  V T+   +  +Y
Sbjct: 163 FDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSL----QPRFRVVDVETMEWEVYAVY 222

Query: 179 QSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENL 238
           Q EK++L + F     R+SL I  WT+ Q + Y+ L G FID  WKM +++LNF  + + 
Sbjct: 223 QKEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSP 282

Query: 239 DGE-AIGKEVVRYLIKWGI-EKILTFTIDNGCSNDAAIAYLVRHF---KNELVMDGKFVH 298
             E A+ + +   L  W + +K+ T T+DN CS+    +  +R +   KN L++ G+   
Sbjct: 283 HSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFV 342

Query: 299 VICCAHIINLIVCDIMEDFHELISKI 320
           V C AHI+N +  D++   H +I  I
Sbjct: 343 VRCYAHILNAVAQDVIASIHGVIYNI 364

[Close]

BLAST of Lsi03G013390.1 vs. Swiss-Prot
Match: RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.6e-23
Identity = 61/207 (29.47%), Postives = 108/207 (52.17%), Query Frame = 1


Query: 119 FDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIY 178
           FD +     +AKMII+   PL  VE +GF  F+        P+F +  V T+   +  +Y
Sbjct: 203 FDQDRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSL----QPRFRVIDVDTIEGQVHSVY 262

Query: 179 QSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENL 238
           Q E+++L   F     R+SLT+  W + Q + YI L   FID  W++ ++++NF  + + 
Sbjct: 263 QKERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSP 322

Query: 239 DGE-AIGKEVVRYLIKWGI-EKILTFTIDNG-CSNDAAIAYLVRHFKNE---LVMDGKFV 298
             E ++ + +   L  W + +K+ T T+DN   S+D   A ++ +  N+   +++ G+  
Sbjct: 323 HSENSLSEAISTSLSDWNMKDKLFTITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLF 382

Query: 299 HVICCAHIINLIVCDIMEDFHELISKI 320
            V C AHI+N +  D++   H +I  I
Sbjct: 383 VVRCYAHILNTVAQDVIASVHSVIYHI 405

[Close]

BLAST of Lsi03G013390.1 vs. Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 71/236 (30.08%), Postives = 120/236 (50.85%), Query Frame = 1


Query: 89  KENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFR 148
           K  L L+SE+D  ++    E          +D  V+   +   II+ + P   VE + F 
Sbjct: 145 KGQLCLKSEKDHGKDINLIEPYK-------YDEVVSLKKLHLAIIMHEYPFNIVEHEYFV 204

Query: 149 RFLEQTVCKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQD 208
            F++       P F I S  T  ++I+++Y  EK+ L     +  +R S T+D WTS Q+
Sbjct: 205 EFVKSL----RPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQN 264

Query: 209 INYIVLTGHFIDVNWKMQKKILNFRSIENL-DGEAIGKEVVRYLIKWGIE-KILTFTIDN 268
            +Y+ +T H+ID +W +QK+I+ F  +E    G+ + +     ++KW IE K+   ++DN
Sbjct: 265 KSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDN 324

Query: 269 GCSNDAAIAYLVRHFK---NELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
             +N+ A+  ++   +   + LV DG F HV C  HI+NL+  D +      I KI
Sbjct: 325 ASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKI 369

[Close]

BLAST of Lsi03G013390.1 vs. Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 71/236 (30.08%), Postives = 120/236 (50.85%), Query Frame = 1


Query: 89  KENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFR 148
           K  L L+SE+D  ++    E          +D  V+   +   II+ + P   VE + F 
Sbjct: 200 KGQLCLKSEKDHGKDINLIEPYK-------YDEVVSLKKLHLAIIMHEYPFNIVEHEYFV 259

Query: 149 RFLEQTVCKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQD 208
            F++       P F I S  T  ++I+++Y  EK+ L     +  +R S T+D WTS Q+
Sbjct: 260 EFVKSL----RPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWTSCQN 319

