Cucsa.397930.5 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTTTCCCTCCTTTCGGCTTTCCTCCAAACCCTCAACCTCCACCAACAACAATTCACTCCAATTCTCCTTCTCTCCTTCTTCATCCATACCCATAAAACCCAATTCAGGATTCACCCCATCTACAGCTTCCACTTTCAATCCATATGGGTACAAGAACACAGCAACCATCCCGGGAAGACGACGATGACGACCTCCCAAGTGGCCCTGGTGCCACCACGATTTCGGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCGAGTCGCAGCGAGCAAACCATGGCCACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCGGGGTCGCAAGGACCCACTGCGTGAGTTTTTTTTTCTTTTTTTTTCATTTCATTTGATGATTCTGCTCAATTTTTCTTTGCCTTGCTGTTGGGTTTTGTGTGTATGTTTGGAGCATGTCGAGTGATATTTAATTTTCATCATGGTGAATGAAAGAGACAGTGAATTGTGTAGTTTTAGTTTTGGTTATTCGAATTGAGTTCTGGGTTTGATTTGATTTCTTGAATGAGATATTGTTTTGGAATAGTAATGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGGCTTCGCCAATTCAGCATGAAAGGTGTTTGACTTAAGCCATTTTTATTAATTCTACCTTCATTGGGTTTGATGTGGCAGGACATGCCTTGAACTGGTGGATCGTGATGTACAATTGAAATTTATAATTCTTTGATTGTTTGACTTCTTTCCAATGCTTGCAGTTTGCGAAAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTAGGTCATTTTACAGCTTCGTGATTTGTAAAAATTTCATCAATTGTGTTCATATGAAAAGCTTCAGTAACTATGATGATGCCTTTTCTTTTCTTTTTATTGGTTTTGTTAATTAAGTCTTGTTTTAGTAACTATTTTGGATCATTTTTGTCGATGTTTGAGGGTGCTATCTCATTGTTCAATGTAGTCATCTATACCTTCCCTTCTTTTTTTTTTCTCCCAGTGTGATACTTTCTGCCTACCAATGAGGCTACCATTGCCTAACTAAACACTCATATCAACTCTAGTTAGTTTTAAAATTAGTCAATATATTAAAATTTTAGGTATCTTCTATTGAATTATGCCGTACTCCAGGAAACTTAATTGCTTGTAACTGCTCATCACTGTGTCAATATAATTCAAAGGTGCTGCAAAATTCTTTATTAGAAAGGAAAAAAGCAGAAAGAAAAGAAAAGAAAAGGAGAAAAGGCTAGAGCACTGTTTATGATTGTCTCAAGTTGCAACTAGAAAGCTGCTTAAACAAGGATTGAACCATTGCCAGTGATGCACTGGTGTATCAAGATGTTTGGTTTCACTTTTCAATCTTGTGTTCTCTCTTACGCCATTCTCAATTTGTGAAATGTGTAATTTTCAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGGTTTCCTGCATATTTTTGCTAGTTGTTTTTGTGCATGAGAGGATAGATGTCACTATATCTTTTACCCTTTTTGAACATTCTAGCAGCAACAGTATGACGAAAAAAATATCAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTGCCACGTACCAGCGTGAATGATATTGAAGAACTAAAGGTTCCATTGCAGTCTACATTTCTTATCTCATGCATCAACCATTTAAATTCTTGTATTACTTATATCTTGTCATTCAACAATGTAGGCGGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGGCATGGATAGCTGTCATTATATTCTTGCTGTTTGTTTCTCATGATTAGCATGGTATTATCATTTTGCAGTCTTGATATCACCTCACGTATCTTAATTGGTTGTTGTGTAAGATATTGTTTGCTTTCATGCTTTTTCTTGCCAATTACTTCTGATAATTGTTGTAACAATTATGTCTCTCTTCCAATTGGAAGACCTTCTTCTTTACCCACATGTCAACTCAGTGGCTATGTAGACTTGACATCTACTCTTTTTCTTGGGAAAATTGAGTTATCTTAAATCAAAAGGTCAAGTTATTGATATGGAAATGTGCTAGTTTATGTGCCACCTTTCGTACTTAAGATTAATTGCTGCATTTGAGTGATAGATTGCGGCTAACGGTGTCTGGTTATCAGTATGTAGGTCTTCAGAACCTAATACAGCGAAATGAACAGTTATTCAATTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGGTAGATTTTCTTCCCTTTTCTTTTAAAGGTATTATCATATTTGATATTATGAATGATCTATCTTTCCTTCTGAACCTTGTGATGAGTAATTTTATTTTATTTTTTGAGAGAAATAAAGTATGATGCTTTTTTTATTGAACAAGTGATAATCAATTGTCAGAGTTTCAAATTCCAAAATCATTATTCTACATTTTCTGTACCATTAATGCATCTGAAGCTTGTGCACTCCTGTACCATGTGTTTGATCCATGCTTGTGTTTTCCTAGATGAAAGGAACTATGATGCTTGTATCTTCTTAGAATTTCCATTCGTCTTCTTAGCTCTTGAGTGGATGAGCATTTAATTGCACCTTTATTGAGCTTTATACACATGCTCCACCATGGGTCAATTTAGGAGTCAAAAGGGCAAGCTATAAACACATATTCCTTTGAAGTTGCATGTTGAATTCCTTTGCTTACCTGCATCAGTTATTAAATATCCTTTTCCATGTTAGAGGATTATGTGTTGTTTTGGGTAATGATAGGCTAAAGAAACATGAAAACTTCAGTTTGGCTCGTGGTAGACTCTTGGACACTCCGACACTTGTCACACAATGAATGTATTAAACACTAGTTGTAAAAAATCAATATAGGTCCAACATTTGTAAACATGTATTGAACGGTTAAACTTTGCATAAATTTTGAGAGTGAAATGCCATTTTTAAGCATAGAAATGGATTAACCTATTGAGTTTTAAATTTTTATGGATTACATATATATTTCAACTTATGTATGGTTTAATGAACACTTGCCTTGCTCTTGTCCTAGATTTTCTTAAAAAGTTATGTGCCACAGTGTCTGCAAATATGTTGTGTTTTTGGAAGTCTTAGGTAGAGCGGATCTCCATAACACAATCAGGAAGCATTTATATCCTAAAAAGACAATGATATTTGTTTGATCTCTACTGTTGGAGAGAACTAAATACTGAATTTAAGATTTAATTTAGTAGGATAATTTTCTTATGCTTTCCTTTCTCCAAGTTAGATGGATGTGAAAAAGAAAAGGATGCAATCAACTCTCTTTTTCTGCTGCCCTTTTTAGCATCGGTTCATTGAGGAATGTGCTTCAAACTTTTATCTGATTTTACTTTTGCCAATAGGGATGTAAATATGCAGCGGTCTTTGGTTCCTTTCATCACTAAAAATATTAACATAAATTTATGAGGTTGTTTCTCATCTAGAAAAATATCGACAACTTTTGGGGTATTTCATACTGTTGGAAAGTGATTTGAACTAGATTTCACTCCGCTGGGGTGTTATCAACTTGTAACAGCATGCAGAGTCTAGCATTTTAAGTCCAAATAATATTTTTATTCTTTCCATTTATCACTCTGTTCGTTTATTTTCCTGAGAAATTTTGAATTTGTAGACGAGGCCTCATGCCACTGTTGAGATAGAAATTTCAGAAGATATGCAGTTGGTCCATTTTGACTTCAACAGGTAGGTCAACATTCTGGTTGTAGGAATGTAATTTGGAGTATTTCCCAATTCCTATATTCTTTTATTTATTTATTTTTAACTAATGGAGGAACTAACCAAGTTTAGGCTTGACAATGACTTCTATTAGCTTTGGACAACCACACGTTGTACATTGGAACTCTGAAAGTAGTTTGATTTTCATTATCGCATGCTGTTCTTGCAGTACTCCTTTTGAGCTCCATGATGACAATTATGTTCTGAAGGCAATGAAATTTTGCAACAGACCTCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCGGGCATGTATCAACCACCCCATATCCCTATTCCTTCATTGTCTAACACGCCGGTTAGAACACCAACCTCACCACCACTTCCTGGAATCATAAAAGCTCGTGTCAAACACGAACATTAATGATCGGTTAGACCGAGCTTAACTTTGAGTGTCTTCTATGTGCATTAATCTCTGCATGATTGTATATTCTGCATGTTCTTACTGCTGTGGCCTTCTTGATTATTGTGGGATCAAATAGGGATAGTTCACTACATCGAACTTCATGCAATCAAATTCATTTAGCTTGAAACTGATTTAAGTCGTTGGGTGGCTTAGAGCTAATTCTTTGCTCCAGATGTTCTTCAACTTTTCTTATACTGTATTTGATTAGTCATATAATGTTCCTCTTTCTATTCCTCATCCTTGTAGAAGTATAGATTTGAGATGTGTTGGGATTGTGGAGGATTGATTAAACTACAGATCATTACGGAATGGGGTTGAACAATGCTACGAATCTGTTTACTTTGTACAGAATTCTAGTTCCAATGCCAAATATTGTCTTATTATATTGTTTCCAGA TCTCTTTCCCTCCTTTCGGCTTTCCTCCAAACCCTCAACCTCCACCAACAACAATTCACTCCAATTCTCCTTCTCTCCTTCTTCATCCATACCCATAAAACCCAATTCAGGATTCACCCCATCTACAGCTTCCACTTTCAATCCATATGGGTACAAGAACACAGCAACCATCCCGGGAAGACGACGATGACGACCTCCCAAGTGGCCCTGGTGCCACCACGATTTCGGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCGAGTCGCAGCGAGCAAACCATGGCCACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCGGGGTCGCAAGGACCCACTGCTAATGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGGCTTCGCCAATTCAGCATGAAAGTTTGCGAAAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAACAGTATGACGAAAAAAATATCAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTGCCACGTACCAGCGTGAATGATATTGAAGAACTAAAGGCGGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAATGAACAGTTATTCAATTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCCACTGTTGAGATAGAAATTTCAGAAGATATGCAGTTGGTCCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGATGACAATTATGTTCTGAAGGCAATGAAATTTTGCAACAGACCTCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCGGGCATGTATCAACCACCCCATATCCCTATTCCTTCATTGTCTAACACGCCGGTTAGAACACCAACCTCACCACCACTTCCTGGAATCATAAAAGCTCGTGTCAAACACGAACATTAATGATCGGTTAGACCGAGCTTAACTTTGAGTGTCTTCTATGTGCATTAATCTCTGCATGATTGTATATTCTGCATGTTCTTACTGCTGTGGCCTTCTTGATTATTGTGGGATCAAATAGGGATAGTTCACTACATCGAACTTCATGCAATCAAATTCATTTAGCTTGAAACTGATTTAAGTCGTTGGGTGGCTTAGAGCTAATTCTTTGCTCCAGATGTTCTTCAACTTTTCTTATACTGTATTTGATTAGTCATATAATGTTCCTCTTTCTATTCCTCATCCTTGTAGAAGTATAGATTTGAGATGTGTTGGGATTGTGGAGGATTGATTAAACTACAGATCATTACGGAATGGGGTTGAACAATGCTACGAATCTGTTTACTTTGTACAGAATTCTAGTTCCAATGCCAAATATTGTCTTATTATATTGTTTCCAGA