Cucsa.340880.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.340880.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ankyrin repeat protein
Location	scaffold03356 : 3258912 .. 3259649 (-)
Sequence length	738

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

mRNA sequence

ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

Coding sequence (CDS)

ATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAAGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGACCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCGTGTTTGGGATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

Protein sequence

MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN*

Homology

[Close]

BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LGA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846570 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 2.7e-128
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 1


Query: 11  MKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 70
           MK+GKMSMKDAMAAPNV KRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE
Sbjct: 1   MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 60

Query: 71  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 130
           VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK
Sbjct: 61  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 120

Query: 131 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 190
           SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT
Sbjct: 121 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 180

Query: 191 AMVFRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 246
           AMVFRNKTAQSYLLDLL VW GLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN
Sbjct: 181 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 235

[Close]

BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LFQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846590 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36
Identity = 108/268 (40.30%), Postives = 139/268 (51.87%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPN------VTKRSKNWNIQQSKRREGSSKKKRKGQW 60
           M+ YLL+  ++K     + +  A+ +      + K S   N +  K R+   K   K +W
Sbjct: 218 MVGYLLSALEVKTETSIITNLEASDDTHESLELQKLSNTRNPRGKKSRKHGLKNTSKLRW 277

Query: 61  QIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGP 120
           + W+ NLKYKGDW QEVQGT+MLVATVIATVTFQ  +NPPGG WQQD    S  +    P
Sbjct: 278 RAWRMNLKYKGDWFQEVQGTMMLVATVIATVTFQAGLNPPGGVWQQDTPFNSSSYFNNDP 337

Query: 121 VHM---------------------EIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVI 180
            +                       I   GTAIM       Y+ Y   N+ISF AS+SVI
Sbjct: 338 YYRPFNSSSYFSYYPYDSPRIPLGNIFPAGTAIMMYFKPYRYSYYMQVNTISFLASISVI 397

Query: 181 LLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGL 233
           LLIV  FPLKNKI  WLL +AM +AVV L   Y +G AMV       S + D L  ++ L
Sbjct: 398 LLIVGRFPLKNKICSWLLALAMCVAVVTLGNGYFSGVAMV-----NYSGMNDSLSAFNSL 457

[Close]

BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287040 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 91/204 (44.61%), Postives = 123/204 (60.29%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSS---KKKRKGQWQIW 60
           M+ YLLTI + K      K+ +       +++N   +++KRRE  S   KKK  G W++W
Sbjct: 236 MVGYLLTIPEAKTRTNDTKEKILESQKITKARN---RKTKRRELVSLCTKKKSIGLWKVW 295

Query: 61  KKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWK------- 120
           KK LKYKGDW+QEVQGT+MLVATVIATVTFQG +NPPGG WQQD       +        
Sbjct: 296 KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPPGGVWQQDTPFVYSSFNDATKNCL 355

Query: 121 QEGPVHMEIQDV------------GTAIMACKSLQIYTSYFISNSISFFASVSVILLIVS 180
            E  ++  + D+            GT +M  +  ++Y+ Y   N++SF AS++VIL+IVS
Sbjct: 356 NEFYMNFGLYDLFSYSNTTVLFAAGTGVMKSQQPEVYSIYIWVNTVSFLASMTVILMIVS 415

Query: 181 GFPLKNKIFRWLLTVAMTIAVVFL 183
            FPLKN+I  WLL  AM IAV+ L
Sbjct: 416 RFPLKNRICSWLLAFAMCIAVLSL 436

[Close]

BLAST of Cucsa.340880.1 vs. TrEMBL
Match: A0A0A0LCQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G847090 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31
Identity = 102/278 (36.69%), Postives = 143/278 (51.44%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQ-----QSKRREGSS----KKKRK 60
           M+ YLLTI ++   + SM D  ++ N  KR ++  I      Q +RRE  S    KK ++
Sbjct: 223 MVGYLLTIPEVNT-RTSMTD-FSSSNRRKRLQSRKITITKSLQRQRRESISLWTTKKLKR 282

