Lsi01G014640.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G014640.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cysteine/Histidine-rich C1 domain family protein
Location	chr01 : 12746887 .. 12747462 (-)
Sequence length	576

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCATCGGCGCTGCGATGTCTGCCGTGAATCCATCGACGGCATGTTTTATCGCTGCAACCAGTGCGATTTCGACGTCCACCCACTTTGTACTCAATTCCCTGAGCAGGTCCGCCACGTCCTCGACGGCCACCATAAGCTGACCCTCCGCAAGCTCTCCTCTGGCGGATGTTCTGTTTGCAAAACTGATTGTTCTTCTCTCTGGGTCTACGGCTGCGATGTTTGTGGAGTCAATATTCATCCCAAATGCCTTCTCAAGCCGCACGGTTCGCCGACGAAATCTCGCTCGATGTCATACGCGCACGCGCCGCCGTGGGCGACGGCGCATCAACCGAATGGTTACTATGTGAATCCGTATGGTTATGGTGGTGGCCATTTTCCTTACGGCGGAGTTCCGGCTCCTTGGGGATCTCCGAATCATCATATTGGTCATCCTCCCGTGGCTAATTATGGTGGAAATGCACCGTCGCCGCCGATTTGGGGATCAATTTTTGGGAGCGGAATGTTTGCTCTGGTTCAAAATTTAGCAGCAGGTGCTATTACTGAGTTTATTTTCGGTTCTGCTGGTGCTTAG

mRNA sequence

ATGAACCATCGGCGCTGCGATGTCTGCCGTGAATCCATCGACGGCATGTTTTATCGCTGCAACCAGTGCGATTTCGACGTCCACCCACTTTGTACTCAATTCCCTGAGCAGGTCCGCCACGTCCTCGACGGCCACCATAAGCTGACCCTCCGCAAGCTCTCCTCTGGCGGATGTTCTGTTTGCAAAACTGATTGTTCTTCTCTCTGGGTCTACGGCTGCGATGTTTGTGGAGTCAATATTCATCCCAAATGCCTTCTCAAGCCGCACGGTTCGCCGACGAAATCTCGCTCGATGTCATACGCGCACGCGCCGCCGTGGGCGACGGCGCATCAACCGAATGGTTACTATGTGAATCCGTATGGTTATGGTGGTGGCCATTTTCCTTACGGCGGAGTTCCGGCTCCTTGGGGATCTCCGAATCATCATATTGGTCATCCTCCCGTGGCTAATTATGGTGGAAATGCACCGTCGCCGCCGATTTGGGGATCAATTTTTGGGAGCGGAATGTTTGCTCTGGTTCAAAATTTAGCAGCAGGTGCTATTACTGAGTTTATTTTCGGTTCTGCTGGTGCTTAG

Coding sequence (CDS)

ATGAACCATCGGCGCTGCGATGTCTGCCGTGAATCCATCGACGGCATGTTTTATCGCTGCAACCAGTGCGATTTCGACGTCCACCCACTTTGTACTCAATTCCCTGAGCAGGTCCGCCACGTCCTCGACGGCCACCATAAGCTGACCCTCCGCAAGCTCTCCTCTGGCGGATGTTCTGTTTGCAAAACTGATTGTTCTTCTCTCTGGGTCTACGGCTGCGATGTTTGTGGAGTCAATATTCATCCCAAATGCCTTCTCAAGCCGCACGGTTCGCCGACGAAATCTCGCTCGATGTCATACGCGCACGCGCCGCCGTGGGCGACGGCGCATCAACCGAATGGTTACTATGTGAATCCGTATGGTTATGGTGGTGGCCATTTTCCTTACGGCGGAGTTCCGGCTCCTTGGGGATCTCCGAATCATCATATTGGTCATCCTCCCGTGGCTAATTATGGTGGAAATGCACCGTCGCCGCCGATTTGGGGATCAATTTTTGGGAGCGGAATGTTTGCTCTGGTTCAAAATTTAGCAGCAGGTGCTATTACTGAGTTTATTTTCGGTTCTGCTGGTGCTTAG

Protein sequence

MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVCKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAHAPPWATAHQPNGYYVNPYGYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGAITEFIFGSAGA

Homology

[Close]

BLAST of Lsi01G014640.1 vs. TrEMBL
Match: A0A0A0L121_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.3e-73
Identity = 129/192 (67.19%), Postives = 149/192 (77.60%), Query Frame = 1


