Cucsa.365830.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.365830.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Farnesyl diphosphate synthase
Location	scaffold03611 : 3715555 .. 3719516 (+)
Sequence length	1632

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCGTGCAGTTTCACAAACTCTCCATCATCATCGTTCAAACTTAAAGCCTGGATCCATCATCAGATCATCAACTCTATCAAAAATCGCCACGCGTTCTCATAACTGAGATTAAGATCCACTGGATTTCTTACTACACTATTTATTATTCTAAAATACCTCTCATTCCCTTCGTCAAAGCCGAGAGGAATAGAAAGAACCTCGCCTTCTCTCACTTAGTCCTACCAATTTGCAATTTCAACTGGCATATGAGAAGTTGCATTCCCAACATTTTCCATCCTTGAAATTCAATTTTCAAGCTACATCGATCCTTCATTCTTCTAGGTTTTCTTTTTCATTTCTCTATCTTGCTCTCTCTCTGTGTCTTCTTCATTTCTCTCTCTTCTATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAATCTGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGGTCGAACGGGTAACGTCTTTGATTCTTTTCCATTTCTCCTTCTGTTCTTCTGGGTTCTATGTGCTTCCTGTCTCCATTTTGTTTCTTCCTTTCCAATGCCAAACTCTAGAGGGATAATATTCTGCTTCTTCACTTTCTTCAGTTAATACGAGTAACtACTTttTTTTTTTTTttttAATTCCACCAATTTACTTCTTAACTTCGCTCTTTACTTGATTACGATTAGCATACTCATCTGAAAAGGCGAGTGCTCTCCATTACCGTGTGCCATTTTGAAATTGTTGGCCTAATTTTGTAATTGTGAGCTGTTTTATGAACTGCTAAAGGAACTAATGGAACGTGTTTCAGTCATGGTAGTCGTAGATTTGATTGTACGGTTAAGAAACCGAGAAATGAGGTCCTTAGATCTATATATTGTTTACATCGGTTAGCAATATAAGATTTACATGGTTTGAATGATGCGTTTCACTAGTCAAATTAATCGGGTCCACACTTGAGTGGGCTTAAACATACGACACTTGATATACTATTCAGTCCAATCAGTTTCTGTCTTAATAGGCTTTTGGTCATCCATCGACATAGTTTCTAGTTAACTGTTGATTCTAGTTTATATTCCCATTTGTTTGCTGTTATCACGGTCCTTTACAGTTGATTCTAGTTTATATTCCCATTTGTTTATTGTTATCTCGGTCCTTTACAGATGCTGGACTACAATGTGCCTGGAGGTGGGAAATAATCATGCGAAAGATTCTGTTCATTGATCATATTATTGGACATGTCGGACTATTCATGGACATTTTTTATGAGGAAGTAAGCTAACTTCTAATGTGAAATCATTTTTCCTGCAGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGGTAAGATATAACTATATGATTCATTCTGTTGTCCTGCTTGGAGGATTGATAAACAAGATGATATCCACATCCTCATGAATTTTCTCAAATCTCTGCAGCTCCAGGCTTATTTTCTTGTCCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTTTCTAGGAAACAATGTATAGCATTCTTCAATCTGTAACTGTTAGTGCACTAACAGCTGAACAGTTCTAAGTTTTCTTGGTAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTATTTAACGAGGTAGTTTCTTGGCAATGACTAACATGGGTTTATTCCAATCTTGATCTAATAACATGCTAACATTCACGTTTTTATGTTCAAATAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTGTGAGTTTCAACTTTCAAAACCTTTTTCTGGTTTCTTTAATTGGGGCAATAAAGTCAAAACGGTATATGCCATACTATATGTGTGAAAGAACAAGTAAACCAGGAACATTTCAATCGTTTTCACTTTCGTATATTATTTTGGGGTGCTTTCTAATGCACATATAATGTAACTTTTGTAGTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTGAGTAGCTTTTCCTTGCTCCACTTTAAGAAAGCAGTGTGTGTGAAGTGGTTGAAGAATTAGTAGCTTCTTTGGTGGCTTTGCATTATCCATTTTTATAAAATACATAGTGTGAAGTTTTATTCTGCAGATCATTTCTCTAATAAAATACTCAGTATTGTTTGTGATAGATTTGATTGACCGTGAGCTGTTTTTGTCATGATTGCAGGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGTATATTACCTTCACTTGAATGGTTGATTAATGATTCTGATTTTCTCTAGATTTCTTAGGGTTGAGGTCGCATTCACATTATCTGAACTACACTTAGTTTTTTtAAGAAATGTTTGTTTAAGCCGATGTTTGATTCAAAAACATTCTCTTAATCTTCTTTAACCACATCTTCAAACATAAATGCTTATCTGCTTTTAATCCGAGGATTTTAGCTTTTGTCTTCAAGAGGTGCAAGAATAAACTTCGCTCCATTTTCTCGAAGTTTTTTTtAATTCTTTTCTCAAGTAGAAAATTTTTCTTTTTGTGTGTGTTCTTTTAATCTCTTGTCATGTGACTTTGTGATAATGTGAACAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGAGTCATGCCCTGTTCTTGTTGAACTTTTCACTCCTTGCACGGTTCTGACAAATCTTTTATTCATGAAGTTCTTGAATCAACTGTTGTCAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGTAATTGTCACGTTTTAAATTCCTTGATTGTTTTCTCATCTGTCTTGCAAGAAGTTGCTTCATTTTTTtGTTTTACCAGGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGTCTGACCTTACATCATAAAAACTAAAACCTTACTCATTTTACAACAAGGAAAAATATGACGTTTTAAATTCCTTGTTTGTTTTCTATGCACATTAATCTTACCAGTTTCTTTGCAAAATTTTAGAAGAATCAGAGAAGGAAGTTAAAACACTTTTAATTTTTtATATTTAAGTACTTTTTTGCATACTTGCTGTGAATTACTCAAAAATTCAGCATCTAAATTATTGATGGAACCAAAAAACCAGGGTCGCAACTCCACAACTTCAGTCCTTTCTCTTTCAGTTACTTATTATAGTTTCCTTTGGGTAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGAGCTACTCGTAGACTTCTGCTCCCTTGGATTTGGCTTCATCATGCTCTTATTTCTTAGTAAGCTTGGAACGTATACAGATCCTTCTTACTAGCTTCTGATTTACATGTTTTTGGTCTCGAAATAAGGTTCCACGACCTCTATTCATAACCTTGGTATTGGAATACTGTCTCGTTTCTGTTTTAAAATGTTGTTAGATTTACAATTTGATTTCTTGAATAAATATAGAACGATTCTCATTTCTT

