Cucsa.340410.9 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.340410.9
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionWD repeat-containing protein 55
Locationscaffold03356 : 2870959 .. 2875413 (-)
Sequence length1357
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCACTGTTTCTTCTTCCTCTCCCTCTCACTTGCTCCACCTGATTTTCCTCGCCGTCTTCTCCGTCGTCCTAATTGTTGCTGGTATTGTCTCAATCTTCATTTAGGTTTCTTTTATCCCTTGAATGACTCAAACTTCAGCTCATTTGATGAAAAAATGCATGAAGTTTTTATTTGTAGATTATAGTTGGTTTTAATGAGCTTCTAGATTGATTAGAACATCCACCGCTGAATTCTAACAATTCGTTTCATCCGTTGTCTCTCGCTTTCTTTATAAGAAATTCTCTATATATTCTCACCGTGAGTTTTTCGTCTTATACAAATGTTGTTGTGATTTTCATGTCAGATTTTTGTTGTCGAATTATACTCTATATCGGCCTCTCATAGCCACAGCTGTGTCGGTTGCCTTTGAACTTTATAGGCTCCAAACAGGGAGTAACACTCTATTGGTAGTTGGTACAAACTTCCCATTGTGTTGATACGACCAGAGTGTTAGACGTAGGCATGGAAATAAACCTTGCAGACATTCCTTTCGACTTGGACTTCCATCCATCCGATCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTTCACTTGTACTTTCCCTTTCATGTTTCTATTTTATCTGATTTCATTTGCGTTTCTTCAATCACTTATCAAATTCTACGTTCGTCTTTGCAGGTACCGTTATGATGCAAATGCTTTACCCCAAAAGTATGGTAACCGTTGGTCTTCTTACCCCCATATGCACCTTGCACAAATTTATTTGAACTCCTGTAACCTACAGTATAAATAGTTTTCTTTTTTTAACAAGAGAGAACTTTTCATCTTGCACAAGTTTATTTGAACTCCTCTAACCTACAGTATAAGTAGTTTATCCTATACTCATGCTCGTTTGAACTTTTCTGTCTATCTTAGGCTTTTTAAAGTTCGAGCGCATGCCAAATCTTGCAGAGCTGTTAGATTCATCAATGACGGACGTGGTATAGCTTTTTTTATTTTGCTTGCTTATTTTTTTTTTTTTTTTGTTCTTCCTTTGGCAAGAAATTATTGGTGTTTTTGACCTTTAAATGATTGGGTTGTTGTCTGCATAACAGCAATTTTGACTGGTTCCTCAGACCATTCCATTCTCTCTACAGACGTGGAGACTGGTTCTGTTATTGCCCGTCTTGAAGATGCACATGAGTATATTCCTTTCCTTCTGTTTTCATTTTGTCCATTTTCACGCATATGCAATGAAATATAAGATTGAGTAATATGTGATAGTCCACTTTGTTCTACAGTGAAGCAGTCAGTAAACTGATCAACATAACCTCGGAAACGATTGCTTCAGGGGATGACAATGGTGCCATCAAGGTTCTTTTCTTGTCACTGTCTTTTCTGTTTTCTAATTTTATGTTTCCTCTATGCTTTGGAGATTTAATGGATATGGAAAGTCTGCTAAATTAAAGACTGATGTATCTTTCAAGGTATGGGATACCAGACAACGTTCTTGCTGCAGTTCTTTCAAAGCCCATGAAGATTATATTTCAGATATGACCTATTTATCTGATTCCACGAAGCTTTTGGCAACAAGGTAATCCTTGCAGTAATTACTATTTCATTTCAGTTTTATAATCTTAAATTCTAGAAGATTTCTGAGTTTTGTTAAACTTGAATCATTTTTCAGTAGACCCTAGACTGAAGTATGGTTAGTGTTGAGGCACACGCCTTGGCGCTGTCCTTGTGCCTTTCTTCAAAGTGAGACTCCCTTAATGGAGCCAAAGTGTGTTAAAGTTGTGGGCCTTAGCAATCAATTTCTTTCTTTTTCTCTCTTTAAATTAGAAAGTCATGAATGTTCTTAAAAAATATTTCTCTTTTCCTGAAAGCTCTACTCTTTACACTTTTATATCTTTGATTCGTAGTACTATTTTTCTTCGCACGTATATAAATTATGTATATTTTCTGTTGTGTGCCCACAGGTAATGTTTTTTAGTGCCTCAGACTTAGGCCTTGTAGGGCTGTTGTGGTTTAGTGCACCTCTAAGTTTATAAATTGCTGGGTATGACAATGAGTTTGTAATCTCTTTTTCAAATTTCTACTTTTTAATTTATATAGGTTTGAGATCACTTAAAGTTTGGAACAAAAAATGTTGTTTCTTATCTACAAAGTTCTTGTATAAATTTATGAAGATTCAAGAAACGACTTTATGAATTCCTTTTAGTCATCTACTTGATTCTAACCTCTTTCCATTTGAAGAATTTAAATGAGAAATTGGCTGTATCGTGGATTATTTTAACAAATTAGGCCAATAATGTTGTCAAAACTTGCTTCTTTGATTTTATTGCCTTTTTTAACATTTTGTTTTTTGTTTTGGTTTTAAAGTGGAGATGGGTCTCTATCTGTATGGAATCTTAGGAGAAACAAGGTTAGCTATTCCAAGTTTTTATGACGTATTTTGTGTGATTACAATGTGTTAAACAATATCTTTTACTGTTTTCAATTTTTATTTTATGTGCTATTTTGATGCAGATTTAAACTTGCCTTTTCTCTTTAGAAGTTTATTAAAACAGTCTCTTTTGCTTCTCACGTTGATTGGTCCTATTTAAATGCAGCTCCATGCTCGATCTGAGTTTTCAGAAGAAGAGCTACTATCTGTTGTTACAATGAAGGTAGATTTACATATGATAGGGATCAATCATATTCTAGACAAACATTCTGAAAGCTGTTATTTTCATTGCGATGATGTAGATTGTTTAAGCTTTTTTCTTTCTATAGCTTCAGTTCTCTTATGTTCAATTGGAGAAGTTTTTTGTATAATTTCATAAATTGTTTCTTATTTAGAAAAAAAGAAATAAAAAAGGAAGTCATTAGGGGTTGTTGATATCTAATTTCTTATTCCATCTTTTGTAAAAAAATTTAACTTTTTTTTAACTCAGATTCAAATCTGACAAACCAATCTGTTAAAAGTATACTTTGTTATTTTTTAAAATTTTTTTGGGCCTCAATTATTCGGCAACTTTATTTCTCTAATGTAAAGATTAAATGCAAGCAAAGAATTCTTGCTCTTTTTATTATTTTTATCCCCCCTAATTTGAAGTATTCTCACTTCCTCATCGCCCCTCCACATTTTCCCCAAGGAGATTAAAGAGGGGAAAATTAATTTTAAAAAATTCTTCAAAACTTCTTGTTTTGGGGAAGTATCTGAACTGCCACGAAGAATTTGCTAACTGAGTGCGAATAAACATTTATTCCCCATTTCATAAATAACATGTTATTTTAACTTTCTCACTTTTTCTTATTTCTTTTATGGTTTTTTTTTTGTATGTGGTCAGAATGGACGTAAAGTCATCTGTGGATCACAAAATGGAACTCTTTTATTGTATTCATGGGGTTTCTTCCAGGACTGCAGGTGTACATATATGTTTTTTTCTTGAATATGTTTGATGTATTGCTCTGGTCGTTTTAATGAAATCAGGAATTCATTATTGTGATTGGATGTATTAATTATATTGGTGACAATTTCCTTTTTTTTTATTGATTTGTTCCTCATTTCTTTTTGTTTTAACTTTATTCTTCTTCAGTGATCGCTTTGTTGATGCCTCTCAAAATCCTGTGAATGCATTGCTAAAGGTAAGAGCTTGTGGAACGTCTATTAGTATTGTCATTTTTTAATATCTTTTAGGAAATTTTCAGTTACCGCACCAGTTTTTTCCTTCCTTTTAGCTTGATGAAGACCGGGTCATTGTTGCATCTGAGAGTGGACTCATCAGGTGAGGATTTGATAAGTAGATGCTATCCTGTTTTGATCCACATACAGAAGATCATGTGTTTTTATCTTCCCTGTATTTTAGCTCACTTATTTGTGTGTTATTTTCACTAGTCTGGTAGGTATATTGCCCAATAGAGTAATTCAACCAATTGCAGAACACTCTGACTACCCTGTGGAGCGTCTTGGTAAGATATTTTTCCGTTTTGGCTGATATTAAGTAACCAACCTGCATTCATTTTATCAATGAGTTGAGGACCTGAGTTTCTTTGACTGTTAATTCAGCATATCATTTGAGCTCTTTTTGATCTGCAACACTTAATTAGCTACTTTTCTTTAGTTTGTTTTTCTATTGATGTTTAGAATAACATTTTGACAATTTTGTCTTGTTTTGTAGCTTTCTCTCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGATAAAGGTAAGTCCCCACTCCAACTTTTTTGGTCAGCTCATTTTATGCTTAATCCCTATTGAACTATTAATCTAAACCATCATAGGCTGACCTATTGATAAAAAAGGAACCATAGTCTCAATAAATGACTAAGAAGTCATAGGTTCAATCCATGATGGGTTGTCCACTGAGATTACTTGAGGTGTGTGTAAGCTGGCCAAGACACTCACTGGTATCAAAAAAAAGAAAAAAAGAAGGAAGATACTAACCAGACAGGAA