Query: 209 INYIVLTGHFIDVNWKMQKKILNFRSIENL-DGEAIGKEVVRYLIKWGIE-KILTFTIDN 268
            +Y+ +T H+ID +W +QK+I+ F  +E    G+ + +     ++KW IE K+   ++DN
Sbjct: 320 KSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDN 379

Query: 269 GCSNDAAIAYLVRHFK---NELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
             +N+ A+  ++   +   + LV DG F HV C  HI+NL+  D +      I KI
Sbjct: 380 ASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKI 424

[Close]

BLAST of Lsi03G013390.1 vs. TrEMBL
Match: D0UIX2_CUCME (Putative transposase OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.9e-52
Identity = 119/282 (42.20%), Postives = 165/282 (58.51%), Query Frame = 1


Query: 40  PYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEED 99
           P A C++CGA Y   SKRN   N++ H    C  Y                   +   ED
Sbjct: 46  PRAACKHCGASYACDSKRNGTTNLKRHLEK-CKMY-------------------VNPLED 105

Query: 100 EEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYA 159
             E E + E   +  +   F  E  + ++A+M+I+D+LP KFVE +GF +F         
Sbjct: 106 NVEGEGDSESNLMTAS---FTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL----N 165

Query: 160 PQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFI 219
           P+FVIPS  TVA+   ++Y  EK+ LK      G RV LT DTWTS Q+INY+V+T HFI
Sbjct: 166 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 225

Query: 220 DVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIAYLVR 279
           D +W + K+ILNF  + N  G+ IG+ + + L  WGI+++ T T+DN  SND AIAYLV+
Sbjct: 226 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 285

Query: 280 HFK--NELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
            FK  N LV+DG+F+H+ CCAHI+NLIV D ++D H  I +I
Sbjct: 286 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRI 300

[Close]

BLAST of Lsi03G013390.1 vs. TrEMBL
Match: U5FZ51_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s05700g PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 119/292 (40.75%), Postives = 166/292 (56.85%), Query Frame = 1


Query: 31  RKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKE 90
           +K  GN   P A C+YCG  Y  H+  N   NM +H G  C ++PF         D  ++
Sbjct: 59  KKLDGNAKTPRAACKYCGKDYACHTILNGTSNMWSHLG-VCKKFPF-------VIDRKQK 118

Query: 91  NLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRF 150
            L+LE +   E  +  EE     +  G+   E  K L  KM+I+D+LP  F+E++GF+ F
Sbjct: 119 TLVLEPKPKIEGGDNGEENLVTVKAVGYNYEECRKAL-GKMVILDELPFNFIENQGFKSF 178

Query: 151 LEQTVCKYA-PQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDI 210
                CK   P+F +PS  T+ R  L+IY  EK+ LKK   +Q   + LT DTWTS Q+I
Sbjct: 179 -----CKVMQPRFDVPSRLTIWRDCLKIYLVEKEKLKKALKDQC--LCLTTDTWTSIQNI 238

Query: 211 NYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCS 270
           NY+ LT H+ID  W + K+ILNF  + N  GE IG+ +   L++WGI+KILT T+DN  S
Sbjct: 239 NYMCLTAHWIDEGWNLNKRILNFCQVSNHKGETIGQAIESCLLEWGIDKILTVTVDNASS 298

Query: 271 NDAAIAYLVRHFKN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           N+  I YL R        ++   F+HV CCAHI+NLIVC  ++D  E + KI
Sbjct: 299 NNLTIKYLKRVTIGWATNILSNDFMHVRCCAHIVNLIVCAGLKDIDESVVKI 334

[Close]

BLAST of Lsi03G013390.1 vs. TrEMBL
Match: A0A151R6M7_CAJCA (Putative AC transposase OS=Cajanus cajan GN=KK1_040765 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 111/301 (36.88%), Postives = 166/301 (55.15%), Query Frame = 1


