Lsi03G005790.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G005790.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
Location	chr03 : 7121685 .. 7129750 (+)
Sequence length	2004

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTGGGTTTTTGAGTGCATCCCCATTTTCTTATTCTTGTTCTTCTTTATTTCCCCATTTGAACTATTATCATTAACTAGGTTGAATTACTTAAAATTACACTCAGCGACCTAATGTATTGATTGATATGCACCCTACTTTAGGCACCTTTTAGGGGTATGCTTCATCTTCAACGAACAGCATTTGCAAGGAGTTATATTGATCGGTGTAGCATAGGATTTAGAGCGTTTAGCAATCAGGGTGCAGCAGCTACTGGCAGTCCTCAGCCTCCCCCACCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGATTTCCGTCTGGACTTAAATGGTCATTCATGCCCAAAGTATCTGATGGCCGCCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACCTGTAAGGACAGGGAAATCATGCGGCATGATCCACACAAACTCTTGGAGGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATTAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGTGAAGGCCAGAAAAGAGGCTTATGAATCTGGATTGTTGGGGAAGAATGCATGTGGATCAGGCTATGATTTTGACGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCACGATTGAAGCCTCCTTTTCCTGCTAATGCAGGATTATACGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCTCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCCAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAACCTTGCACTGTTGAAGAGGAAATGAGCATTCCACTAAAGGAATTAATTGAAAGACACTGTGGAGGGGTTATAGGTGGATGGGATAACTTGCTTGCTGTAATTCCCGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTCATGGATTATGATGCACTAAAGGCTGTCCAGTCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCAATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGATATGCTACAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCTGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCATAGTTATTCTTTCAGGTTTATTTCGAATCTTTTCCACACTAATTTGATTAGCAAACATAAGATGAGCATGTTGTTGTAGCTTTAATTTGGCTTTTATAGCCCAATAATTAAAATGCTCTCTGATATTCATTTGTTTTTTTTTGGATAAAACTCTGATATTCATTTGTTGGTGTGCAACTGAACATTAATCTAATTTATTATTTTACCTCTGTTCTGAAACGGGTATAAATAGTGAAAGAAAGATAAGCCACCTTTGGGAGAAGAGTGGATGATATTAGAAGCCACTTAAAATTCTGTAGCCGACTTGTAATGGAGTGTGCTTCCGTTCTCATTTAAATCAAATTGCAGAACATGATTTCTGCCATGATTTTGTGGGTTTAGCAAATGGCACATGCAGAAATTAATGACTCGCGAGCAGGACCTCTCAATAGCTATTGTGGAACTTTTGATTCTCGTATAATAACAGAAAAGCTAAAAGGAAACTATTGCATTTTTTTAGTGGTTTTCTTTATGATGATTTTATCTATCCCATATTTTCACCTATTCTGGGTGATTCTTCTCTTCTGTAGTTTAGTTAATGATGCAAAAGAGAGTCATTTTGATGCAATCAAGATTCTCCAAGAACCTCTTTATTGAAAATTGAATAGTGAATCTCAACAATAAGTTAAGCCATTATATATAGGCTGAGGGATTAGACTGAAAGGGAAAATTGGGGCCTCAGTAACTAACAGCCTTTTAAGGAAAGGGCTATTTAAAACTAAATAAAAAGGTAATTACATAAGGTATATAACTATTTAACAAGAAATACAAGAAATAGTCTAAACAATACAAGAAATCCCAAGATTAATGAGGCCCTGCATTAAATCCATCCCTCCAAAAATGAATTCGTCCTCGAGTTACGATTGTAAAGAGAACTCATCAGGCGCATAGTATGGAAAGATGTCAGCAACATTGAAGGAATTGCTGATGTGTAGATAAGGAGGAAGGTCTACTTTGTAAGCTTTATCCCCCAGTTTTTCAATGATTGAAAAGGGTCCCAGCTTCTTGTTGGTGAGCTTGTTGTGATGTCCAGAAGGTAAACGAGACTTCCGAAGGTACACCATGACTAAGTCTCCAACAACAAAAGTTTCATCTCGGCGGTGGGAATCTGCTGAAGCTTTGTAAGCAGCATTGGCCTTCATTGGCCTTTTCTAAGTGATCTTTGACTTCTAAATGCATCTTCTGAATCCGAGAGGCCATTGTTTAGATCAATAGGAGATGGGATGTTAGCCAAATCAATAGTTAATCGAGGGAGAGAAGTATATACTATCTCGAATGGGGACTTTCTTGTGGATCTGTTCAACATGTGGTTGAAAGCAAATTCAGCTTGGGCTAATATGAGGTCCCATTGTTTAGGTTATCTCCACTTAAGCAACGAACAAGATTCCCAAGTGTGTGATTAGTGACCTTGGTTTGGCCATCGGTTTGGGATGGCTTGTTGTGCTAAAGAGGAGAGAAGTTCTGAATTTTTTCCATAAGGATCTCCAAAAATGGCTCATGAATTTTACGTCTCTATCAGAAACAATGCTCTTCGGGATGCCGTGTAGTCTAACAATCTCACGAAAAAAAAAAGATCAGCAATATGTAAAGCATCATTAGTTTTTCTACATGGTAAGAAGTGAGCCATCTTACTAAAACGATCAACTACAACCAAAACCGAATCATATCCATGTTGAGTACAAGGTAATCCTAGCACAAAGTTCATGGAGCGATCTCCCAAATTGTATTAGGAATTGTTAAAGGGGTTATATAAGCCTATATTTTGAGAGTTACCTTTGAAAGTTTGACAAATAAAACATCTTTGCACAAAATTATTGACATCTTTATTAAGTTGAGCCCACAAAAATTTAGAAGAGACTGCAACTATTGTTTTGTCACAGCCAAAATGGCCAGCTAAGCCACTAGAGTGTTCCTTAATTATATACTCTAAGGGAAGTATGAGGTATGCATACACAATTTCCTTTGAATAAAAAACCATCAAATATGTGATAATCAAGGCAAGGTTGATGCAGAAGGCATATTTTTCCCAAATATGCTTAAAATTTTGGTCAGCAGCATATAATTCGTTAATATGATCAAAAACAAGAATTTCTCCTTAAAGAAGTGTGAGAAAGGTACTTTTTGGCTTAAGGCATCAGCCACCTTGTTTACCTTTTACCTGAAGTGTGCTTGATGACAAAATCGAATCTTTGGAGGAATTGAAGCCATCTTGCATGCATTCGGCTAATGCTTTTCTGGGATTGAAAAAACTTAAAGAGAGAAATGATGAGTTAATAGAATAAAAGCATTGGCAAGTAGATAGTGCTCCCATTGTTTAAGAGTGCTAACTAAAGCATAGAGTTCTTGTTCATAGGTGCTCCAATTTTGTCTAGAGGTACTCAGTTTCTCACTAAAATATTCTATAGGGTGTCCTTCTTGACTTAAGACAGCACCAATACCAATTCCACAAGCATCCACAGACACTTCAAATGGCTAGGAAAAATTTGGTAAACACAAAATTGGAGTTGAAGAGAGGTGTTTAAGGATTGAAAAGCTTGTTTGTTGAGGTTCCCCCAAGAAAAATTTCCTTTTCTTAAGCAGTTTGTAAGAGGAGCAGCTACCGAACTAAAATTCTTAATGAATTTATGATAAAATGAAGCCAAACCTAAGAAGGATTGGAGGGCACGGATGGTCTGTGGAGTAGGCCAACCCATAATTGCATCCACCTTCTTAGGGTCCACTGCAATCCCTTTAGAGCTGATGAAGAAACCTAAAAAAGAAATTTTTGCACATAGAAAGATACACTTCTTGCTGTCTATATACAATTTATTCTCACAGAGGGCAGAAAAAACCTTATGAAAATTGCGTAAATGCTCATTTTTAGACTTGCTATAGATAAGTATATCATCAAAATAAATCACCACAAATTTATTTAAAAATGGACTTAAAACTTGGTTCATAAGACGCATAAAGGTGCTAGGAGCATTAGACAAACCAAATGGCATTACGAGCCATTCAAATAGTCCCTCATTTGTTTTAAAAGCCGTTTTCCATTCATCCATTGGTTTTATCCTAATTTGGTGGTAACCATTCTTAAGGTCAACCTTAGAAAATATTGTTGCTTGGCTTAGTTGGGCTAAAAGGTCGGATAACCTAGGTATTGGGAACCTACATTTTACCATTATCTTATTAATGGCCCTACTATCCACACAAAGGCGACAAGAACCATCTTTTGTAGGAGCTAAAAGGGCGGGAACGGCACATGGACTCAAACTAGGTTGAATGTGGCCTTTATTTAAGTAATTTTGCAATTTGTTCATGCAAAATTTGGTATTCCTTAGGGCTCATCCTATAATGTGGTAAATTTGGGAGGGAACTACCGGGTATCAAGTCAATGTGATGTTATATGTTTCATAAAGGTGGTAGAGAATCTGCACAAACAGTGGTGTCAGGAAATTCATTTAGGAGTTGGACTATGGAACAGGGAAAAGGTTCTGTTTTCTAAGCTATGGTATCACCTTTAACAACGAAGGCTACTAAGTCATCTTTATTCATAGAAAACATATCAGGGTCATGTGTACTAAGTCATCTTTATTTGTAGAAAACATATCAGGGCCATGTGTGATAGTAAATAATTGATGATTAGAGCTTTCTTTTTTTGGATGATTTTGTGGATTTTTTTTTTTATCCTCAGTTTTATCTAAAGGTAAAAGAACCACTCTTTTGCCCATCCATGTGAATGAGTATGTATTGCCTCTTCCTCTATGAATTGTTTGGTTATCAAACTGCGAAGGACGGCCTAGGAGAATATGACATGCATCCCTATCTGAAAGATCGCACACAATTTGGTCCTTATAATGTTGCCCGATTGAAAGAGGTATGGTGCAAATTTCATTAACTTGGGTTTCATCCTCTTTTTAATCCAACCTAACTCTATAAGGGTTGGGATGAGGCTCGGGTTTGAGATTCTATGATTGCACCAATTTTTTGGAGACAATATTTTCAGAACTATCACTATCAATAATAACTTGACAGATTTTACTGTGAACTGGACGCCTTGTGCGGAATAATTTGTGCCTTTGAGGGTTGGATTCCATCTTTGGAGTGAGATGTATTCTTTGGAGAATACAAGAGAGTTGATCACCATCAGAACCTGGGGCTATGTATGCAAGATCATAATCCGATTGAGTGCATTCCTTTAAGTTATCTTCATCTTGAATAGTCAGAGTACGTCTTTGCAGGCATTCATTTGAAAGGTGACCATTTTGTCCACACCTGAAACATTTTCCCAAGGAAGGACGGTTATAAGGATTAGAATTTTTCTTAATAGAATTACCTTCTTGGTTCTTGTTGGTAGGATTCTTGATAGCATTTTCATCTTTCTTGGTTTGCTGGCCTATAGTAGATGAACTTCCTTGTTGTACGACTTTACTTTGGTCATAAGAGCTCTCCTTTGTTTGCTGCTGTCTATCCCAATTGCTTCTTCTTTGAAATGTTCTTGCCGGCTTGTTTTCCTCATTTTCTTCCACCTTGGTAGCTAAAGTAACTGCATCTGCAAGATAAGTTAAAGGGTGAAGATTAACCACTTCCTTTATATCATCACGAAGTCCATTTACAAACCTAGAATCTGTTGTTGATTGGTCTCAGGGAGATCATTTCGAGCTCCTAATCGGTGAAATTCTTCCATGTAATCAAGAACCGAACGATTCCCTTGGTTGCAATGTTGGTATTGATTATACAAGATTTGTTGGTAGTTTAAAGGAAGAAACCTTCTCTAAAAAATGAGTCTTAACATTTTTGGCCAACTTTTGGTAGGAGGTTTGCCATAATGGCGTTGGTTGTTTTGTAATTGTTCCCACCAAGCTGACGCACCTCGAGTAAATTTGAAGGCCACTAATTTCACCTTCTTGTCTTCTGGAGTATTAGCAAAATAAAAAAAAGTTCTCAACATTCTTGGCTCATTCCAAGAATTGTTCAATGTCCATTCTTCCCCCAAAGGTCGGTAAGTCAATTTTCATTTTGTAGTCTCGACTTTCTTGGACATTTCTTTCAAACCACTGTCTTCTTGGGTGTCTTGGTCCATGAGCTTGCTGTCCGAAGTAACCAAATTTGCCTTTGTCTGATGATTCCGAATCTTCCATCATAAACCCCGATCTAAAGTTGCCTGGAAGTCTTCCCATATTCTGATTTTCTTCAATTTTTAAGAGATTATGTGGCAACGGTCCTATTTGAACTTCTTGAGGTTCTTGATTGTTTGTTTGGTCATTCCGCATGACTGGTGCTCCTCTTGGTTGATTTTGATGAATGAGGACCATTTGATTTATTTGCAACGTCAGTTGAGCGATAGATTGTTGCATTTCTTGAAATCCTTTCTTCAATTCTTCAACAGACCCTTCAATTGACTGCAAGCGACAACTGTGGGAGGAGGCGTCCGCTTTCATGATGATGTGATGTACTGATCCAATTGTGAACAACATTCGAGCTAAGAGCTTATACCACTTGATGCAATCAAGATATCTCCAAGCACCTCCTTATTGAAAATTGAATAATGAAACTCAACAATAAGCTCAAGCCATTTTATATAGGCCGTGGGATTAAACTGAAAGGGAAAATTGGGGCCTCGGTAACTAACAGCCTTTTAAGGAAAGGGCTGTTTAAAACTTAATACAAAGGTAATTACATAAGGTAAATAACTATTTAACTAAAACAAGAATGTATCCTAAAGAAATACAATAAAGTCTAAACAATACAAGAAATCCCAAGATTAATGAGGCCCTGCATCACATTTTCTGTCCGGTTCTGTAACATTGATGTGTGTGGAGGTGTGACCTTTGTTTTCACTGCTATTCAAGTATATCGTTTACAATATTTATCTTATGATAAAACACTGAAAAACTTCTTCATTCTATGCTTTGTAGGAAATTTCAACTTTGATGGGAATTGCAAATAATGAAACTGCCCCAGATATTTGGATGATTGGTATGATTCAAGCATCTGGAGGTCATGTCTGCATTTTGTTTGCTGTTTCAAAATGACTTATCAGTGGCCTTAAGAAACTCGTTTGTATTCTTTGAAGAGTCTTTGAGGCTAGAATTATTATACATTTTTTTTCCTAGTGTATCAGTGGCCTTAACGCCATTTGCTTACTTATGTTGTACTCATCTGAACTGAAATTTCATCTCCGATGGAACATCAATAAACGGGAAAGTTAAGATGTTCTCCAAAATTTCTGAGTCCTGACCCTAAATATAAAGTAGGTTTCTGGGATTCAACCATGGTGAACTTGGAACCATGTTTTTATTGCATGTTTGAGATGCCTTTGAAAATACAATTTTTTAGTGAAGTAATTTGTTATCATTATTTTTTTAATCAAGTACTTATTGTTTTGAGATGCCTTTGAAAATACAATTTTTTAGTGAAGTAATTTGTTATTATTTTTTTAATCA

