Cucsa.348580.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAGAATATCAAAGAGAGATCTAGAGAGAGAGAGAGGGAGAAGGCATATTTGGTAGCCTTATTTACAAAAAaTTTGAAGGCAAAAaGAAAACCCCAAGAATTCTTGTTTGGAGACTCTCTCAAACAAAGTGTCTTAAATGAGAATTTTTGGGTGTCTTTGTGAATATTACTCATCTAATCTGCAAGCTCCATATTCAAATCTAATTAGCTTGCTAAGTTGTTCATGCCAGAACCAAACACCTCAAATAATCCAAGGTACGTACTACAATTTTCTCTTCTCTCTCTTTTCAATTATATGCTTTAAATTGTTGAACTTGAATTTTGGTGATTTAAGACAATTTTCGAAGTTTTTCTTTGTGGGTTTTGTATCCAAATTGTGGCACCTCTAACTTTTCTCTACAACTTATATTATTGTGTTAAATTATGAAGGAAAATCAAAGTCTCTTTGTGGGTTTTACTGACCACCTTATTGGCTCTTTTCCTATAATATTATGTTAAAATTTTGAAGGCAATAATAATAATTGGAAGCTCTTACCTTTCTCTGCCTCTCACTATCTTTCACTGTATATTCAATCTTTCATCCCCAAATTTTCAGTCCTTTCACAATCACGAGAAAACCAACAGTAGAATTTGATGGGATCAATTATTATTAAGCTTAAGTTCACTTAGAGAGAAAATTCGATGGTTTTTtCTTTTtAAAATAGTCAGTAGAGAGTTAGATTTTTCTTTTTtCATAATTGTGAGAGTGAATTCACATCAGGGTGAAATTTGCAAACCATCAACTTTTTACTATTCATATAAACAATAGAGAAGTTTGAAAGTATTTGAAAAGTATTGAGAACTTGACTTTGGTTGGAAGAAGAAGGTGAAAATTAAAACTGGGCCATTAACGTCACTTCTTAGGTTTGGGCTTAAACTTTTGGCCCATTGTCAACTAGCCCAAAATTTAAGTAATAGTACAATTTAATTTGATAATTAAAACATAAATATAGCTTAATTTTTATAAAATTTTTCTATTATCAAAATAAACATGTCACCTTTTAATTTCATCATTGATTTTCTCAAACCACTTTGGCTTTATAGTTTTGAAGTCATTTTATTAACTTTACACATGATAACACATTTCTATTTTTCTAAGAAAAATAACACTAATTTGCTTTCCTTATACATTAGAAAATTCTTTAATTATAGTAAGATAGACTTGGCCCCAATATGTTTGAACAAGTCTTGTTTTGTTATTTGTTAGTTTGTTTTTAAACTCAACAACAACTCTAGACCTAAAGTTGGGTTTGTCCGACATCATCGAGTGAAAACAGAGCCTCCCATTCTTGGAATTTTTTTATGTACAAATTAGCTGATTCCTAGCTCTTTCGTCTCAAATTCTAACCCTTTAAAGGTTTTTCCTCTAAAGGGTCTTTCCTATTTCTCAATTGGAAAGAAAAAAAGTTAGCTTAAACTTTCGTGTTAACTGATGATTTAAGATGGAATCAGAGCAAATGCGTTGTTATTTCTTCTCCGATTAATATTCATTTCCACCACTTGTTGGATCTTTTATGATATAAGTTTTGTGTCAATTTACGAAGAAAATGGTATTTCGCAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTAATAGCTGAGGAAGAACAATGCCATACATTTAATATATAATAATATAGCCTCAAAAAGGAAAAGTTGTTTAATAATTTAGTTCTTAATGTCAAGACTTGTAAAGTTTTGAACTTTCTTCTTCTTCTTCTTTTTCTTTTTGCAAAATTTTTCTAGTAATGTCTTTGTGCAAAGGGTCTTGCATTGAAGCACTTTAGATGCAAATTTTGCTAATATATATAATTTATTTATAAAAAAAAaGTCAAATATATATCTTCTCCAAATTTAAAAAGTAATTTGATTAATCAAGTTGTTTAAACGATTTTCGATCCGTTTTAAAACTTTTGCTTTTTTCTTTAAAAAATAAATCGCTATTTAAAAACATTAAAGCGTAGGGACAATTAAAATCATGCCTAAAATTATTGTTCACAAAATTTGTTATCGATCATAAAAATTAAAAAAAAaTAGTTCTAAAAACAAATTATAAAAAATGAATATTTGTTGAATCGTTTTTTAATGAATCTAAAAACATAAAACACATAAATAAATCAATCAATCTTTAAACTATTTATTTAACATATTATAATTGGATAAATAGTTAATTCTTAATTATATGTAATTTTTATGTGCAGAATAGGGTTTGAGGGCAAAGAGATCAAATTAAAGTGTAGAAGAATAATATATGGAAGAACAAATTTTGA AATAAAGAATATCAAAGAGAGATCTAGAGAGAGAGAGAGGGAGAAGGCATATTTGGTAGCCTTATTTACAAAAAATTTGAAGGCAAAAAGAAAACCCCAAGAATTCTTGTTTGGAGACTCTCTCAAACAAAGTGTCTTAAATGAGAATTTTTGGGTGTCTTTGTGAATATTACTCATCTAATCTGCAAGCTCCATATTCAAATCTAATTAGCTTGCTAAGTTGTTCATGCCAGAACCAAACACCTCAAATAATCCAAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCaacaataataataacaatggcaataatactactaatcatattaTCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGAACAAATTTTGA ATGCCAGAACCAAACACCTCAAATAATCCAAGGAAGCCGTGGTATCAAAGAGCAATGGAAATAGTGGGAACTCAATGGAAAACAACAAGTTCAAAAGCAAGAGAAATCACAATTGCAACAGCAAATGGGGCATTCAATTCCAAGGCAAATAATGGGAATAACAACAACAATAGTAGCAAGTACAACAAAATGAGAAAATGCACTTCTCTAAAGATAGCAACTTCATTCACAAGAGTATGTCTTTGTGCACCAATCTCTTCTTACAATGAAATTTTTCAACAAGCTGAAATTCCACCGAGAAGAAGCCATAGCTATCCAAGATCTAAGCCTTTTCCAACCAACAATAATAATAACAATGGCAATAATACTACTAATCATATTATCACACATGAAAGAGTACTTCTTCCAAGTGCAAGACTTAGCGGCGAAAGTAGTCGACGGTTTTTTCGAGGAAAGTCTCTCACGGACGACGTTTTGATGCGGAGGTTCGTGGTCGAAGAAGAGGCAATGATGCAAGTGAGGAGGAGAAACCAAATGGAAGTAATAAGGAAAAGGAATTTGATGAGGAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGAACAAATTTTGA MPEPNTSNNPRKPWYQRAMEIVGTQWKTTSSKAREITIATANGAFNSKANNGNNNNNSSKYNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPRSKPFPTNNNNNNGNNTTNHIITHERVLLPSARLSGESSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEVIRKRNLMRRRKKLGPSPLSKMNKF*
BLAST of Cucsa.348580.1 vs. TrEMBL
Match: A0A0A0KBW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087190 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-105 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. TrEMBL
Match: V4VSE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022275mg PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.0e-51 Identity = 121/208 (58.17%), Postives = 144/208 (69.23%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. TrEMBL
Match: A0A022RPU8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014052mg PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50 Identity = 119/205 (58.05%), Postives = 144/205 (70.24%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. TrEMBL
Match: A0A151S4X5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028403 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 9.3e-50 Identity = 120/206 (58.25%), Postives = 138/206 (66.99%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. TrEMBL
Match: B9T0X2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 9.3e-50 Identity = 127/224 (56.70%), Postives = 140/224 (62.50%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. TAIR10
Match: AT3G59680.2 (AT3G59680.2 unknown protein) HSP 1 Score: 174.5 bits (441), Expect = 6.8e-44 Identity = 96/196 (48.98%), Postives = 129/196 (65.82%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. NCBI nr
Match: gi|449445670|ref|XP_004140595.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X2 [Cucumis sativus]) HSP 1 Score: 412.5 bits (1059), Expect = 4.2e-112 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. NCBI nr
Match: gi|778711494|ref|XP_011656743.1| (PREDICTED: probable myosin light chain kinase DDB_G0279831 isoform X1 [Cucumis sativus]) HSP 1 Score: 407.9 bits (1047), Expect = 1.0e-110 Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. NCBI nr
Match: gi|700191135|gb|KGN46339.1| (hypothetical protein Csa_6G087190 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 2.3e-105 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. NCBI nr
Match: gi|659120097|ref|XP_008460011.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X2 [Cucumis melo]) HSP 1 Score: 373.6 bits (958), Expect = 2.2e-100 Identity = 188/202 (93.07%), Postives = 192/202 (95.05%), Query Frame = 1
BLAST of Cucsa.348580.1 vs. NCBI nr
Match: gi|659120095|ref|XP_008460010.1| (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]) HSP 1 Score: 369.0 bits (946), Expect = 5.4e-99 Identity = 188/203 (92.61%), Postives = 192/203 (94.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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