Query: 21  DYATTRDQNDRKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTC 80
           ++  T  +N+ K+K       AEC +CG  Y    K +   ++  H G  C +YP     
Sbjct: 57  EHFKTISENESKEK------MAECNHCGKRYRCDPKIHGTSSLLNHIGK-CPKYP----- 116

Query: 81  CDGAKDGYKENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLK 140
                     N I+ ++ ++     + +  G+      ++ E  +  +   II+D+ P +
Sbjct: 117 ----------NAII-NDPNQTSLTLKRDVSGLTVVSQRYNVEACRRALIVFIILDEQPFR 176

Query: 141 FVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTI 200
            VE +GF+ F  Q      PQF++PS  T+AR   + Y  EK  LK FF    ARV+LT 
Sbjct: 177 VVEGEGFKHFCRQL----QPQFIVPSRHTIARLCFQFYMDEKHKLKAFFKSNCARVALTT 236

Query: 201 DTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKIL 260
           D WTS Q++NY+ LT HFID +WK QK+I++F  + N  GE IGK+V   L +WG+  + 
Sbjct: 237 DCWTSIQNLNYLALTTHFIDNDWKYQKRIISFSIVPNHKGETIGKKVEEVLKEWGLRNVS 296

Query: 261 TFTIDNGCSNDAAIAYLVRHFKN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISK 320
           T T+DN  +ND A+ YL + FKN   LVMDG+F H+ CCAHI+NL+V D ++D H  I+ 
Sbjct: 297 TITVDNASANDVAVTYLKKRFKNMGGLVMDGQFFHMRCCAHILNLVVNDGLKDVHNSIAN 330

[Close]

BLAST of Lsi03G013390.1 vs. TrEMBL
Match: A0A151R5W9_CAJCA (Putative AC transposase OS=Cajanus cajan GN=KK1_040764 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45
Identity = 107/280 (38.21%), Postives = 157/280 (56.07%), Query Frame = 1


Query: 42  AECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEEDEE 101
           AEC +CG  Y    K +   ++  H G  C +YP               N I+ ++ ++ 
Sbjct: 2   AECNHCGKRYRCDPKIHGTSSLLNHIGK-CPKYP---------------NAII-NDPNQT 61

Query: 102 EEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQ 161
               + +  G+      ++ E  +  +   II+D+ P + VE +GF+ F  Q      PQ
Sbjct: 62  SLTLKRDVSGLTVVSQRYNVEACRRALIVFIILDEQPFRVVEGEGFKHFCRQL----QPQ 121

Query: 162 FVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDV 221
           F++PS  T+AR   + Y  EK  LK FF    ARV+LT D WTS Q++NY+ LT HFID 
Sbjct: 122 FIVPSRHTIARLCFQFYMDEKHKLKAFFKSNCARVALTTDCWTSIQNLNYLALTTHFIDN 181

Query: 222 NWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIAYLVRHF 281
           +WK QK+I++F  + N  GE IGK+V   L +WG+  + T T+DN  +ND A+ YL + F
Sbjct: 182 DWKYQKRIISFSIVPNHKGETIGKKVEEVLKEWGLRNVSTITVDNASANDVAVTYLKKRF 241

Query: 282 KN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           KN   LVMDG+F H+ CCAHI+NL+V D ++D H  I+ I
Sbjct: 242 KNMGGLVMDGQFFHMRCCAHILNLVVNDGLKDVHNSIANI 260

[Close]

BLAST of Lsi03G013390.1 vs. TrEMBL
Match: A0A0K9QH16_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_185310 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-43
Identity = 118/287 (41.11%), Postives = 164/287 (57.14%), Query Frame = 1


Query: 42  AECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEEDEE 101
           A+C YC       SK      M+ H  + C EYP          D  +  L   SE  E+
Sbjct: 83  AKCMYCPTDVCGSSKTGTTV-MKNHL-HRCKEYPPNI-------DRSQRLLSFLSEHSEQ 142