Query: 1   MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSV 60
           MNHRRC++CRESI+GMFYRCN CDFDVHPLCTQFPEQ+RH++DG HKLT RKLSSG CS+
Sbjct: 79  MNHRRCNICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGCHKLTFRKLSSGRCSI 138

Query: 61  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAHAPPWATAHQPNGYYVNPY 120
           C+ DCSS WVYGCDVC VNIHPKC+LKP+GSPT +R + Y  AP W TA        +P+
Sbjct: 139 CEEDCSSFWVYGCDVCRVNIHPKCILKPYGSPTGTRGIPYCQAPQWTTA-------PHPH 198

Query: 121 GYGGGHFPYGGVPAPWGSPNHHIGHPPVA-NYGGNAPSPPIWGSIFGSGMFALVQNLAAG 180
           GYGGG+F YGG    WG PNHH+G+P    NYGG  PS P W  + G+GMF +VQNL AG
Sbjct: 199 GYGGGYFSYGGGQPNWGYPNHHVGYPHGGNNYGGQPPSRPSWVPMLGAGMFGVVQNLTAG 258

Query: 181 AITEFIFGSAGA 192
           AI EFIFGS GA
Sbjct: 259 AILEFIFGSFGA 263

[Close]

BLAST of Lsi01G014640.1 vs. TrEMBL
Match: A0A0A0L116_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296890 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38
Identity = 92/188 (48.94%), Postives = 109/188 (57.98%), Query Frame = 1


Query: 3   HRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVCK 62
           HR CDVCRESI   FY C  C F VH  CT+ P  +RH++D  HKL L KLS G CS+CK
Sbjct: 53  HRVCDVCRESIHDNFYHCKDCHFHVHSYCTRLPNNLRHIIDPDHKLCLYKLSYGHCSICK 112

Query: 63  TDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTK-SRSMSYAHAPP-WATAHQPNGYYVNPY 122
            DCSSLWVYGC VC VNIH  CL K     T  SR M + +APP W T   P   +    
Sbjct: 113 EDCSSLWVYGCTVCEVNIHLNCLRKSTVQQTSGSRGMHHHYAPPPWGTWPPPQQQFHG-- 172

Query: 123 GYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGA 182
                          WG PN     P   N+ GN+PS   +GS+FGS MF+LV++L  GA
Sbjct: 173 ---------------WGYPN-----PYNNNHHGNSPSSS-FGSLFGSTMFSLVESLGIGA 217

Query: 183 ITEFIFGS 189
           +T+FIFGS
Sbjct: 233 LTDFIFGS 217

[Close]

BLAST of Lsi01G014640.1 vs. TrEMBL
Match: A0A0A0L2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.9e-38
Identity = 91/212 (42.92%), Postives = 112/212 (52.83%), Query Frame = 1


Query: 1   MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSV 60
           +N R CD+CR+++DG+FYRC  CDFD HPLCTQ P+ + H++D  H L L+K  SGGC+V
Sbjct: 85  LNQRICDICRDAVDGLFYRCKDCDFDAHPLCTQLPKTLHHLIDNKHALNLQKPPSGGCAV 144

Query: 61  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSP--------TKSRSMSYAHAPPWATAHQP 120
           CK DCSS WVYGC +C V IH  CLL+P+ SP         +  S S    PPW     P
Sbjct: 145 CKKDCSSNWVYGCQICRVYIHFDCLLEPYDSPPSQQPSGGVRGTSSSRGIPPPWGGGGPP 204

Query: 121 ----------NGYYVNPYGYGGGHFPYGGVPAPWGSPNH--HIGHP-----PVANYGGNA 180
                     NG Y N YG   GHF  GG     G   H  H G+      P  +Y    
Sbjct: 205 PFPGGGFSWNNGGYHNNYGGQFGHFGMGG-----GHYGHYGHYGYAAPYSVPDYSYPATE 264

Query: 181 PSPPIWGSIFGSGMFALVQNLAAGAITEFIFG 188
            S    G   G  MFALV  L  G ++ F+FG
Sbjct: 265 ASSGSGGKKLGKSMFALVGRLTVGVMSSFVFG 291

[Close]

BLAST of Lsi01G014640.1 vs. TrEMBL
Match: A0A067EA78_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042732mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.6e-33
Identity = 87/195 (44.62%), Postives = 109/195 (55.90%), Query Frame = 1