mRNA sequence

TGGCACTGTTTCTTCTTCCTCTCCCTCTCACTTGCTCCACCTGATTTTCCTCGCCGTCTTCTCCGTCGTCCTAATTGTTGCTGATTTTTGTTGTCGAATTATACTCTATATCGGCCTCTCATAGCCACAGCTGTGTCGGTTGCCTTTGAACTTTATAGGCTCCAAACAGGGAGTAACACTCTATTGGTAGTTGGTACAAACTTCCCATTGTGTTGATACGACCAGAGTGTTAGACGTAGGCATGGAAATAAACCTTGCAGACATTCCTTTCGACTTGGACTTCCATCCATCCGATCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTTCACTTGTACCGTTATGATGCAAATGCTTTACCCCAAAAGCTTTTTAAAGTTCGAGCGCATGCCAAATCTTGCAGAGCTGTTAGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCCTCAGACCATTCCATTCTCTCTACAGACGTGGAGACTGGTTCTGTTATTGCCCGTCTTGAAGATGCACATGATGAAGCAGTCAGTAAACTGATCAACATAACCTCGGAAACGATTGCTTCAGGGGATGACAATGGTGCCATCAAGGTATGGGATACCAGACAACGTTCTTGCTGCAGTTCTTTCAAAGCCCATGAAGATTATATTTCAGATATGACCTATTTATCTGATTCCACGAAGCTTTTGGCAACAAGTGGAGATGGGTCTCTATCTGTATGGAATCTTAGGAGAAACAAGCTCCATGCTCGATCTGAGTTTTCAGAAGAAGAGCTACTATCTGTTGTTACAATGAAGAATGGACGTAAAGTCATCTGTGGATCACAAAATGGAACTCTTTTATTGTATTCATGGGGTTTCTTCCAGGACTGCAGTGATCGCTTTGTTGATGCCTCTCAAAATCCTGTGAATGCATTGCTAAAGCTTGATGAAGACCGGGTCATTGTTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGTATATTGCCCAATAGAGTAATTCAACCAATTGCAGAACACTCTGACTACCCTGTGGAGCGTCTTGCTTTCTCTCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGATAAAGGTAAGTCCCCACTCCAACTTTTTTGGTCAGCTCATTTTATGCTTAATCCCTATTGAACTATTAATCTAAACCAtcataggctgacctattgataaaaaaggaaccatagtctcaataaatgactaagaagtcataggttcaatccatgatgggttgtccactgagattacttgaggtgtgtgtaagctggccaagacactcactggtatcaaaaaaaaGAAAAAAAGAAGGAAGATACTAACCAGACAGGAA

Coding sequence (CDS)