Query: 61  GQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSC---- 120
             +    K L+Y+GDW+ EVQ T+MLVATVIATVTFQG +NPPGG WQQD          
Sbjct: 283 RTFDKMSKKLEYQGDWVHEVQDTMMLVATVIATVTFQGGVNPPGGIWQQDTSFNYSDFNN 342

Query: 121 ------RWKQEGPVHMEIQDV-------------GTAIMACKSLQIYTSYFISNSISFFA 180
                 +W +   ++ ++ +              GT +M  +  QIY  Y   N+ISF A
Sbjct: 343 STNSWNQWFKSLSLYDDLTNTINPNNNLTVLFPAGTGVMGYQQPQIYWIYLCVNTISFLA 402

Query: 181 SVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMV--------FRNKTAQ 239
           SVSVIL+IV  FPLKN+IF W+L++ M  AVV L   Y+ G  M+         +     
Sbjct: 403 SVSVILMIVGRFPLKNRIFSWILSLTMCTAVVSLAIGYLIGVKMINLMAIEDYIKFNEFD 462

[Close]

BLAST of Cucsa.340880.1 vs. TrEMBL
Match: W9QL39_9ROSA (Ankyrin repeat-containing protein OS=Morus notabilis GN=L484_013457 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29
Identity = 79/211 (37.44%), Postives = 125/211 (59.24%), Query Frame = 1


Query: 23  AAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVI 82
           ++ N  K   N  +  SKR++ S     +  W+  K+ LKYKG W+ + +G++M+VATVI
Sbjct: 243 SSQNRDKPGNNKQLAASKRKKKSGGFFLRRWWRKLKELLKYKGQWMDDKRGSIMVVATVI 302

Query: 83  ATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISN 142
            T+TF  A++PPGGTWQ+    +     +    +M +   GT++MA  +   Y+ + +  
Sbjct: 303 GTMTFTTAMSPPGGTWQETTIESFNGMFKCSKENMCL--AGTSVMAQLNPDTYSIFLLCI 362

Query: 143 SISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSY 202
           S+SF AS+S ILL+VSGFP+KNKI  WLLT+AM  A+ F+  A++ G  MV  N   + Y
Sbjct: 363 SLSFLASISAILLLVSGFPIKNKICMWLLTMAMCGALTFMAIAFLIGLRMVSPNSMVEIY 422

Query: 203 LLDLLRVWDGLVGLVILGCIILPFFIWLLKK 234
           +  L+  W G++  V L    +   +WL++K
Sbjct: 423 IF-LVFSWFGVLSFVCL-LQTIRLLVWLVRK 449

[Close]

BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT3G13950.1 (AT3G13950.1 unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 67/194 (34.54%), Postives = 110/194 (56.70%), Query Frame = 1


Query: 42  REGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQD 101
           +EG   ++   +W +  K LK +GDWL++ +G LM+ ATVIA ++FQ  +NPPGG WQ D
Sbjct: 6   QEGHRYEESSSEWFV--KYLKRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSD 65

Query: 102 QELTSCRW-KQEGPVHMEIQDVGTAIMACKSLQ--IYTSYFISNSISFFASVSVILLIVS 161
               +C +  Q G         GTA++  +S +   Y    IS+++SF  S+S+ILL++S
Sbjct: 66  ----NCSFGNQTGTAPFCKGRAGTAVLEYESSKRIAYIGMIISSTVSFSTSMSLILLVIS 125

Query: 162 GFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGLVGLVI 221
           G  L+N++   +L   M +AV+ ++ A+     +V  +     Y+L L+ V   +V  V+
Sbjct: 126 GIRLRNRMIMAILGTFMVVAVLCISAAFFFAIVLVQSDDQIIRYIL-LIYVGFWVVFPVL 185

Query: 222 LGCIILPFFI-WLL 232
           +  I L  FI WL+
Sbjct: 186 ILLIQLVRFIGWLI 192

[Close]

BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT4G13266.1 (AT4G13266.1 unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 59/184 (32.07%), Postives = 97/184 (52.72%), Query Frame = 1


Query: 61  LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQ 120
           L ++GDWL++ +G L++ ATVIA ++F   +NPPGG WQ +     C  K +        
Sbjct: 25  LDHQGDWLEKTRGNLVVAATVIAAMSFGVMVNPPGGVWQSE----DCSSKGQTTFQTRTC 84

Query: 121 D--VGTAIMACKSLQ--IYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMT 180
           +  +GT+I+     +   Y    ISN +SF AS+ +I L++ GF  +N++   ++ + M 
Sbjct: 85  EGKLGTSILEHNPSKRIFYLGMVISNLVSFSASMGIIFLVIIGFRFRNRLIMTIMVMFMV 144

Query: 181 IAVVFLTFAYINGTAMV-----FRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIWLL 236
           +AV+ ++ A+     +V     F  K  Q Y    L  W  L  LVIL  I L  F+W +
Sbjct: 145 VAVLCISAAFFFAAGLVQHEDDFIEKILQIY----LGFWVLLPVLVIL--IQLVRFLWWV 198

[Close]

BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT5G50140.1 (AT5G50140.1 Ankyrin repeat family protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.9e-10
Identity = 44/174 (25.29%), Postives = 83/174 (47.70%), Query Frame = 1


Query: 59  KNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHME 118
           K  + + + LQ  + T+ +VA +IA+VTF   +NPPGG +            Q+G    +
Sbjct: 351 KEKEMQSEALQNARNTITVVAVLIASVTFTCGLNPPGGVY------------QDGHFIGK 410

Query: 119 IQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVA---M 178
               GT          +  + +SNSI+ F S+ +++L++S  P + K  +  L +    +
Sbjct: 411 ATAGGTV--------AFKVFSVSNSIALFTSLCIVILLLSIIPFRTKSLKTFLIITHKMI 470

Query: 179 TIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIW 230
            +AV+ +  AY+ GT +   +     ++L    V    +  V+LG + +  F+W
Sbjct: 471 WLAVIAMASAYVAGTCVTLPHSRGNKWVLKATLV----IACVMLGGMFI--FLW 498

[Close]

BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT5G51160.1 (AT5G51160.1 Ankyrin repeat family protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = 1


Query: 45  SSKKKRKGQWQIWKKNLKY-----KGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQ 104
           S+ ++R  + Q  K+ +KY       D   E +  L++VA+++AT TFQ ++ PPGGTWQ
Sbjct: 239 STCQERTMKSQSHKELVKYFTFKKHRDSPSEARSALLVVASLVATATFQASLTPPGGTWQ 298

Query: 105 QDQ-ELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVS 164
                  S         + +    G +IM   +   +T +   N+I F  S+S++ ++  
Sbjct: 299 DSSIPAVSQNTTNVNTTNQQAHTAGQSIMGTFNGVAFTLFVFFNTIGFSVSLSMLNILTL 358

[Close]

BLAST of Cucsa.340880.1 vs. TAIR10
Match: AT1G10340.1 (AT1G10340.1 Ankyrin repeat family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 47  KKKRKGQWQIWKKNLKYKG--DWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQEL 106
           K+ ++ + +  ++NL+Y+   + LQ  + T+ +VA +IA+V + G INPPGG +      
Sbjct: 378 KRSKEQEVERGRQNLEYQMHIEALQNARNTIAIVAVLIASVAYAGGINPPGGVY------ 437

Query: 107 TSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKN 166
                 Q+GP        G +++       +  + I N+I+ F S+ +++L+VS  P K 
Sbjct: 438 ------QDGPWR------GKSLVG--KTTAFKVFAICNNIALFTSLGIVILLVSIIPYKR 497