ATGGGTACAAGAACACAGCAACCATCCCGGGAAGACGACGATGACGACCTCCCAAGTGGCCCTGGTGCCACCACGATTTCGGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCGAGTCGCAGCGAGCAAACCATGGCCACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCGGGGTCGCAAGGACCCACTGCTAATGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGGCTTCGCCAATTCAGCATGAAAGTTTGCGAAAAAGTGGAGAGTAAGGGAAGAACGACATATAACGAGGTTGCAGATGAACTTGTCGCAGAGTTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAACAGTATGACGAAAAAAATATCAGGCGGAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAGGAGATACAATGGAAGGGTCTGCCACGTACCAGCGTGAATGATATTGAAGAACTAAAGGCGGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAACCTAATACAGCGAAATGAACAGTTATTCAATTCGGAGAATGCCCCCAGTGGTGGCGTGTCTTTGCCTTTCATCCTGGTGCAGACGAGGCCTCATGCCACTGTTGAGATAGAAATTTCAGAAGATATGCAGTTGGTCCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGATGACAATTATGTTCTGAAGGCAATGAAATTTTGCAACAGACCTCAATGCGATAATACAGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCGGGCATGTATCAACCACCCCATATCCCTATTCCTTCATTGTCTAACACGCCGGTTAGAACACCAACCTCACCACCACTTCCTGGAATCATAAAAGCTCGTGTCAAACACGAACATTAA MGTRTQQPSREDDDDDLPSGPGATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFNSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCNRPQCDNTAQNFTPDGGEGSSMSGMYQPPHIPIPSLSNTPVRTPTSPPLPGIIKARVKHEH*
BLAST of Cucsa.397930.5 vs. Swiss-Prot
Match: DPB_ARATH (Transcription factor-like protein DPB OS=Arabidopsis thaliana GN=DPB PE=1 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-125 Identity = 246/358 (68.72%), Postives = 273/358 (76.26%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. Swiss-Prot
Match: DPA_ARATH (Transcription factor-like protein DPA OS=Arabidopsis thaliana GN=DPA PE=1 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.9e-60 Identity = 124/256 (48.44%), Postives = 173/256 (67.58%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. Swiss-Prot
Match: TFDP1_HUMAN (Transcription factor Dp-1 OS=Homo sapiens GN=TFDP1 PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 8.6e-49 Identity = 113/240 (47.08%), Postives = 151/240 (62.92%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. Swiss-Prot
Match: TFDP1_MOUSE (Transcription factor Dp-1 OS=Mus musculus GN=Tfdp1 PE=1 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.5e-48 Identity = 116/270 (42.96%), Postives = 161/270 (59.63%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. Swiss-Prot
Match: TFDP1_BOVIN (Transcription factor Dp-1 OS=Bos taurus GN=TFDP1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 9.5e-48 Identity = 115/270 (42.59%), Postives = 160/270 (59.26%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TrEMBL
Match: A0A0A0KZ86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G106850 PE=3 SV=1) HSP 1 Score: 694.9 bits (1792), Expect = 5.0e-197 Identity = 347/348 (99.71%), Postives = 347/348 (99.71%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TrEMBL