ATGGAAATAAACCTTGCAGACATTCCTTTCGACTTGGACTTCCATCCATCCGATCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTTCACTTGTACCGTTATGATGCAAATGCTTTACCCCAAAAGCTTTTTAAAGTTCGAGCGCATGCCAAATCTTGCAGAGCTGTTAGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCCTCAGACCATTCCATTCTCTCTACAGACGTGGAGACTGGTTCTGTTATTGCCCGTCTTGAAGATGCACATGATGAAGCAGTCAGTAAACTGATCAACATAACCTCGGAAACGATTGCTTCAGGGGATGACAATGGTGCCATCAAGGTATGGGATACCAGACAACGTTCTTGCTGCAGTTCTTTCAAAGCCCATGAAGATTATATTTCAGATATGACCTATTTATCTGATTCCACGAAGCTTTTGGCAACAAGTGGAGATGGGTCTCTATCTGTATGGAATCTTAGGAGAAACAAGCTCCATGCTCGATCTGAGTTTTCAGAAGAAGAGCTACTATCTGTTGTTACAATGAAGAATGGACGTAAAGTCATCTGTGGATCACAAAATGGAACTCTTTTATTGTATTCATGGGGTTTCTTCCAGGACTGCAGTGATCGCTTTGTTGATGCCTCTCAAAATCCTGTGAATGCATTGCTAAAGCTTGATGAAGACCGGGTCATTGTTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGTATATTGCCCAATAGAGTAATTCAACCAATTGCAGAACACTCTGACTACCCTGTGGAGCGTCTTGCTTTCTCTCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGATAAAGGTAAGTCCCCACTCCAACTTTTTTGGTCAGCTCATTTTATGCTTAATCCCTATTGAACTATTAATCTAA

Protein sequence

MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKVSPHSNFFGQLILCLIPIELLI*
Homology
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BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match: WDR55_ARATH (WD repeat-containing protein 55 OS=Arabidopsis thaliana GN=WDR55 PE=1 SV=2)

HSP 1 Score: 398.7 bits (1023), Expect = 6.0e-110
Identity = 195/289 (67.47%), Postives = 240/289 (83.04%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L    F +DFHPS  LVAAG+I G+LHLYRYD+++   +  KVRAH +SCRAVRFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           +DG+ I+T S+D SIL+TDVETG+ +A LE+AH++AV+ LIN+T  TIASGDD G +K+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSC   F AHEDYIS MT+ SDS KL+ TSGDG+LSV NLR +K+ ++SEFSE+EL
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKVICG+QNGTLLLYSWGFF+DCSDRFVD + N V+ALLKLDEDR+I   +
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+K+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKL 288

[Close]
BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match: WDR55_DICDI (WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum GN=wdr55 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-55
Identity = 111/295 (37.63%), Postives = 182/295 (61.69%), Query Frame = 1 

Query: 2   EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFIN 61
           +I+   IPF L+FHP++ L+      G L L++Y  +    KL  +R H   CR   F +
Sbjct: 15  DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLDENEVKL-SLRPHQSGCRQANFSS 74

Query: 62  DGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWD 121
           DG+ I T SSD S+   D+ TGS++   E+AHD  ++ L++     + +GDD G IKVWD
Sbjct: 75  DGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIKVWD 134

Query: 122 TRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELL 181
            RQ++    F+ H D+ISD+T + D   + ATSGDG +S++N  R  +   SE S+ ELL
Sbjct: 135 MRQQNIVCEFQEHGDFISDITTIDDR-HIAATSGDGGVSIYNFVRKSMDDISEKSDNELL 194

Query: 182 SVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASES 241
           S +++ NG+K++CGSQ+G++L+Y     ++   +F    Q+ V+AL+K++ +     S  
Sbjct: 195 SCLSLDNGQKLVCGSQDGSILIYDRNNLENVK-KFAGHPQS-VDALVKVNNNTFFSGSSD 254

Query: 242 GLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKVSPHSNFF 297
           G+I  +G+ P +++  + EHS +P+ER+A S D ++LGSISHD+ +K    ++F+
Sbjct: 255 GIIRFIGLRPKKLLGVVGEHSTFPIERMAISRDNRYLGSISHDFSLKFWNVASFY 304

[Close]
BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match: WDR55_DANRE (WD repeat-containing protein 55 OS=Danio rerio GN=wdr55 PE=2 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 2.8e-51
Identity = 109/288 (37.85%), Postives = 163/288 (56.60%), Query Frame = 1 

