Cucsa.356350.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356350.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pectin lyase-like superfamily protein
Location	scaffold03577 : 1118334 .. 1120109 (+)
Sequence length	752

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAATTTCCAACCACTCATCATTTCAACCAACATTCATCCTCCTCGCTCTCGTCCTTCTGATCTCCCATACAATAAGAAGATCGCACTCGGCGAATTTGTTGGACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATTCGTCGTGCATGGGCAGTGGCCTGCAAGTCTGAAGAATCTACCATTGTCTACATTCCGAAGGGAAGGTTTCTTGTCCAACCAATGGAATTCCATGGTGGAGGGTGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGAATCCTTGGTAATGTTGAAAGTTGGCTAAGCTTTGTAGAGGTTAATGGCGTTTCTTtGACTGGTGGAGTTCTTGATGCCAATGGTGAAGCCTTGTGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGGTAACTACTTCTGCAACTATCTTTCTTATTCCCTTTGGAGACTTTAAATTTTAGGACCCTCTTTTTTATTAATAAAAAAaCACTAAAATACAAAAATTCAATTTTTTATGATCACTTTTTTGGCCTAAAATAATTTATGTATTACAAATTTAGTGTTAAAAGAAGTTGTACAAAGTTTTTTTtATTTATTTTATTTTtATAAATATAGCTAAAACAATTAAAAATAAAATAGATAATAGTCCAATCACAAATATTTATATCTTCAAACGAATACACACCTTTTTTTTTttAAAAAAAAAaTCGTCATTTAATCGCACATTTATTTGTACAGTGAGAATTTTGGAACATTACCCAAATACTAATAATTTTGATTGTTATAAATACTATGTAAATATAATTCACTTTCTGGTACTTTTTTTTtCAAATAGACAAATTTTGAGTGTGTTTGGTGAGATTTTCTGAAGTGTTTAATAAAAAAaCTATTTTAAAAAAaTGGTAGTGTTTGAAAAATTAAAACAATACATTTTTTAAAAATTCATTTATAAAACAATCTATTTTGGAGAAATCTTTAAAAACCAAATTCACATGTATATACACACTTATAAGTATAACCAAATTCACATATACACGCTTATAAATTTTAAACTAATTTCCAAAAAGTGTTTAAAATGAAATGTATTATTGAAAAACATTTTGTTTTTAATTCAATCCAAACGAACCTTAATCTATACATAATAAATCTTAAAAATATTTTTTTAAAGGATCTTAGTACTAAAAATGCGGAAAAATATATCATAAACAATAGAACTGATAAAAGATATTTATAAAATATAGTAAAATTCTAGGTTTTATCAATCATGGATAATATGTTGACTATCAATGTCTACGAGTGCACTGATAAACATAGATAGCAAGTTTTGTTTATCATTGATCAAATATAAAATTTTGCTATATATTATAATTTTAAAATATAGTTAATCAAAACACATTTATCCTAAAACAAATGTTTTATTTTATGATGTAGACTCTAAGTTTTAGGGACTCAAAGAATATAAGGATTAGAGGGTTGGTGTCTAGAAACAGCCAATTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTAGAAGAAGTGAATGTCATTGCGGCAAGTAATAGTCCAAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTATCATTCAAACGGGAGATGATTGTATTTCTATCGGTCCTGGATCCTACAATCTTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAG

mRNA sequence

ATGGCCAAAATTTCCAACCACTCATCATTTCAACCAACATTCATCCTCCTCGCTCTCGTCCTTCTGATCTCCCATACAATAAGAAGATCGCACTCGGCGAATTTGTTGGACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATTCGTCGTGCATGGGCAGTGGCCTGCAAGTCTGAAGAATCTACCATTGTCTACATTCCGAAGGGAAGGTTTCTTGTCCAACCAATGGAATTCCATGGTGGAGGGTGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGAATCCTTGGTAATGTTGAAAGTTGGCTAAGCTTTGTAGAGGTTAATGGCGTTTCTTTGACTGGTGGAGTTCTTGATGCCAATGGTGAAGCCTTGTGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGACTCTAAGTTTTAGGGACTCAAAGAATATAAGGATTAGAGGGTTGGTGTCTAGAAACAGCCAATTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTAGAAGAAGTGAATGTCATTGCGGCAAGTAATAGTCCAAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTATCATTCAAACGGGAGATGATTGTATTTCTATCGGTCCTGGATCCTACAATCTTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAG

Coding sequence (CDS)

ATGGCCAAAATTTCCAACCACTCATCATTTCAACCAACATTCATCCTCCTCGCTCTCGTCCTTCTGATCTCCCATACAATAAGAAGATCGCACTCGGCGAATTTGTTGGACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATTCGTCGTGCATGGGCAGTGGCCTGCAAGTCTGAAGAATCTACCATTGTCTACATTCCGAAGGGAAGGTTTCTTGTCCAACCAATGGAATTCCATGGTGGAGGGTGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGAATCCTTGGTAATGTTGAAAGTTGGCTAAGCTTTGTAGAGGTTAATGGCGTTTCTTtGACTGGTGGAGTTCTTGATGCCAATGGTGAAGCCTTGTGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGACTCTAAGTTTTAGGGACTCAAAGAATATAAGGATTAGAGGGTTGGTGTCTAGAAACAGCCAATTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTAGAAGAAGTGAATGTCATTGCGGCAAGTAATAGTCCAAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTATCATTCAAACGGGAGATGATTGTATTTCTATCGGTCCTGGATCCTACAATCTTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAG

Protein sequence

MAKISNHSSFQPTFILLALVLLISHTIRRSHSANLLDILDFGAIRGYDSSQAIRRAWAVACKSEESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLDANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGIX

Homology

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BLAST of Cucsa.356350.1 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-58
Identity = 108/204 (52.94%), Postives = 141/204 (69.12%), Query Frame = 1


Query: 48  DSSQAIRRAWAVACKSEESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDY 107
           DS++A   AWA AC S    ++Y+P G F ++ + F  G C N  I+F I G L+ P DY
Sbjct: 42  DSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVF-SGPCKNNAITFRIAGTLVAPSDY 101

Query: 108 RILGNVESWLSFVEVNGVSLTGGVLDANGEALWSCKFSTTH-CPVGARTLSFRDSKNIRI 167
           R++GN  +W+ F  VNGV+++GG+LD  G ALW+CK      CP GA TL F DS NI +
Sbjct: 102 RVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVV 161

Query: 168 RGLVSRNSQLFHIVINGCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDD 227
            GL S NSQ+FHIVIN  +NV ++ V V  + NSPNTDGIHV+ S+ VTI++S I TGDD
Sbjct: 162 SGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDD 221

Query: 228 CISIGPGSYNLWIQRIRCGPGHGI 251
           C+SIGPG+ NLWI+ + CGPGHGI
Sbjct: 222 CVSIGPGTSNLWIEGVACGPGHGI 244

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BLAST of Cucsa.356350.1 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-58
Identity = 121/248 (48.79%), Postives = 158/248 (63.71%), Query Frame = 1


Query: 10  FQPTFILLALVLLISHTIRRSHSAN----LLDILDFGAIR--GYDSSQAIRRAWAVACKS 69
           +  + ++L L L+I      S  A+     L++L +GA      DS++A   AW VAC S
Sbjct: 3   YNTSCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACAS 62

Query: 70  EESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVN 129
              T + +PKGRFLV  + FHG  C    IS  I G+++ P D+RI+ + + W+ F +V 
Sbjct: 63  ANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVT 122

Query: 130 GVSLTGGVLDANGEALWSCKFSTTH-CPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVIN 189
            VS+ GG+LDA G +LW CK +  H CP GA++L F  S NI+I GL S NSQ FHIVI+
Sbjct: 123 DVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVID 182

Query: 190 GCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRI 249
              NV ++ V V A  NSPNTDGIHVE+S  V I +S I TGDDCISIGPGS N++IQ I
Sbjct: 183 NSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTI 242

Query: 250 RCGPGHGI 251
           RCGPGHGI
Sbjct: 243 RCGPGHGI 250

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BLAST of Cucsa.356350.1 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 88/223 (39.46%), Postives = 128/223 (57.40%), Query Frame = 1


Query: 32  SANLLDILDFGAIRGYDSSQAIRRAWAVACKSEESTIVYIPKGRFLVQPMEFHGGGCHNE 91
           S ++ ++ D+GA    D SQA+ +AW  AC S+  + V IPKG + +  +   G  C   
Sbjct: 6   SGSVFNVNDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGP-CKGS 65

Query: 92  DISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTG-GVLDANGEALWS---CKFSTT 151
            I F IDG +  P D     + + W+SF  ++G++++G G LD  G+  W+   C     
Sbjct: 66  KIGFQIDGVVKAPADPSKFKS-DGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCD-KNP 125

Query: 152 HCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNVIAASNSPNTDGIH 211
           +C   A  L F   K+  +R + S NS++FHI +  C+++  + V V A   S NTDGIH
Sbjct: 126 NCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIH 185

Query: 212 VETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           V  S  VTI ++ I TGDDCISIGPGS N+ I ++ CGPGHGI
Sbjct: 186 VGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGI 225

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BLAST of Cucsa.356350.1 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.7e-35
Identity = 80/206 (38.83%), Postives = 120/206 (58.25%), Query Frame = 1


Query: 48  DSSQAIRRAWAVACKSEESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDY 107
           DS++A++ AWA AC       + IPKG FLV P+ F G  C   D++  ++G L+   D 
Sbjct: 55  DSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGP-CKG-DVTIQVNGNLLATTDL 114

Query: 108 RILGNVESWLSFVEVNGVSLTG-GVLDANGEALWSCKFSTTH--CPVGARTLSFRDSKNI 167
               +  +W+  + V+ + +TG G LD  G A+WS         C +   +L      N 
Sbjct: 115 SQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNG 174

Query: 168 RIRGLVSRNSQLFHIVINGCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTG 227
            + G+   NS+ FH+ +  CK++L+++VNV A  +SPNTDGIH+  S+ VTI +++I  G
Sbjct: 175 EVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVG 234

Query: 228 DDCISIGPGSYNLWIQRIRCGPGHGI 251
           DDCISIGPG+  + I  + CGPGHGI
Sbjct: 235 DDCISIGPGTSKVNITGVTCGPGHGI 258

[Close]

BLAST of Cucsa.356350.1 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 90/234 (38.46%), Postives = 126/234 (53.85%), Query Frame = 1


Query: 18  ALVLLISHTIRRSHSANLLDILDFGAIRGYDSSQAIRRAWAVACKSEESTIVYIPKGRFL 77
           ALVLL       S +  + DI  +GA    D S+A+  A+  AC+S   + + IPKG F 
Sbjct: 10  ALVLLFLAHFGESQTG-VFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFT 69

Query: 78  VQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGG-VLDANG 137
           +  ++  G  C +  +   I   L  P D   L  V  WL+  +++  +++GG +LD   
Sbjct: 70  MNQVKLEGP-CKSP-LELQIQATLKAPSDPSQL-KVGEWLTVNKLDQFTMSGGGILDGQA 129

Query: 138 EALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNVIA 197
            A W CK S   C      LSF    N  I+ + + +S+ FH+ +N CKN+     NV A
Sbjct: 130 AAAWECKQSKK-CNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSA 189

Query: 198 ASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
            +NSPNTDGIHV  S+ V I DS   TGDDCIS+G  +  L+I R+ CGPGHGI
Sbjct: 190 PANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGI 238

[Close]

BLAST of Cucsa.356350.1 vs. TrEMBL
Match: U5FYY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18510g PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 137/237 (57.81%), Postives = 170/237 (71.73%), Query Frame = 1


Query: 16  LLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPK 75
           LL  + L+S  I  S +  + ++L +GA      DS+QA   AW  AC S  STI+YIPK
Sbjct: 10  LLLFIFLVSLNINISSAKTVYNVLTYGARPNGKTDSTQAFLHAWTAACGSTNSTIIYIPK 69

Query: 76  GRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLD 135
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG LD
Sbjct: 70  GRYLLGSVAFTGGNCKSPDITIRIDGTLIAPEDYRILGLASNWLSFESVSGVSIVGGALD 129

Query: 136 ANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVN 195
           A G  LW CK   ++CP GA TLSF +S NI+I GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 ARGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 196 VIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           VIAA +SPNTDGIHV+ ST V I++S I+TGDDCISIGPG+ NLWI+R+RCGPGHGI
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGI 246