mRNA sequence

ATGATGGCACCTTTTAGGGGTATGCTTCATCTTCAACGAACAGCATTTGCAAGGAGTTATATTGATCGGTGTAGCATAGGATTTAGAGCGTTTAGCAATCAGGGTGCAGCAGCTACTGGCAGTCCTCAGCCTCCCCCACCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGATTTCCGTCTGGACTTAAATGGTCATTCATGCCCAAAGTATCTGATGGCCGCCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACCTGTAAGGACAGGGAAATCATGCGGCATGATCCACACAAACTCTTGGAGGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATTAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGTGAAGGCCAGAAAAGAGGCTTATGAATCTGGATTGTTGGGGAAGAATGCATGTGGATCAGGCTATGATTTTGACGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCACGATTGAAGCCTCCTTTTCCTGCTAATGCAGGATTATACGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCTCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCCAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAACCTTGCACTGTTGAAGAGGAAATGAGCATTCCACTAAAGGAATTAATTGAAAGACACTGTGGAGGGGTTATAGGTGGATGGGATAACTTGCTTGCTGTAATTCCCGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTCATGGATTATGATGCACTAAAGGCTGTCCAGTCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCAATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGATATGCTACAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCTGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCATAGTTATTCTTTCAGGAAATTTCAACTTTGATGGGAATTGCAAATAATGAAACTGCCCCAGATATTTGGATGATTGGTATGATTCAAGCATCTGGAGGTCATGTCTGCATTTTGTTTGCTGTTTCAAAATGACTTATCAGTGGCCTTAAGAAACTCGTTTGTATTCTTTGAAGAGTCTTTGAGGCTAGAATTATTATACATTTTTTTTCCTAGTGTATCAGTGGCCTTAACGCCATTTGCTTACTTATGTTGTACTCATCTGAACTGAAATTTCATCTCCGATGGAACATCAATAAACGGGAAAGTTAAGATGTTCTCCAAAATTTCTGAGTCCTGACCCTAAATATAAAGTAGGTTTCTGGGATTCAACCATGGTGAACTTGGAACCATGTTTTTATTGCATGTTTGAGATGCCTTTGAAAATACAATTTTTTAGTGAAGTAATTTGTTATCATTATTTTTTTAATCAAGTACTTATTGTTTTGAGATGCCTTTGAAAATACAATTTTTTAGTGAAGTAATTTGTTATTATTTTTTTAATCA

Coding sequence (CDS)

ATGATGGCACCTTTTAGGGGTATGCTTCATCTTCAACGAACAGCATTTGCAAGGAGTTATATTGATCGGTGTAGCATAGGATTTAGAGCGTTTAGCAATCAGGGTGCAGCAGCTACTGGCAGTCCTCAGCCTCCCCCACCTCCCCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGATCGAATCTTTACCAACTTGTACGGTTTACATGATCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTGCTGATTGGATTGTTAATGAAGTAAAGAAGTCTGGCCTCCGTGGTCGTGGAGGTGCTGGATTTCCGTCTGGACTTAAATGGTCATTCATGCCCAAAGTATCTGATGGCCGCCCTTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACCTGTAAGGACAGGGAAATCATGCGGCATGATCCACACAAACTCTTGGAGGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTACATATACATTAGAGGTGAGTATGTGAACGAACGAAAGAATCTTGTGAAGGCCAGAAAAGAGGCTTATGAATCTGGATTGTTGGGGAAGAATGCATGTGGATCAGGCTATGATTTTGACGTCCACATCCACTATGGTGCTGGTGCTTACATTTGTGGTGAAGAAACAGCTCTGTTAGAAAGCCTTGAAGGGAAACAAGGGAAACCACGATTGAAGCCTCCTTTTCCTGCTAATGCAGGATTATACGGATGTCCTACCACTGTGACAAATGTGGAGACAGTGGCTGTTTCTCCTACTATTTTAAGGCGTGGACCAGAATGGTTTGCCAGTTTTGGGAGAAAGAACAACTCTGGTACCAAATTGTTTTGTGTCTCGGGACATGTGAATAAACCTTGCACTGTTGAAGAGGAAATGAGCATTCCACTAAAGGAATTAATTGAAAGACACTGTGGAGGGGTTATAGGTGGATGGGATAACTTGCTTGCTGTAATTCCCGGAGGTTCTTCAGTTCCATTGCTTCCCAAGCATATATGTGATGATGTACTCATGGATTATGATGCACTAAAGGCTGTCCAGTCTGGATTGGGCACTGCAGCTGTAATTGTTATGGATAAATCAACTGATATTGTGGATGCAATTGCAAGGCTCTCTTATTTTTACAAGCATGAAAGCTGTGGACAGTGCACTCCCTGCAGAGAAGGTACAGGATGGCTGTGGATGATAATGGAAAGAATGAAAGTTGGAAATGCAAAGCTGGAAGAAATTGATATGCTACAAGAGGTTACCAAGCAGATTGAAGGGCACACCATTTGTGCCCTTGGTGATGCTGCTGCTTGGCCAGTGCAGGGTCTTATAAAGAATTTTAGGCCTGAGCTTGAGAGAAGGATTAGAGAACGTGCAGAACGGGAGTTGATCCAGGCCGCTGCATAG