Query: 2   NHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVC 61
           N R CDVC +SI+G+FYRC  C+FDVHP+CTQ P+QVRHVLD  H LTL+  SS  C VC
Sbjct: 86  NARSCDVCGDSIEGLFYRCKLCEFDVHPVCTQLPQQVRHVLDAAHPLTLQPFSSAWCMVC 145

Query: 62  KTDCSSLWVYGCDVCGVNIHPKCLLKP---------HGSPTKSRSMSYAHAPPWATAHQP 121
           + +C+S W Y C +CGV+IH +CLL P           S T+SRS+    APP   AH  
Sbjct: 146 RNECTS-WRYRCGICGVDIHLECLLTPCDHASRSTSSSSTTRSRSVPQPAAPPAFGAHYA 205

Query: 122 NGYYVNPYGYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFAL 181
           N  Y  P   G  ++ Y GVP  +G  N  + H       GN       G  F   MF +
Sbjct: 206 NYNYGAP-PLGAYNYAY-GVPYGFGPYNSVMSH---QQQQGNEQQAGGGGGRFRRRMFKI 265

Query: 182 VQNLAAGAITEFIFG 188
           V N+A G  T  +FG
Sbjct: 266 VGNIALGVFTNAVFG 274

[Close]

BLAST of Lsi01G014640.1 vs. TrEMBL
Match: A0A0A0KZP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296910 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.9e-31
Identity = 80/190 (42.11%), Postives = 104/190 (54.74%), Query Frame = 1


Query: 3   HRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVCK 62
           H  CDVCRE+I   FY+C  C F VH  CT+ P  +RHV D  HKL L +L  G CS+CK
Sbjct: 43  HLSCDVCRETIHSSFYQCKDCHFYVHSFCTRLPNSLRHVKDPDHKLRLYRLPYGRCSICK 102

Query: 63  TDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAH--APPWATAHQPNGYYVNPY 122
              SSLWVYGC+VC VNIH  CL     + + SRS    H   PPWA        + + +
Sbjct: 103 AKFSSLWVYGCNVCNVNIHINCLQTSTAASSTSRSRGIHHHAPPPWAMGPPSQPDHFHGW 162

Query: 123 GYG---GGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLA 182
           GY      H  +G     + + N+H  +P   N+G         GS+FG  M++LVQ+L 
Sbjct: 163 GYPPDYNNHVQFG-----YNNNNNH-QYPHQMNHGN-------LGSVFGGTMYSLVQSLI 219

Query: 183 AGAITEFIFG 188
            GA+ +FIFG
Sbjct: 223 FGALNDFIFG 219

[Close]

BLAST of Lsi01G014640.1 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 71/204 (34.80%), Postives = 96/204 (47.06%), Query Frame = 1


Query: 2   NHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVC 61
           N R CD+C ES++G+FYRC  C+FDVHPLCTQ P+ VRHVL   H L  R   +  C VC
Sbjct: 86  NDRACDICDESVEGLFYRCKICEFDVHPLCTQLPQHVRHVLHPAHHLEFRPSGASTCMVC 145

Query: 62  KTDCSSLWVYGCDVCGVNIHPKCLL---------KPHGSPTKSRSMSYAHAPPWATAHQP 121
              C S W Y C++C  +IH +C+L         +   S TKSR +      P       
Sbjct: 146 HGPCQS-WRYRCELCRFDIHMECILAVCNTSPSDQTDASGTKSRGLKQQGGQPSPPTQWQ 205

Query: 122 NGYYVNPYGYG--GGHFPYGGV-PAPWGSPNH------HIGHPPVANYGGNAPSPPIWGS 181
             ++  PY YG  G   PY    P  + + N+      + G  P+A    N+     W  
Sbjct: 206 QPHFGYPYAYGPMGQQQPYFNYHPYNYNNFNYMNGYNMNPGQVPMAGASQNSTPSKGW-- 265

Query: 182 IFGSGMFALVQNLAAGAITEFIFG 188
                MF +   L  G ++  IFG
Sbjct: 266 ----RMFTIASKLTMGVVSSAIFG 282

[Close]

BLAST of Lsi01G014640.1 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 62/189 (32.80%), Postives = 86/189 (45.50%), Query Frame = 1


Query: 2   NHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKL-SSGGCSV 61
           N R CD+C ES +G++Y+C  C FDVHPLCTQ P+ VRHV    H L L +  +S  C V
Sbjct: 220 NKRMCDICDESAEGLYYQCEPCGFDVHPLCTQLPQHVRHVPHPAHLLELSQWGASSICMV 279