[Close]

BLAST of Cucsa.356350.1 vs. TrEMBL
Match: A0A0D2TSR4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004000 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.4e-70
Identity = 134/236 (56.78%), Postives = 169/236 (71.61%), Query Frame = 1


Query: 17  LALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPKG 76
           + L+L     I  + +    ++L+FGA      DS++A   AW  AC S +STI+Y+PKG
Sbjct: 11  ILLILFFMLAINSTSALTKYNVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKG 70

Query: 77  RFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLDA 136
           R+L+  M F GG C +  I F IDG L+ P DYR+LG    WLSF  VNGVS+ GG LDA
Sbjct: 71  RYLLGSMAFQGG-CKSPQIIFRIDGTLVAPQDYRVLGKSADWLSFEGVNGVSILGGALDA 130

Query: 137 NGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNV 196
            G +LW+CK S ++CP GA TLSF +SKNIRIR L+S NSQ+FHIVINGC+NV V+ V +
Sbjct: 131 KGPSLWACKASHSNCPSGATTLSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRI 190

Query: 197 IAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           IAA NSPNTDGIHV++S +V II   I+TGDDCISIGPG+ NLWI++I CGPGHGI
Sbjct: 191 IAAGNSPNTDGIHVQSSKNVNIIKCSIKTGDDCISIGPGTKNLWIEQITCGPGHGI 245

[Close]

BLAST of Cucsa.356350.1 vs. TrEMBL
Match: B9HYF5_POPTR (Polygalacturonase family protein OS=Populus trichocarpa GN=POPTR_0010s18500g PE=3 SV=2)

HSP 1 Score: 271.6 bits (693), Expect = 9.9e-70
Identity = 134/238 (56.30%), Postives = 169/238 (71.01%), Query Frame = 1


Query: 15  ILLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIP 74
           IL  + L+  + I  S +  + ++  +GA      DS+QA   AWA AC S + TI+YIP
Sbjct: 11  ILFFIFLVSLNNINISSAETIYNVQTYGAKPNGKTDSTQAFLDAWAAACGSTDPTIIYIP 70

Query: 75  KGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 134
           +GR+L+  + F GG C + DI   IDG LI P DYRILG   +WLSF  V+GVS+ GG L
Sbjct: 71  EGRYLLGSVAFTGGNCKSPDIIVRIDGTLIAPEDYRILGLASNWLSFEGVSGVSIVGGAL 130

Query: 135 DANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEV 194
           DA G  LW CK   ++CP GA TLSF +S NI+I GL+S NSQ+FHIVINGC+NV V+ V
Sbjct: 131 DAKGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGV 190

Query: 195 NVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
            VIAA +SPNTDGIHV+ ST V I++S I+TGDDCISIGPG+ NLWI+R+RCGPGHGI
Sbjct: 191 RVIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGI 248

[Close]

BLAST of Cucsa.356350.1 vs. TrEMBL
Match: A0A0D2V8V5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004100 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 132/236 (55.93%), Postives = 168/236 (71.19%), Query Frame = 1


Query: 17  LALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPKG 76
           + L+L     I  + +    ++L+FGA      DS++A   AW  AC S +STI+Y+PKG
Sbjct: 11  ILLILFFMLAINSTSALTKYNVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKG 70

Query: 77  RFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLDA 136
           R+L+  M F GG C +  I F IDG L+ P DYR+LG    WLSF  VNGVS+ GG LDA
Sbjct: 71  RYLLGSMAFQGG-CKSPQIIFRIDGTLVAPQDYRVLGKSTDWLSFEGVNGVSILGGALDA 130

Query: 137 NGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNV 196
            G +LW+CK S ++CP GA TLSF +SKNIRIR L+S NSQ+FHIVINGC+NV V+ V +
Sbjct: 131 KGPSLWACKASHSNCPSGATTLSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRI 190

Query: 197 IAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           IAA NSPNTDGIHV+ S +V II   I+TGDDCISIGPG+ NLW++++ CGPGHGI
Sbjct: 191 IAAGNSPNTDGIHVQLSKNVNIIKCSIKTGDDCISIGPGTKNLWVEQVTCGPGHGI 245