Query: 102 EEEEEEEEEGV-GENCGF-----FDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTV 161
              ++   E V GE  G      F  E  +   AKMII+D++P + VE +GF+ F+  +V
Sbjct: 143 TMGDDSVGENVLGEKKGKLEFWKFKQEDTRKAFAKMIIMDEMPFRVVEREGFQLFM--SV 202

Query: 162 CKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLT 221
           C+  P F+IPS  TVAR    ++  EK+ LK +F +  +R+ LT DTW+S Q + Y+ LT
Sbjct: 203 CQ--PNFLIPSRFTVARDCYRVFLDEKKKLKSYFSKCSSRICLTTDTWSSCQTLTYMCLT 262

Query: 222 GHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIA 281
            HFID NWK+ KKILNF  I    GEAIGK V + L++WGI K+LT T+DN  SND  + 
Sbjct: 263 AHFIDQNWKLHKKILNFCPISGHSGEAIGKGVEKCLLEWGITKVLTITVDNASSNDVGVQ 322

Query: 282 YL---VRHFKNELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           YL   ++ +K+  V+DGK+VH+ C AH++NL V D ++D  E I KI
Sbjct: 323 YLRKRLQRWKDGTVLDGKYVHMRCAAHLLNLTVRDGLKDCEESIKKI 356

[Close]

BLAST of Lsi03G013390.1 vs. TAIR10
Match: AT3G42170.1 (AT3G42170.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20
Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 1


Query: 119 FDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIY 178
           F+ +  +  IAKMII+   PL  V+  GF  F++       P F   S   V    +  Y
Sbjct: 160 FNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSI----QPHFDAVSFNNVQGDCVATY 219

Query: 179 QSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILN--FRSIE 238
            +EKQ++ K       R  LT+D WTS   + Y+ +T H+ID +WK+QKK+LN    S  
Sbjct: 220 LAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYP 279

Query: 239 NLDGEAIGKEVVRYLIKWGIE-KILTFTIDNGCSNDAAIAYLVR-HFKNELVMDGKFVHV 298
             D EA+   V   + +WG+E K+   T ++  SN A      +   KN  ++DG+ V  
Sbjct: 280 EAD-EALSLAVANCVSEWGLEGKLFNVTFNHPASNSAVENIRPQLCIKNPGILDGQLVIG 339

Query: 299 ICCAHIINLIVCDIMEDFHELISKI 320
            C A     +  D++E   ++I  I
Sbjct: 340 NCVARTFGSLAKDVLEKGKDVIKNI 359

[Close]

BLAST of Lsi03G013390.1 vs. TAIR10
Match: AT1G18560.1 (AT1G18560.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-08
Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 1


Query: 176 EIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSI 235
           E++ S +  +K       ++VS+T+  W S ++I Y+ +TG +ID NW   + +L+   I
Sbjct: 185 EVFTSMRGDVKTTLEHIQSKVSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRI 244

Query: 236 ENLDGEAIGKEVVRYLIK----WGIE-KILTFTIDNGCSNDAAIAYLVRHFKNELVMDGK 295
               G   G E+   L+K    + IE +IL  T DN  +   A   L  +F  + V+   
Sbjct: 245 PYPSG---GSEIYNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL--P 304

Query: 296 FVHVICCAHIINLIVCDIMEDFHELISKI 320
           F ++ C A  +N I+ + +     +ISK+
Sbjct: 305 FCYIPCAAQTLNDIIDEGLATIKPIISKV 328

[Close]

BLAST of Lsi03G013390.1 vs. NCBI nr
Match: gi|261597692|gb|ACX85638.1| (putative transposase [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51
Identity = 119/282 (42.20%), Postives = 165/282 (58.51%), Query Frame = 1


Query: 40  PYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEED 99
           P A C++CGA Y   SKRN   N++ H    C  Y                   +   ED
Sbjct: 46  PRAACKHCGASYACDSKRNGTTNLKRHLEK-CKMY-------------------VNPLED 105