Protein sequence

MMAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA

Homology

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BLAST of Lsi03G005790.1 vs. Swiss-Prot
Match: NDUV1_ARATH (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis thaliana GN=At5g08530 PE=2 SV=1)

HSP 1 Score: 923.3 bits (2385), Expect = 1.1e-267
Identity = 436/486 (89.71%), Postives = 463/486 (95.27%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP RG+L LQR        +R +   R+FS Q A+ + +PQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKG DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNER NL KAR+EAY +GLLGKNACGSGYDF+V+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWF+SFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           +SGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLA+IPGGSSVPL+PK+IC+DVLM
Sbjct: 301 ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           D+DALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           L+QAAA
Sbjct: 481 LLQAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. Swiss-Prot
Match: NDUV1_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium discoideum GN=ndufv1 PE=2 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 1.4e-201
Identity = 322/422 (76.30%), Postives = 374/422 (88.63%), Query Frame = 1


Query: 56  FGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGA 115
           +GGLKD+DRIFTNLYG HD +LKGA+ RGDWY+TK+++ KG DWI+ E+  SGLRGRGGA
Sbjct: 48  YGGLKDKDRIFTNLYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGA 107

Query: 116 GFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMR 175
           GFPSGLKWSFMPK  S  RP YLV+NADE EPGTCKDREIMRHDPHKL+EGCL+AG  MR
Sbjct: 108 GFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMR 167

Query: 176 ATAAYIYIRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEET 235
           A AAYIYIRGE+  E K L +A  EAY++GL+G+NACG+GY FDV++H GAGAYICGEET
Sbjct: 168 ACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGTGYKFDVYVHRGAGAYICGEET 227

Query: 236 ALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNN 295
           AL+ES+EGKQGKPRLKPPFPA AGLYGCPTTVTNVETVAV+PTILRRG  WFASFGR  N
Sbjct: 228 ALIESIEGKQGKPRLKPPFPAMAGLYGCPTTVTNVETVAVAPTILRRGGAWFASFGRPKN 287

Query: 296 SGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKH 355
           +GTKLFC+SGHVN PCTVEEEMSIPL+ELI++HCGGVIGGWDNL  VIPGGSSVP+LPK+
Sbjct: 288 AGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWDNLKGVIPGGSSVPVLPKN 347

Query: 356 ICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTG 415
           ICD+VLMD+D L+  +SGLGTAAVIVM+K TD++ AIARLS FYKHESCGQCTPCREG G
Sbjct: 348 ICDNVLMDFDDLRQHRSGLGTAAVIVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVG 407

Query: 416 WLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRI 475
           WL+ I +R+  GNAK +EID L+E+++QIEGHTICALGDAAAWPVQGLI++FRPE+E RI
Sbjct: 408 WLYDITDRLVTGNAKPDEIDSLEEISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRI 467

Query: 476 RE 477
           ++
Sbjct: 468 KQ 469

[Close]

BLAST of Lsi03G005790.1 vs. Swiss-Prot
Match: NDUV1_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=NDUFV1 PE=1 SV=2)

HSP 1 Score: 700.3 bits (1806), Expect = 1.5e-200
Identity = 327/437 (74.83%), Postives = 371/437 (84.90%), Query Frame = 1


Query: 51  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 110
           P+KT FG LKDEDRIFTNLYG HD  LKGA  RGDWY+TK+++LKG DWI+ EVK SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86

Query: 111 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 170
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 171 VGMRATAAYIYIRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYIC 230
             M A AAYIYIRGE+ NE  NL  A +EAYE+GL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 231 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 290
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFASFG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266

Query: 291 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPL 350
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 351 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 410
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 411 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 470
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 471 ERRIRERAERELIQAAA 488
           E R+++ A++   + AA
Sbjct: 447 EERMQQFAQQHQARQAA 463

[Close]

BLAST of Lsi03G005790.1 vs. Swiss-Prot
Match: NDUV1_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus GN=NDUFV1 PE=2 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 3.4e-200
Identity = 326/437 (74.60%), Postives = 370/437 (84.67%), Query Frame = 1


