Cucsa.365950.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAACCTCCTTCATCCAAAACTAACTAATTTACTCTCTAACAAGAACCCACTACTAACCTCCCCATCTTTGTCCGCCACCGCCACCACCAAATGCGGTGGCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGGTAATGTAAGGATTTGGATCTCTCTCTTTTGTGATTCCTGTGTTTGTAGATTGAAAACTGAAGTGGGTTGCACCAATCTTTACTTTGATTTGGACTTCGGGGGAGAaGATTGGTTTTTATTTTTGAGCTGCATAAACCTCAAATTGATTCCTAATTGTATTAGATGGTTAAGTTTATGTGCGAGTCTGTGGATCTGCTTGCTTCAGTTAACACACCGATTTTGGAAATATTTTCATTTGGGGATGGATCTGATATTTTTGGTATGTGGAGCTTGAGTTTCCAGATTTGAACTTCACGAACCCGTTGACTGAAAAACATTAATTTTTTtAGAAGTTGAACAAAAAGGTATTTATACCCTGATTGTTTGTCTAATTATGAGATATAATAAATGACATACTAGTTCTTTGTAAAAGATTTGTGAGTTCAGTCCCAGTATGGTATTAAAGTTCTTTAGATTTTGTTTCTATCACCAATGGAAAGAGATCTTGGCTAATAATTTATTTTTGGTAACCCATATATTAACATTTTCTTTCACACACTGACAGAACCTAGTTTAGAAATTGCAGGGCATCAGTCAACTATTTTACTTATTTTCAATTTTTTtAAAATATGCCCTTTTCTTTTTATTTATCTTTTAAAAAGAATTGAAATGGTTGATCCAATTTCTATGCTTATTCAGAATACAAGCCATCATCCAATGAAATTTACGAGATGCAGTGAGTGTGGATGAAATTCGATGTCGGCTTTACTTGATAGTTATCGGATTTGAAGAGAACATCTGTTGGTAGTTGATGCAGCCGTTATATTTTAAAACAAATCTACCAAGTCCTTAGTTGTTTTGAGGACTGAATCTGGCAAGCATCTAGCAAATCTATGGGATTTTTAGCAAGCATCTTATAGTACTTTCAATCTTCTGAACACAAAAAaaTAAAAATGCATGTCTTTAGTAGTTTTGTTAATATCCAATTTtGGAATTTAAATCATACATTGATTTTCTGTTTTGGTATACAACCAATACAGTTTACAATTGAGAATGGAACTTTCAGAAAATCTATTTTTGGGCTCTTCTAGAACAGAATTATAATTCTTGTACGGGTCTACCACAGTGAGATATATGTTTCTTGTTCTGCATTTTATGCGAATCTATGTAATTTAGTAATAAAGTTGGTGCTGAAATATAAGTCCGCTTAAGTGACTAATTTTTTtCTTCTTTTATTATTCTAATAACTTGAAAGTTGCTATTTCTATTCAGAACCCACATTGTGAAACTGTTTTACTCATTAGCAGTATATGTAGTTTCATTTCCCTGTTGGTTTTATTTTCATTTAAAATTCTAAGATTGTGGCTTTCTTGACATTTGACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGGTGAGTGACTTAAATTTTTCCATTTCCTTCATGCACATTTCCAAGACCCAAACGCCTAACACTTTTATCCTGACCCGAAAATACTTTCCACTGAAAACCATCATAGTTGAAACAAAGAGCAATTTATTTTTGGATTTGAAAAGAGTTAAAAAGCACTCAAACTGCTTTGTAAGAAAATATTTGTAGTGCTTTTAGCCTTTTATACTTTTAGAAGTGTGGAACCAAACATTAAGATTAGATGATTTAATTTGTTATTGAGCAACCTTTTAAATTCCTTATTTGTATTGCTTTCTAGAATATAGTGTGCACATAATGACTGGAATTTTCTCTATTCTATGCGTTGTGCTTACACTTTTCTGAGTTGTTAACGCATAAAATTTGTTATTTTCACAGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCCGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGTATATACCCTATCGTGCAGTTTGCTTGATGTGATATAATGTTTTCTTTTTtGGCTAGCATAATTAAGTATCTTAATACCAGAAATATTGAAACAGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCACGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGATGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCGACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAAATTTACTTGAAGCAATGACACGTTCCACGGGCTCACGAATACGGATTATCTTATGCAAAGTTTTGTAACGGTATCCGATTTCTCCCTCTGCCAAAGAAGGGAAAAAAaCAAAAAAaGATCTTGTTTAGTTTATCGCTAGGATTTGTGGTGAATGTTGTTTTCTTGTAGAGTGTAATGAATGGTGATATGGTTTTAGATTGTGATGTTTGATAAGT