Query: 100 EEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYA 159
             E E + E   +  +   F  E  + ++A+M+I+D+LP KFVE +GF +F         
Sbjct: 106 NVEGEGDSESNLMTAS---FTQENCRKMLARMVILDELPFKFVESEGFHQFCRAL----N 165

Query: 160 PQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFI 219
           P+FVIPS  TVA+   ++Y  EK+ LK      G RV LT DTWTS Q+INY+V+T HFI
Sbjct: 166 PKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFI 225

Query: 220 DVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIAYLVR 279
           D +W + K+ILNF  + N  G+ IG+ + + L  WGI+++ T T+DN  SND AIAYLV+
Sbjct: 226 DDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVK 285

Query: 280 HFK--NELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
            FK  N LV+DG+F+H+ CCAHI+NLIV D ++D H  I +I
Sbjct: 286 KFKGRNGLVLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRI 300

[Close]

BLAST of Lsi03G013390.1 vs. NCBI nr
Match: gi|1009156200|ref|XP_015896121.1| (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 113/279 (40.50%), Postives = 163/279 (58.42%), Query Frame = 1


Query: 44  CEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKENLILESEEDEEEE 103
           C YCG  Y S +K+     M+ H  N C EYP+        +  +++N+  +  +D+E  
Sbjct: 101 CNYCGRHYASDTKKIGASIMKCHL-NSCKEYPYN------LEYPHQKNVSFKDRKDDEYV 160

Query: 104 EEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRFLEQTVCKYAPQFV 163
            + +           F+ E  K   A+MII D LP   VE +GF+ F  +      P+F 
Sbjct: 161 GQVKA----------FNKEACKAACARMIIKDGLPFTLVEGEGFKEFCVEL----CPEFD 220

Query: 164 IPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDINYIVLTGHFIDVNW 223
            PS   +AR + ++Y  EK+ L+ FF+     VSLT DTWTS Q+INY+VLT HF+D +W
Sbjct: 221 PPSSKVIARDVYQLYLEEKKKLQSFFMNNNVMVSLTTDTWTSIQNINYMVLTAHFVDSDW 280

Query: 224 KMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCSNDAAIAYL---VRH 283
             QKKILNF  I N  GE IGK +   LI+W IE+  T T+DN  +ND AIAYL   +++
Sbjct: 281 IPQKKILNFCQIANDKGETIGKLIESCLIEWHIERFFTITMDNAKTNDVAIAYLRGKLKN 340

Query: 284 FKNELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           +KN  V++G+F+H+ CCAHI+NLIV D++ + + LI  I
Sbjct: 341 WKNGCVLEGEFLHMQCCAHIMNLIVTDVLNEQNNLIDLI 358

[Close]

BLAST of Lsi03G013390.1 vs. NCBI nr
Match: gi|566196968|ref|XP_006376750.1| (hypothetical protein POPTR_0012s05700g [Populus trichocarpa])

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 119/292 (40.75%), Postives = 166/292 (56.85%), Query Frame = 1


Query: 31  RKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKDGYKE 90
           +K  GN   P A C+YCG  Y  H+  N   NM +H G  C ++PF         D  ++
Sbjct: 59  KKLDGNAKTPRAACKYCGKDYACHTILNGTSNMWSHLG-VCKKFPF-------VIDRKQK 118

Query: 91  NLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKGFRRF 150
            L+LE +   E  +  EE     +  G+   E  K L  KM+I+D+LP  F+E++GF+ F
Sbjct: 119 TLVLEPKPKIEGGDNGEENLVTVKAVGYNYEECRKAL-GKMVILDELPFNFIENQGFKSF 178

Query: 151 LEQTVCKYA-PQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTSDQDI 210
                CK   P+F +PS  T+ R  L+IY  EK+ LKK   +Q   + LT DTWTS Q+I
Sbjct: 179 -----CKVMQPRFDVPSRLTIWRDCLKIYLVEKEKLKKALKDQC--LCLTTDTWTSIQNI 238