[Close]

BLAST of Cucsa.356350.1 vs. TrEMBL
Match: A0A067DFA5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042768mg PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.9e-69
Identity = 136/246 (55.28%), Postives = 174/246 (70.73%), Query Frame = 1


Query: 8   SSFQPTFILLALVLLISHTIRRSHSANLL-DILDFGAIRG--YDSSQAIRRAWAVACKSE 67
           S F   FI+L    ++S  +  S++     ++L FGA      DS+QA  +AWA AC S 
Sbjct: 7   SLFSSLFIIL---FILSINLASSYATTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACAST 66

Query: 68  ESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNG 127
           ES  +Y+PKGR+L+  + F+G  C + DI+F IDG L+ P DYR+LG  ++WLSF  V+G
Sbjct: 67  ESATLYVPKGRYLLGSVAFNGD-CKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSG 126

Query: 128 VSLTGGVLDANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGC 187
           VS+ GG LDA G +LW+CK S T+CP GA TLSF +S NIRI GL+S NSQ+FHIVINGC
Sbjct: 127 VSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGC 186

Query: 188 KNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRC 247
           K+V VE V VIA  NSPNTDGIHV+ S +V I +  I+TGDDCI IGPG+ NLWI+R+ C
Sbjct: 187 KDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTC 246

Query: 248 GPGHGI 251
           GPGHGI
Sbjct: 247 GPGHGI 248

[Close]

BLAST of Cucsa.356350.1 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-64
Identity = 111/237 (46.84%), Postives = 159/237 (67.09%), Query Frame = 1


Query: 16  LLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPK 75
           + +L++L       S SA   ++L FGA      D+++A    W  AC S     + +PK
Sbjct: 1   MASLLVLFVFFFISSCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPK 60

Query: 76  GRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLD 135
           GRFL++ + F G  C  + ++F IDG L+ P DYR++GN + W+ F  ++G+++ GGVLD
Sbjct: 61  GRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLD 120

Query: 136 ANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVN 195
           A G +LW CK S  +CP GA T+ F+ S N+ + GL S NSQ+FH+VINGC NV ++ V 
Sbjct: 121 ARGASLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180

Query: 196 VIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           V+AA NSPNTDGIHV++S+ V+I ++ I TGDDC+SIGPG+  LWI+ + CGPGHGI
Sbjct: 181 VLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGI 237

[Close]

BLAST of Cucsa.356350.1 vs. TAIR10
Match: AT1G65570.1 (AT1G65570.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-63
Identity = 118/245 (48.16%), Postives = 159/245 (64.90%), Query Frame = 1


Query: 14  FILLALVLLISHTIRRSHSANL-----LDILDFGAIRG--YDSSQAIRRAWAVACKSEES 73
           F+    V  I  TI  SH         L++L FGA      +S++A   AW  AC  E+S
Sbjct: 4   FLSFVQVFSIVITIIMSHFGQFDARTSLNVLSFGANPNGIVESAKAFSDAWDAACGVEDS 63

Query: 74  TIVYIPKGRFLVQ-PMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGV 133
            ++Y+PKGR+LV   + F G  C + +I+  IDG LIGP DY +LG  E+W SF  V+ V
Sbjct: 64  VVIYVPKGRYLVSGEVRFEGESCKSREITLRIDGTLIGPQDYSLLGKKENWFSFSGVHNV 123

Query: 134 SLTGGVLDANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCK 193
           ++ GG  DA G  LWSCK +  +CP GA TL F DS N++I+G++S NSQLFHI IN C+
Sbjct: 124 TVLGGSFDAKGSTLWSCKANGYNCPEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCR 183

Query: 194 NVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCG 251
           N+ +E+V +IA   SPNTDGIH++ ST + + ++ I+TGDDCISIGPG+ NL +  I CG
Sbjct: 184 NIKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCG 243

[Close]

BLAST of Cucsa.356350.1 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 239.2 bits (609), Expect = 2.8e-63
Identity = 114/238 (47.90%), Postives = 161/238 (67.65%), Query Frame = 1


Query: 15  ILLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIP 74
           +L+ L+ L+S +   S SA   +IL +GA      DS++A    WA AC S +   + +P
Sbjct: 5   LLIVLLFLLSVS---SSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVP 64