mRNA sequence

AATGCGTGCAGTTTCACAAACTCTCCATCATCATCGTTCAAACTTAAAGCCTGGATCCATCATCAGATCATCAACTCTATCAAAAATCGCCACGCGTTCTCATAACTGAGATTAAGATCCACTGGATTTCTTACTACACTATTTATTATTCTAAAATACCTCTCATTCCCTTCGTCAAAGCCGAGAGGAATAGAAAGAACCTCGCCTTCTCTCACTTAGTCCTACCAATTTGCAATTTCAACTGGCATATGAGAAGTTGCATTCCCAACATTTTCCATCCTTGAAATTCAATTTTCAAGCTACATCGATCCTTCATTCTTCTAGGTTTTCTTTTTCATTTCTCTATCTTGCTCTCTCTCTGTGTCTTCTTCATTTCTCTCTCTTCTATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAATCTGAGCTTCTTCAGGACCCTGCGTTTGAGTTTACGGATGCTTCTCGCCAATGGGTCGAACGGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCTTATTTTCTTGTCCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTATTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGAGCTACTCGTAGACTTCTGCTCCCTTGGATTTGGCTTCATCATGCTCTTATTTCTTAGTAAGCTTGGAACGTATACAGATCCTTCTTACTAGCTTCTGATTTACATGTTTTTGGTCTCGAAATAAGGTTCCACGACCTCTATTCATAACCTTGGTATTGGAATACTGTCTCGTTTCTGTTTTAAAATGTTGTTAGATTTACAATTTGATTTCTTGAATAAATATAGAACGATTCTCATTTCTT

