Cucsa.384850.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.384850.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reticulon-like protein
Location	scaffold03904 : 273804 .. 275958 (-)
Sequence length	1515

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTAAACATTTTCAGAAATCCGATTCTGTACTCTAAGATCTTCCATTAAACCAATCTCCTCCATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAGTATATCTAAGATTTCTCTATTTGGTGTTCTTGATTGATTTGGTTTCTATCTGTTCTGATTTGATTTGTATGTGTTTATTAGAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGGTCTGCGTCTTAAACTCGAATAAATCGTTAACCATTGTACATTTCTGCGAATGTTTGATCATCTATTAACAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAGTTTCTAATGAATCTTTAATCACCTCAAAATCTGTTAAGAGAGTTCCTAATGTTTATAAGATAGATGGTCATTCCTCCCATTATTAATTGGGTTTGATAAAATCCAATTGATTCTTGTTATAAGGTAAAATTTGAAATTGTAGGAACAATGATGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAACCATAAAACTCAACATCTATGATCATTGAACAATTTCAATTAACTAATCATATAAACTTCAGTGGTTGGATGTTTAATGGATTTAAGTATTTCTGGGGTTTTTCAGGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTTGTTGATTTATGATCGCTACTTTAATCTTCATTCACTTTCAGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGGTAAATAGGAATTCTAGGAAACACCCACTTAAATATAGCTACTTCTGCATTTTGTATGTAAAATGTGATGCTGAAAAAGAAGAATGATGATGGTGGTGGTATTTTACAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGGTAACAATCATGTTAGATGATCTTAGTTTCTTCAATCTCCATTGTTCTAGCTTAATAAAGGATGATTATTAAGCTCTGTCAGGTTTTGTTTGTTACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAGCTGTGATTTGGCTTTAGAGTTTTTTTTACTGCCAACACTGAAGTGTATAATAAACAAATGGGCTGTTTAGAGCTTTTTTACC

mRNA sequence

ACTTAAACATTTTCAGAAATCCGATTCTGTACTCTAAGATCTTCCATTAAACCAATCTCCTCCATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGAACAATGATGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTTGTTGATTTATGATCGCTACTTTAATCTTCATTCACTTTCAGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAGCTGTGATTTGGCTTTAGAGTTTTTTTTACTGCCAACACTGAAGTGTATAATAAACAAATGGGCTGTTTAGAGCTTTTTTACC

Coding sequence (CDS)

ATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGAACAATGATGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTTGTTGA

Protein sequence

MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGIIQQKNHFRTCLKISC*

Homology

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BLAST of Cucsa.384850.2 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.8e-69
Identity = 161/316 (50.95%), Postives = 211/316 (66.77%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNS 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV+FS+FSA+S LGL+ L  +F+SN+
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNT 240

Query: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           +CQR N++ K + F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV PFL+LG
Sbjct: 241 LCQRKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLG 299

Query: 301 AEYGYLITLRRLCAIG 310
           AEYG+LITL RL A G
Sbjct: 301 AEYGHLITLWRLSAFG 299

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BLAST of Cucsa.384850.2 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 8.6e-67
Identity = 156/329 (47.42%), Postives = 217/329 (65.96%), Query Frame = 1


Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFT-RGVSFSIFSAISQL 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF  +G +FS+FSAIS L
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYL 245

Query: 244 GLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEA 303
           GLLFLG++F+SN++ QR  +E + ++ KL EDD+ R+ + +LP  N AI K  ELF GE 
Sbjct: 246 GLLFLGVSFLSNTLRQRVTEEAR-RELKLSEDDVLRIARRMLPITNLAISKTSELFSGEP 305

Query: 304 EMTLKVAPFLILGAEYGYLITLRRLCAIG 310
            MTLKVAPF+++GAEYGYLITL RLCA G
Sbjct: 306 AMTLKVAPFVLMGAEYGYLITLWRLCAFG 327