Query: 75  KGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 134
           KGRFL++ + F G  C  + ++F I G L+ P DYR++G    W+ F  ++G+S+ GGVL
Sbjct: 65  KGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVL 124

Query: 135 DANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEV 194
           DA G +LWSCK S  +CP GA ++ F+ S+N+ I GL S NSQ+FH+ INGC NV ++ V
Sbjct: 125 DAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGV 184

Query: 195 NVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
            V A  NSPNTDGIHV++S+ V+I++S I TGDDC+SIGPG+  LWI+ + CGPGHGI
Sbjct: 185 KVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGI 239

[Close]

BLAST of Cucsa.356350.1 vs. TAIR10
Match: AT2G43860.1 (AT2G43860.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 225.7 bits (574), Expect = 3.2e-59
Identity = 121/248 (48.79%), Postives = 158/248 (63.71%), Query Frame = 1


Query: 10  FQPTFILLALVLLISHTIRRSHSAN----LLDILDFGAIR--GYDSSQAIRRAWAVACKS 69
           +  + ++L L L+I      S  A+     L++L +GA      DS++A   AW VAC S
Sbjct: 3   YNTSCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACAS 62

Query: 70  EESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVN 129
              T + +PKGRFLV  + FHG  C    IS  I G+++ P D+RI+ + + W+ F +V 
Sbjct: 63  ANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVT 122

Query: 130 GVSLTGGVLDANGEALWSCKFSTTH-CPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVIN 189
            VS+ GG+LDA G +LW CK +  H CP GA++L F  S NI+I GL S NSQ FHIVI+
Sbjct: 123 DVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVID 182

Query: 190 GCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRI 249
              NV ++ V V A  NSPNTDGIHVE+S  V I +S I TGDDCISIGPGS N++IQ I
Sbjct: 183 NSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTI 242

Query: 250 RCGPGHGI 251
           RCGPGHGI
Sbjct: 243 RCGPGHGI 250

[Close]

BLAST of Cucsa.356350.1 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 8.6e-57
Identity = 107/240 (44.58%), Postives = 159/240 (66.25%), Query Frame = 1


Query: 16  LLALVLLISHT---IRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVY 75
           L+A++L+   +   ++ S +A+  +++ FGA      DS++A   AW  AC+S  +  V 
Sbjct: 6   LVAVLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVT 65

Query: 76  IPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGG 135
           +P+G FL++P+EF G  C +  I+F I G ++ P DYR LGN   W+ FV+VN +S+ GG
Sbjct: 66  VPRGSFLLKPVEFRGP-CRSR-ITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGG 125

Query: 136 VLDANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVE 195
            LDA G + W+C+ S   CPVGAR+++F  + ++ + GL S NSQ  H+VIN C NV+V 
Sbjct: 126 TLDARGASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVR 185

Query: 196 EVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           +V ++A   SPNTDG+HV+ S  VT+ D    TGDDCISIGPG+ NL++ ++ CGPGHGI
Sbjct: 186 KVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGI 243

[Close]

BLAST of Cucsa.356350.1 vs. NCBI nr
Match: gi|659085882|ref|XP_008443656.1| (PREDICTED: polygalacturonase [Cucumis melo])

HSP 1 Score: 486.1 bits (1250), Expect = 3.7e-134
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 1


Query: 1   MAKISNHSSF----QPTFILLALVLLISHTIRRSHSANLLDILDFGAIRGYDSSQAIRRA 60
           MAKISNHSSF    QPT ILLALV+LISHTIRRSHSANLL+ILDFGAIRGYDSSQAI RA
Sbjct: 1   MAKISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRA 60

Query: 61  WAVACKSEESTIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW 120
           WAVACKSEESTIVYIPKGRFLVQP+EFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW
Sbjct: 61  WAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW 120

Query: 121 LSFVEVNGVSLTGGVLDANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQL 180
           LSFVEVNGVSLTGGVL ANGEALWSCKFSTTHCPVGARTLSFRDS NIRIRGL+SRNSQL
Sbjct: 121 LSFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQL 180

Query: 181 FHIVINGCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYN 240
           FHIVINGCKNVLVEEVNV+AASNSPNTDGIHVETSTHVTIIDS IQTGDDCISIGPGSYN
Sbjct: 181 FHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYN 240