Match: W9QN12_9ROSA (Transcription factor-like protein DPB OS=Morus notabilis GN=L484_019689 PE=3 SV=1) HSP 1 Score: 579.3 bits (1492), Expect = 3.1e-162 Identity = 298/354 (84.18%), Postives = 320/354 (90.40%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TrEMBL
Match: M5XJG4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005481mg PE=3 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 7.6e-161 Identity = 292/349 (83.67%), Postives = 310/349 (88.83%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TrEMBL
Match: A0A151SD62_CAJCA (Transcription factor Dp-1 OS=Cajanus cajan GN=KK1_025446 PE=3 SV=1) HSP 1 Score: 565.5 bits (1456), Expect = 4.6e-158 Identity = 291/348 (83.62%), Postives = 316/348 (90.80%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TrEMBL
Match: A0A0L9TB72_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s006200 PE=3 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 5.3e-154 Identity = 281/348 (80.75%), Postives = 309/348 (88.79%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TAIR10
Match: AT5G03415.1 (AT5G03415.1 Transcription factor DP) HSP 1 Score: 451.1 bits (1159), Expect = 6.4e-127 Identity = 246/358 (68.72%), Postives = 273/358 (76.26%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. TAIR10
Match: AT5G02470.1 (AT5G02470.1 Transcription factor DP) HSP 1 Score: 233.8 bits (595), Expect = 1.6e-61 Identity = 124/256 (48.44%), Postives = 173/256 (67.58%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. NCBI nr
Match: gi|449438797|ref|XP_004137174.1| (PREDICTED: transcription factor-like protein DPB isoform X2 [Cucumis sativus]) HSP 1 Score: 699.5 bits (1804), Expect = 2.9e-198 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. NCBI nr
Match: gi|659111261|ref|XP_008455660.1| (PREDICTED: transcription factor-like protein DPB isoform X2 [Cucumis melo]) HSP 1 Score: 696.4 bits (1796), Expect = 2.5e-197 Identity = 345/347 (99.42%), Postives = 347/347 (100.00%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. NCBI nr
Match: gi|778691898|ref|XP_011653374.1| (PREDICTED: transcription factor-like protein DPB isoform X1 [Cucumis sativus]) HSP 1 Score: 694.9 bits (1792), Expect = 7.2e-197 Identity = 347/348 (99.71%), Postives = 347/348 (99.71%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. NCBI nr
Match: gi|659111259|ref|XP_008455659.1| (PREDICTED: transcription factor-like protein DPB isoform X1 [Cucumis melo]) HSP 1 Score: 691.8 bits (1784), Expect = 6.1e-196 Identity = 345/348 (99.14%), Postives = 347/348 (99.71%), Query Frame = 1
BLAST of Cucsa.397930.5 vs. NCBI nr
Match: gi|1009123405|ref|XP_015878523.1| (PREDICTED: transcription factor-like protein DPB isoform X2 [Ziziphus jujuba]) HSP 1 Score: 620.9 bits (1600), Expect = 1.3e-174 Identity = 310/347 (89.34%), Postives = 326/347 (93.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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