Cucsa.358690.1 (mRNA) Cucumber (Gy14) v1

NameCucsa.358690.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold03586 : 311778 .. 312497 (-)
Sequence length183
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCTATCATTCGCCCCCTCGCTCTGCCTCATAGCCTCTCCGACGTTCGCCTCCCTCTCAATCTTCACCTCCGCCTCACAGTCTCTCCATCGTTCGCTCCTCTCTTGAACATATCTAAGGTTTGATCTTGAATATTCTTCCTTAGTTTTCATTGAAGTATTTTTTTTGTTTAGTTTTAATGAGGTATTAATTACACCACAAGATGGATTTGAGGGTTTGTTTAGAAGAAATTGAAAAAATGTTTGAGGTGGTTGAGGTGGACCGAAAAAAAATGTTTCAACAATTTTTCAAAAGTGTGCTAGTTTTACTAGACAAAACCTATTAAAACGATGTTTCTCACAATTTTCCATTCAACAAATTTTATTATTGCTGAGTTTAATCCAACAATAATCGACATGATGTCTATCGAACAATAATCGACATGATGTCTATCGATCAAATTTTGATTTTACATTCCTAGAACTGTTGTAATAAGAACTAAATAACGAAAAAATTTACTCGGTTGATATATTCACAAGTAACTTCAACAAAAAAAATTATGGAATAACTTTATTATTTTTGTGAGTATAAATGATAGCGTATAAAACACGATATCTTATAGTACTTAACTCAAGGTCATTCTTTCATTTTACATGTCTATTCCTTGATTTTTATAGGTATCGAGCATAATTCAGGTTATTCCATCCCATAATGTCAATTTCGGGACAAAGCGAGCTTAA

mRNA sequence

ATCTCTATCATTCGCCCCCTCGCTCTGCCTCATAGCCTCTCCGACGTTCGCCTCCCTCTCAATCTTCACCTCCGCCTCACAGTCTCTCCATCGTTCGCTCCTCTCTTGAACATATCTAAGGTATCGAGCATAATTCAGGTTATTCCATCCCATAATGTCAATTTCGGGACAAAGCGAGCTTAA

Coding sequence (CDS)

ATCTCTATCATTCGCCCCCTCGCTCTGCCTCATAGCCTCTCCGACGTTCGCCTCCCTCTCAATCTTCACCTCCGCCTCACAGTCTCTCCATCGTTCGCTCCTCTCTTGAACATATCTAAGGTATCGAGCATAATTCAGGTTATTCCATCCCATAATGTCAATTTCGGGACAAAGCGAGCTTAA

Protein sequence

ISIIRPLALPHSLSDVRLPLNLHLRLTVSPSFAPLLNISKVSSIIQVIPSHNVNFGTKRA*
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.358690Cucsa.358690gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.358690.1Cucsa.358690.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.358690.1.CDS.2Cucsa.358690.1.CDS.2CDS
Cucsa.358690.1.CDS.1Cucsa.358690.1.CDS.1CDS


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 57..60
scor