Query: 2   EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQK-LFKVRAHAKSCRAVRFI 61
           +I L  I   + FHP   ++AAG I G+++L+ Y       K L+    H KSCR V F 
Sbjct: 31  DIKLEAIVNTIAFHPKQDILAAGDIDGDIYLFSYSCTEGENKELWSSGHHLKSCRKVLFS 90

Query: 62  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 121
           +DG+ + + S D +I   DVE G +  R+  AH   ++ ++ I     A+GDD G +KVW
Sbjct: 91  SDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKVPINAMLLIDENIFATGDDEGTLKVW 150

Query: 122 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 181
           D R+ +     K HEDYISD+T       LL +SGDG+L V+N++R +    SE    +L
Sbjct: 151 DMRKGTSFMDLKHHEDYISDITIDQAKRTLLTSSGDGTLGVFNIKRRRFELLSEIQNGDL 210

Query: 182 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 241
            SV  MK GRKV+CGS  GT+ +++W  F   SDRF   +++ V+ ++ + +  +  AS 
Sbjct: 211 TSVSIMKRGRKVVCGSGEGTIYIFNWNGFGATSDRFAVQAES-VDCIVPITDSILCAAST 270

Query: 242 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIK 289
            G+I  + ILPNRV+  I +H    +E +A   D  FL S +HD +IK
Sbjct: 271 DGVIRAINILPNRVVGSIGQHVGEAIEEIARCRDTHFLASCAHDELIK 317

[Close]
BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match: WDR55_ORYLA (WD repeat-containing protein 55 OS=Oryzias latipes GN=wdr55 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.7e-51
Identity = 107/294 (36.39%), Postives = 166/294 (56.46%), Query Frame = 1 

Query: 2   EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDAN-ALPQKLFKVRAHAKSCRAVRFI 61
           +I L  I   +  HPS  ++  G + G+++ Y Y       ++L+    H KSCR VRF 
Sbjct: 50  DIRLEAIANTVALHPSRDVLVCGDVDGDVYAYAYSCTEGETRELWSSGHHLKSCRQVRFS 109

Query: 62  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 121
            DG  + + S D ++   DVE G +++R+  AH  A++ L+ +    +A+GDD G +KVW
Sbjct: 110 ADGLKLYSVSRDKAVHQLDVERGQLVSRIRGAHAAAINSLLLVDENILATGDDRGTLKVW 169

Query: 122 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 181
           D R+       K H+DYISD+        LL TSGDG++ V+N++R +    SEF   +L
Sbjct: 170 DMRKGEAFMDLKHHDDYISDIAVDQAKRILLTTSGDGTMGVFNIKRRRFELLSEFQSGDL 229

Query: 182 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 241
            SV  MK G+KV+CGS  GT+ +++W  F   SDRF   +++ V+ ++ + +  +  AS 
Sbjct: 230 TSVALMKRGKKVVCGSSEGTVYIFNWNGFGATSDRFAVKAES-VDCIVPITDSIMCTASM 289

Query: 242 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKVSPHSN 295
            G I  + +LPNRVI  I +H   P+E +  S D +FL S +HD +IK    SN
Sbjct: 290 DGYIRAINLLPNRVIGCIGQHVGEPIEEINKSWDSRFLVSCAHDQLIKFWEISN 342

[Close]
BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match: WDR55_BOVIN (WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.3e-51
Identity = 108/278 (38.85%), Postives = 158/278 (56.83%), Query Frame = 1 

Query: 12  LDFHPSDQLVAAGVIGGNLHLYRYDANALPQK-LFKVRAHAKSCRAVRFINDGRAILTGS 71
           L FHP+  L+AAG + G++ ++ Y       K L+    H KSCRAV F  DG+ ++T S
Sbjct: 44  LAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVS 103

Query: 72  SDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSS 131
            D +I   DVE G +  R+  AH   ++ L+ +    +A+GDD G I++WD R+      
Sbjct: 104 KDKAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMD 163

Query: 132 FKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGR 191
            + HE+YI+DM    D   LL  SGDG L V+N++R +    SE    +L SV  MK GR
Sbjct: 164 MRQHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKYGR 223

