Cucsa.394200.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACTGTGGATAAGACGTGTCGATGCCTACCGCGTTTTTGTGCTCCAAGTCGTGTTCTTATCTGACCACTAATTTTACAAACGGTATTTGACGGAGTTGGGTGCGGGGCATCTGGCCCTCCTTGTTCCTTCTACCATTCTCTCCCACCGGCAACCACAAGCGTAAGATGCAGTCGGCATCGCTCCGATTTTTGAGGAATGCGACGTTCGAGATTTGAGCTCAGCTGCGATGGTGGAATGAACGTGCAATTCCTTACACTTATTGAAGATTGAATTTCTTGTTTTCTCTATAGTTTTCACGACCCTTCTCTGTGCATAATCAGAGACTTGACGGAGTCTTCTTCGTCGTGGACTTTTGTTCTCCCGTTTTCACATCGTCGACTCCGTGACAGCCACTTTTAGCTGACACAGATATGTAGCAAATTCTGGCCAGTTTTACTTCTTAGCTTACCTGAATCTCAACTTGCTGTGTCTTTTATCAGAAATTTATAATCAAAATTTTCAACCCCAAAACTCCCGAAAGTCTGGGAATCTCAAAATCCATGTCATAATTGGGAAACTTCAGTTTAGTATGTTGATAGGCATGTATTTATGAAGTATATTTGACATTGAAAGAATTCGAGAGGGGGAGAGAAGGACACCAGATTGATCTGAAATCAAACGTGCTCCGGGATCTTACTGGAGAGCTAGTGATGACGAAAACAAGTACAGAAGTCTCCAAGAATGAGCGTAATGATGTTCTGGAGGCATTAAATCCTGCAATTTCTAATTTTCTTGGGCAGCTTTCTCAGAAACTTCAAAAGTCTCTCAAGGTTAGCCATCTCTGTGTGATCCTGAAAAATATAAGAAAATTTTTAACTTTCATTTGGAACGAATATTTACTTTAAAAAAAAAaaGGCCCGTTGGACAGAAATAAATAGAGAGGAAATCTGGAAATTTTAGACTGAGTTACAATTTTTTtACGTAGAGGTTGACTTGAAACAAAAAaGCAATTCATTATCAAATGTATTGTTGAAAGTTCTCTCTTTCCCGCTCTGTTTTCATTTTGTTTGTTCATTTATTTTCGGTTGCAACCTCAGCTTAAGAAATTGGCTAATGACGGTCAGAAGTTAATGTCAATGACAACGAGCCCTTTCACAAAAGGGGAAAAGAAGGGACCTTCTACATCCTGGGAGCTTGATGTGGAGAAGCAACTACAGGCATGGAGAGAGAACCCTTCATGGACCGACAAACCTCCACAAATAAAGGTGCACAATGACAATCATAATATCAAGATAGAAGGGCATGCTTTCCATTTTAGATATGATGTTCGATGAACAAGAAAATTGATTCTCCTATCATAACTTCTTGGAATTAATGAAATGCACAACTAATCAAGTGTTGTGTGTGGTGAATGCGGAAGGGGATGCGTTTTACTCTTTTAAGCTCTTCATCTGCTTTAATTAGGATTTCATTAAATTGATTATGATATATCCTCAATTACAGAACTCAAGTTTTGAAGTGCCACGTTTTCTTCCTGTAACTCTATAACTTTAACTTTAAGTCTCGTTCTTCCGGTCACACTTTCATCTTTATTTTTACATTTGATTCATTAAGGATGAAGTCTGTTGAACTTAATTCCTGCTTTACTATTTTAATCTATTGATGGCTTTTTAGCTAAAGTCAAAGATGAAAAAAGATGCACTCATTTTTAAATTATAGATTTTAAATATTGCCATCGACAAGTAAAGTTACAGTAGTTCGTTGGATGCGACGTGCCTATTTCCAACACGAATGTGATTGATGTAAAGAAGTAAAAGTTCAAGGACATGGTTAAAATTTTTATAAAAATATAAATTCTAGAAAATACGATTGATGGAAGATATGAAACAAAGTTCTTCGCCTATTTCAGCAGTAAATATGCACTTGGTTTCTGTATTTAGGCTTTTCGAAAATTAAGTTAAATGTATGCATTTCGCAGTAGTTGCTCATAAATACTTCTGAACACTTAAGCTTGAAGATTCATTGTTAGTGATGGTTAGTAAGAAATATATCAGGTCCCCGTATAAGATATTTTTCACCAGAGAAATATACTGAGGCTGATTGAGTTTAAACGGGACTCATTGTAGGTCAGTGTACCAAAAGATACCCTTAGCAGACTCAATGTAAAAGTTGATGTTGGTTTGCCACCAGACGCTGTATATAATATTGTGACAGACCCTGATAACAAGAGAGTCTTCAAGAATATCAAAGTAAGTGATTTCCTTTtATTTCAATTCCAAGCTTTTCACTCTGGCTATTAGTCACACTGATTTTCATTCAATATTTATTGATTGTCAGAATCAAATATTTATACCATCTTTCTTTAATACACATCAAAACAGTGTCTGCTTGATTAGTGCAATTGTTATTGCTCTGTTGCCATAACGAATAACCAAACCACTGATGTCAAGGAAGTGAGGGGAGACCTATGTTAATTGCTCCAAGTCCTAAACCTTTGTGGTTAACTAATAGCGCTGAAGCGGTGTTAAATTTTAGGATTGGTTGGGAGAAAATAAGTAAATTCTGAAAGCAGTTAGGAAGATGTCTTCTTAAAATATTCAAATTTTGTATGGTATAAGTTTAAGACTGTTATTTATAAACCTCAAAACAAAGAAATACGAGGTAGAGGCTAAAGGTGACTTTTGATGAATACACTAACACAAGGTCCATGCTAAACACAATCACAAAAACTATTTTGGAATTTCACAAAAAATACTTTGGTTTCTGTCTATTTAGATAAGAGCCGAGCTATATATCAACGTCAGCTACCGTTCTGCATCTTGCTGTAACTGTATCATCTGCTGAGTTTGGAAAATTTTTCGTTTCAGGAGGTAATATCCAGACGGGTTTTGATCGATGAAGGTTCGAGGCAGGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACAATTTCAGTCCATGTTCTAGTAGATCAAAACAGAGCAGATCACTCAGTAAGCACTGGACACTTTCTTCTTTTGTTCATTATTGTTCAGAACAATAAGAAGATTGTTTCTAGGATATTTTGTAGGAAAAAaTCAGATTCTCGATTTCCTAGTATGTATGAAATTACATGTCTATTCACTTTTGGGAGTTATTTTATTTGAACATTTGCTAGTTCAATATGTGATATTAATGCTCCAATTTGAAAGTTTTATATCCAAGGTACACAAATAGTAATACTGCTCTATGGTCATATCTTGTTGTGACTTGGTTGATGATCATTGGCCTCACAATTGAAAGATTGGTGAGAAGAAATTTCTCGATTTTAATTATCGATTCGATGTTGTTAGATGATGTTCAAGCAACTGAACGCTGGATTTATGAAGAGATTTGAAGGGTGCTGGAGAGTGGAGCCTCTATTTGTTGATGAAAGAATGTGCTTCCCAGTAAAACCAAAGAACTTGGGAGATTATCATGCTTGCACGAAGGGCAAGGGAAGAGTAGGGTCAAGGGTGAGCCTGGAACAGCTAATTGAGCCAGCTATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACTACGAGGACCACTGAGATGCTCATTCTTGATCTGCTTGCTGAGGCTGAAAGAATAAGGGGAGACGTGAAAGGCGAAGTCTTGAACAACGAGCTTGAAATTTCTCACGAAATGTCTGATAGCAACTTATTAGATAGTGTTCTTGATATTAAAGAAAGATGGGCAATGCGTAGAAGATATGCGAAGCAATGTCCTGGGGCAAGAAGGCGCTCTGCAGCCAAATGAATAGCCCCAGTCCCTTTAAAGCAGCACGTTGTATGTATTAACCGCTGATATTTCATTCTACTTTTTCCAGCTATTCATCACAAAGTAGATTACCCAGACATCTCTTTTGTCATCGTGATTTTGCATCAGTTTCTGTACTCTGAAGTCTGGAAGTAAGCCTCAGATTCTTGGTCACGCTTTCACAGGGAATGACAAAAGCCTTTTTtCTTTTTtGTTAGATTT GGACTGTGGATAAGACGTGTCGATGCCTACCGCGTTTTTGTGCTCCAAGTCGTGTTCTTATCTGACCACTAATTTTACAAACGGTATTTGACGGAGTTGGGTGCGGGGCATCTGGCCCTCCTTGTTCCTTCTACCATTCTCTCCCACCGGCAACCACAAGCGTAAGATGCAGTCGGCATCGCTCCGATTTTTGAGGAATGCGACGTTCGAGATTTGAGCTCAGCTGCGATGGTGGAATGAACGTGCAATTCCTTACACTTATTGAAGATTGAATTTCTTGTTTTCTCTATAGTTTTCACGACCCTTCTCTGTGCATAATCAGAGACTTGACGGAGTCTTCTTCGTCGTGGACTTTTGTTCTCCCGTTTTCACATCGTCGACTCCGTGACAGCCACTTTTAGCTGACACAGATATGTAGCAAATTCTGGCCAGTTTTACTTCTTAGCTTACCTGAATCTCAACTTGCTGTGTCTTTTATCAGAAATTTATAATCAAAATTTTCAACCCCAAAACTCCCGAAAGTCTGGGAATCTCAAAATCCATGTCATAATTGGGAAACTTCAGTTTAGTATGTTGATAGGCATGTATTTATGAAGTATATTTGACATTGAAAGAATTCGAGAGGGGGAGAGAAGGACACCAGATTGATCTGAAATCAAACGTGCTCCGGGATCTTACTGGAGAGCTAGTGATGACGAAAACAAGTACAGAAGTCTCCAAGAATGAGCGTAATGATGTTCTGGAGGCATTAAATCCTGCAATTTCTAATTTTCTTGGGCAGCTTTCTCAGAAACTTCAAAAGTCTCTCAAGCTTAAGAAATTGGCTAATGACGGTCAGAAGTTAATGTCAATGACAACGAGCCCTTTCACAAAAGGGGAAAAGAAGGGACCTTCTACATCCTGGGAGCTTGATGTGGAGAAGCAACTACAGGCATGGAGAGAGAACCCTTCATGGACCGACAAACCTCCACAAATAAAGGTCAGTGTACCAAAAGATACCCTTAGCAGACTCAATGTAAAAGTTGATGTTGGTTTGCCACCAGACGCTGTATATAATATTGTGACAGACCCTGATAACAAGAGAGTCTTCAAGAATATCAAAGAGGTAATATCCAGACGGGTTTTGATCGATGAAGGTTCGAGGCAGGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACAATTTCAGTCCATGTTCTAGTAGATCAAAACAGAGCAGATCACTCAATGATGTTCAAGCAACTGAACGCTGGATTTATGAAGAGATTTGAAGGGTGCTGGAGAGTGGAGCCTCTATTTGTTGATGAAAGAATGTGCTTCCCAGTAAAACCAAAGAACTTGGGAGATTATCATGCTTGCACGAAGGGCAAGGGAAGAGTAGGGTCAAGGGTGAGCCTGGAACAGCTAATTGAGCCAGCTATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACTACGAGGACCACTGAGATGCTCATTCTTGATCTGCTTGCTGAGGCTGAAAGAATAAGGGGAGACGTGAAAGGCGAAGTCTTGAACAACGAGCTTGAAATTTCTCACGAAATGTCTGATAGCAACTTATTAGATAGTGTTCTTGATATTAAAGAAAGATGGGCAATGCGTAGAAGATATGCGAAGCAATGTCCTGGGGCAAGAAGGCGCTCTGCAGCCAAATGAATAGCCCCAGTCCCTTTAAAGCAGCACGTTGTATGTATTAACCGCTGATATTTCATTCTACTTTTTCCAGCTATTCATCACAAAGTAGATTACCCAGACATCTCTTTTGTCATCGTGATTTTGCATCAGTTTCTGTACTCTGAAGTCTGGAAGTAAGCCTCAGATTCTTGGTCACGCTTTCACAGGGAATGACAAAAGCCTTTTTTCTTTTTTGTTAGATTT ATGACGAAAACAAGTACAGAAGTCTCCAAGAATGAGCGTAATGATGTTCTGGAGGCATTAAATCCTGCAATTTCTAATTTTCTTGGGCAGCTTTCTCAGAAACTTCAAAAGTCTCTCAAGCTTAAGAAATTGGCTAATGACGGTCAGAAGTTAATGTCAATGACAACGAGCCCTTTCACAAAAGGGGAAAAGAAGGGACCTTCTACATCCTGGGAGCTTGATGTGGAGAAGCAACTACAGGCATGGAGAGAGAACCCTTCATGGACCGACAAACCTCCACAAATAAAGGTCAGTGTACCAAAAGATACCCTTAGCAGACTCAATGTAAAAGTTGATGTTGGTTTGCCACCAGACGCTGTATATAATATTGTGACAGACCCTGATAACAAGAGAGTCTTCAAGAATATCAAAGAGGTAATATCCAGACGGGTTTTGATCGATGAAGGTTCGAGGCAGGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACAATTTCAGTCCATGTTCTAGTAGATCAAAACAGAGCAGATCACTCAATGATGTTCAAGCAACTGAACGCTGGATTTATGAAGAGATTTGAAGGGTGCTGGAGAGTGGAGCCTCTATTTGTTGATGAAAGAATGTGCTTCCCAGTAAAACCAAAGAACTTGGGAGATTATCATGCTTGCACGAAGGGCAAGGGAAGAGTAGGGTCAAGGGTGAGCCTGGAACAGCTAATTGAGCCAGCTATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACTACGAGGACCACTGAGATGCTCATTCTTGATCTGCTTGCTGAGGCTGAAAGAATAAGGGGAGACGTGAAAGGCGAAGTCTTGAACAACGAGCTTGAAATTTCTCACGAAATGTCTGATAGCAACTTATTAGATAGTGTTCTTGATATTAAAGAAAGATGGGCAATGCGTAGAAGATATGCGAAGCAATGTCCTGGGGCAAGAAGGCGCTCTGCAGCCAAATGA