Lsi02G026980.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi02G026980.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr02 : 33384433 .. 33393766 (+)
Sequence length681
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTATCCACTTCTCGAGTGAGGAATTTGAACTTCAAACTTCTTTTTCGATGGAATCTATCGTGATTGATTGTCACCACCTCAGATACATAGATTGAGCTTTATTTTATTTTTAGGATAACTACTATCACAGACATGGTAATTGGTATGTGTCTTTATCTATTGAGTTAGGTTTAAATTGTTAAAAATAGTTTGACTGAGTTTGTTTGATTAATTATTTTGCAAATATTGAATGAATATTCTATTAAACTATGGTTATAGTGAATTTAAGGTATATTTGAAAGTGATTTTGAAATTGTTAAAACCACTTGTCGTGTTCAAAATCACTCTTAAACATATATTTAATCATTGAAAATCAAATTAAGATATTTTGTTTTACACTTTTAAAACCAATTTTCAAACAAACAAAATTGATTTTCAAATGCATATTTGAGAGTAATTTCAATTATAATGGAAGTGAGTTTAACAATTTCAAAATCACTCTCAACATATGCAATTAATACTTTTTTAAAAATTTCTTTAAGGTGGCTTTTTTTTTAGTGTTTTTAGAATGATTATGATCATCTAATCAATGTATTATGATGACTTTAAAAATGTTTTTGATTGACTAAACACTTTTTTAAGCAACCAAAACAAACATTAGAAAGACATCTTTTCAGACTAAAAAAAAAATATGCCAAAGCTGCTAATTCACGAGCAGCTTTGTTCTATTCTCCATAAATTTTTACAAGAACAGAAAAATATTCATCGAGACAGGAAAAGAAGGAACCCTAAACATTTTTGTGAGATGTGGTTGGTTGTGATTCAAGTCAAAGAAGAGATCCTAGTTTAGACGTATCCAATTATTCATTTTTTTAAGAAAAACAAAACACGAAACTTTTTCATAAGAAAAACGTGTCTGAATTTGTGGTTTCATTTTCTCTCCCCCCAAGAGTCTTGCTTACGAGTCACGGTTTTGTCCCAATACAAAAGAAAAATACTAATTAAGGCCCTTAATTGTTTTAATTAAGGGTAAAATGGAATCTTTTTAATAAGAAAATCATGTCCAACTTTTGTTTTTATTCATTATCTTTCCTATTTACCAATGCAAACAAAATATTTGAGATGACTATCTAAAATGTAACTTTAAAGTTATTAATAAATTGAAATGCTTCAAAATGTTCAATCTAAATATAACTTAATTGATTAAGACATATATTCTTGATCAACGGATTCGAGATTTGAATCCAATAATTGCTTCAAAATATATCATAACAAGAGAAAAAAAAAACTTATTTGATATATTGATAGAATAAAATTTTGAATATAGTGAACTAAACAAATTTGTAACTAAAAAACTTATTTGATATATTGATATAATCAATTTTGAATATAGTGAACTAAACAAATTTGTAAATAATTTTTTTTTAAAAAAAATATGAATTAAAGGGTTGTTTTCAAAAATGAAAAAAATATCAAACTATTTACAAATATAGAAAAATTCGCTAATAGATAAGGTTAGACTTCTATCACTGAAGAATTTTTTTTATATTTGTAAATAGTTTGATATTTTTTCTACTTATAATAATTTATCTGAATTAAAAATATTTTAAAAATATTAAAATAAGAAGTATATCAAACTCATCCTAAATATCTTATGCACTCATCTACAAAGTTTTCCTCATCTTTGGATTCCCATTAGGAGAGAGATTATCAGAACCTAGAGAGAGAGAGAGAGTTCCCGAAAGAAGAAAGAGAGGTTGTTGAAAGAAACTATAGAATGAAGGAATAACAATGTGAAAGAATTTTTTAAAAACGGAAAAAATGAAAATTAAATAGTTCTCTATTTTAGTTTATGAGCTTTCATATTATTCCAGGTAGGGTCTCTAGATTTCAAACATTATATATGGTTTGCTTAATTCAACCTCTTTGAGGACCATTTGACTTTTTATTTTTGATTCTTCTAAGTTTCTATGTTTTGTCATTTGTTTTCTAAAACCAAACAAGTCTTGAAATCTAAAAAAAAAAAAAAAATGGTTTTCAAAAACTTTATTTTGTATTTAGAATTTAGCTAGGAATTCAAGTGTTACTTTAAGAAATGTAAAAATCATAATTGAAAAGTTGAGAAAAAACAAGCATAAATTTCAAAAAATTATAAAGGGAATTGTTATCAAAAGGCATGTTTACCTAAAAGAATATTTGAAGCCCCGTGCTATATATTGGTATTAATTAACTACATAGACTAAAAGTAGTATCTTTGGAAATTTTAGAAACTAAAATAGGATATTAAAAAATTTAGGTCCGAGTAACCATTTTGATTTTAATTTTTTGTTTTTGAAATTTATGCTTGTTTTCTCCTAAATTTCATACTATGGTTTTCATATTTCTTGAGAAACACTTGAATCCTTAGTTAAAATTAAAAAACAAAATAAATAAACCTAGATGGAAGTAGTGTTTATAAGTTAGATTAAAAAAAAGCAAATGATTACTAAATGGAGGCCTAAGAATCAAAATAAAAAGGGATTTAGGACTAGTACGAAAATTCATGAAACAAAATAGGATTCAAACCTAAATAATTCACTATGAATCAACTGGTTGGAAGGGAATTAGAATATCCAAAATAAAGATGCCTTGGAATAGATGGATGAGAAAATCAAGGATAGTTGTAGTTGTAGTTGTAGGATAGTATAGAGATTAATTTAGCAGAGATAAATTAATTGGACAAATTAGTAAGGAATTAAAGAAAATTTAATTTAGGCACCTAAGAACTCCCTTGAAATGGACGCCCTATAATGTATTTTTCTTCCTAATATCCTGTAGCTTCCTAGGTATACCAGGAAGAAATATTCATCAAGGAATTCTTTCATGTATGGGTGATGAAACATTGATGTAAATACATACAAAATATCTATGTTTATACACAATAAAATTACCAGGAATCTTGAGCTGGCAATGCAAAGTCCCGTGTAAAGTTTCAGAAAAACGACCGCAAAGCCTCGATGACCTTCTCGGGCCTGTTTATGATAATAAAAAACTTAAAACAATATAGAGAATCTAACATGAGCATAGTTCAACTGACATAAAGCATGTATTGTCAACCAAGAGATAAGAAATTCGAATTTCCTACTCCGTATATTGTTCAACAACTCAAAAAAGTATAACAGTATAGAGAAAGTTATATGCAATGCAAATGATGAATAATTTTACCAGTCCTCTTGGGGCATATGGCCAGCTCCTTCAATTAACTTGAGCTGGATTGTTGTTGAGTTCTGTTTTTGAAACTCTTCTGCAATGGACTGAGGTAGATACTTGTCTGAAATGCCCCAAAGAACAAGACTTGGTTTGTCCCATCTGTAAGCCACAGGAATTTTTGTTATTTATTTATGATGAGCTTTTTTTCATGTGACCTTAATTTCTCATCCTGACATTAAAGCAGAGAAAAAAAGTCACCAGCATACTCTGAACCATTTTATTACAGCCTGACATTCATGCATTTCTGGAGGTGGTTTGGTTTCAGAATGTGTTTAATTTTTACGGTAAATTTTTAGGGCCGCAAATGAAAGTTAAAAGCTTATAAACCTTACTTGAATCTATAAAAAAATTTATTTTTATTTTTTGCTTAGTTACTTTTTACAAATGTTTTTAAAATCTAAATTAAGTTTTCAAAAAAAAAATTATAAAACTTGATTTTGCGTATTGAATTTGGTCGATAATTTTAATGTTTCCTTGAGAAAGCCGAAAGGTGAAGACTCGTAGTGAGAAAACAAGCCTAATTTTCAAAAGTCAAAAACAAAAAACCAAATAGGTTTTTTAAACATCACATTTTCCCTTTTTTCCAGAACTGCCAAAAAAGAAAAAGTTTATCAGATCTTAACAAATTACCATTCCATATCTTAGTTCTAGTATAAAGCTTCTTTTTGTCACTAACTTTTATAAATGTCGATTCTTCTTCTTGTTGTAACATATTCTACTCGAGAGAACTATAAGGCCATTTAGTTCCAAATTTGACATCAATTTGGCACAAGAAATAGACAACAAATCAACATCAGGCCATATGAAATATTTGGTAAGGGCTACGTTAGGAACATTATTAGGATGAATATTATAAATATTATTAAGATGATAGGGACAGAAACTATTTTATGTTAATTTCAGTTTCAACTTTTGTTCCTAACGATGTAGTACTAAAATTTGAAGATAAAGATTAAAATGATTTTTATGTAAAGTTCAACGACCTCAAATGAGATGAAAAATAAGGATTAAACTTTTATTATGAAGAATCAAATGAGTGGTCTCGTTTCTTTTGCGGTTCCCAACTTTTTTAAATGTAGTGTCGAATGATAAATGAAGCGACAGTAACAACTTCATAGAAATACATAATAACATCGAAAAATAGTTAAAAGTAAAGTGAGGAGGTAACAAGAGAAAAACTGACCTCCCAGAAGCAAAGCCAGAAGTTATCCGACTTAATATATCATTGAAATTAGCTTTTCTTGCAGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCGTTTGCAGGATTTCTCCATGGGGCATTGATTACTTGAATAATTTCTCATGGCCCAGGGAATTAATCTTCTGTCATGAGAAACTGATTTTAACTGGTTTTATTTGATAAAAGAGCATGTTACCTAAACTTTAATTGATTAGGGTAATTTAGAGTTATTGTATTGATCGAGTTTAATTGATAAATTTTGCTACTTACCAAAACCAGGTCCTCCACTAGACAAGTATGGAAGTCTATAAACATCGGCCTTTTCCAGCTTTAATACGTATCTACAAGCAGAGAGAATACTCTGTCAGCGTACGCTTACAGTGGATTCCAAAATCAAGAGAAAAACTATTGGATGTATCGTGTACATACATGAAAGTAGAGATGCGGAACATTCTAAATGTACACTTCAATCGTACATCTCAGAAAGAAAACTTCATCGACATGCCCAGATAAGATATCTATCTCATAATCTAAGAATTTGAAATCCCAAAATTTGAAAGAGTAAGGGCCAAAATATGTGAATATTCATCAATTTTATTTTTCACTAGAAGTGTAATTTACAAATCGATCTAACATCTTCTAAAAAAAATAGCAAAAAATGTTAAATTGCAAATTTGGTCCTTATGATCAGAAGAAAGTCATAATTTAGTCTCTCTGGCTTATAATTAGAATTTAGTTCTCGTAAATAGTCCTTAAGGTGTTGTTTGGGGCGCTGAGTTGGTTATTATAGTCTGTAGGTTATAATAGTGGGTGTTTGGGGTGTAAACTATTTTAGTCTGATTACAAATAAGGAGAGAGGATGGTTACAAAATAGTAAACACAATAGACAGTGAGAGTTCTCAAATAGTTTTACGGTAGTAAAGTGTGAATTATAATAATTGGGAACTTCAACAATCCAAAGCAAGTTGGAAGCCCAAACGTCCCCTAAATTCTTAGAGACCATTTAAGAGGATTTTATCAAACCACATTGACTATTTATGAGGTTTTATCAAACCATAAAGACCAAATTCTAACTTAATTACACCAGAAAAAAAAAATACAAAACCAAGATGTTGAGGTTTTACTACTTGCATGATGATTATGGCTCAGCTCACCCCAATAGTTCTTGGGAGTCTGTGTCCAATCCAAGAGACAACTAAAATGGTTATTAAGTTTTTAATTTGGGCTTGAAATTGAAACCTTAGAGAGGGTATCTTCAACATCCCAGGCCCTTGGTACTTAACAAATATCTTATTATATCACAAGTTGCAACACACAACAAACTGTAATTCAGTTATTTTTGTGTACAGAAGAGACTGGTGCACTGAACCTTTTGTGTCACTAAAAGATAATTCATGTATTAATAGTCGCTAAATCTATTGTGCTCTTGTATGAACTCGTAGTCATAACTCTTAATTTAAGTCTAATCTGTATATTGATCTTTTCTGTGGATTTATGGAGATTCTAACGACTCTGTAGTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGTAAACAAACTGAAACATATCAGGAACAAGAACTTGAAAAGAAAAAAAAAAGAAAGGTATTTCAAAGATCAGAAGTGAAACATAAGATTGATTCTTCTTAATAAATTGACGGATGCTTTGCTAGCAAATCAGAACTAAACGGGAAGCAAAAAATTTAGATGACTCAATTAGTTATTTCATCGTATGCCTAAATGAACATTCTGAAACTCATGGTCAAGATTTGAGGAAATGAGTCAAATATAAACAGTTGCTCTATTACATTTTCAATGCATTAGTTAGAATCATCATATTGAACCTTAGCTGTTGAAATAACCCAGGAACAGGAGAAGAAACCGTTAAAGGACTGTTTAGAATGGATATCTTTGAAATCCTGCTCTGATTTTTCAAGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGGTTATTAATGCAGTAGTAGATGTATATTGTTGAGCAGTCAATCTTCATGACACAAGCATGTCAGCTTGGCTATATGTCTAACTTTCTATGAAATACTCTTTCCTGGAAAATTCAGATCTAACCTGAATCACAAGGTTAAAGGGTGTGTTGACATCGAGCACGTCAAGTAGTTTATCCAGTTCCTCGTGGTACTCTTTTTCTGTGTCAATTCAAATATCACATATACTACGAAAGAATATATTCAAACTACTAATTACTATAACACGAGTGATTAAACATTGCCAAAACCTGTATAATTAAAGCCATATCCTGGTTGCGGTTTGTCACTGAAACCGAATCCTATCCAATCAGGAGCAAAACAGTGGAATCCAAGAGCAGACAACTAGCCAATACAACAGAAAAAGTGAAATAAGAAAGGTGAAGTTTCAGACAGAAAAGAAATGCTAAGATATAACTTTAAAATTATCGTCAGATTAAGATTGAAATTTAAGGGCACATGGATGGTCTAACTATCCAAACTCAGTCCTGCCAAATTTCAGTTGTAAGAAAAAAAAATGTAAACAAAATGGGTTGAAGAACTGTACAAGTCTTCAATCTCGACTCTTTGGTTGATAAGTTTATGAGTTCCATGGTTTTGAGATTTTGGTAACTTGATAACAAGAAAGTTTAATGCAGTTTTGAACATTATTTTAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTGTCTCTCTAACAAACCATCTGAATTTCCCAGATTTTACGTAAGAGCCATATTCCTTTCCCTTGTCCTCTATTCTCTATTGAAAGACAAACATGTTAGATGCTTTAAAATGCACCATGTGACGCAGATTCAGCTATAAAAAAAAATCCTTGAAAACTACACAACATTGCGAAAGATTGATGAAATAAACAACTTCCGACATAACAACCCGTGAAATTTCTTGACAAAGAATTGTATAAAAATTTTAAACATTATAATAGAACTAGATAATAGATTTCTCTTATTTTTATAGCCCAGGATTTCCATTGTTTTAAACTTCATAGGGCAATCATTTGATGAAAAAAATAAGGTTAAATAACTGGCAACTTTTATGATTGTGACTATTTAGTCTCTAAACTTTCAAAAGCATCCAATACATCCTTGAACTATCAATTTTGTGTATGAAATCCATGAATTATTAAAAAATAAAAATGAAAAAAAAAGAAGGTCAAGTTTTATTATACACAAAATTAAAAATTAAGAATCGTCACAAACTTAAAAGTTCAATGACCTATTAAACACTTTTTGGAGGTTATGATCAACTGGACATAAAATTAAAAGTTTAGGTATATATTCCTATAGTAGACACTTACAAAGTTTGAGGACTAGAGAGACATAAACCTGAAAGTTTAGTGATGCTTGTAATTTAACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAGCCATCACAACCTTCCCAACACAGTGTAATGGCAACAAATGAAAATTGGAGCTCAAATCTCCCATGACAAATGCTACTCATTTTCAATTGATAGTCCACTTGAACGTAAGAAAAAAAAATAGGTATCATTCACAGTCACGCGTGAGAGAAACACATGAAACACATTGATCCTAAGAACGGAAAAAGAATCAGAGAACAATAAGTCATAGGCGAGTTATCACAATGGACAAGCTCGACCAGATCGGTTCCATGCGTAGCTTGAATCAGTAATTTTCCAAAAAAAACTCACCGATCAATTGACCAATTGGTTATCAGTACGGGGAATTCAATTTTCCGATACATTTACCCGATCGCTGATTTAAAGTTAGTTTTGCTGCCATGGAAAATGAATTGTACTTACATAGAGCATCTGGCCGACATTGCCATCCTCGGCGGGGCTCTCAGGAAGTTGAATCGCACTTCGGCTTGACGGATTGTCAGTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

mRNA sequence

ATGAATGATAACTACTATCACAGACATGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

Coding sequence (CDS)

ATGAATGATAACTACTATCACAGACATGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

Protein sequence

MNDNYYHRHASSKAEKKGKLGKYTVALRITSQNRRIIQSQDDLRYIRATCFNKTFGHNCILACKFTKQGDPIHRAHVNPYDPTRKPFKKDCVKQDLRHNNSIAIRLCWSAMKEDYSSPPAFGRPYKIKRFSMLIIEPNNLEVAEMTYLDEPKRIETGRIGVAIARFVFALGTGCDSSRRSDSCGGGGGGEVAVGFRGGGKGREWIRRRQAERLREHSPGHCLHDRF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi02G026980Lsi02G026980gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi02G026980.1Lsi02G026980.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G026980.1.CDS.1Lsi02G026980.1.CDS.1CDS
Lsi02G026980.1.CDS.2Lsi02G026980.1.CDS.2CDS
Lsi02G026980.1.CDS.3Lsi02G026980.1.CDS.3CDS
Lsi02G026980.1.CDS.4Lsi02G026980.1.CDS.4CDS
Lsi02G026980.1.CDS.5Lsi02G026980.1.CDS.5CDS
Lsi02G026980.1.CDS.6Lsi02G026980.1.CDS.6CDS
Lsi02G026980.1.CDS.7Lsi02G026980.1.CDS.7CDS