Query: 192 KVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGIL 251
           KV CGS  GT+ L++W  F   SDRF   +++ ++ ++ + E  +   S  G+I  V IL
Sbjct: 224 KVACGSSEGTIYLFNWDGFGATSDRFALRAES-IDCMVPVTESLLCAGSTDGVIRAVNIL 283

Query: 252 PNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIK 289
           PNRV+  + +H++ PVE LA SH   FL S  HD  +K
Sbjct: 284 PNRVVGSVGQHAEEPVENLALSHCGCFLASSGHDQRLK 320

[Close]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match: A0A068TZQ7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036911001 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 217/289 (75.09%), Postives = 256/289 (88.58%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L  +PFDLDFHPS QLVAAG+I G+L LYRY A++ PQ+  KV AH +SCRAVRFI
Sbjct: 1   MEIDLGKLPFDLDFHPSHQLVAAGLISGDLLLYRYAADSTPQRQLKVGAHTESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           N+GRAI+TGS D SIL+TDVETGS IARLE++H  AV++++N+T  T+ASGDD+G +KVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGSAIARLENSHGAAVNRIVNLTESTVASGDDDGCVKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCC+SF+AHE+YISDMT+ SDS KLLATSGDG+LSV NLR NK+  +SEFSE+EL
Sbjct: 121 DTRQRSCCNSFEAHEEYISDMTFASDSMKLLATSGDGTLSVCNLRSNKIQTQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKVICG+Q GTLLLYSWGFF+DCSDRFVD S N V+ALLKLDEDRVI  SE
Sbjct: 181 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +GLISLVGILPNR+IQPIAEHS+YP+ERLAFS+DRKFLGSISHD ++KV
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSEYPIERLAFSYDRKFLGSISHDQILKV 289

[Close]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match: W9QCM8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007401 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 209/289 (72.32%), Postives = 254/289 (87.89%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEINL  +PFD+DFHPSDQLV+A +I G+  LYRY A++LPQ+L +V AH +SCRA+RFI
Sbjct: 1   MEINLGKLPFDIDFHPSDQLVSAALINGDFLLYRYSADSLPQRLLEVHAHTESCRALRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           ++GRAI+TGS D SIL+TDVETGS IARLEDAH EA++K+INI   TIASGDD G IKVW
Sbjct: 61  DNGRAIVTGSPDQSILATDVETGSPIARLEDAHGEAINKIINIKESTIASGDDGGCIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCC++F AH DY+SDMT+ SDS +LL TSGDG+LSV NLRRNK+ ++SEFSE+EL
Sbjct: 121 DTRQRSCCNTFNAHTDYVSDMTFASDSMRLLGTSGDGTLSVCNLRRNKVQSQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV +KNGRKV+CGSQ GTLLLYSWG+F+DCSDRFVD S N ++ALLKLDEDR+I  SE
Sbjct: 181 LSVVIVKNGRKVVCGSQTGTLLLYSWGYFKDCSDRFVDLSPNSIDALLKLDEDRIITGSE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +GLI+LV ILPNR+IQPIAEHS+YP+ERLAFSHD+KFLGS++HD M+K+
Sbjct: 241 NGLINLVNILPNRIIQPIAEHSEYPIERLAFSHDKKFLGSVAHDQMLKI 289

[Close]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match: B9H339_POPTR (Transducin family protein OS=Populus trichocarpa GN=POPTR_0004s09400g PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-121
Identity = 209/289 (72.32%), Postives = 254/289 (87.89%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L  +PF +DFHPSD LV AG+I G+LHLYR++A++ PQ+L ++ AH+++CRA RFI
Sbjct: 1   MEIDLGKVPFTMDFHPSDNLVTAGLITGDLHLYRFNADSSPQRLLEIHAHSEACRAARFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           NDG+AI+TGSSD SIL+TD+ETGS IARLE+AH++A+  LIN+T  TIA+GDD G IKVW
Sbjct: 61  NDGQAIITGSSDRSILATDLETGSPIARLENAHEDAIFSLINLTESTIATGDDQGCIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCC+SF  HEDY+SDMT+ SDS KLL+TSGDG+LSV NLR NK+ ++SEFSEEEL
Sbjct: 121 DTRQRSCCNSFNVHEDYVSDMTFASDSMKLLSTSGDGTLSVCNLRSNKIQSQSEFSEEEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKVICGSQNGTLLLYSWGFF+DCSDRF   S N ++ALLKLDEDRVI  SE
Sbjct: 181 LSVVIMKNGRKVICGSQNGTLLLYSWGFFKDCSDRFTGLSPNSIDALLKLDEDRVITGSE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +GLISL+GILPNR+IQP+AEHS+YP+E LAFSHDRKFLGSISHD ++K+
Sbjct: 241 NGLISLLGILPNRIIQPLAEHSEYPIEHLAFSHDRKFLGSISHDQVLKM 289