Query: 211 NYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTIDNGCS 270
           NY+ LT H+ID  W + K+ILNF  + N  GE IG+ +   L++WGI+KILT T+DN  S
Sbjct: 239 NYMCLTAHWIDEGWNLNKRILNFCQVSNHKGETIGQAIESCLLEWGIDKILTVTVDNASS 298

Query: 271 NDAAIAYLVRHFKN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           N+  I YL R        ++   F+HV CCAHI+NLIVC  ++D  E + KI
Sbjct: 299 NNLTIKYLKRVTIGWATNILSNDFMHVRCCAHIVNLIVCAGLKDIDESVVKI 334

[Close]

BLAST of Lsi03G013390.1 vs. NCBI nr
Match: gi|1009134697|ref|XP_015884588.1| (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba])

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 112/296 (37.84%), Postives = 163/296 (55.07%), Query Frame = 1


Query: 27  DQNDRKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTCCDGAKD 86
           D  ++ +  + ++P  +C+Y G  Y  +SK      +  H  ++C +YP+        +D
Sbjct: 44  DHYEKMENSDPDNPRCKCKYYGVDYACNSKYGTSTLLN-HLNHHCKKYPYR------VQD 103

Query: 87  GYKENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLKFVEDKG 146
             ++ L   ++          E +G       F+ E  ++  AKMII+D+LP  FVE +G
Sbjct: 104 KKQKTLTFGAQN---------ESDGSNLLAVGFNKEACRLACAKMIILDELPFSFVEGRG 163

Query: 147 FRRFLEQTVCKYA-PQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTIDTWTS 206
           FR F     C  A P+F  PS  T+ R I  +Y  EK  LK  F     R+SLT DTWTS
Sbjct: 164 FRMF-----CNVACPKFDPPSRRTIVRDIYALYLDEKLQLKNTFSLNCQRISLTTDTWTS 223

Query: 207 DQDINYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKILTFTID 266
            Q+INY+ LT H+ID NW + K+ILNF  I N  GE IGK +   L +WGIEK+ T T+D
Sbjct: 224 IQNINYMSLTAHYIDSNWMLHKRILNFCVIPNHKGETIGKLIGNCLYEWGIEKVFTITVD 283

Query: 267 NGCSNDAAIAYLVRHFKN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISKI 320
           N  +N+ AI Y+ R   N    V+DG  +H+ CCAHI+NLIV + + + H+ I+ I
Sbjct: 284 NASANNVAIEYIKRKLNNWKGCVLDGDHLHMRCCAHIVNLIVSEGLREAHDSIASI 318

[Close]

BLAST of Lsi03G013390.1 vs. NCBI nr
Match: gi|1012326198|gb|KYP38025.1| (Putative AC transposase [Cajanus cajan])

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-45
Identity = 111/301 (36.88%), Postives = 166/301 (55.15%), Query Frame = 1


Query: 21  DYATTRDQNDRKQKGNVNDPYAECEYCGALYTSHSKRNRMENMEAHPGNYCDEYPFGRTC 80
           ++  T  +N+ K+K       AEC +CG  Y    K +   ++  H G  C +YP     
Sbjct: 57  EHFKTISENESKEK------MAECNHCGKRYRCDPKIHGTSSLLNHIGK-CPKYP----- 116

Query: 81  CDGAKDGYKENLILESEEDEEEEEEEEEEEGVGENCGFFDSEVAKILIAKMIIIDKLPLK 140
                     N I+ ++ ++     + +  G+      ++ E  +  +   II+D+ P +
Sbjct: 117 ----------NAII-NDPNQTSLTLKRDVSGLTVVSQRYNVEACRRALIVFIILDEQPFR 176

Query: 141 FVEDKGFRRFLEQTVCKYAPQFVIPSVPTVARHILEIYQSEKQSLKKFFVEQGARVSLTI 200
            VE +GF+ F  Q      PQF++PS  T+AR   + Y  EK  LK FF    ARV+LT 
Sbjct: 177 VVEGEGFKHFCRQL----QPQFIVPSRHTIARLCFQFYMDEKHKLKAFFKSNCARVALTT 236

