Lsi03G013170.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGGAGCGTATCATCAGCAAATTGAAGGTGGGAGATGTGAAATCTGTCTCCATTGAGAGTTAAACCCTGTACAAAGTCATCCCTAGCACTTTTTCCTACATTTGACTAAAAACATCAGTCACAAGAACAATATGGAGCGTATCATCATCCATAATAGTTAATTTGTTGACAATTTATTGTGATCTGATAATCTTTTAGGGGAAGTTTCGTGAGCTTTCCTTACTGGTGCAAATTCCCTGCATTTTCCACTCATTTTGTTGCTTTACATTTTCTTTGAATGCATTGCCAATATACTTATGGATTGAGGATTTTCATTTTTCATATTTTCTGTCTCCAGTCAGTCCTTCCTTCTGGCATGTCCGAACTACAGAGACTCAGATGCAGGGTTGCCTTCCATGCACTCAATTTCCGGCCAGAAGTTCAGATGCTTGGAAAGAAAATAGTGCAGAGGTATCTTCTGACTAGTTCTATGGAATTTGATTTTTTTTATTTTATTATTATTATTATTTGCACTATAAGTATGCTTATGGTTGATGGAAACAAAAATAAAACAGAGAAGATAATCTCTGCATATATATCCCTCCACGTTGCTGTGTGGATTATGATTTAATATCATAGACGTGCATACTGGAGTCCTGAACTGTGCATGCACCTGATGAACCTTGGCATTTTCTTCTACAATTTACAGGTTACGAGCTTGGGGCCAACCTTTCCTTGCTTTTCATCCTGGATTAGTCAGAGATATTCTGGCATACCATGGTTGTGCTGAACTCTTTCAGGTAGCCGTTTGAGGCTCTTTGCTGCATAATATTTAACAATGGAAGTGGCATTTGATTCTCAATGAGTTTTGTGTTATTTATCATTTTTGTTGAGTTCTATTGTATTTTTTAGGATGTGCACACTGAACTCATACAGTATCGAAGGGCACAGATGATAGAAAAAGGGATTATCAGGGAAGAATTGAGTGTAGATTCCCGCAAACGGAGAGATAACGGTGCCTGCCCTCTAATGCCTGAAGAGGTATGAGCTTGACTAATCACTTTTATTGACTGTATGCAAATCTTCTACGATTGTGTTATTTATCTGACCTTTTCTTTTTGTACATAACATACTAGTTCTTTCATTTTATGAAAGCACTCACATCTTAAGCACAACCTACTATTGAAGTTAGGTATCCCTTTATTGCTGACTGATACTCTGGTTACCAAATAAGGGACACATCAGCTGGAGAAATCCTAGGCTTCCAAATAAAGATTGTAATTTGATATTTGAATAACCATGACCACCCTGAGTTAGTTCAGTAGTTGAATGGGCTAAGTAGTTAATGTTGAAGTCTTTGAAATAATTGGTTCAAATTATGATTATTACTTATTAAAGATGTTAAATATTTTAATATATCATAAGTCTTTTGATGCCAAATGCTATAAGTATAGATAATTGACCATGGGATAAGTAAACTGTGCAGAGATGAATTGGATACTTGTGGTTACGAAGGCTGGGTAATATTTTAGTTACAATTTATCTCTAGAATGTCATAACTTCTATATTTAGCTACATTAACATGTGATTAGAAGTTTAAACTTCCAATTGGTTATGAATTTTTTCTAGTTTAAATTTTTGTGTTTCCTACATTTAACTGATGAACGTTTTGGAGTGAAGGGGTAGGTATAAAAATAATACTTGAAGATTGGTAAGATAAAGGATTGATATCATTTTACCCAGTTATTTGGGATATAAATAAGTGAAAGAATCTTCTTATCCACGAAATAGGCTTTTCATTTTTCTTAAGAATTAACACAGATGCTTTTTGAAGTTATGTGCTTAACCTTCTGATGGTATCATATTTGGATCTTGATGTTGTGTCAGATTAAATTTTTGTACGTTAAAAGATAGCTCTAGCATAAAGAAAGTGTGCTGTTTTATGCTTGGCTGCATTTATATAATTTTCATTCTTAGAGTTAGTATTTTATATTTTATTTTTAATTGTATAGCTATTAGGGATTTTGTTTGCTCGTCACAGCAGTAACATGCTTTAGTGATGCATTCAGACAAGGATTTAGCTTGAGCATCTAAGTGTAGACATAAAGGTTAGGATGCTTTTTATTGCTGTAGGCGATCATTGTATTTCATGCTTCTAATGTTTCTGATTATACAATATTATCCATGAAATTTGTACTTCCATCTCACTATTTCTAGCACTTCAGTGTACTTTTAGAAATTGAGACAACTGTGTAAGAGTTTGTACGTTGTAATCCGTAAAAGGAATAGCCAACATGAGGATAGGTTGAGGTTAGAGGTTCAAATCCCTCACTCTGCATGTTGTACACATAAAATTATGTTAGAATGTGAAATCTCATAACTAGGGGTATGTAGATTTTCTGTTTGCCTTCGAGGATGGGTGTTTTTTCTCATTGCTCCATCTTTGGTTTCAGCCTACTTCATGCTTTTATCTATTTTAGTGGAAGTTTTGCTTTTTAATGGAAGAAATGATTGTGATTCTGTATTGGTCTAATTTGTGAAGTTCAGTCTTTAGTCTGTTTGTAGGGCAATACTGATTGCATCTCTCTTATTTTACTGTAGATTCTCTTTCCTCAAATCTACAAAACATTTTAATGGCCCCTGCCTTGTGCTAAAGAAATAGTGAATTTGAGGCCAGAACGCTGATTTATGTTAGGTGTCATTTGCTTATGTATTTTTTCCTTAATGATTACACTGAATTTTTTCAAACCACAAAGAGCAGTAAAGAGGTACATTTTGACAACTTCTTTCTGTTAACTTTCGCAGGTTGGAGTTCTCCTTCGGGCAATGGGATATCCTTCTAAAACAATTGTCTATGTAGCAGGGTCTGAAACTTTTGGTGGCCAGCGTATGCTGATCCCTCTGCGTTCAATGTTTAACAATTTGGTCGATCGCACTTCTTTTTGCAGCAAGGAGGAGTTAGACTCCTTATTTGGACCTGAGTCTGCTCTTCCTCTTGATCTTTACCGACCTCCTCCTTCTAAAAGTGAGCAACAACTGAAAGATGAGTGGAACAAGGCTGGTCCTCGGCCAAGGCCTCTTCCTCCACCTCCAGATAGACCTATCTATCGTCATGAGAAAGAAGGATGGTATGGTTGGATTACAGAGACTGATAAAGAACCTGACCCTTCACCAATGGATATGAGGTTGCAAGCCCATCGGTTACTTTTGGATGCTCTTGATTACATGGTTTGTCTTGAAGCTGATGCATTCTTTCCGGGTTTTAACAATGATGGTAGCAGTTGGCCAGATTTTTCAAGCTTGGTCATGGGACAACGACTGTATGAGAGTTCTTCATCTAGGACATATCGACCTGACAGGTATATTAATGATGAGCCACCACTCATTAGTTATTAGCTTATATATATAAAAGGTCTTGAACAGTTGACAAATAAATCCTCATTTTTACAAATCCTATAGATATATAATTAACACTTAATTATTAACCTAACTGTTAATTTTACAAAAGAAATCATTATTTGGGAAAGTTAGTTAGTTACCTAACTCTTCCTATTGATTTTTTGTTATACTGGTTCTAGTGGGATTTTTTTTTTTTTAATAAAAGAACATCCAGCTAAGAGGAATTGATGAAAGCGATATATTTTTGGTACATTGAGACAACATATATGGATGAGTGTTTGATTCCTATGTCTGGAAGTTTTGAAAGCCAACAGTCCTATTTCCAGTGTCATGGGTTGTGGATTCTCTCTGGTATCTAATTTATGGGTATGAGTGAATGTTTGCTTGCTTGCTATGGTATGTTCAAGGAGTCCATTTTTTTTAGTTCCTTTTTAGCTCAACAACATGGGGTTGGAGATCGAACTTTTGGCCTCATAATCGATGGTTAACCAATTGAGCTATTCTCTAGTTGGCTATATTCAATGAGTTTACACTTCTACAAATGAGAATAAGATGCGTTGTATATTGATATTTGTGTACGGAATGATTGTATTTTACAATACAGTTTTTTTCCCATCCACTAAATCTCGTGATAGATAGATTTAGGATTATTCTCTGATTGTTGAACGTATGTATATTGTTGGAGCAGATGTGCGTTTAATTTTTTTTCTTTTCTGACATTTTCTTTTTCCTTAACAGGAAATTCCTGGCAAATCTTCTGAATATTACCCGTGAAAATTTGTATCATCCGATGCACAACTGGACACTTAGAGTGCAGGAGCATCTCAACAAGAGCTTGGGTGAGGAAGGCCTGATAAAACAGGCCATCTTCTCAAAGCCTACATCGTTTCTATCGCATCCACTTCCAGAATGCTTCTGTAGATTGTCTTCTGGTGAAGCACCTGTTCATCTTGTGAAGGAAAAGGGCAAAACTGTTTATGGAGACGAAGAGAAGTGCCCTGACTGGATGTCAGATGGTCAGCAAATCGAATCATTGGACTCGGCCGAGGAAGGGGATAATAAATGGGATGAAGATATTGAATCATCAGAACAAGCAGAGTCTAATTACAATAGTGGGAAAAGCTATTTGGACAATCTCATCGATCAGGACGAAGAAATGGATCCCAACGACTAAAATTGGGTAAGTAGAAATGATATTGGCTTTGGAATGAAGATTTTTTTCTTTTTGTGTAGAGGATAGCGTTTATAGGAAATATAGTGCATGCGATTCATAAACATTTTTCTCAAACATTGAAATCAAGAAAAGTATAGTTGTATCATTTTTTTTTCTCAGAAGAAATTTATAAGTGAGAAGTTGTAGTATGTTCAAAAAAATATTTTTCATATACAGATAGTATATAATTCTTTAAATTTTTTTAGACATTTAAATAATAGAAAAACTTGATTCGAA