Query: 51  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 110
           P+KT FG LKDEDRIFTNLYG HD  LKGA+ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 111 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 170
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 171 VGMRATAAYIYIRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYIC 230
             M A AAYIYIRGE+ NE  NL  A +EAYE+GL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 231 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 290
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 291 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPL 350
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 351 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 410
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 411 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 470
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 471 ERRIRERAERELIQAAA 488
           E R++  A++   Q AA
Sbjct: 447 EERMQRFAQQHQAQQAA 463

[Close]

BLAST of Lsi03G005790.1 vs. Swiss-Prot
Match: NDUV1_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN=NDUFV1 PE=1 SV=4)

HSP 1 Score: 698.7 bits (1802), Expect = 4.4e-200
Identity = 325/437 (74.37%), Postives = 370/437 (84.67%), Query Frame = 1


Query: 51  PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLR 110
           P+KT FG LKDEDRIFTNLYG HD  LKG++ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 111 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 170
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146

Query: 171 VGMRATAAYIYIRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYIC 230
             M A AAYIYIRGE+ NE  NL  A +EAYE+GL+GKNACGSGYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 231 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 290
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG  WFA FG
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 291 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPL 350
           R+ NSGTKLF +SGHVN PCTVEEEMS+PLKELIE+H GGV GGWDNLLAVIPGGSS PL
Sbjct: 267 RERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPL 326

Query: 351 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCR 410
           +PK +C+ VLMD+DAL   Q+GLGTAAVIVMD+STDIV AIARL  FYKHESCGQCTPCR
Sbjct: 327 IPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCR 386

Query: 411 EGTGWLWMIMERMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPEL 470
           EG  W+  +M R   G+A+  EID L E++KQIEGHTICALGD AAWPVQGLI++FRPEL
Sbjct: 387 EGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEL 446

Query: 471 ERRIRERAERELIQAAA 488
           E R++  A++   + AA
Sbjct: 447 EERMQRFAQQHQARQAA 463

[Close]

BLAST of Lsi03G005790.1 vs. TrEMBL
Match: A0A0A0LFB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815460 PE=4 SV=1)

HSP 1 Score: 981.5 bits (2536), Expect = 3.8e-283
Identity = 470/486 (96.71%), Postives = 476/486 (97.94%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAPFRGML+LQR + AR YID+  IG RAFS+QGAAA GSPQPP PPPPPEKTHFGGLKD
Sbjct: 1   MAPFRGMLYLQRRSLARCYIDQWGIGLRAFSSQGAAAPGSPQPPAPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL KARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           LIQAAA
Sbjct: 481 LIQAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. TrEMBL
Match: E5GBX7_CUCME (NADH-ubiquinone oxidoreductase flavoprotein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 969.1 bits (2504), Expect = 1.9e-279
Identity = 464/480 (96.67%), Postives = 469/480 (97.71%), Query Frame = 1


Query: 8   MLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKDEDRIFT 67
           ML+LQ    AR YID+  IG RAFS+QGAAA GSPQPPPPPPPPEKTHFGGLKDEDRIFT
Sbjct: 1   MLYLQHRTLARRYIDQWGIGLRAFSSQGAAAPGSPQPPPPPPPPEKTHFGGLKDEDRIFT 60

Query: 68  NLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 127
           NLYGLHDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 61  NLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120

Query: 128 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 187
           KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV
Sbjct: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180

Query: 188 NERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 247
           NERKNL KARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 181 NERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240

Query: 248 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 307
           RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN
Sbjct: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300

Query: 308 KPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 367
           KPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360

Query: 368 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 427
           AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN
Sbjct: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420

Query: 428 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 487
           AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA
Sbjct: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 480

[Close]

BLAST of Lsi03G005790.1 vs. TrEMBL
Match: A0A067K3F8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17933 PE=4 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 7.6e-276
Identity = 453/486 (93.21%), Postives = 468/486 (96.30%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP RG+L LQR A  R + DR  IGFR+ S Q A   GSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPIRGILSLQRAAMIRRHSDRLDIGFRSLSTQAATNAGSPQPPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNER+NL +ARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELI+RHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRI+ERAERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERE 480

Query: 482 LIQAAA 488
           L++AAA
Sbjct: 481 LLEAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. TrEMBL
Match: A0A0D2QNP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G109800 PE=4 SV=1)

HSP 1 Score: 953.4 bits (2463), Expect = 1.1e-274
Identity = 450/486 (92.59%), Postives = 469/486 (96.50%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP +G+L LQR A  R+  +R  +G R+FS QGA   G+PQ PPPPPPPEKTHFGGLKD
Sbjct: 1   MAPIKGILSLQRAAMFRASSERWKLGIRSFSTQGATTAGAPQAPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL +ARKEAYE+GLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLERARKEAYEAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGG+ GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           L++A+A
Sbjct: 481 LLEASA 486

[Close]

BLAST of Lsi03G005790.1 vs. TrEMBL
Match: A0A0D2PVZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G164400 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 4.2e-274
Identity = 451/486 (92.80%), Postives = 468/486 (96.30%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP +G+L LQR A  R+  +R  +G R+FS QGA    +PQ PPPPPPPEKTHFGGLKD
Sbjct: 1   MAPIKGILSLQRAALLRACGERWKLGTRSFSTQGATTADAPQAPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL +ARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           L++A+A
Sbjct: 481 LLEASA 486