CTCAACCTCCTTCATCCAAAACTAACTAATTTACTCTCTAACAAGAACCCACTACTAACCTCCCCATCTTTGTCCGCCACCGCCACCACCAAATGCGGTGGCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCCGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCACGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGATGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCGACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAAATTTACTTGAAGCAATGACACGTTCCACGGGCTCACGAATACGGATTATCTTATGCAAAGTTTTGTAACGGTATCCGATTTCTCCCTCTGCCAAAGAAGGGAAAAAAACAAAAAAAGATCTTGTTTAGTTTATCGCTAGGATTTGTGGTGAATGTTGTTTTCTTGTAGAGTGTAATGAATGGTGATATGGTTTTAGATTGTGATGTTTGATAAGT ATGCGGTGGCCGGCCTTCAAGATCGGCGGCCTTGGCCTCATCGCCATATCATATGTCTCCATCGACTACCTCTCCCACCTCTCGCCCACATGGCATTCCCGTCTCCAGCCAGCTCTCTGGTCTCTTCTTGCCCTTGCCGCCATCTTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCGCCTCCATGCTCTTTATGCTCACCGCTCTTCTCTTCGAAGCCCTCTCCGTTCGATTCGTCACCGCTGTCCTTGGTCTCGACTGGCACAGTGACGCAGCTCCTCTTCCTGATACTGGCCAATGGCTACTCTTGGCATTGAACGAGAAACTTCCTCCAGCTGTCGTGGAGATATTGAGAGCTCGGATTATTGGATTGCACCATTTTCTAATGTTGTTCATTATGTTGGCGTTCTCTGTGCTTTTTGACTCAGTTAAAGCTCCTGGACTTGGACTTGGTGCAAGGTATATGTTCACCATGGCAATCGGTCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTACCATCTGCAAGGCCATGGTGTGCTTATTCTCGATTCAGAGTCCCTCCATACCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTATTAAATCAGGACATAGCATTTGCTGATCCCGGACAGATTCTTGGTGACTACAGACCTGATTGGGGTAAAATGAGCTTCTTATTAGATTTCCTTCGACCGACACCCTCCGAAGGATCTTCTTGGTACAATTTGCTTAAGAAGGCTGGAGGTGGCTGCAACGACCTTGTATACAGTGGCCACATGCTCGTTGCTGTCCTCACTGCCATGGCATGGACGGAGGCTTATGGAGGTCTTAGCTCAGCTGTTGTATGGTTTTTCGTAATACACAGTGCTCAGCGTGAAATACGAGAACGCCATCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGGATTCTCTTGTGGAAAATGACTGGCTTCATTTGGTCAGCTAAAGATGTCACGAGACGTCGAAAGCTAGTGAAGTTGGAGAAGATTCAAAATAAACTAGTACAAGCTGCAAAAGATGCAGATATTGATGAGGTGAGAGAACTTCTAAAGGAAATAGAGGTAACTAGTCAGGAGAGTGACAATGAAAGAAATCGAGGCCAGAGCGGAGTGTTGTGGTTCTTCGCTTGTGCGACAGTATTTGCTGCACTTGTTATTGTTCTTCTAGCCTTCACATGGACAAGTGATGGATAA MRWPAFKIGGLGLIAISYVSIDYLSHLSPTWHSRLQPALWSLLALAAIFRVPFYKHWSSEFRSAIPFLASMLFMLTALLFEALSVRFVTAVLGLDWHSDAAPLPDTGQWLLLALNEKLPPAVVEILRARIIGLHHFLMLFIMLAFSVLFDSVKAPGLGLGARYMFTMAIGRLLRAITFVSTILPSARPWCAYSRFRVPPYPHRWAQKYYVPYAEDADTIRQLLNQDIAFADPGQILGDYRPDWGKMSFLLDFLRPTPSEGSSWYNLLKKAGGGCNDLVYSGHMLVAVLTAMAWTEAYGGLSSAVVWFFVIHSAQREIRERHHYSVDCVVAIYVGILLWKMTGFIWSAKDVTRRRKLVKLEKIQNKLVQAAKDADIDEVRELLKEIEVTSQESDNERNRGQSGVLWFFACATVFAALVIVLLAFTWTSDG*
BLAST of Cucsa.365950.1 vs. TrEMBL
Match: A0A0A0K7Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016930 PE=4 SV=1) HSP 1 Score: 867.5 bits (2240), Expect = 7.0e-249 Identity = 427/429 (99.53%), Postives = 427/429 (99.53%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. TrEMBL
