Cucsa.358970.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTCTACGAAAGAAAGTTTTCTCATCAGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGAAAGGAATTCTTCCCGGAAACCTGAGTTTTCCCGCCGGTTGCTTTTATTTCTCTCTTCTCGATCTCAAGATTGACGCTTTTATTTGTTTCAGTCTTGATTTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGTGTTCGTTGTGTTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTGTTTCTCTTTTATTTGAATGTTTCTGTAGTTATATATTTTTCTGATTTTAGTTTGGGTGGATATTGGATTCGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGGGCATCTCTTGAATTTCGTTGTCAATTTGAGGGTTTGTAATTCGTATTTCAATTATTCTGGAAGGAGTTGGGTTCTGTTGAGTTTAGGTTTGGGTATAGTAATTGAGAAGCGAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGGTAAGAATTTTGTTTTAGGTTTTAGCCCCCCTCCCCCCCCCCCCCCGTATTTGGGATTATATTTGCAATGCATGGTTAGTAATAATTGACAAATCTCACCTATGTTTGTCTGCCCTGTTTTTATATATTAAAAGTTAGAACTACTTTAGCCGCATGTTAATACACGACACTTGGTTTAGACAAGTTATATTTGATCCGGCCTTTGTTACATTATGTGGAATGATTTAGATTAAACGCCCTCGATGATATTGTTTTGATGTCATATTAATGTTTGTGTTTTTATATGTAACTAGGCCATTTTTTTTGTAAAATATAATTGCACCTAACTCTTTGGTGTCTGGAGTTTATTTCTTAATGGTTCATAGTATCCTGTATGTTGTTCCTTCAGGAAGTGATGTGAATTTCAATTAAGGTCCGTGTTCATGTACTAGCTGGTTAGCTACTTTTTTTGAGAACCTTTTTTTCCCTTGACTTCCTATCTCATGAATCCCTTTTAGTCTGTTTTGAGTTTGAAGAAATATATCCTTTTTGCCTTATTAGATATTACTATCACAGAAATTCACATGTTTAATATTTTGGTGATTGGGTTTGTTAGGTCTACTAATTCAAATTGCCAATGATAAAAACATAAATGTTTAAACTCTACGGAATAAGAAAGCAAGTTATTTAGAATATGCCGCTAATGGTTGGTTGTCATGCTTTCTATTTCAATATTTTGACTGATCCTGGCAGTTTTCCTCCCTTGAATTTTTTGTTTAGAATGCATGGGCGATGGATTGGGGACTGGGGTGGTTGAAGTATTGCAAAATAGTTTTGGAGTAAAACGGACAGTAGACATTGTTTCTGTTAAATGTTATCCTGGGAGTTACTTTCTAGCGTTGTACCCTCTTTTCTTATGTTTAATACACTTGCTGGCAACTAGTTTCAAAGTAATCAATTCTGAATCAATTTTTTTTTCTCGTATTGTGTAATATGTTTTATATAAAACTAGTGTCAGCTTCTCTTACCATTTCGTTTTTCTTGTCATACAGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGGCTTCTTTGCTCAAGGAAATCAACAGATAACCTTCTTTGACATTCAAATTGTTTAAAATTCACTATTCACAATACTACTGCTAACTAACATGGTTGACTGGAAAACAAAACATGCCAGGACAAATTTTTTAATTCATGTTAGTCTATTATTTTACTTCATTCCATGCTCGACTTTGCTGTTGAGTTGACATGTTCCAATTTGTTTATTTTTGAGAAAAAACTTGTTCTAATGTTTAAGATCATTGAGAAGTAGATGTAGTTGTACCATAATGAAAACATATTTTGGTGCAGATGTCTGAGCTCGAAATTCAAATTGCAAGAACCACCTCTTCATATGGGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATTAGAATCAAGGAAGAGGAACTAGTTTGAGATATGATGATTGACCGTAAATATTGAAAATAACCGGGATCGGTGCGCTGGATTATGATCTAGTGTTTCGAAGCTTTGCACAAGTACAGGAAGTTTTTGTTACTTTTTGGGGAAAGGGTCACTTCCAATGGTGAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTATTTCTTCATACAGATGAATTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGTGTTTCAATGATATAGTGAATAGCTATGAATATAATGAAATTTTAGCATAACTAAAAGGAAATTCTGTTAGTT ATCTCTACGAAAGAAAGTTTTCTCATCAGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGAAAGGAATTCTTCCCGGAAACCTGAGTTTTCCCGCCGGTTGCTTTTATTTCTCTCTTCTCGATCTCAAGATTGACGCTTTTATTTGTTTCAGTCTTGATTTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGTGTTCGTTGTGTTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTGTTTCTCTTTTATTTGAATGTTTCTGTAGTTATATATTTTTCTGATTTTAGTTTGGGTGGATATTGGATTCGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGGGCATCTCTTGAATTTCGTTGTCAATTTGAGGGTTTGTAATTCGTATTTCAATTATTCTGGAAGGAGTTGGGTTCTGTTGAGTTTAGGTTTGGGTATAGTAATTGAGAAGCGAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGAGCTCGAAATTCAAATTGCAAGAACCACCTCTTCATATGGGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATTAGAATCAAGGAAGAGGAACTAGTTTGAGATATGATGATTGACCGTAAATATTGAAAATAACCGGGATCGGTGCGCTGGATTATGATCTAGTGTTTCGAAGCTTTGCACAAGTACAGGAAGTTTTTGTTACTTTTTGGGGAAAGGGTCACTTCCAATGGTGAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTATTTCTTCATACAGATGAATTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGTGTTTCAATGATATAGTGAATAGCTATGAATATAATGAAATTTTAGCATAACTAAAAGGAAATTCTGTTAGTT ATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV*