MTKTSTEVSKNERNDVLEALNPAISNFLGQLSQKLQKSLKLKKLANDGQKLMSMTTSPFTKGEKKGPSTSWELDVEKQLQAWRENPSWTDKPPQIKVSVPKDTLSRLNVKVDVGLPPDAVYNIVTDPDNKRVFKNIKEVISRRVLIDEGSRQVVELEQAALWRFLWWSGTISVHVLVDQNRADHSMMFKQLNAGFMKRFEGCWRVEPLFVDERMCFPVKPKNLGDYHACTKGKGRVGSRVSLEQLIEPAIVPPPPISWYLRGITTRTTEMLILDLLAEAERIRGDVKGEVLNNELEISHEMSDSNLLDSVLDIKERWAMRRRYAKQCPGARRRSAAK*
BLAST of Cucsa.394200.1 vs. TrEMBL
Match: A0A0A0LKF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348260 PE=4 SV=1) HSP 1 Score: 680.6 bits (1755), Expect = 9.5e-193 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TrEMBL
Match: M5XCB5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008383mg PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-120 Identity = 226/328 (68.90%), Postives = 263/328 (80.18%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TrEMBL
Match: V4TIX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032036mg PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-115 Identity = 211/327 (64.53%), Postives = 251/327 (76.76%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TrEMBL
Match: W9RCW3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027761 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-113 Identity = 211/333 (63.36%), Postives = 253/333 (75.98%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TrEMBL
Match: A0A061E808_THECC (Domain of Uncharacterized protein function isoform 3 OS=Theobroma cacao GN=TCM_010385 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-113 Identity = 204/324 (62.96%), Postives = 251/324 (77.47%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TAIR10
Match: AT1G70480.2 (AT1G70480.2 Domain of unknown function (DUF220)) HSP 1 Score: 372.9 bits (956), Expect = 2.2e-103 Identity = 192/328 (58.54%), Postives = 239/328 (72.87%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TAIR10
Match: AT1G23560.1 (AT1G23560.1 Domain of unknown function (DUF220)) HSP 1 Score: 294.7 bits (753), Expect = 7.4e-80 Identity = 149/325 (45.85%), Postives = 216/325 (66.46%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TAIR10