[Close]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match: A0A059ATT6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00074 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.0e-121
Identity = 211/297 (71.04%), Postives = 260/297 (87.54%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L ++ FD+DFHPS+QLVA+G+I G+L LYRY   + P+KL +VRAH +SCRAVRFI
Sbjct: 1   MEIDLGNLAFDVDFHPSEQLVASGLITGDLLLYRYGDGSSPEKLLEVRAHGESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           NDG+AILTGS D SIL+TDVETGSV+AR+E+AH+ AV++L+N+T  TIA+GDDNG IKVW
Sbjct: 61  NDGKAILTGSPDCSILATDVETGSVVARVENAHEAAVNRLVNLTESTIATGDDNGCIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCC++F AHED+ISDMT+ SDS KL+ TSGDG+LSV NLR NK+  RSEFSE+EL
Sbjct: 121 DTRQRSCCNTFSAHEDFISDMTFASDSMKLVVTSGDGTLSVCNLRSNKVQTRSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKV+CG+Q+GTLLLYSWGFF+DCSDRFVD S + V+ALLKLDEDR+I  +E
Sbjct: 181 LSVVIMKNGRKVVCGTQSGTLLLYSWGFFKDCSDRFVDLSPSSVDALLKLDEDRIIAGTE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKVSPHSNFFG 298
           +GLISL+GILPNR+IQPIAEHSD+P+ERLAFSHD+KFLGSISHD  +K+   ++  G
Sbjct: 241 NGLISLIGILPNRIIQPIAEHSDHPIERLAFSHDKKFLGSISHDQTLKLWDLNDILG 297

[Close]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match: F6HXL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08160 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.4e-120
Identity = 215/290 (74.14%), Postives = 252/290 (86.90%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHA-KSCRAVRF 60
           MEINL  +PFD+DFHPS+ LVAAG+I G+LHLYRY AN+LPQ+L +V AH  +SCRAVRF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 61  INDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKV 120
           IN+G AI+TGS D SIL+TDVETGS IARLE +H  A+++LIN+T  TIASGDD G IKV
Sbjct: 61  INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 121 WDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEE 180
           WDTRQ+SCC+SF +HE+YISDMT+ SDS KLL  SGDG+LSV NLRRNK+  +SEFSE+E
Sbjct: 121 WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 181 LLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVAS 240
           LLSVV MKNGRKVICG+Q+G LLLYSWG F+DCSDRF+D S N V+ALLKLDEDRVI  S
Sbjct: 181 LLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGS 240

Query: 241 ESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           E+GLISLVGILPNR+IQPIAEHS+YPVERLAFS DRK+LGSISHD M+K+
Sbjct: 241 ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKL 290

[Close]
BLAST of Cucsa.340410.9 vs. TAIR10
Match: AT2G34260.1 (AT2G34260.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-111
Identity = 195/289 (67.47%), Postives = 240/289 (83.04%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L    F +DFHPS  LVAAG+I G+LHLYRYD+++   +  KVRAH +SCRAVRFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           +DG+ I+T S+D SIL+TDVETG+ +A LE+AH++AV+ LIN+T  TIASGDD G +K+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSC   F AHEDYIS MT+ SDS KL+ TSGDG+LSV NLR +K+ ++SEFSE+EL
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKVICG+QNGTLLLYSWGFF+DCSDRFVD + N V+ALLKLDEDR+I   +
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+K+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKL 288