ATGGTCCTTCCTTCTGGCATGTCCGAACTACAGAGACTCAGATGCAGGGTTGCCTTCCATGCACTCAATTTCCGGCCAGAAGTTCAGATGCTTGGAAAGAAAATAGTGCAGAGGTTACGAGCTTGGGGCCAACCTTTCCTTGCTTTTCATCCTGGATTAGTCAGAGATATTCTGGCATACCATGGTTGTGCTGAACTCTTTCAGGATGTGCACACTGAACTCATACAGTATCGAAGGGCACAGATGATAGAAAAAGGGATTATCAGGGAAGAATTGAGTGTAGATTCCCGCAAACGGAGAGATAACGGTGCCTGCCCTCTAATGCCTGAAGAGGTTGGAGTTCTCCTTCGGGCAATGGGATATCCTTCTAAAACAATTGTCTATGTAGCAGGGTCTGAAACTTTTGGTGGCCAGCGTATGCTGATCCCTCTGCGTTCAATGTTTAACAATTTGGTCGATCGCACTTCTTTTTGCAGCAAGGAGGAGTTAGACTCCTTATTTGGACCTGAGTCTGCTCTTCCTCTTGATCTTTACCGACCTCCTCCTTCTAAAAGTGAGCAACAACTGAAAGATGAGTGGAACAAGGCTGGTCCTCGGCCAAGGCCTCTTCCTCCACCTCCAGATAGACCTATCTATCGTCATGAGAAAGAAGGATGGTATGGTTGGATTACAGAGACTGATAAAGAACCTGACCCTTCACCAATGGATATGAGGTTGCAAGCCCATCGGTTACTTTTGGATGCTCTTGATTACATGGTTTGTCTTGAAGCTGATGCATTCTTTCCGGGTTTTAACAATGATGGTAGCAGTTGGCCAGATTTTTCAAGCTTGGTCATGGGACAACGACTGTATGAGAGTTCTTCATCTAGGACATATCGACCTGACAGGAAATTCCTGGCAAATCTTCTGAATATTACCCGTGAAAATTTGTATCATCCGATGCACAACTGGACACTTAGAGTGCAGGAGCATCTCAACAAGAGCTTGGGTGAGGAAGGCCTGATAAAACAGGCCATCTTCTCAAAGCCTACATCGTTTCTATCGCATCCACTTCCAGAATGCTTCTGTAGATTGTCTTCTGGTGAAGCACCTGTTCATCTTGTGAAGGAAAAGGGCAAAACTGTTTATGGAGACGAAGAGAAGTGCCCTGACTGGATGTCAGATGGTCAGCAAATCGAATCATTGGACTCGGCCGAGGAAGGGGATAATAAATGGGATGAAGATATTGAATCATCAGAACAAGCAGAGTCTAATTACAATAGTGGGAAAAGCTATTTGGACAATCTCATCGATCAGGACGAAGAAATGGATCCCAACGACTAAAATTGGGTAAGTAGAAATGATATTGGCTTTGGAATGAAGATTTTTTTCTTTTTGTGTAGAGGATAGCGTTTATAGGAAATATAGTGCATGCGATTCATAAACATTTTTCTCAAACATTGAAATCAAGAAAAGTATAGTTGTATCATTTTTTTTTCTCAGAAGAAATTTATAAGTGAGAAGTTGTAGTATGTTCAAAAAAATATTTTTCATATACAGATAGTATATAATTCTTTAAATTTTTTTAGACATTTAAATAATAGAAAAACTTGATTCGAA ATGGTCCTTCCTTCTGGCATGTCCGAACTACAGAGACTCAGATGCAGGGTTGCCTTCCATGCACTCAATTTCCGGCCAGAAGTTCAGATGCTTGGAAAGAAAATAGTGCAGAGGTTACGAGCTTGGGGCCAACCTTTCCTTGCTTTTCATCCTGGATTAGTCAGAGATATTCTGGCATACCATGGTTGTGCTGAACTCTTTCAGGATGTGCACACTGAACTCATACAGTATCGAAGGGCACAGATGATAGAAAAAGGGATTATCAGGGAAGAATTGAGTGTAGATTCCCGCAAACGGAGAGATAACGGTGCCTGCCCTCTAATGCCTGAAGAGGTTGGAGTTCTCCTTCGGGCAATGGGATATCCTTCTAAAACAATTGTCTATGTAGCAGGGTCTGAAACTTTTGGTGGCCAGCGTATGCTGATCCCTCTGCGTTCAATGTTTAACAATTTGGTCGATCGCACTTCTTTTTGCAGCAAGGAGGAGTTAGACTCCTTATTTGGACCTGAGTCTGCTCTTCCTCTTGATCTTTACCGACCTCCTCCTTCTAAAAGTGAGCAACAACTGAAAGATGAGTGGAACAAGGCTGGTCCTCGGCCAAGGCCTCTTCCTCCACCTCCAGATAGACCTATCTATCGTCATGAGAAAGAAGGATGGTATGGTTGGATTACAGAGACTGATAAAGAACCTGACCCTTCACCAATGGATATGAGGTTGCAAGCCCATCGGTTACTTTTGGATGCTCTTGATTACATGGTTTGTCTTGAAGCTGATGCATTCTTTCCGGGTTTTAACAATGATGGTAGCAGTTGGCCAGATTTTTCAAGCTTGGTCATGGGACAACGACTGTATGAGAGTTCTTCATCTAGGACATATCGACCTGACAGGAAATTCCTGGCAAATCTTCTGAATATTACCCGTGAAAATTTGTATCATCCGATGCACAACTGGACACTTAGAGTGCAGGAGCATCTCAACAAGAGCTTGGGTGAGGAAGGCCTGATAAAACAGGCCATCTTCTCAAAGCCTACATCGTTTCTATCGCATCCACTTCCAGAATGCTTCTGTAGATTGTCTTCTGGTGAAGCACCTGTTCATCTTGTGAAGGAAAAGGGCAAAACTGTTTATGGAGACGAAGAGAAGTGCCCTGACTGGATGTCAGATGGTCAGCAAATCGAATCATTGGACTCGGCCGAGGAAGGGGATAATAAATGGGATGAAGATATTGAATCATCAGAACAAGCAGAGTCTAATTACAATAGTGGGAAAAGCTATTTGGACAATCTCATCGATCAGGACGAAGAAATGGATCCCAACGACTAA MVLPSGMSELQRLRCRVAFHALNFRPEVQMLGKKIVQRLRAWGQPFLAFHPGLVRDILAYHGCAELFQDVHTELIQYRRAQMIEKGIIREELSVDSRKRRDNGACPLMPEEVGVLLRAMGYPSKTIVYVAGSETFGGQRMLIPLRSMFNNLVDRTSFCSKEELDSLFGPESALPLDLYRPPPSKSEQQLKDEWNKAGPRPRPLPPPPDRPIYRHEKEGWYGWITETDKEPDPSPMDMRLQAHRLLLDALDYMVCLEADAFFPGFNNDGSSWPDFSSLVMGQRLYESSSSRTYRPDRKFLANLLNITRENLYHPMHNWTLRVQEHLNKSLGEEGLIKQAIFSKPTSFLSHPLPECFCRLSSGEAPVHLVKEKGKTVYGDEEKCPDWMSDGQQIESLDSAEEGDNKWDEDIESSEQAESNYNSGKSYLDNLIDQDEEMDPND
BLAST of Lsi03G013170.1 vs. Swiss-Prot
Match: Y1491_ARATH (Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.6e-26 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TrEMBL
Match: A0A0A0LG92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G842640 PE=4 SV=1) HSP 1 Score: 859.8 bits (2220), Expect = 1.5e-246 Identity = 415/439 (94.53%), Postives = 428/439 (97.49%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TrEMBL
Match: M5VVL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002529mg PE=4 SV=1) HSP 1 Score: 656.8 bits (1693), Expect = 1.9e-185 Identity = 311/444 (70.05%), Postives = 372/444 (83.78%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TrEMBL
Match: W9R078_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014733 PE=4 SV=1) HSP 1 Score: 654.8 bits (1688), Expect = 7.3e-185 Identity = 319/446 (71.52%), Postives = 370/446 (82.96%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TrEMBL
Match: V4VU19_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019212mg PE=4 SV=1) HSP 1 Score: 654.4 bits (1687), Expect = 9.5e-185 Identity = 309/439 (70.39%), Postives = 364/439 (82.92%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TrEMBL
Match: A0A067EVN1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006180mg PE=4 SV=1) HSP 1 Score: 652.1 bits (1681), Expect = 4.7e-184 Identity = 308/439 (70.16%), Postives = 363/439 (82.69%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TAIR10