Coding sequence (CDS)

ATGGGTCGAACGGGTAAGCTTAACCGAGGGCTCTCGGTTATTGATAGCTATAGATTATTGAAAGAAGGGAAGGAGCTGACTGAAGACGAAATCTTTCTTGCTAGTGTTCTTGGTTGGTGTATTGAATGGCTCCAGGCTTATTTTCTTGTCCTCGATGATATTATGGATAACTCTGTCACACGACGTGGTCAACCTTGCTGGTTTAGAGTACCCAAGGTTGGGATGATTGCAGTAAACGATGGAGTTCTTCTTAGAAATCATATTCCTAGAATGCTCAAAAATCACTTCAAAGGGAAGCCATATTACGTTGATCTGCTTGATTTATTTAACGAGGTTGAGTTTCAAACAGCATCAGGACAAATGATTGATTTGATAACCACCATCGAAGGAGAAAAAGATCTTTCCAAATATGCACTATCACTTCATCGGCGCATTGTACAGTACAAGACTGCCTATTATTCATTTTACCTTCCAGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGATGATTATCTAGATTGTTTTGGCGATCCTGAAACCATAGGAAAGGTGGGAACAGACATTGAAGATTTTAAATGCTCTTGGTTGGTTGTGAAAGCTCTGGAGCTATGCAACGACAATCAAAAGAAGTTATTACATGAGGCTTATGGGAAACCAGACCCAGAAAATGTGGCCAAAGTAAAGGCCATCTACAAGGATCTCGATCTTCAGGGTGTATTTGCAGAGTATGAGAGTCAGAGCTATGCTAAACTGAATGCCTCCATTGAAGCTCAACCCAGCAAAGCAATTCAAGCGGTTCTCAAGTCTTTCTTGGGTAAAATATACAAGCGCCAGAAGTGA

Protein sequence

MGRTGKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMGVYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK*

Homology

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BLAST of Cucsa.365830.2 vs. Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.3e-149
Identity = 255/297 (85.86%), Postives = 274/297 (92.26%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLK+G EL +DEIFLAS LGWCIEWLQAYFLVLDDIMDNS TRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKDGHELNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIA NDGVLLRNHIPR+LK HF+GKPYY DLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDLSKY LSLHRRIVQYKTAYYSFYLPVACAL+M GE+L+NHI VK+ILV MG
Sbjct: 166 ITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
            YFQVQDDYLDCFG PETIGK+GTDIEDFKCSWLVVKALEL ND QKK+L++ YGKPDP 
Sbjct: 226 TYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPA 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+Y +L+LQGVF EYES+SY KL  SIEA PSKA+QA+LKSFLGKIYKRQK
Sbjct: 286 NVAKVKALYDELNLQGVFTEYESKSYEKLVTSIEAHPSKAVQALLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. Swiss-Prot
Match: FPPS2_LUPAL (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 3.1e-143
Identity = 243/297 (81.82%), Postives = 269/297 (90.57%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSY+LLK+G+EL ++EIFLAS LGWCIEWLQAYFLVLDDIMDNS TRRG 
Sbjct: 46  GKLNRGLSVIDSYKLLKDGQELNDEEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGH 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIA NDGV+LRNHIPR+LK HF+GKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDLSKY LSLHRRIVQYKTAYYSFYLPVACAL+M GE+L+NH  VK+ILV+MG
Sbjct: 166 ITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNILVEMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
            YFQVQDDYLDCFG PETIGK+GTDIEDFKCSWLVVKALEL N+ QKK+L+E YGKPDP 
Sbjct: 226 TYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPA 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVK +Y +L+L+G +A+YES+SY KL   IE  PSKA+Q VLKSF  KIYKRQK
Sbjct: 286 NVAKVKTLYNELNLEGAYADYESKSYEKLVTCIEGHPSKAVQGVLKSFWAKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2)

