Cucsa.349130.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGTACATATTCTTAATCTATGATCTTAATTAATATATTATATATCCTACCACCTTTGTTTGAACCTTAATAATTTAAATGTTCAACAACATTATTTTGTTATACTGAAAAATTCTATCATATTTTTCATTAATTCTTTAAGTTCAACCTTTTTAAAATTTATTTGCACCAAAATCTATATATATATATGTTTGAGGATTGACTAGTCATAGTTGAAATTGAAAATTTAGCTAGAGATGTATTAGAATTTTTTCAAGTTTGAAGAACTATTAGACGACATCATTTCTTTAAGTCTAGAAACTTGTTAGACGTATGAAATTGGAAGTTTGAAGATCTATTAAACATTTGAAGAGAAAAACAAATGAATTTTATTAGGTCTGAAGAGCACTGAATGATGATCAATCATATTCTAAGTAATGCAAAAAGGAAAAGGCTTGACGTTGGATGATAATCATTCACCAATTATCAGGATGTCTTTTGCTACACATTTTTTTATTGGATATGGTTCACGTACTTTATGAATTCTCTAATAATATACCTTATTAAATAAACTCGAGGTTAATCGATTAACGACAAGAGGAATAATTAATTCACCTTTCTTAATTATATAAATATATACGAGATGAGATCCTCAACATTGCTTTCATCAAAATTTTAATAATTATAATTTGGATGATTTTGGTTCTAACAAGTTGGAAGAGAAACTTTGACTTCACTAATTATAAGCAACTTATCATTTTACTCTAAAGATGAGCCAACGATAACAAACAAGAAGCACATTCTGTATAGAGCCTCATTGTTGTATAAGGATATTAAAAATAAGCAAAATGAAGGAAATGCTTGCGTCCACCCGCCCATTTGTGGTGGTAACCTTTTAAAAAAAAGAAGAATATATAAAGAAACGAACAACGACAGAAATGACGACGACGAATTCAAGCATGTAGTAAATACTCAAATCATTCCACAAGCAACATTACTTCGCGATGCTGGAATAAAAATTCGAAAAAGCAAATAAAAAAGCCTCGAAGACGTGAGTTTTGAAAATGGCGTGTTGAAACTGGCAAGTCTAATCATGAAGCTGAAACAAATTTACTAAATGTGATGGTATTTGAGAAATTGCACGATGGTGTTGGAAATGAAGTGACATCTTTTATAATGATGATGAATAATTTGATCGACATAGATAAAGATGTCGAGCTATTGTCAAAGAGAAATATATGCCAATGCACTTGGAAACAATGAAGACGTGGAAAATTTGTTTAGTGTGCTTGGGAAAGGAGTGCCTATTATATTGATTCGAATAGCAAAATAATAGAAGTACATCATTAAGTGAATGAATATATTTATTGTGATGAATCATGGAATAGATGGTGTGTGCTAATTTTAAACACAAATACTTCGATAACCCATGGTCTATTATCTCATTCAATGCCGCTATTTTCGGTTTCGTTATCCTTATTGTTCAAACAATCTACCAAGTTAATTGTCGACTTCTAAACAAAGAAAATAAAAGGGAATCAATAAACATTATCGTCTTTGAATAATAAGTTGTCATGATATGATAAACACTTCCATTATTATTTTCTTTTTGTACAATGATATGAATATTAACTGTATAATAAATTTAATTTAGACATGCATGCATCCATGTATGTCTTTATCAAGCTTTGTTTTGGATTTTTTTTCGTTTGTATGATTGTCCTACTTTATATTTATATATATGTATGTATTGAGGATTTGAAAGGATGTATATAGCTTAATCACATTTTCAAGCATTGTATTTAATAAATTGTTCAATCTTAACTTTGACGTGTCAAATTATTTTTTTTTTCGGAAGAATATGGTTAATGTGGAGAATGATACATATTAAGTATTACTTTTTTAAAAAAGAGATTAATTGAAAATGTAGCAACCAAATCAAAATGATTAGCAAAATATTGTATAATTCAAAACACTAATTTAGCAAAATTACAGACACCATATTTTTTCTTAGCGGCGAAGAAGAGAAAAAAGAAAAGGAAACTCCATTTTTTCTCTTAACTTTTGAAGAAAAATCATTCTCACTCTGTCTTGACTCTCCCCATCTTCCCGACCTTCAATCTCTCTCGAATCTCTCCGGCCGACATTTCCCAACCTACCCACTGCCCCAATTTTCCATTACCTGCTTTTTATCTTTCGAATTTCAGCTGGGAAAAACAAAAATACCCAACCCATCAAACTCCGTAAGAGAAAACACCACGAGGCGTTCGCTAGTTGTTGGGCTAAAAAAGAGGGCGATCTCCTTATCAACCATAGGCACCAGGAAGATTCCGCCGCCGCTGCTGCACCTGTCGTTCACGATGCCGATGGCTTTGATGGCGGCTTTTCTTCCCTCCATAGCATTTTACAGTGGGCTATACGTACTCTTTTATTCATGATTGTATTTCATGCTCAGATATAAGGTCATGCCTTTAAATGGTAGTATTAGCAATAATCACTGGAATTCATGCCAATGGGCCTTGTGTAAGACATTGGGGGAATTACTTGAGATGTCTTTGCAACATTGTTCGGCACAAGAATACTTCAAACTTAACTTAATTTATGATTCTAGACTTTAAAGATTCTTTCTTCATATTATAATGTGGCATAAGTTATACATTTTGTCTATCAAAGAAGAGTTCTTACCGTGAATAGAAGATGAAGGTAGGGTTGAGGTAAGTTAGTTGTAACCTAACCTAACCTAACTCAGCAACGGTAGACAGGAAGAAGATGGTGAAATTCTCTTGCAACTATCCATGTGTGAGGTTGATTATTTAAACTAAATTAACTATTTTTATTGAGAAAAATTAAACGAAAGAACAGAAAGACATGCAGAAAACCCAAAGAGATAAAAACATTACTAAAGGGTCAATCAAGAAAAATAATGCCTATAGAATAATTTAAAAAACAAAAATTACTAGGCTTCCTATCCAACTCATTATATTAAACTTTGTATTCTACCTTTCCCCAAAAGATTCCACGTGATAGCGCCCTCATCCATGTGTCAACGACGAGGAACAATATATCCTTTCCACCGTGGGGTTGATGAAGAAGAAACTCACTGATCATATCTTTGATGCCTAATTGTATCTGCTTGATGACGACTAAACCCAAAGGAAAAGGAAAACAAACTTCCTCAAATGTCTATAATATGCTTTCTATACAGAAAAAAAAATTAATTTGTCAAAATAATTTCAATAATTTTTTAAACCTTATCTAACACAAAATTCCTAAAAGCTATTACAAAATTATGGAGGTTTAACATTACGTAGTCACATGCACACTAATTAAGAAGTCGTGTAGAATGTTTCTTTCCGACAAAAATTCATTTTCACTTGTGGTGCTTTCTTCTTATATCGAACTCACAAGTGAGGGATCGAGTTAAGTAATATATTTAATATTAAATTTATCTTCATTATTTATTAGCTTAATCTATTGGATCAATCAACAACGATTGAATTGATTTTTTTAAAATTATCTCATCTTAGGTTGTTATAATATATTAAGTGAATATGACTTTGGCATCAAAAGCACAACTCACATTTCGTTTCAGACAACTTTGAGTCCTAAGAAATTTACCATTTTTGTTGTTCAAAGTGAAGTTTAATTCATTTTTTTAAAAAATAATCCATATTAAAACTTAGATTTTTTATAAAAGAAATAAACTAATCAGAGTTGGGATGAAATTATGGTAAATAACAAAATTGTTTAAAATAATTATATGAAAATTTGATATATTTCATATATATTTTGCTTTATATTAAAAATGTGTTATTAATTTAATAAAACTCAATAATTAATAAAAGAAAACATTTGAAATCAAGTGAGAACATTAAAAGATGAAGAAAGCAAAGTAAAAGCAAAAGAGATGAAAGTGAATTCTTGCCAATCAAGGCAACTTTTATTCATCCTAAGATTGATGCCCAATGTTTACAAATTAGATTTATTCAAAAAAAGAAAAATGTATGTTTCATTCCATTTTATATATTCATTCAATTTACTGATCACATTTCAAAAAGACAGAAACCTTTAATAAATATTATTATATCAATTATTCATTTTTTTCAAACAAAATATATAATGAAAAAACTTCTCAAAAATATTCATGAGTACAGCTAAATATACATATCCTGAAATAATAATATAAACTACCTTATATGTCTATTGGTATAATAATGGATACATATATAATATAGTTTGATCTATCCAGATAAATATATTTTATAAATATTTTGATATTTTTGCTATATTTAAAAATAATATTAGTAGTAACACAATATAATATATATTATAAACTTATTTGATATTGTAAAAAATTAATTTTGGTAAGTAAACTCTAACTCATTTTTATAATTTTTAATTACGTTTTATAAAATAAAAACATTTCGAATCATTTTTTTAAAGTAAGATCTAACTTTTGAATCCAGTTTCAAATACACATCCAAGAAAGGAATTTGAGTTTCTTTTTTCAAATATTATTGTCTACCAAACAAAATTCTTAACTTTCTAAAGAATTTAGTTGTGATCTTAATACTAACATTAGAGTTTATTTGAATTTGATTGATAGATCAATGTCCATACAAAAATTGATGGACTGAAGTATTTTGTTATATTTACAAAATAAGTTAAACAATACCCCTTAAAAATAGAAAAGGTATTTTCAATTTCACTTTATACAAAGTGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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AGTTCATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGATCAAAATACAACTTTGACTTCACTTATAAGCAACTTATTGTTTGTCGAGAAAGATGAGCTAGCGATAGTGGAAAAGAAGCACATTTTACATATGTATAGAGCGTCATTATTGTATCCATCTACTCTAAGCTATCCCAATATGGATGAAATAAAGAAAAATAACAAGGACGACAAATTCGGGCTAAAGTGTCAACTCATTCCACAGGCAACACTACTTCGCGAAGCTGGAATAAGATTTCGAAAAAGTGAAAACAAAAGCCTTGAAAACGTGAGTTTTGAAAAAGGCGTGTTGAAACTGCCACTTCTAATTGTAGATGATAATACCGAAACAAATTTACTAAATGTGATGGCATTTGAGAAACTCCATGACGTTGGAAGTCAAGTGACATCTTTTGTAGTGTTGATGAATAATTTGATCGACATTGATAAAGATGTCGAGCTATTGTCGAATGATAATATAATAGCCAATGCACTTGGGAACAATGAAGAAGCGGCGAATTTGTTTAGTGTACTTGGGAAAGGAGTGTCTCTGGATTTGGGGAGCAATAATTTAACAGAAGTGCATCAATTGGTGAATATACATTGTGATGATTCATGGAATAGATGGTGGGCTAATCTTAAACACACTTACTTTCAAAACCCATGGGCTATTATCTCATTCTTTGGTGCTATTTTTGGTTTCGCTATCCTTATTGTTCAAGCCGTCTACCAAATTGTTGACTTCCACACAAAATAG ATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGATCAAAATACAACTTTGACTTCACTTATAAGCAACTTATTGTTTGTCGAGAAAGATGAGCTAGCGATAGTGGAAAAGAAGCACATTTTACATATGTATAGAGCGTCATTATTGTATCCATCTACTCTAAGCTATCCCAATATGGATGAAATAAAGAAAAATAACAAGGACGACAAATTCGGGCTAAAGTGTCAACTCATTCCACAGGCAACACTACTTCGCGAAGCTGGAATAAGATTTCGAAAAAGTGAAAACAAAAGCCTTGAAAACGTGAGTTTTGAAAAAGGCGTGTTGAAACTGCCACTTCTAATTGTAGATGATAATACCGAAACAAATTTACTAAATGTGATGGCATTTGAGAAACTCCATGACGTTGGAAGTCAAGTGACATCTTTTGTAGTGTTGATGAATAATTTGATCGACATTGATAAAGATGTCGAGCTATTGTCGAATGATAATATAATAGCCAATGCACTTGGGAACAATGAAGAAGCGGCGAATTTGTTTAGTGTACTTGGGAAAGGAGTGTCTCTGGATTTGGGGAGCAATAATTTAACAGAAGTGCATCAATTGGTGAATATACATTGTGATGATTCATGGAATAGATGGTGGGCTAATCTTAAACACACTTACTTTCAAAACCCATGGGCTATTATCTCATTCTTTGGTGCTATTTTTGGTTTCGCTATCCTTATTGTTCAAGCCGTCTACCAAATTGTTGACTTCCACACAAAATAG MEMMIIDACFVLVFFSKDKIYKSLITFKSDIKRDILLLENQLPFQLLQLMYEIFPLKDQNTTLTSLISNLLFVEKDELAIVEKKHILHMYRASLLYPSTLSYPNMDEIKKNNKDDKFGLKCQLIPQATLLREAGIRFRKSENKSLENVSFEKGVLKLPLLIVDDNTETNLLNVMAFEKLHDVGSQVTSFVVLMNNLIDIDKDVELLSNDNIIANALGNNEEAANLFSVLGKGVSLDLGSNNLTEVHQLVNIHCDDSWNRWWANLKHTYFQNPWAIISFFGAIFGFAILIVQAVYQIVDFHTK*
BLAST of Cucsa.349130.1 vs. Swiss-Prot
Match: Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 7.0e-31 Identity = 101/327 (30.89%), Postives = 167/327 (51.07%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. Swiss-Prot
Match: Y3264_ARATH (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.6e-14 Identity = 50/171 (29.24%), Postives = 91/171 (53.22%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TrEMBL
Match: A0A0A0K9F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G089270 PE=4 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 4.8e-135 Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TrEMBL
Match: E5GB49_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 5.0e-108 Identity = 213/311 (68.49%), Postives = 248/311 (79.74%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TrEMBL
Match: A0A0A0KAA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091270 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 9.1e-102 Identity = 197/249 (79.12%), Postives = 221/249 (88.76%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TrEMBL
Match: A0A0A0KAA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091270 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33 Identity = 118/312 (37.82%), Postives = 169/312 (54.17%), Query Frame = 1