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BLAST of Cucsa.384850.2 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 61/180 (33.89%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNN-DEKKHKDFKLKE 253
           FG G+    S+ +   ++FS  S ++ +GL++LGL FV  S+  R   +E++HK   ++E
Sbjct: 246 FGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVRE 305

Query: 254 DDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGII 312
           +D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   G +
Sbjct: 306 EDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFL 365

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BLAST of Cucsa.384850.2 vs. TrEMBL
Match: A0A0A0KBW7_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 4.9e-162
Identity = 301/316 (95.25%), Postives = 301/316 (95.25%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF-------SIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF       SIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIG 310
           AEYGYLITLRRLCAIG
Sbjct: 301 AEYGYLITLRRLCAIG 309

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BLAST of Cucsa.384850.2 vs. TrEMBL
Match: U5FMF4_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.6e-96
Identity = 202/331 (61.03%), Postives = 246/331 (74.32%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAIS 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFSIFSAIS
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFSIFSAIS 240

Query: 241 QLGLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCG 300
           QLGLLFLG++F+SNSICQRN+ EK  K FKL E+DI R+ +L+LPAAN AI K R+LF G
Sbjct: 241 QLGLLFLGVSFLSNSICQRNSVEKLRK-FKLTEEDILRVGRLILPAANLAILKTRDLFSG 300

Query: 301 EAEMTLKVAPFLILGAEYGYLITLRRLCAIG 310
           E  MTLKV PFL+LGAEYG+L+TLRRLC IG
Sbjct: 301 EPSMTLKVIPFLLLGAEYGHLVTLRRLCGIG 328

[Close]

BLAST of Cucsa.384850.2 vs. TrEMBL
Match: U5FKU0_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.6e-96
Identity = 202/331 (61.03%), Postives = 246/331 (74.32%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAIS 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFSIFSAIS
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFSIFSAIS 240

Query: 241 QLGLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCG 300
           QLGLLFLG++F+SNSICQRN+ EK  K FKL E+DI R+ +L+LPAAN AI K R+LF G
Sbjct: 241 QLGLLFLGVSFLSNSICQRNSVEKLRK-FKLTEEDILRVGRLILPAANLAILKTRDLFSG 300

Query: 301 EAEMTLKVAPFLILGAEYGYLITLRRLCAIG 310
           E  MTLKV PFL+LGAEYG+L+TLRRLC IG
Sbjct: 301 EPSMTLKVIPFLLLGAEYGHLVTLRRLCGIG 328

[Close]

BLAST of Cucsa.384850.2 vs. TrEMBL
Match: A0A067JJE5_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.1e-96
Identity = 197/330 (59.70%), Postives = 245/330 (74.24%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAI-SSPRRKTPSPS------ 60
           MD TPPSH+S+P S+TKS+SRLA     VE ++ PH S+D I SS +R +P+PS      
Sbjct: 1   MDSTPPSHKSNPNSQTKSASRLARITYSVENEEPPHLSLDLIHSSAKRTSPTPSALSLKS 60

Query: 61  ------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCAS 120
                  QD+L LSPS   K+R+RL DR EM +E   EP  SRRRC+++   L  MGCAS
Sbjct: 61  STNSLSFQDLLLLSPSP-RKARTRLADRLEMAEEAAMEPTGSRRRCKSKAAHLSSMGCAS 120

Query: 121 PRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTP 180
           PR  RRSRRRSE+E +E++DL  L EE  K RKR+ SGRSKKEKLSLVP  S PSSS +P
Sbjct: 121 PRHSRRSRRRSEIEIKEDKDLVGLVEEIGKVRKRRHSGRSKKEKLSLVP--SVPSSSPSP 180

Query: 181 KLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQL 240
           K++  +  +LD+IG +I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS+ SAISQL
Sbjct: 181 KVEAGDESNLDRIGIIIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFSMLSAISQL 240

Query: 241 GLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEA 300
           GLL LG +F+SNSIC+R+N EK+  +FKLKE+DI +L +L+LP AN AI K RELF GE 
Sbjct: 241 GLLLLGASFISNSICRRSNVEKR-SNFKLKEEDILKLGRLILPPANLAISKTRELFSGEP 300

Query: 301 EMTLKVAPFLILGAEYGYLITLRRLCAIGI 311
            MTLKV PFL+LGAEYG+L+TLRRLCA+G+
Sbjct: 301 SMTLKVIPFLLLGAEYGHLVTLRRLCALGL 326

[Close]

BLAST of Cucsa.384850.2 vs. TrEMBL
Match: F6H5G3_VITVI (Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g03190 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 7.0e-92
Identity = 185/319 (57.99%), Postives = 238/319 (74.61%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAV--EADQ----TPHFSVDAISSPRRKTPSPS----IQ 60
           MD  P SH+S+PRS TKS+SR A   E DQ     P  S+D  +    KT SPS    + 
Sbjct: 1   MDSPPLSHQSEPRSGTKSASRPARIGEIDQGGQERPKISLDLSTLSPSKTLSPSNPLPLH 60

Query: 61  DILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRR 120
           ++L LSPS + +SR+RL +R +M +E  E   SRRRC++R  Q+G++GCASPR+ RR RR
Sbjct: 61  ELLLLSPSPLRRSRTRLTERIDMGEEPLEATGSRRRCKSRISQMGVLGCASPRNTRRPRR 120

Query: 121 RSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSL 180
           R E + RE++D  +AEE  K RKR+ SGRS+KEKLSLVP  S PSSS++PK + D+  +L
Sbjct: 121 RVEQDVREDKDFGMAEEMGKLRKRRHSGRSRKEKLSLVP--SVPSSSSSPKANEDDLSNL 180

Query: 181 DQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFV 240
            +IGQL+TDLIMWKD +KSS WFG GS+ F S+CFTRG+SFSIFSAISQLGLLFLGL+F 
Sbjct: 181 HRIGQLVTDLIMWKDASKSSFWFGFGSVCFLSSCFTRGISFSIFSAISQLGLLFLGLSFF 240

Query: 241 SNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFL 300
           SNS+ QR+N EK+ ++FKLKEDDI R+ + +LPA N AI K  +LF GE  MTLKVAPF 
Sbjct: 241 SNSLYQRDNVEKR-REFKLKEDDILRVARAILPATNLAISKTIQLFSGEPSMTLKVAPFF 300

Query: 301 ILGAEYGYLITLRRLCAIG 310
           ++GAEYG+L+T+RRLCA+G
Sbjct: 301 LVGAEYGHLLTVRRLCALG 316

[Close]

BLAST of Cucsa.384850.2 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70
Identity = 161/316 (50.95%), Postives = 211/316 (66.77%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNS 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV+FS+FSA+S LGL+ L  +F+SN+
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNT 240

Query: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           +CQR N++ K + F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV PFL+LG
Sbjct: 241 LCQRKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLG 299

Query: 301 AEYGYLITLRRLCAIG 310
           AEYG+LITL RL A G
Sbjct: 301 AEYGHLITLWRLSAFG 299

[Close]

BLAST of Cucsa.384850.2 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 255.4 bits (651), Expect = 4.8e-68
Identity = 156/329 (47.42%), Postives = 217/329 (65.96%), Query Frame = 1


Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFT-RGVSFSIFSAISQL 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF  +G +FS+FSAIS L
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYL 245

Query: 244 GLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEA 303
           GLLFLG++F+SN++ QR  +E + ++ KL EDD+ R+ + +LP  N AI K  ELF GE 
Sbjct: 246 GLLFLGVSFLSNTLRQRVTEEAR-RELKLSEDDVLRIARRMLPITNLAISKTSELFSGEP 305

Query: 304 EMTLKVAPFLILGAEYGYLITLRRLCAIG 310
            MTLKVAPF+++GAEYGYLITL RLCA G
Sbjct: 306 AMTLKVAPFVLMGAEYGYLITLWRLCAFG 327