Match: B9H7T1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s21540g PE=4 SV=2) HSP 1 Score: 723.0 bits (1865), Expect = 2.1e-205 Identity = 346/430 (80.47%), Postives = 387/430 (90.00%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. TrEMBL
Match: A0A061FIN1_THECC (Sphingomyelin synthetase family protein isoform 1 OS=Theobroma cacao GN=TCM_035631 PE=4 SV=1) HSP 1 Score: 707.2 bits (1824), Expect = 1.2e-200 Identity = 338/429 (78.79%), Postives = 382/429 (89.04%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. TrEMBL
Match: A0A059BYV2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04230 PE=4 SV=1) HSP 1 Score: 699.1 bits (1803), Expect = 3.3e-198 Identity = 334/430 (77.67%), Postives = 380/430 (88.37%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. TrEMBL
Match: W9SAN4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017853 PE=4 SV=1) HSP 1 Score: 693.7 bits (1789), Expect = 1.4e-196 Identity = 327/421 (77.67%), Postives = 375/421 (89.07%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. TAIR10
Match: AT1G43580.1 (AT1G43580.1 Sphingomyelin synthetase family protein) HSP 1 Score: 618.6 bits (1594), Expect = 2.9e-177 Identity = 304/422 (72.04%), Postives = 347/422 (82.23%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. NCBI nr
Match: gi|449441209|ref|XP_004138375.1| (PREDICTED: uncharacterized protein LOC101212215 isoform X1 [Cucumis sativus]) HSP 1 Score: 867.5 bits (2240), Expect = 1.0e-248 Identity = 427/429 (99.53%), Postives = 427/429 (99.53%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. NCBI nr
Match: gi|659126226|ref|XP_008463076.1| (PREDICTED: uncharacterized protein LOC103501312 [Cucumis melo]) HSP 1 Score: 853.6 bits (2204), Expect = 1.5e-244 Identity = 420/429 (97.90%), Postives = 423/429 (98.60%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. NCBI nr
Match: gi|566172539|ref|XP_002306701.2| (hypothetical protein POPTR_0005s21540g [Populus trichocarpa]) HSP 1 Score: 723.0 bits (1865), Expect = 3.1e-205 Identity = 346/430 (80.47%), Postives = 387/430 (90.00%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. NCBI nr
Match: gi|590600742|ref|XP_007019527.1| (Sphingomyelin synthetase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 707.2 bits (1824), Expect = 1.7e-200 Identity = 338/429 (78.79%), Postives = 382/429 (89.04%), Query Frame = 1
BLAST of Cucsa.365950.1 vs. NCBI nr
Match: gi|702382414|ref|XP_010063857.1| (PREDICTED: uncharacterized protein LOC104450853 [Eucalyptus grandis]) HSP 1 Score: 699.1 bits (1803), Expect = 4.7e-198 Identity = 334/430 (77.67%), Postives = 380/430 (88.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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