Query: 62  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAHAPPWATAHQPNGYYVNPY 121
           C+    S W Y C  CG+++H +C +    S   ++        P    +    YY + Y
Sbjct: 280 CRGAIRS-WRYKCGPCGLDVHMEC-ISSSASVAATKIQQRCFGSPQPQFYHSEYYYHHAY 339

Query: 122 GYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGA 181
            Y  G+   G V    G  N            G    P   G   G  MF+++ +L  G 
Sbjct: 340 -YNHGYTNQGQV---HGYANQ-----------GQVQEP---GRSKGRKMFSILMDLTVGV 388

Query: 182 ITEFIFGSA 190
           +   I G A
Sbjct: 400 VCNIIAGPA 388

[Close]

BLAST of Lsi01G014640.1 vs. TAIR10
Match: AT2G37810.1 (AT2G37810.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-13
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 1


Query: 6   CDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKL-SSGGCSVCKTD 65
           C++C   ++G++Y C  C FDVHPLCTQ  + V +V    H L L +  +S  C VC+  
Sbjct: 84  CNICHRLVEGVYYHCETCGFDVHPLCTQHHQHVSYVPHPAHLLELSQCGASNTCMVCRGA 143

Query: 66  CSSLWVYGCDVCGVNIHPKCL 86
             S W Y C  C +++H +C+
Sbjct: 144 ILS-WRYKCGPCMLDVHVECV 163

[Close]

BLAST of Lsi01G014640.1 vs. TAIR10
Match: AT5G59920.1 (AT5G59920.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1


Query: 6   CDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTL----RKLSSG--GCS 65
           CD C++SI+    RC  CDFD+   C   PE++ H  DG H LTL    ++ +SG   C 
Sbjct: 498 CDGCQKSIEDYMLRCKACDFDLCLYCATLPEKIWHRNDG-HPLTLCCGEKEEASGKYWCD 557

Query: 66  VCKTDCS-SLWVYGCDVCGVNIHPKCLL 87
           +C+ +   S+W Y C  CGV +H +C+L
Sbjct: 558 ICEKELDPSIWFYTCYDCGVTLHAQCVL 584

[Close]

BLAST of Lsi01G014640.1 vs. TAIR10
Match: AT4G01350.1 (AT4G01350.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 1


Query: 6   CDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTL------RKLSSGGCS 65
           CD C+++ID    RC  CDFD+   C   P+++ H  DG H LTL             C 
Sbjct: 496 CDGCKKNIDDYMLRCKACDFDLCLYCATLPKKIWHRNDG-HPLTLCCEEKEEASDKYWCD 555

Query: 66  VCKTDCS-SLWVYGCDVCGVNIHPKCLL 87
           +C+ +   S+W Y C  CGV +H +C+L
Sbjct: 556 ICEKELDPSIWFYTCFDCGVTLHAQCVL 582

[Close]

BLAST of Lsi01G014640.1 vs. NCBI nr
Match: gi|659069141|ref|XP_008448356.1| (PREDICTED: uncharacterized protein LOC103490570 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 134/191 (70.16%), Postives = 153/191 (80.10%), Query Frame = 1


Query: 1   MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSV 60
           MNHR+CD+CRESI+GMFYRCN CDFDVHPLCTQFPEQ+RH++DG HKLTLRKLSSG CSV
Sbjct: 77  MNHRQCDICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGRHKLTLRKLSSGRCSV 136

Query: 61  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAHAPPWATAHQPNGYYVNPY 120
           C+TDCSS WVYGCDVC VNIHP+C+L+P+GS T +R +SY  APPW TAHQPN       
Sbjct: 137 CETDCSSFWVYGCDVCRVNIHPRCILRPYGSSTGTRGISYWQAPPWTTAHQPN------- 196

Query: 121 GYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGA 180
           GYGGG+F YGG PA  G PN+H+G+    NYGG  PS P W  + G+GMF LVQNL AGA
Sbjct: 197 GYGGGYFAYGGGPANLGYPNNHVGYSYGGNYGGQPPSRPNWVPMLGAGMFGLVQNLTAGA 256

Query: 181 ITEFIFGSAGA 192
           I EFIFGS GA
Sbjct: 257 IIEFIFGSFGA 260

[Close]