HSP 1 Score: 508.1 bits (1307), Expect = 6.8e-143
Identity = 238/299 (79.60%), Postives = 271/299 (90.64%), Query Frame = 1


Query: 3   RTGKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRR 62
           R GKLNRGLSV+DS++LLK+G +LTE E+FL+  LGWCIEWLQAYFLVLDDIMDNSVTRR
Sbjct: 86  RGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRR 145

Query: 63  GQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMI 122
           GQPCWFRVP+VGM+A+NDG+LLRNHI R+LK HF+ KPYYVDL+DLFNEVE QTA GQMI
Sbjct: 146 GQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMI 205

Query: 123 DLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQ 182
           DLITT EGEKDL+KY+LS+HRRIVQYKTAYYSFYLPVACAL+MAGE+LENHI VK++LV 
Sbjct: 206 DLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVD 265

Query: 183 MGVYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPD 242
           MG+YFQVQDDYLDCF DPET+GK+GTDIEDFKCSWLVVKALE C++ Q K+L+E YGKPD
Sbjct: 266 MGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPD 325

Query: 243 PENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           P NVAKVK +YK+LDL+GVF EYES+SY KL  +IE   SKAIQAVLKSFL KIYKRQK
Sbjct: 326 PSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384

[Close]

BLAST of Cucsa.365830.2 vs. Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 3.2e-140
Identity = 239/297 (80.47%), Postives = 266/297 (89.56%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSY+LLK GK LT+DEIF AS LGWC+EWLQAYFLVLDDIMD S TRRGQ
Sbjct: 47  GKLNRGLSVIDSYQLLKGGK-LTDDEIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQ 106

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFR+PKVGMIA NDG++LRNH+PR+LK HF+GKPYYVDL+DLFNEVEFQTASGQMIDL
Sbjct: 107 PCWFRLPKVGMIAANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDL 166

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+ GEKDLSKY+LS+HRRIVQYKTAYYSFYLPVACAL+M GEDLE H+ VK++LV+MG
Sbjct: 167 ITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMG 226

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
            YFQVQDDYLDCFG PE IGK+GTDIEDFKCSWLVVKALEL N+ QKK+LHE YGK DP 
Sbjct: 227 TYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELANEEQKKVLHENYGKKDPS 286

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
            VAKVK +Y  L+LQGVF +YE+ SY KL  SIE  PSKA+QAVLKSFLGKIY+RQK
Sbjct: 287 PVAKVKELYNTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYRRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. Swiss-Prot
Match: FPPS1_PARAR (Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-139
Identity = 240/297 (80.81%), Postives = 267/297 (89.90%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSY+LLK G ELT++EIFLA+ LGWCIEWLQAYFLVLDDIMD S TRRGQ
Sbjct: 47  GKLNRGLSVIDSYQLLKGG-ELTDNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQ 106

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFR+PKVGMIA NDG++LRN++PR+LK HF+GKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 107 PCWFRLPKVGMIAANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDL 166

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+ GEKDLSKY+LS+HRRIVQYKTAYYSFYLPVACAL+M GEDLE H  VK++LV+MG
Sbjct: 167 ITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMG 226

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
            YFQVQDDYLDCFG PE IGK+GTDIEDFKCSWLVVKALEL N+ QKK+LHE YGK DP 
Sbjct: 227 TYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELSNEEQKKILHENYGKKDPS 286

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           +VAKVK +Y  L+LQGVF +YE+ SY KL  SIE  PSKA+QAVLKSFLGKIYKRQK
Sbjct: 287 SVAKVKELYHTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. TrEMBL
Match: K7NBV9_SIRGR (Farnesyl diphosphate synthase OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 9.5e-160
Identity = 278/297 (93.60%), Postives = 288/297 (96.97%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPR+LKNHFKGK YYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRILKNHFKGKSYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALS+HRRIVQYKTAYYSFYLPVACALV++GEDL+ H  VKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSIHRRIVQYKTAYYSFYLPVACALVISGEDLDKHTVVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCN+ Q KLLHEAYGKPDPE
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEEQNKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+YK+LD QGVFA+YESQSYAKLNASIEA PSK+IQAV KSFLGKIYKRQK
Sbjct: 286 NVAKVKALYKELDFQGVFAKYESQSYAKLNASIEAHPSKSIQAVFKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. TrEMBL
Match: A0A076JDS1_GYNPE (Farnesyl diphosphate synthase OS=Gynostemma pentaphyllum PE=2 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.1e-155
Identity = 272/297 (91.58%), Postives = 283/297 (95.29%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTE+EIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTENEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVG+IA NDG+LLRNHIPR+LKNHF+ KPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGLIAANDGILLRNHIPRILKNHFREKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDLSKY LSLHRRIVQYKTAYYSFYLPVACALVMAGE+LE H  VKD LVQMG
Sbjct: 166 ITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALVMAGENLEKHTVVKDNLVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCN+ QKK LHE YGK DP 
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEEQKKFLHENYGKEDPA 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+YK+LDLQ VFAEYESQSYAKLNASIEA PSK+IQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKALYKELDLQSVFAEYESQSYAKLNASIEAHPSKSIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. TrEMBL
Match: A0A0A0K801_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 2.4e-155
Identity = 281/297 (94.61%), Postives = 281/297 (94.61%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQ               VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE
Sbjct: 226 VYFQVQ---------------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 327

[Close]

BLAST of Cucsa.365830.2 vs. TrEMBL
Match: D7NM49_GLYUR (Farnesyl-diphosphate synthase OS=Glycyrrhiza uralensis PE=2 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 8.3e-148
Identity = 255/297 (85.86%), Postives = 276/297 (92.93%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEG+ L +DE+FLAS LGWCIEWLQAYFLVLDDIMDNS TRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGQALNDDELFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIA NDGVLLRNHIPR+L+ HF+GKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAANDGVLLRNHIPRILRKHFRGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDLSKY LSLHRRIVQYKTAYYSFYLPVACAL+M GE+L+NHI VK+ILV MG
Sbjct: 166 ITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMMGENLDNHIDVKNILVDMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
            YFQVQDDYLDCFGDP+TIGK+GTDIEDFKCSWLVVKALELCN+ QKK+L+E YGKPDP 
Sbjct: 226 TYFQVQDDYLDCFGDPQTIGKIGTDIEDFKCSWLVVKALELCNEEQKKVLYEHYGKPDPT 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+Y +L+LQGVFAEYES SY KL  SIEA PSKA+Q+VLKSFL KIYKRQK
Sbjct: 286 NVAKVKALYNELNLQGVFAEYESASYEKLVTSIEAHPSKAVQSVLKSFLAKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. TrEMBL
Match: C0LSI7_9ROSI (Farnesyl diphosphate synthase OS=Euphorbia pekinensis GN=fps PE=2 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 8.3e-148
Identity = 249/297 (83.84%), Postives = 280/297 (94.28%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSY+LLK+G+ELTE+EIFLAS LGWCIEWLQAYFLVLDDIMD S TRRGQ
Sbjct: 46  GKLNRGLSVIDSYKLLKQGEELTEEEIFLASALGWCIEWLQAYFLVLDDIMDGSHTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFR+PKVGMIA NDG++LRNHIPR+LK HF+GKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRLPKVGMIAANDGIMLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDL+KY LSLHRRIVQYKTAYYSFYLPVACAL+MAGE L+NHI V++ILVQMG
Sbjct: 166 ITTLEGEKDLNKYTLSLHRRIVQYKTAYYSFYLPVACALLMAGESLDNHIDVQNILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           +YFQVQDDYLDC+GDP+TIGK+GTDIEDFKCSW+VVKALE+CN+ QKK+LHE YGKPDPE
Sbjct: 226 IYFQVQDDYLDCYGDPKTIGKIGTDIEDFKCSWMVVKALEVCNEEQKKVLHELYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           +VAKVK +Y +L+LQG+F EYE+QSY KL  SIEA PSKA+Q+VLKSFLGKIYKRQK
Sbjct: 286 SVAKVKVLYNELNLQGIFMEYENQSYEKLITSIEAHPSKAVQSVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. TAIR10
Match: AT5G47770.1 (AT5G47770.1 farnesyl diphosphate synthase 1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.8e-144
Identity = 238/299 (79.60%), Postives = 271/299 (90.64%), Query Frame = 1