[Close]

BLAST of Cucsa.384850.2 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-25
Identity = 61/180 (33.89%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNN-DEKKHKDFKLKE 253
           FG G+    S+ +   ++FS  S ++ +GL++LGL FV  S+  R   +E++HK   ++E
Sbjct: 246 FGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVRE 305

Query: 254 DDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGII 312
           +D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   G +
Sbjct: 306 EDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFL 365

[Close]

BLAST of Cucsa.384850.2 vs. NCBI nr
Match: gi|449463106|ref|XP_004149275.1| (PREDICTED: reticulon-like protein B17 [Cucumis sativus])

HSP 1 Score: 610.9 bits (1574), Expect = 1.3e-171
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNND 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNND
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNND 240

Query: 241 EKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           EKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI
Sbjct: 241 EKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300

Query: 301 TLRRLCAIG 310
           TLRRLCAIG
Sbjct: 301 TLRRLCAIG 309

[Close]

BLAST of Cucsa.384850.2 vs. NCBI nr
Match: gi|659094813|ref|XP_008448255.1| (PREDICTED: reticulon-like protein B17 [Cucumis melo])

HSP 1 Score: 578.9 bits (1491), Expect = 5.4e-162
Identity = 295/309 (95.47%), Postives = 298/309 (96.44%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MD TPPSHRSDPRSR KSSSRLA EADQTPHFSVDAISSPRRKTPSPSIQD+LFLSPSTV
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAFEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE REER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSS TPKLDNDENGS D+IGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSS-TPKLDNDENGSFDRIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAISQLGLLFLGLAFVSNSICQRNND 240
           IMWKD AKSSLWFGLGSLFFFSTCFTRGVSFSIFS ISQLGLLFLGLAFVSNSICQRNN 
Sbjct: 181 IMWKDAAKSSLWFGLGSLFFFSTCFTRGVSFSIFSTISQLGLLFLGLAFVSNSICQRNNV 240

Query: 241 EKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           EKKHKDFKLKEDDIK LVKLVLPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYG+LI
Sbjct: 241 EKKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILGAEYGHLI 300

Query: 301 TLRRLCAIG 310
           TLRRLCAIG
Sbjct: 301 TLRRLCAIG 308

[Close]

BLAST of Cucsa.384850.2 vs. NCBI nr
Match: gi|700191779|gb|KGN46983.1| (hypothetical protein Csa_6G157090 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 7.1e-162
Identity = 301/316 (95.25%), Postives = 301/316 (95.25%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF-------SIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF       SIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIG 310
           AEYGYLITLRRLCAIG
Sbjct: 301 AEYGYLITLRRLCAIG 309

[Close]

BLAST of Cucsa.384850.2 vs. NCBI nr
Match: gi|566211374|ref|XP_006372739.1| (hypothetical protein POPTR_0017s04610g [Populus trichocarpa])

HSP 1 Score: 359.8 bits (922), Expect = 5.2e-96
Identity = 202/331 (61.03%), Postives = 246/331 (74.32%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAIS 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFSIFSAIS
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFSIFSAIS 240

Query: 241 QLGLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCG 300
           QLGLLFLG++F+SNSICQRN+ EK  K FKL E+DI R+ +L+LPAAN AI K R+LF G
Sbjct: 241 QLGLLFLGVSFLSNSICQRNSVEKLRK-FKLTEEDILRVGRLILPAANLAILKTRDLFSG 300

Query: 301 EAEMTLKVAPFLILGAEYGYLITLRRLCAIG 310
           E  MTLKV PFL+LGAEYG+L+TLRRLC IG
Sbjct: 301 EPSMTLKVIPFLLLGAEYGHLVTLRRLCGIG 328

[Close]

BLAST of Cucsa.384850.2 vs. NCBI nr
Match: gi|566211376|ref|XP_006372740.1| (reticulon family protein [Populus trichocarpa])