BLAST of Lsi01G014640.1 vs. NCBI nr
Match: gi|449448872|ref|XP_004142189.1| (PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 6.1e-73
Identity = 129/192 (67.19%), Postives = 149/192 (77.60%), Query Frame = 1


Query: 1   MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSV 60
           MNHRRC++CRESI+GMFYRCN CDFDVHPLCTQFPEQ+RH++DG HKLT RKLSSG CS+
Sbjct: 79  MNHRRCNICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGCHKLTFRKLSSGRCSI 138

Query: 61  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTKSRSMSYAHAPPWATAHQPNGYYVNPY 120
           C+ DCSS WVYGCDVC VNIHPKC+LKP+GSPT +R + Y  AP W TA        +P+
Sbjct: 139 CEEDCSSFWVYGCDVCRVNIHPKCILKPYGSPTGTRGIPYCQAPQWTTA-------PHPH 198

Query: 121 GYGGGHFPYGGVPAPWGSPNHHIGHPPVA-NYGGNAPSPPIWGSIFGSGMFALVQNLAAG 180
           GYGGG+F YGG    WG PNHH+G+P    NYGG  PS P W  + G+GMF +VQNL AG
Sbjct: 199 GYGGGYFSYGGGQPNWGYPNHHVGYPHGGNNYGGQPPSRPSWVPMLGAGMFGVVQNLTAG 258

Query: 181 AITEFIFGSAGA 192
           AI EFIFGS GA
Sbjct: 259 AILEFIFGSFGA 263

[Close]

BLAST of Lsi01G014640.1 vs. NCBI nr
Match: gi|449448880|ref|XP_004142193.1| (PREDICTED: uncharacterized protein LOC101203241 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38
Identity = 92/188 (48.94%), Postives = 109/188 (57.98%), Query Frame = 1


Query: 3   HRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVCK 62
           HR CDVCRESI   FY C  C F VH  CT+ P  +RH++D  HKL L KLS G CS+CK
Sbjct: 53  HRVCDVCRESIHDNFYHCKDCHFHVHSYCTRLPNNLRHIIDPDHKLCLYKLSYGHCSICK 112

Query: 63  TDCSSLWVYGCDVCGVNIHPKCLLKPHGSPTK-SRSMSYAHAPP-WATAHQPNGYYVNPY 122
            DCSSLWVYGC VC VNIH  CL K     T  SR M + +APP W T   P   +    
Sbjct: 113 EDCSSLWVYGCTVCEVNIHLNCLRKSTVQQTSGSRGMHHHYAPPPWGTWPPPQQQFHG-- 172

Query: 123 GYGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGA 182
                          WG PN     P   N+ GN+PS   +GS+FGS MF+LV++L  GA
Sbjct: 173 ---------------WGYPN-----PYNNNHHGNSPSSS-FGSLFGSTMFSLVESLGIGA 217

Query: 183 ITEFIFGS 189
           +T+FIFGS
Sbjct: 233 LTDFIFGS 217

[Close]

BLAST of Lsi01G014640.1 vs. NCBI nr
Match: gi|659069133|ref|XP_008448318.1| (PREDICTED: uncharacterized protein LOC103490545, partial [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 92/187 (49.20%), Postives = 111/187 (59.36%), Query Frame = 1


Query: 4   RRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSVCKT 63
           + CDVCRESI G FY C  C F VH  CT  P  +RH++DG H L L KLS G CS+CK 
Sbjct: 9   KNCDVCRESIHGNFYHCKDCHFHVHSYCTHLPNNLRHIMDGDHVLRLYKLSYGHCSICKA 68

Query: 64  DCSSLWVYGCDVCGVNIHPKCLLKPHGSPTK-SRSMSYAHA-PPWATAHQPNGYYVNPYG 123
           DCSSLWVYGC VC VNIH  CL K    PT  SR M + HA PPW T   P  ++   +G
Sbjct: 69  DCSSLWVYGCTVCEVNIHLNCLRKSTVGPTSGSRGMYHHHAQPPWGTWPPPQQHF---HG 128

Query: 124 YGGGHFPYGGVPAPWGSPNHHIGHPPVANYGGNAPSPPIWGSIFGSGMFALVQNLAAGAI 183
           +G  +           + NHH          GN+ S   +GS+FGS MF+LVQNL+ GA+
Sbjct: 129 WGYSY-----------NNNHH----------GNSSSSS-FGSMFGSTMFSLVQNLSIGAL 170