[Close]

BLAST of Lsi03G005790.1 vs. TAIR10
Match: AT5G08530.1 (AT5G08530.1 51 kDa subunit of complex I)

HSP 1 Score: 923.3 bits (2385), Expect = 6.2e-269
Identity = 436/486 (89.71%), Postives = 463/486 (95.27%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP RG+L LQR        +R +   R+FS Q A+ + +PQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKG DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNER NL KAR+EAY +GLLGKNACGSGYDF+V+IH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWF+SFGRKNN+GTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           +SGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLA+IPGGSSVPL+PK+IC+DVLM
Sbjct: 301 ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLIPKNICEDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           D+DALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           L+QAAA
Sbjct: 481 LLQAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. NCBI nr
Match: gi|659084977|ref|XP_008443176.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 982.2 bits (2538), Expect = 3.2e-283
Identity = 470/486 (96.71%), Postives = 475/486 (97.74%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAPFRGML+LQ    AR YID+  IG RAFS+QGAAA GSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPFRGMLYLQHRTLARRYIDQWGIGLRAFSSQGAAAPGSPQPPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL KARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           LIQAAA
Sbjct: 481 LIQAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. NCBI nr
Match: gi|778685035|ref|XP_004136606.2| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 981.5 bits (2536), Expect = 5.4e-283
Identity = 470/486 (96.71%), Postives = 476/486 (97.94%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAPFRGML+LQR + AR YID+  IG RAFS+QGAAA GSPQPP PPPPPEKTHFGGLKD
Sbjct: 1   MAPFRGMLYLQRRSLARCYIDQWGIGLRAFSSQGAAAPGSPQPPAPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL KARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE
Sbjct: 421 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           LIQAAA
Sbjct: 481 LIQAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. NCBI nr
Match: gi|307136131|gb|ADN33976.1| (NADH-ubiquinone oxidoreductase flavoprotein [Cucumis melo subsp. melo])

HSP 1 Score: 969.1 bits (2504), Expect = 2.8e-279
Identity = 464/480 (96.67%), Postives = 469/480 (97.71%), Query Frame = 1


Query: 8   MLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKDEDRIFT 67
           ML+LQ    AR YID+  IG RAFS+QGAAA GSPQPPPPPPPPEKTHFGGLKDEDRIFT
Sbjct: 1   MLYLQHRTLARRYIDQWGIGLRAFSSQGAAAPGSPQPPPPPPPPEKTHFGGLKDEDRIFT 60

Query: 68  NLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 127
           NLYGLHDPFLKGAMKRGDW+RTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP
Sbjct: 61  NLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMP 120

Query: 128 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 187
           KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV
Sbjct: 121 KVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYV 180

Query: 188 NERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 247
           NERKNL KARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP
Sbjct: 181 NERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKP 240

Query: 248 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 307
           RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN
Sbjct: 241 RLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFCVSGHVN 300

Query: 308 KPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 367
           KPCTVEEEMSIPLKELIERHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK
Sbjct: 301 KPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALK 360

Query: 368 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 427
           AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN
Sbjct: 361 AVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERMKVGN 420

Query: 428 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 487
           AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA
Sbjct: 421 AKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERELIQAAA 480

[Close]

BLAST of Lsi03G005790.1 vs. NCBI nr
Match: gi|802724199|ref|XP_012085644.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 957.2 bits (2473), Expect = 1.1e-275
Identity = 453/486 (93.21%), Postives = 468/486 (96.30%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP RG+L LQR A  R + DR  IGFR+ S Q A   GSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPIRGILSLQRAAMIRRHSDRLDIGFRSLSTQAATNAGSPQPPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKG DWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNER+NL +ARKEAYE+GLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLERARKEAYEAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELI+RHCGGV GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRI+ERAERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERE 480

Query: 482 LIQAAA 488
           L++AAA
Sbjct: 481 LLEAAA 486

[Close]

BLAST of Lsi03G005790.1 vs. NCBI nr
Match: gi|823123239|ref|XP_012474721.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 953.4 bits (2463), Expect = 1.6e-274
Identity = 450/486 (92.59%), Postives = 469/486 (96.50%), Query Frame = 1


Query: 2   MAPFRGMLHLQRTAFARSYIDRCSIGFRAFSNQGAAATGSPQPPPPPPPPEKTHFGGLKD 61
           MAP +G+L LQR A  R+  +R  +G R+FS QGA   G+PQ PPPPPPPEKTHFGGLKD
Sbjct: 1   MAPIKGILSLQRAAMFRASSERWKLGIRSFSTQGATTAGAPQAPPPPPPPEKTHFGGLKD 60

Query: 62  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGL 121
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGADWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 122 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 181
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 182 IRGEYVNERKNLVKARKEAYESGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLE 241
           IRGEYVNERKNL +ARKEAYE+GLLGKNACGSGYDFDVHIH+GAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLERARKEAYEAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 242 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 301
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNSGTKLFC 300