HSP 1 Score: 359.8 bits (922), Expect = 5.2e-96
Identity = 202/331 (61.03%), Postives = 246/331 (74.32%), Query Frame = 1


Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSIFSAIS 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFSIFSAIS
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFSIFSAIS 240

Query: 241 QLGLLFLGLAFVSNSICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCG 300
           QLGLLFLG++F+SNSICQRN+ EK  K FKL E+DI R+ +L+LPAAN AI K R+LF G
Sbjct: 241 QLGLLFLGVSFLSNSICQRNSVEKLRK-FKLTEEDILRVGRLILPAANLAILKTRDLFSG 300

Query: 301 EAEMTLKVAPFLILGAEYGYLITLRRLCAIG 310
           E  MTLKV PFL+LGAEYG+L+TLRRLC IG
Sbjct: 301 EPSMTLKVIPFLLLGAEYGHLVTLRRLCGIG 328

The following BLAST results are available for this feature:

BLAST of Cucsa.384850.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLQ_ARATH	1.8e-69	50.95	Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1	[more]
RTNLR_ARATH	8.6e-67	47.42	Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2	[more]
RTNLS_ARATH	1.5e-23	33.89	Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2	[more]

BLAST of Cucsa.384850.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW7_CUCSA	4.9e-162	95.25	Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1	[more]
U5FMF4_POPTR	3.6e-96	61.03	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1	[more]
U5FKU0_POPTR	3.6e-96	61.03	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1	[more]
A0A067JJE5_JATCU	6.1e-96	59.70	Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1	[more]
F6H5G3_VITVI	7.0e-92	57.99	Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g03190 PE=4 SV=1	[more]

BLAST of Cucsa.384850.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20590.1	1.0e-70	50.95	Reticulon family protein	[more]
AT4G28430.1	4.8e-68	47.42	Reticulon family protein	[more]
AT5G58000.1	8.6e-25	33.89	Reticulon family protein	[more]

BLAST of Cucsa.384850.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463106\|ref\|XP_004149275.1\|	1.3e-171	100.00	PREDICTED: reticulon-like protein B17 [Cucumis sativus]	[more]
gi\|659094813\|ref\|XP_008448255.1\|	5.4e-162	95.47	PREDICTED: reticulon-like protein B17 [Cucumis melo]	[more]
gi\|700191779\|gb\|KGN46983.1\|	7.1e-162	95.25	hypothetical protein Csa_6G157090 [Cucumis sativus]	[more]
gi\|566211374\|ref\|XP_006372739.1\|	5.2e-96	61.03	hypothetical protein POPTR_0017s04610g [Populus trichocarpa]	[more]
gi\|566211376\|ref\|XP_006372740.1\|	5.2e-96	61.03	reticulon family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.384850	Cucsa.384850	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.384850.2	Cucsa.384850.2-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.384850.2.three_prime_UTR.3	Cucsa.384850.2.three_prime_UTR.3	three_prime_UTR
Cucsa.384850.2.three_prime_UTR.2	Cucsa.384850.2.three_prime_UTR.2	three_prime_UTR
Cucsa.384850.2.three_prime_UTR.1	Cucsa.384850.2.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.384850.2.CDS.5	Cucsa.384850.2.CDS.5	CDS
Cucsa.384850.2.CDS.4	Cucsa.384850.2.CDS.4	CDS
Cucsa.384850.2.CDS.3	Cucsa.384850.2.CDS.3	CDS
Cucsa.384850.2.CDS.2	Cucsa.384850.2.CDS.2	CDS
Cucsa.384850.2.CDS.1	Cucsa.384850.2.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.384850.2.five_prime_UTR.1	Cucsa.384850.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 178..311 score: 2.4
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 24..311 score: 1.2
None	No IPR available	PANTHER	PTHR10994:SF61	RETICULON-LIKE PROTEIN	coord: 24..311 score: 1.2