BLAST of Cucsa.358970.1 vs. Swiss-Prot
Match: SYS1_DICDI (Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.9e-30 Identity = 59/147 (40.14%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. Swiss-Prot
Match: SYS1_NEMVE (Protein SYS1 homolog OS=Nematostella vectensis GN=sys1 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.3e-28 Identity = 56/140 (40.00%), Postives = 94/140 (67.14%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. Swiss-Prot
Match: SYS1_HUMAN (Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27 Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. Swiss-Prot
Match: SYS1_PAPAN (Protein SYS1 homolog OS=Papio anubis GN=SYS1 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27 Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. Swiss-Prot
Match: SYS1_PONAB (Protein SYS1 homolog OS=Pongo abelii GN=SYS1 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27 Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TrEMBL
Match: A0A0A0KC23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446680 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 2.4e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TrEMBL
Match: A0A068TRT1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022044001 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-72 Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TrEMBL
Match: A0A067KY88_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06256 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.7e-72 Identity = 129/152 (84.87%), Postives = 142/152 (93.42%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TrEMBL
Match: A0A061GBF2_THECC (Structural molecules OS=Theobroma cacao GN=TCM_028683 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 3.8e-72 Identity = 128/152 (84.21%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TrEMBL
Match: A0A0D2T4C4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G077000 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 4.9e-72 Identity = 128/152 (84.21%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. TAIR10
Match: AT1G79990.1 (AT1G79990.1 structural molecules) HSP 1 Score: 244.2 bits (622), Expect = 5.2e-65 Identity = 109/151 (72.19%), Postives = 126/151 (83.44%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. NCBI nr
Match: gi|778729275|ref|XP_011659561.1| (PREDICTED: protein SYS1 homolog [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 3.4e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. NCBI nr
Match: gi|659124402|ref|XP_008462142.1| (PREDICTED: protein SYS1 homolog [Cucumis melo]) HSP 1 Score: 307.0 bits (785), Expect = 1.9e-80 Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. NCBI nr
Match: gi|661898101|emb|CDO98068.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72 Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. NCBI nr
Match: gi|802603896|ref|XP_012073327.1| (PREDICTED: protein SYS1 homolog [Jatropha curcas]) HSP 1 Score: 280.0 bits (715), Expect = 2.4e-72 Identity = 129/152 (84.87%), Postives = 142/152 (93.42%), Query Frame = 1
BLAST of Cucsa.358970.1 vs. NCBI nr
Match: gi|590618593|ref|XP_007024091.1| (Structural molecules [Theobroma cacao]) HSP 1 Score: 278.9 bits (712), Expect = 5.4e-72 Identity = 128/152 (84.21%), Postives = 143/152 (94.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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