Query: 302 VSGHVNKPCTVEEEMSIPLKELIERHCGGVIGGWDNLLAVIPGGSSVPLLPKHICDDVLM 361
           VSGHVNKPCTVEEEMSIPLKELIERHCGG+ GGWDNLLAVIPGGSSVPLLPKHICDDVLM
Sbjct: 301 VSGHVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLLPKHICDDVLM 360

Query: 362 DYDALKAVQSGLGTAAVIVMDKSTDIVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 421
           DYDALKAVQSGLGTAAVIVMDKSTD+VDAIARLSYFYKHESCGQCTPCREGTGWLWMIME
Sbjct: 361 DYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 420

Query: 422 RMKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIKNFRPELERRIRERAERE 481
           R+KVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLI++FRPELERRIRERAERE
Sbjct: 421 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERE 480

Query: 482 LIQAAA 488
           L++A+A
Sbjct: 481 LLEASA 486

The following BLAST results are available for this feature:

BLAST of Lsi03G005790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUV1_ARATH	1.1e-267	89.71	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis tha...	[more]
NDUV1_DICDI	1.4e-201	76.30	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium d...	[more]
NDUV1_BOVIN	1.5e-200	74.83	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=N...	[more]
NDUV1_PONPY	3.4e-200	74.60	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus ...	[more]
NDUV1_HUMAN	4.4e-200	74.37	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN...	[more]

BLAST of Lsi03G005790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFB0_CUCSA	3.8e-283	96.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815460 PE=4 SV=1	[more]
E5GBX7_CUCME	1.9e-279	96.67	NADH-ubiquinone oxidoreductase flavoprotein OS=Cucumis melo subsp. melo PE=4 SV=...	[more]
A0A067K3F8_JATCU	7.6e-276	93.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17933 PE=4 SV=1	[more]
A0A0D2QNP6_GOSRA	1.1e-274	92.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G109800 PE=4 SV=1	[more]
A0A0D2PVZ3_GOSRA	4.2e-274	92.80	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G164400 PE=4 SV=1	[more]

BLAST of Lsi03G005790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08530.1	6.2e-269	89.71	51 kDa subunit of complex I	[more]

BLAST of Lsi03G005790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084977\|ref\|XP_008443176.1\|	3.2e-283	96.71	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|778685035\|ref\|XP_004136606.2\|	5.4e-283	96.71	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|307136131\|gb\|ADN33976.1\|	2.8e-279	96.67	NADH-ubiquinone oxidoreductase flavoprotein [Cucumis melo subsp. melo]	[more]
gi\|802724199\|ref\|XP_012085644.1\|	1.1e-275	93.21	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|823123239\|ref\|XP_012474721.1\|	1.6e-274	92.59	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051287	NAD binding
GO:0016651	oxidoreductase activity, acting on NAD(P)H
GO:0010181	FMN binding
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0051539	4 iron, 4 sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR019575	Nuop51_4Fe4S-bd
IPR019554	Soluble_ligand-bd
IPR011538	Nuo51_FMN-bd
IPR011537	NADH-UbQ_OxRdtase_suF
IPR001949	NADH-UbQ_OxRdtase_51kDa_CS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi03G005790	Lsi03G005790	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G005790.1.CDS.1	Lsi03G005790.1.CDS.1	CDS
Lsi03G005790.1.CDS.2	Lsi03G005790.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi03G005790.1.three_prime_UTR.1	Lsi03G005790.1.three_prime_UTR.1	three_prime_UTR
Lsi03G005790.1.three_prime_UTR.2	Lsi03G005790.1.three_prime_UTR.2	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi03G005790.1	Lsi03G005790.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	PROSITE	PS00644	COMPLEX1_51K_1	coord: 224..239 scor
IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	PROSITE	PS00645	COMPLEX1_51K_2	coord: 401..412 scor
IPR011537	NADH ubiquinone oxidoreductase, F subunit	TIGRFAMs	TIGR01959	TIGR01959	coord: 65..474 score: 5.0E
IPR011538	NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain	PFAM	PF01512	Complex1_51K	coord: 104..273 score: 1.3
IPR019554	Soluble ligand binding domain	PFAM	PF10531	SLBB	coord: 300..349 score: 6.
IPR019575	NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain	PFAM	PF10589	NADH_4Fe-4S	coord: 390..472 score: 2.8
IPR019575	NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain	SMART	SM00928	NADH_4Fe_4S_2	coord: 388..433 score: 8.3
None	No IPR available	PANTHER	PTHR11780	NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1	coord: 37..487 score:
None	No IPR available	unknown	SSF140490	Nqo1C-terminal domain-like	coord: 384..477 score: 1.44
None	No IPR available	unknown	SSF142019	Nqo1 FMN-binding domain-like	coord: 62..297 score: 9.29
None	No IPR available	unknown	SSF142984	Nqo1 middle domain-like	coord: 298..383 score: 4.05