Query: 241 LWIQRIRCGPGHGI 251
           +WIQRIRCGPGHGI
Sbjct: 241 IWIQRIRCGPGHGI 254

[Close]

BLAST of Cucsa.356350.1 vs. NCBI nr
Match: gi|566191496|ref|XP_006378626.1| (hypothetical protein POPTR_0010s18510g [Populus trichocarpa])

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72
Identity = 137/237 (57.81%), Postives = 170/237 (71.73%), Query Frame = 1


Query: 16  LLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPK 75
           LL  + L+S  I  S +  + ++L +GA      DS+QA   AW  AC S  STI+YIPK
Sbjct: 10  LLLFIFLVSLNINISSAKTVYNVLTYGARPNGKTDSTQAFLHAWTAACGSTNSTIIYIPK 69

Query: 76  GRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLD 135
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG LD
Sbjct: 70  GRYLLGSVAFTGGNCKSPDITIRIDGTLIAPEDYRILGLASNWLSFESVSGVSIVGGALD 129

Query: 136 ANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVN 195
           A G  LW CK   ++CP GA TLSF +S NI+I GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 ARGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 196 VIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           VIAA +SPNTDGIHV+ ST V I++S I+TGDDCISIGPG+ NLWI+R+RCGPGHGI
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGI 246

[Close]

BLAST of Cucsa.356350.1 vs. NCBI nr
Match: gi|743801446|ref|XP_011014661.1| (PREDICTED: polygalacturonase-like [Populus euphratica])

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-71
Identity = 134/237 (56.54%), Postives = 169/237 (71.31%), Query Frame = 1


Query: 16  LLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPK 75
           LL  + L+S  +  S +    ++L +GA      DS+QA   AW  AC S + T++YIPK
Sbjct: 10  LLLFIFLVSLNVNISSAKTSYNVLTYGARPNGKTDSTQAFLHAWTAACGSTDPTMIYIPK 69

Query: 76  GRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLD 135
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG LD
Sbjct: 70  GRYLLGSVAFKGGHCKSPDITIRIDGTLIAPEDYRILGRARNWLSFEGVSGVSIVGGALD 129

Query: 136 ANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVN 195
           A G  LW CK   ++CP GA TLSF +S NI+I+GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 AKGSPLWDCKSKGSNCPAGATTLSFVNSNNIKIKGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 196 VIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           VIAA +SPNTDGIHV+ ST V I+DS I+TGDDCISIGPG+ NLWI+R+ CGPGHGI
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMDSSIKTGDDCISIGPGTKNLWIERVGCGPGHGI 246

[Close]

BLAST of Cucsa.356350.1 vs. NCBI nr
Match: gi|743801846|ref|XP_011015894.1| (PREDICTED: polygalacturonase-like [Populus euphratica])

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-70
Identity = 133/237 (56.12%), Postives = 168/237 (70.89%), Query Frame = 1


Query: 16  LLALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPK 75
           LL  + L+S  +  S +    ++L +GA      DS+QA   AW  AC S + T++YIPK
Sbjct: 10  LLLFIFLVSLNVNISSAKTSYNVLTYGARPNGKTDSTQAFLHAWTAACGSTDPTMIYIPK 69

Query: 76  GRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLD 135
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG LD
Sbjct: 70  GRYLLGSVAFKGGHCKSPDITIRIDGTLIAPEDYRILGRARNWLSFEGVSGVSIVGGALD 129

Query: 136 ANGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVN 195
           A G  LW CK    +CP GA TLSF +S NI+I+GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 AKGSPLWGCKSKGRNCPAGATTLSFVNSNNIKIKGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 196 VIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           VIAA +SPNTDGIHV+ ST V I++S I+TGDDCISIGPG+ NLWI+R+ CGPGHGI
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIRTGDDCISIGPGTKNLWIERVGCGPGHGI 246

[Close]

BLAST of Cucsa.356350.1 vs. NCBI nr
Match: gi|763811681|gb|KJB78533.1| (hypothetical protein B456_013G004000 [Gossypium raimondii])

HSP 1 Score: 272.7 bits (696), Expect = 6.4e-70
Identity = 134/236 (56.78%), Postives = 169/236 (71.61%), Query Frame = 1