Query: 3   RTGKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRR 62
           R GKLNRGLSV+DS++LLK+G +LTE E+FL+  LGWCIEWLQAYFLVLDDIMDNSVTRR
Sbjct: 86  RGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRR 145

Query: 63  GQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMI 122
           GQPCWFRVP+VGM+A+NDG+LLRNHI R+LK HF+ KPYYVDL+DLFNEVE QTA GQMI
Sbjct: 146 GQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMI 205

Query: 123 DLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQ 182
           DLITT EGEKDL+KY+LS+HRRIVQYKTAYYSFYLPVACAL+MAGE+LENHI VK++LV 
Sbjct: 206 DLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVD 265

Query: 183 MGVYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPD 242
           MG+YFQVQDDYLDCF DPET+GK+GTDIEDFKCSWLVVKALE C++ Q K+L+E YGKPD
Sbjct: 266 MGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPD 325

Query: 243 PENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           P NVAKVK +YK+LDL+GVF EYES+SY KL  +IE   SKAIQAVLKSFL KIYKRQK
Sbjct: 326 PSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384

[Close]

BLAST of Cucsa.365830.2 vs. TAIR10
Match: AT4G17190.1 (AT4G17190.1 farnesyl diphosphate synthase 2)

HSP 1 Score: 496.9 bits (1278), Expect = 8.8e-141
Identity = 235/299 (78.60%), Postives = 265/299 (88.63%), Query Frame = 1


Query: 3   RTGKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRR 62
           R GKLNRGLSV+DSY+LLK+G++LTE E FL+  LGWCIEWLQAYFLVLDDIMDNSVTRR
Sbjct: 44  RGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRR 103

Query: 63  GQPCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMI 122
           GQPCWFR PKVGMIA+NDG+LLRNHI R+LK HF+  PYYVDL+DLFNEVEFQTA GQMI
Sbjct: 104 GQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMI 163

Query: 123 DLITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQ 182
           DLITT +GEKDLSKY+L +HRRIV+YKTAYYSFYLPVACAL+MAGE+LENH  VK +LV 
Sbjct: 164 DLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVD 223

Query: 183 MGVYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPD 242
           MG+YFQVQDDYLDCF DPET+GK+GTDIEDFKCSWLVVKALE C++ Q K+L+E YGK +
Sbjct: 224 MGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAE 283

Query: 243 PENVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           P NVAKVKA+YK+LDL+G F EYE +SY KL   IEA  SKAIQAVLKSFL KIYKRQK
Sbjct: 284 PSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. NCBI nr
Match: gi|449441191|ref|XP_004138366.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus])

HSP 1 Score: 600.1 bits (1546), Expect = 2.1e-168
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. NCBI nr
Match: gi|659126192|ref|XP_008463060.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo])