Query: 167 KIFRWLLTVA---MTIAVVFLTFAYI 188
           K  + LL      M ++V F+  AYI
Sbjct: 498 KPLKRLLVATHRMMWVSVGFMATAYI 503

[Close]

BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|700204659|gb|KGN59792.1| (hypothetical protein Csa_3G846570 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 3.9e-128
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 1


Query: 11  MKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 70
           MK+GKMSMKDAMAAPNV KRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE
Sbjct: 1   MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 60

Query: 71  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 130
           VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK
Sbjct: 61  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 120

Query: 131 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 190
           SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT
Sbjct: 121 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 180

Query: 191 AMVFRNKTAQSYLLDLLRVWDGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 246
           AMVFRNKTAQSYLLDLL VW GLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN
Sbjct: 181 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 235

[Close]

BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|778688967|ref|XP_004141215.2| (PREDICTED: ankyrin repeat-containing protein At3g12360 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 9.8e-116
Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKN 60
           MLEYLLTIQKMK+GKMSMKDAMAAPNV KRSKNWNIQQSKRREGSSKKKRKGQWQIWKKN
Sbjct: 209 MLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKN 268

Query: 61  LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQ 120
           LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQ
Sbjct: 269 LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQ 328

Query: 121 DVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVV 180
           DVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVV
Sbjct: 329 DVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVV 388

Query: 181 FLTFAYINGTAMVFRNKTAQSYLLDLLRVWDGLVG 216
           FLTFAYINGTAMVFRNKTAQSYLLDLL VW GLVG
Sbjct: 389 FLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG 423

[Close]

BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|659128033|ref|XP_008464014.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 90/110 (81.82%), Postives = 96/110 (87.27%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKK-RKGQWQIWKK 60
           MLEYLLTIQKM++GKMS+KD +A P V KRSK  NIQ SKRRE SSKKK RKGQWQIWKK
Sbjct: 214 MLEYLLTIQKMQRGKMSLKDVLAVPKVNKRSKKRNIQISKRREESSKKKKRKGQWQIWKK 273

Query: 61  NLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRW 110
           NLKYKGDW +EVQGTLMLVATVIATVTFQGAINPPGGTWQQDQE+    W
Sbjct: 274 NLKYKGDWQKEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQEVQCVPW 323

[Close]

BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|778670062|ref|XP_011649355.1| (PREDICTED: uncharacterized protein LOC101212496 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 111/270 (41.11%), Postives = 152/270 (56.30%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSS---KKKRKGQWQIW 60
           M+ YLLTI + K      K+ +       +++N   +++KRRE  S   KKK  G W++W
Sbjct: 236 MVGYLLTIPEAKTRTNDTKEKILESQKITKARN---RKTKRRELVSLCTKKKSIGLWKVW 295

Query: 61  KKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWK------- 120
           KK LKYKGDW+QEVQGT+MLVATVIATVTFQG +NPPGG WQQD       +        
Sbjct: 296 KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPPGGVWQQDTPFVYSSFNDATKNCL 355

Query: 121 QEGPVHMEIQDV------------GTAIMACKSLQIYTSYFISNSISFFASVSVILLIVS 180
            E  ++  + D+            GT +M  +  ++Y+ Y   N++SF AS++VIL+IVS
Sbjct: 356 NEFYMNFGLYDLFSYSNTTVLFAAGTGVMKSQQPEVYSIYIWVNTVSFLASMTVILMIVS 415

Query: 181 GFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVF-----RNKTAQSYLLDLLRV--WD 240
            FPLKN+I  WLL  AM IAV+ L   Y+ G  MV        +    Y +  L +  W 
Sbjct: 416 RFPLKNRICSWLLAFAMCIAVLSLAIGYLLGVKMVHLLNFPDGRIFAPYSIFSLTIICWL 475

Query: 241 GLVGLVILGCIILPFFIWLLKKFLRILVVF 242
           G+VGLV L C I    IW++K    + +VF
Sbjct: 476 GVVGLVCL-CFIARILIWMVKTLGVVGLVF 501