Match: AT1G23670.2 (AT1G23670.2 Domain of unknown function (DUF220)) HSP 1 Score: 174.1 bits (440), Expect = 1.5e-43 Identity = 98/223 (43.95%), Postives = 141/223 (63.23%), Query Frame = 1
HSP 2 Score: 169.9 bits (429), Expect = 2.8e-42 Identity = 105/268 (39.18%), Postives = 155/268 (57.84%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TAIR10
Match: AT1G23520.1 (AT1G23520.1 Domain of unknown function (DUF220)) HSP 1 Score: 169.5 bits (428), Expect = 3.6e-42 Identity = 89/236 (37.71%), Postives = 143/236 (60.59%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. TAIR10
Match: AT1G23690.1 (AT1G23690.1 Domain of unknown function DUF220) HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39 Identity = 86/260 (33.08%), Postives = 157/260 (60.38%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. NCBI nr
Match: gi|449450642|ref|XP_004143071.1| (PREDICTED: uncharacterized protein LOC101212235 [Cucumis sativus]) HSP 1 Score: 680.6 bits (1755), Expect = 1.4e-192 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. NCBI nr
Match: gi|659087193|ref|XP_008444321.1| (PREDICTED: uncharacterized protein LOC103487688 [Cucumis melo]) HSP 1 Score: 640.2 bits (1650), Expect = 2.0e-180 Identity = 317/337 (94.07%), Postives = 326/337 (96.74%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. NCBI nr
Match: gi|596142677|ref|XP_007222563.1| (hypothetical protein PRUPE_ppa008383mg [Prunus persica]) HSP 1 Score: 441.0 bits (1133), Expect = 1.8e-120 Identity = 226/328 (68.90%), Postives = 263/328 (80.18%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. NCBI nr
Match: gi|645230213|ref|XP_008221831.1| (PREDICTED: uncharacterized protein LOC103321776 [Prunus mume]) HSP 1 Score: 439.5 bits (1129), Expect = 5.3e-120 Identity = 225/328 (68.60%), Postives = 263/328 (80.18%), Query Frame = 1
BLAST of Cucsa.394200.1 vs. NCBI nr
Match: gi|658034998|ref|XP_008353020.1| (PREDICTED: uncharacterized protein LOC103416549 isoform X2 [Malus domestica]) HSP 1 Score: 433.0 bits (1112), Expect = 5.0e-118 Identity = 213/328 (64.94%), Postives = 256/328 (78.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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