HSP 1 Score: 594.0 bits (1530), Expect = 1.5e-166
Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLE H AVKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLEKHTAVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCN++QKKLLHEAYGKPDPE
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEDQKKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. NCBI nr
Match: gi|343466171|gb|AEM42979.1| (farnesyl diphosphate synthase [Siraitia grosvenorii])

HSP 1 Score: 570.9 bits (1470), Expect = 1.4e-159
Identity = 278/297 (93.60%), Postives = 288/297 (96.97%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPR+LKNHFKGK YYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRILKNHFKGKSYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALS+HRRIVQYKTAYYSFYLPVACALV++GEDL+ H  VKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSIHRRIVQYKTAYYSFYLPVACALVISGEDLDKHTVVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCN+ Q KLLHEAYGKPDPE
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEEQNKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+YK+LD QGVFA+YESQSYAKLNASIEA PSK+IQAV KSFLGKIYKRQK
Sbjct: 286 NVAKVKALYKELDFQGVFAKYESQSYAKLNASIEAHPSKSIQAVFKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. NCBI nr
Match: gi|671183990|gb|AII72208.1| (farnesyl diphosphate synthase [Gynostemma pentaphyllum])

HSP 1 Score: 557.4 bits (1435), Expect = 1.6e-155
Identity = 272/297 (91.58%), Postives = 283/297 (95.29%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTE+EIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTENEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVG+IA NDG+LLRNHIPR+LKNHF+ KPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGLIAANDGILLRNHIPRILKNHFREKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITT+EGEKDLSKY LSLHRRIVQYKTAYYSFYLPVACALVMAGE+LE H  VKD LVQMG
Sbjct: 166 ITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALVMAGENLEKHTVVKDNLVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCN+ QKK LHE YGK DP 
Sbjct: 226 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNEEQKKFLHENYGKEDPA 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKA+YK+LDLQ VFAEYESQSYAKLNASIEA PSK+IQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKALYKELDLQSVFAEYESQSYAKLNASIEAHPSKSIQAVLKSFLGKIYKRQK 342

[Close]

BLAST of Cucsa.365830.2 vs. NCBI nr
Match: gi|700190686|gb|KGN45890.1| (hypothetical protein Csa_6G017060 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 3.5e-155
Identity = 281/297 (94.61%), Postives = 281/297 (94.61%), Query Frame = 1


Query: 5   GKLNRGLSVIDSYRLLKEGKELTEDEIFLASVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 64
           GKLNRGLSVIDSYRLLKEGKELTEDEIFL SVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ
Sbjct: 46  GKLNRGLSVIDSYRLLKEGKELTEDEIFLTSVLGWCIEWLQAYFLVLDDIMDNSVTRRGQ 105

Query: 65  PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 124
           PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL
Sbjct: 106 PCWFRVPKVGMIAVNDGVLLRNHIPRMLKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDL 165

Query: 125 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 184
           ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG
Sbjct: 166 ITTIEGEKDLSKYALSLHRRIVQYKTAYYSFYLPVACALVMAGEDLENHIAVKDILVQMG 225

Query: 185 VYFQVQDDYLDCFGDPETIGKVGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 244
           VYFQVQ               VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE
Sbjct: 226 VYFQVQ---------------VGTDIEDFKCSWLVVKALELCNDNQKKLLHEAYGKPDPE 285

Query: 245 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 302
           NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK
Sbjct: 286 NVAKVKAIYKDLDLQGVFAEYESQSYAKLNASIEAQPSKAIQAVLKSFLGKIYKRQK 327

The following BLAST results are available for this feature:

BLAST of Cucsa.365830.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FPPS1_LUPAL	6.3e-149	85.86	Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1	[more]
FPPS2_LUPAL	3.1e-143	81.82	Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2 SV=1	[more]
FPPS1_ARATH	6.8e-143	79.60	Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1...	[more]
FPPS2_PARAR	3.2e-140	80.47	Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1	[more]
FPPS1_PARAR	1.2e-139	80.81	Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1 PE=2 SV=1	[more]