[Close]

BLAST of Cucsa.340880.1 vs. NCBI nr
Match: gi|659093595|ref|XP_008447612.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 4.4e-39
Identity = 104/260 (40.00%), Postives = 146/260 (56.15%), Query Frame = 1


Query: 1   MLEYLLTIQKMKKGKMSMKDAMAAPNVTKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKN 60
           M+ YLL I + K     +K+ +       +++N   Q+ +    S+KK+  G+W++W+K 
Sbjct: 231 MVGYLLMIPEAKTRTNDIKEKLLESQKITKTRNRKTQRRESVSLSTKKRPIGRWKVWRKK 290

Query: 61  LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELT-----------SCRW 120
           LKY+GDW+QEVQGT+MLVATVIATVTFQG +NPPGG WQQD                  W
Sbjct: 291 LKYRGDWVQEVQGTMMLVATVIATVTFQGGVNPPGGVWQQDTPFIYSSIINTTKNGFSEW 350

Query: 121 KQEGPVHME----------IQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSG 180
            ++  ++ E          +   GT +M  +   + + Y   N++SF AS+SVIL+IVS 
Sbjct: 351 YKDFGLYEEYSYLRNNTSVLFPAGTGVMRFQQPLLCSLYLWVNTVSFLASMSVILMIVSR 410

Query: 181 FPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMV----FRNKT--AQSYLLDLLRV-WDG 233
           FPLKN+I  WLLT+ M IAVV L   Y+ G  MV    F  K   + S +  L  + W G
Sbjct: 411 FPLKNRICSWLLTLDMCIAVVSLAIGYLLGVKMVNLLTFPEKEDFSNSDVFSLTVICWFG 470

The following BLAST results are available for this feature:

BLAST of Cucsa.340880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGA6_CUCSA	2.7e-128	98.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846570 PE=4 SV=1	[more]
A0A0A0LFQ3_CUCSA	1.8e-36	40.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846590 PE=4 SV=1	[more]
A0A0A0LMQ1_CUCSA	1.2e-35	44.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287040 PE=4 SV=1	[more]
A0A0A0LCQ0_CUCSA	1.0e-31	36.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G847090 PE=4 SV=1	[more]
W9QL39_9ROSA	2.9e-29	37.44	Ankyrin repeat-containing protein OS=Morus notabilis GN=L484_013457 PE=4 SV=1	[more]

BLAST of Cucsa.340880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13950.1	2.6e-21	34.54	unknown protein	[more]
AT4G13266.1	1.0e-17	32.07	unknown protein	[more]
AT5G50140.1	5.9e-10	25.29	Ankyrin repeat family protein	[more]
AT5G51160.1	1.3e-09	29.60	Ankyrin repeat family protein	[more]
AT1G10340.1	1.7e-09	28.77	Ankyrin repeat family protein	[more]

BLAST of Cucsa.340880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204659\|gb\|KGN59792.1\|	3.9e-128	98.30	hypothetical protein Csa_3G846570 [Cucumis sativus]	[more]
gi\|778688967\|ref\|XP_004141215.2\|	9.8e-116	98.14	PREDICTED: ankyrin repeat-containing protein At3g12360 [Cucumis sativus]	[more]
gi\|659128033\|ref\|XP_008464014.1\|	1.1e-42	81.82	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis ...	[more]
gi\|778670062\|ref\|XP_011649355.1\|	2.1e-41	41.11	PREDICTED: uncharacterized protein LOC101212496 [Cucumis sativus]	[more]
gi\|659093595\|ref\|XP_008447612.1\|	4.4e-39	40.00	PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.340880	Cucsa.340880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.340880.1	Cucsa.340880.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.340880.1.CDS.1	Cucsa.340880.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 66..192 score: 9.8
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 16..239 score: 9.8
None	No IPR available	PANTHER	PTHR24177:SF17	SUBFAMILY NOT NAMED	coord: 16..239 score: 9.8