Query: 201 DTWTSDQDINYIVLTGHFIDVNWKMQKKILNFRSIENLDGEAIGKEVVRYLIKWGIEKIL 260
           D WTS Q++NY+ LT HFID +WK QK+I++F  + N  GE IGK+V   L +WG+  + 
Sbjct: 237 DCWTSIQNLNYLALTTHFIDNDWKYQKRIISFSIVPNHKGETIGKKVEEVLKEWGLRNVS 296

Query: 261 TFTIDNGCSNDAAIAYLVRHFKN--ELVMDGKFVHVICCAHIINLIVCDIMEDFHELISK 320
           T T+DN  +ND A+ YL + FKN   LVMDG+F H+ CCAHI+NL+V D ++D H  I+ 
Sbjct: 297 TITVDNASANDVAVTYLKKRFKNMGGLVMDGQFFHMRCCAHILNLVVNDGLKDVHNSIAN 330

The following BLAST results are available for this feature:

BLAST of Lsi03G013390.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RSLE2_ORYSJ	1.0e-27	32.52	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
RSLE1_ORYSJ	1.0e-27	33.01	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
RSLE3_ORYSJ	2.6e-23	29.47	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
TRAC9_MAIZE	2.6e-20	30.08	Putative AC9 transposase OS=Zea mays PE=4 SV=1	[more]
TRA1_MAIZE	2.6e-20	30.08	Putative AC transposase OS=Zea mays PE=2 SV=2	[more]

BLAST of Lsi03G013390.1 vs. TrEMBL


Match Name	E-value	Identity	Description
D0UIX2_CUCME	6.9e-52	42.20	Putative transposase OS=Cucumis melo PE=4 SV=1	[more]
U5FZ51_POPTR	2.0e-46	40.75	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s05700g PE=4 SV=1	[more]
A0A151R6M7_CAJCA	1.3e-45	36.88	Putative AC transposase OS=Cajanus cajan GN=KK1_040765 PE=4 SV=1	[more]
A0A151R5W9_CAJCA	2.8e-45	38.21	Putative AC transposase OS=Cajanus cajan GN=KK1_040764 PE=4 SV=1	[more]
A0A0K9QH16_SPIOL	2.6e-43	41.11	Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_185310 PE=4 SV=1	[more]

BLAST of Lsi03G013390.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G42170.1	2.8e-20	31.71	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	1.9e-08	28.19	BED zinc finger ;hAT family dimerisation domain	[more]

BLAST of Lsi03G013390.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|261597692\|gb\|ACX85638.1\|	1.0e-51	42.20	putative transposase [Cucumis melo]	[more]
gi\|1009156200\|ref\|XP_015896121.1\|	1.1e-47	40.50	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphu...	[more]
gi\|566196968\|ref\|XP_006376750.1\|	2.8e-46	40.75	hypothetical protein POPTR_0012s05700g [Populus trichocarpa]	[more]
gi\|1009134697\|ref\|XP_015884588.1\|	6.3e-46	37.84	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphu...	[more]
gi\|1012326198\|gb\|KYP38025.1\|	1.8e-45	36.88	Putative AC transposase [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi03G013390	Lsi03G013390	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G013390.1.three_prime_UTR.1	Lsi03G013390.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G013390.1.CDS.2	Lsi03G013390.1.CDS.2	CDS
Lsi03G013390.1.CDS.1	Lsi03G013390.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi03G013390.1	Lsi03G013390.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 193..315 score: 3.19
None	No IPR available	unknown	Coil	Coil	coord: 89..114 scor
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 92..319 score: 6.3E-72coord: 32..72 score: 6.3
None	No IPR available	PANTHER	PTHR23272:SF0	SUBFAMILY NOT NAMED	coord: 92..319 score: 6.3E-72coord: 32..72 score: 6.3
None	No IPR available	unknown	SSF140996	Hermes dimerisation domain	coord: 127..183 score: 8.8