Query: 184 TEFIFGS 189
            +FIFGS
Sbjct: 189 ADFIFGS 170

[Close]

BLAST of Lsi01G014640.1 vs. NCBI nr
Match: gi|449448874|ref|XP_004142190.1| (PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37
Identity = 91/212 (42.92%), Postives = 112/212 (52.83%), Query Frame = 1


Query: 1   MNHRRCDVCRESIDGMFYRCNQCDFDVHPLCTQFPEQVRHVLDGHHKLTLRKLSSGGCSV 60
           +N R CD+CR+++DG+FYRC  CDFD HPLCTQ P+ + H++D  H L L+K  SGGC+V
Sbjct: 85  LNQRICDICRDAVDGLFYRCKDCDFDAHPLCTQLPKTLHHLIDNKHALNLQKPPSGGCAV 144

Query: 61  CKTDCSSLWVYGCDVCGVNIHPKCLLKPHGSP--------TKSRSMSYAHAPPWATAHQP 120
           CK DCSS WVYGC +C V IH  CLL+P+ SP         +  S S    PPW     P
Sbjct: 145 CKKDCSSNWVYGCQICRVYIHFDCLLEPYDSPPSQQPSGGVRGTSSSRGIPPPWGGGGPP 204

Query: 121 ----------NGYYVNPYGYGGGHFPYGGVPAPWGSPNH--HIGHP-----PVANYGGNA 180
                     NG Y N YG   GHF  GG     G   H  H G+      P  +Y    
Sbjct: 205 PFPGGGFSWNNGGYHNNYGGQFGHFGMGG-----GHYGHYGHYGYAAPYSVPDYSYPATE 264

Query: 181 PSPPIWGSIFGSGMFALVQNLAAGAITEFIFG 188
            S    G   G  MFALV  L  G ++ F+FG
Sbjct: 265 ASSGSGGKKLGKSMFALVGRLTVGVMSSFVFG 291

The following BLAST results are available for this feature:

BLAST of Lsi01G014640.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi01G014640.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L121_CUCSA	4.3e-73	67.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1	[more]
A0A0A0L116_CUCSA	1.5e-38	48.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296890 PE=4 SV=1	[more]
A0A0A0L2C5_CUCSA	9.9e-38	42.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1	[more]
A0A067EA78_CITSI	5.6e-33	44.62	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042732mg PE=4 SV=1	[more]
A0A0A0KZP4_CUCSA	6.9e-31	42.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296910 PE=4 SV=1	[more]

BLAST of Lsi01G014640.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37820.1	1.3e-25	34.80	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37800.1	2.1e-18	32.80	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37810.1	7.6e-13	38.27	Cysteine/Histidine-rich C1 domain family protein	[more]
AT5G59920.1	2.2e-12	39.77	Cysteine/Histidine-rich C1 domain family protein	[more]
AT4G01350.1	1.9e-11	36.36	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of Lsi01G014640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069141\|ref\|XP_008448356.1\|	4.5e-76	70.16	PREDICTED: uncharacterized protein LOC103490570 [Cucumis melo]	[more]
gi\|449448872\|ref\|XP_004142189.1\|	6.1e-73	67.19	PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus]	[more]
gi\|449448880\|ref\|XP_004142193.1\|	2.2e-38	48.94	PREDICTED: uncharacterized protein LOC101203241 [Cucumis sativus]	[more]
gi\|659069133\|ref\|XP_008448318.1\|	3.8e-38	49.20	PREDICTED: uncharacterized protein LOC103490545, partial [Cucumis melo]	[more]
gi\|449448874\|ref\|XP_004142190.1\|	1.4e-37	42.92	PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0047134	protein-disulfide reductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011424	C1-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0047134	protein-disulfide reductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G014640	Lsi01G014640	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G014640.1.CDS.1	Lsi01G014640.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G014640.1	Lsi01G014640.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011424	C1-like	PFAM	PF07649	C1_3	coord: 4..31 score: 1.
None	No IPR available	GENE3D	G3DSA:3.30.60.20		coord: 4..33 score: 5.9E-6coord: 46..85 score: 3.
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 2..118 score: 3.4
None	No IPR available	PANTHER	PTHR13871:SF30	CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED	coord: 2..118 score: 3.4
None	No IPR available	unknown	SSF57889	Cysteine-rich domain	coord: 9..89 score: 7.22