Match: AT3G03810.1 (AT3G03810.1 O-fucosyltransferase family protein) HSP 1 Score: 607.4 bits (1565), Expect = 6.8e-174 Identity = 294/439 (66.97%), Postives = 349/439 (79.50%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TAIR10
Match: AT3G30300.1 (AT3G30300.1 O-fucosyltransferase family protein) HSP 1 Score: 395.6 bits (1015), Expect = 4.0e-110 Identity = 209/442 (47.29%), Postives = 289/442 (65.38%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TAIR10
Match: AT1G04910.1 (AT1G04910.1 O-fucosyltransferase family protein) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-27 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TAIR10
Match: AT5G64600.1 (AT5G64600.1 O-fucosyltransferase family protein) HSP 1 Score: 120.9 bits (302), Expect = 1.9e-27 Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. TAIR10
Match: AT3G26370.1 (AT3G26370.1 O-fucosyltransferase family protein) HSP 1 Score: 112.8 bits (281), Expect = 5.2e-25 Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. NCBI nr
Match: gi|449446891|ref|XP_004141204.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus]) HSP 1 Score: 859.8 bits (2220), Expect = 2.1e-246 Identity = 415/439 (94.53%), Postives = 428/439 (97.49%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. NCBI nr
Match: gi|659130036|ref|XP_008464967.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis melo]) HSP 1 Score: 859.0 bits (2218), Expect = 3.7e-246 Identity = 412/440 (93.64%), Postives = 428/440 (97.27%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. NCBI nr
Match: gi|595817622|ref|XP_007204235.1| (hypothetical protein PRUPE_ppa002529mg [Prunus persica]) HSP 1 Score: 656.8 bits (1693), Expect = 2.8e-185 Identity = 311/444 (70.05%), Postives = 372/444 (83.78%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. NCBI nr
Match: gi|703067678|ref|XP_010088031.1| (hypothetical protein L484_014733 [Morus notabilis]) HSP 1 Score: 654.8 bits (1688), Expect = 1.0e-184 Identity = 319/446 (71.52%), Postives = 370/446 (82.96%), Query Frame = 1
BLAST of Lsi03G013170.1 vs. NCBI nr
Match: gi|567901922|ref|XP_006443449.1| (hypothetical protein CICLE_v10019212mg [Citrus clementina]) HSP 1 Score: 654.4 bits (1687), Expect = 1.4e-184 Identity = 309/439 (70.39%), Postives = 364/439 (82.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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