BLAST of Cucsa.365830.2 vs. TrEMBL


Match Name	E-value	Identity	Description
K7NBV9_SIRGR	9.5e-160	93.60	Farnesyl diphosphate synthase OS=Siraitia grosvenorii PE=2 SV=1	[more]
A0A076JDS1_GYNPE	1.1e-155	91.58	Farnesyl diphosphate synthase OS=Gynostemma pentaphyllum PE=2 SV=1	[more]
A0A0A0K801_CUCSA	2.4e-155	94.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1	[more]
D7NM49_GLYUR	8.3e-148	85.86	Farnesyl-diphosphate synthase OS=Glycyrrhiza uralensis PE=2 SV=1	[more]
C0LSI7_9ROSI	8.3e-148	83.84	Farnesyl diphosphate synthase OS=Euphorbia pekinensis GN=fps PE=2 SV=1	[more]

BLAST of Cucsa.365830.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47770.1	3.8e-144	79.60	farnesyl diphosphate synthase 1	[more]
AT4G17190.1	8.8e-141	78.60	farnesyl diphosphate synthase 2	[more]

BLAST of Cucsa.365830.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441191\|ref\|XP_004138366.1\|	2.1e-168	99.66	PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus]	[more]
gi\|659126192\|ref\|XP_008463060.1\|	1.5e-166	98.65	PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]	[more]
gi\|343466171\|gb\|AEM42979.1\|	1.4e-159	93.60	farnesyl diphosphate synthase [Siraitia grosvenorii]	[more]
gi\|671183990\|gb\|AII72208.1\|	1.6e-155	91.58	farnesyl diphosphate synthase [Gynostemma pentaphyllum]	[more]
gi\|700190686\|gb\|KGN45890.1\|	3.5e-155	94.61	hypothetical protein Csa_6G017060 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000092	Polyprenyl_synt
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0006695	cholesterol biosynthetic process
biological_process	GO:0045337	farnesyl diphosphate biosynthetic process
biological_process	GO:0033384	geranyl diphosphate biosynthetic process
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004161	dimethylallyltranstransferase activity
molecular_function	GO:0004337	geranyltranstransferase activity
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.365830	Cucsa.365830	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.365830.2	Cucsa.365830.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.365830.2.five_prime_UTR.1	Cucsa.365830.2.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.365830.2.CDS.1	Cucsa.365830.2.CDS.1	CDS
Cucsa.365830.2.CDS.2	Cucsa.365830.2.CDS.2	CDS
Cucsa.365830.2.CDS.3	Cucsa.365830.2.CDS.3	CDS
Cucsa.365830.2.CDS.4	Cucsa.365830.2.CDS.4	CDS
Cucsa.365830.2.CDS.5	Cucsa.365830.2.CDS.5	CDS
Cucsa.365830.2.CDS.6	Cucsa.365830.2.CDS.6	CDS
Cucsa.365830.2.CDS.7	Cucsa.365830.2.CDS.7	CDS
Cucsa.365830.2.CDS.8	Cucsa.365830.2.CDS.8	CDS
Cucsa.365830.2.CDS.9	Cucsa.365830.2.CDS.9	CDS
Cucsa.365830.2.CDS.10	Cucsa.365830.2.CDS.10	CDS
Cucsa.365830.2.CDS.11	Cucsa.365830.2.CDS.11	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.365830.2.three_prime_UTR.1	Cucsa.365830.2.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 4..255 score: 1.3
IPR000092	Polyprenyl synthetase	PROSITE	PS00444	POLYPRENYL_SYNTHASE_2	coord: 183..195 scor
IPR000092	Polyprenyl synthetase	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 49..63 scor
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 3..301 score: 3.8E
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 4..300 score: 6.12
None	No IPR available	PANTHER	PTHR11525	FARNESYL-PYROPHOSPHATE SYNTHETASE	coord: 5..301 score: 4.9E