HSP 2 Score: 212.2 bits (539), Expect = 8.6e-52 Identity = 126/324 (38.89%), Postives = 189/324 (58.33%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TrEMBL
Match: A0A0D2SPR7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G003900 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 7.3e-51 Identity = 130/326 (39.88%), Postives = 193/326 (59.20%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TAIR10
Match: AT3G50120.1 (AT3G50120.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39 Identity = 110/341 (32.26%), Postives = 177/341 (51.91%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TAIR10
Match: AT3G50130.1 (AT3G50130.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 151.8 bits (382), Expect = 7.0e-37 Identity = 109/332 (32.83%), Postives = 176/332 (53.01%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TAIR10
Match: AT3G50140.1 (AT3G50140.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36 Identity = 103/333 (30.93%), Postives = 175/333 (52.55%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 145.6 bits (366), Expect = 5.0e-35 Identity = 96/313 (30.67%), Postives = 156/313 (49.84%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 142.1 bits (357), Expect = 5.5e-34 Identity = 102/339 (30.09%), Postives = 166/339 (48.97%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. NCBI nr
Match: gi|700191196|gb|KGN46400.1| (hypothetical protein Csa_6G089270 [Cucumis sativus]) HSP 1 Score: 488.8 bits (1257), Expect = 6.8e-135 Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. NCBI nr
Match: gi|778711703|ref|XP_011656783.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 7.1e-116 Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. NCBI nr
Match: gi|307135819|gb|ADN33691.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 399.1 bits (1024), Expect = 7.1e-108 Identity = 213/311 (68.49%), Postives = 248/311 (79.74%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. NCBI nr
Match: gi|659120434|ref|XP_008460192.1| (PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]) HSP 1 Score: 399.1 bits (1024), Expect = 7.1e-108 Identity = 213/311 (68.49%), Postives = 248/311 (79.74%), Query Frame = 1
BLAST of Cucsa.349130.1 vs. NCBI nr
Match: gi|659120434|ref|XP_008460192.1| (PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43 Identity = 123/308 (39.94%), Postives = 183/308 (59.42%), Query Frame = 1
HSP 2 Score: 378.3 bits (970), Expect = 1.3e-101 Identity = 197/249 (79.12%), Postives = 221/249 (88.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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