Query: 17  LALVLLISHTIRRSHSANLLDILDFGAIRG--YDSSQAIRRAWAVACKSEESTIVYIPKG 76
           + L+L     I  + +    ++L+FGA      DS++A   AW  AC S +STI+Y+PKG
Sbjct: 11  ILLILFFMLAINSTSALTKYNVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKG 70

Query: 77  RFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLDA 136
           R+L+  M F GG C +  I F IDG L+ P DYR+LG    WLSF  VNGVS+ GG LDA
Sbjct: 71  RYLLGSMAFQGG-CKSPQIIFRIDGTLVAPQDYRVLGKSADWLSFEGVNGVSILGGALDA 130

Query: 137 NGEALWSCKFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVINGCKNVLVEEVNV 196
            G +LW+CK S ++CP GA TLSF +SKNIRIR L+S NSQ+FHIVINGC+NV V+ V +
Sbjct: 131 KGPSLWACKASHSNCPSGATTLSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRI 190

Query: 197 IAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRIRCGPGHGI 251
           IAA NSPNTDGIHV++S +V II   I+TGDDCISIGPG+ NLWI++I CGPGHGI
Sbjct: 191 IAAGNSPNTDGIHVQSSKNVNIIKCSIKTGDDCISIGPGTKNLWIEQITCGPGHGI 245

The following BLAST results are available for this feature:

BLAST of Cucsa.356350.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_PRUPE	1.9e-58	52.94	Polygalacturonase OS=Prunus persica PE=2 SV=1	[more]
PGLR6_ARATH	5.6e-58	48.79	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S...	[more]
PGLR2_PLAAC	2.2e-38	39.46	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR3_MAIZE	8.7e-35	38.83	Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1	[more]
PGLR_TOBAC	1.5e-34	38.46	Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1	[more]

BLAST of Cucsa.356350.1 vs. TrEMBL


Match Name	E-value	Identity	Description
U5FYY7_POPTR	1.2e-72	57.81	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18510g PE=3 SV=1	[more]
A0A0D2TSR4_GOSRA	4.4e-70	56.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004000 PE=3 SV=1	[more]
B9HYF5_POPTR	9.9e-70	56.30	Polygalacturonase family protein OS=Populus trichocarpa GN=POPTR_0010s18500g PE=...	[more]
A0A0D2V8V5_GOSRA	1.3e-69	55.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004100 PE=3 SV=1	[more]
A0A067DFA5_CITSI	2.9e-69	55.28	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042768mg PE=3 SV=1	[more]

BLAST of Cucsa.356350.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43870.1	1.9e-64	46.84	Pectin lyase-like superfamily protein	[more]
AT1G65570.1	1.6e-63	48.16	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	2.8e-63	47.90	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	3.2e-59	48.79	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	8.6e-57	44.58	Pectin lyase-like superfamily protein	[more]

BLAST of Cucsa.356350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085882\|ref\|XP_008443656.1\|	3.7e-134	94.09	PREDICTED: polygalacturonase [Cucumis melo]	[more]
gi\|566191496\|ref\|XP_006378626.1\|	1.8e-72	57.81	hypothetical protein POPTR_0010s18510g [Populus trichocarpa]	[more]
gi\|743801446\|ref\|XP_011014661.1\|	2.6e-71	56.54	PREDICTED: polygalacturonase-like [Populus euphratica]	[more]
gi\|743801846\|ref\|XP_011015894.1\|	1.7e-70	56.12	PREDICTED: polygalacturonase-like [Populus euphratica]	[more]
gi\|763811681\|gb\|KJB78533.1\|	6.4e-70	56.78	hypothetical protein B456_013G004000 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.356350	Cucsa.356350	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.356350.1	Cucsa.356350.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.356350.1.CDS.1	Cucsa.356350.1.CDS.1	CDS
Cucsa.356350.1.CDS.2	Cucsa.356350.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 61..250 score: 7.0
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 25..250 score: 2.69
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 18..250 score: 8.9
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 14..250 score: 3.6E
None	No IPR available	PANTHER	PTHR31375:SF2	POLYGALACTURONASE/PECTINASE	coord: 14..250 score: 3.6E