[Close]
BLAST of Cucsa.340410.9 vs. TAIR10
Match: AT2G43770.1 (AT2G43770.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 65/289 (22.49%), Postives = 118/289 (40.83%), Query Frame = 1 

Query: 10  FDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTG 69
           + + F+P+  L+A+G     + L+R   +   +    ++ H  +   + + +DG  I++ 
Sbjct: 57  YTMKFNPAGTLIASGSHDREIFLWRVHGDC--KNFMVLKGHKNAILDLHWTSDGSQIVSA 116

Query: 70  SSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSET------IASGDDNGAIKVWDTR 129
           S D ++ + DVETG  I ++ +      S  +N    T      I SG D+G  K+WD R
Sbjct: 117 SPDKTVRAWDVETGKQIKKMAEH-----SSFVNSCCPTRRGPPLIISGSDDGTAKLWDMR 176

Query: 130 QRSCCSSFKAHEDYISDMTYLSDSTKLLATSG-DGSLSVWNLRRNKLHARSEFSEEELLS 189
           QR    +F   + Y       SD+   + T G D  + VW+LR+ +     E  ++ +  
Sbjct: 177 QRGAIQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 236

Query: 190 VVTMKNGRKVICGSQNGTLLLYSWGFF---QDCSDRFVDASQNPVNALLKL----DEDRV 249
           +    +G  ++    +  L ++    +     C   F     N    LLK     D  +V
Sbjct: 237 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 296

Query: 250 IVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHD 285
              S   ++ +      R I  +  H+   V    F      +GS S D
Sbjct: 297 TAGSSDRMVHIWDTTSRRTIYKLPGHTG-SVNECVFHPTEPIIGSCSSD 335

[Close]
BLAST of Cucsa.340410.9 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12
Identity = 61/281 (21.71%), Postives = 119/281 (42.35%), Query Frame = 1 

Query: 14  FHPSDQLVAAGVIGGNLHLYRYDA--NALPQKLFKVRAHAKSCRAVRFINDGRAILTGSS 73
           F    +L+A+      +  Y  +   + + + + +   H      V F +D R I++ S 
Sbjct: 32  FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASD 91

Query: 74  DHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSF 133
           D ++   DVETGS+I  L    + A     N  S  I SG  +  +++WD     C    
Sbjct: 92  DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL 151

Query: 134 KAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMK-NGR 193
            AH D ++ + +  D + ++++S DG   +W+             E   +S V    NG+
Sbjct: 152 PAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGK 211

Query: 194 KVICGSQNGTLLLY--SWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVG 253
            ++ G+ + TL L+  S   F       V+A     +A    +  R++  SE   + +  
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271

Query: 254 ILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +   +++Q +  H++  V  +A       + S S D  +++
Sbjct: 272 LNSKKLLQKLEGHTE-TVMNVACHPTENLIASGSLDKTVRI 311

[Close]
BLAST of Cucsa.340410.9 vs. TAIR10
Match: AT3G18140.1 (AT3G18140.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-11
Identity = 52/186 (27.96%), Postives = 84/186 (45.16%), Query Frame = 1 

Query: 12  LDFHPSDQLVAAGVIGGNLHLYRYDANA-LPQKLFKVRAHAKSCRAVRFINDGRAILTGS 71
           L+  P    +AA     N H+  +D N+  PQ +    +H  +  AV F  D + + +GS
Sbjct: 41  LEITPDKHYLAAAC---NPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGS 100

Query: 72  SDHSILSTDVETGSVIARLEDAHDEAVSKLINITSET-IASGDDNGAIKVWDTRQRSC-C 131
            D ++   D+         E     AV+ ++   ++T + SGD NG I+VWD R  SC C
Sbjct: 101 EDGTVKIWDLRAPGCQKEYESV--AAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSC 160

Query: 132 SSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKN 191
                 +  +  +T + D T ++A +  G+  VW L R K       +E E L  +   N
Sbjct: 161 ELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGK----QTMTEFEPLHKLQAHN 217

Query: 192 GRKVIC 195
           G  + C
Sbjct: 221 GHILKC 217

[Close]
BLAST of Cucsa.340410.9 vs. TAIR10
Match: AT1G61210.1 (AT1G61210.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 7.5e-10
Identity = 38/159 (23.90%), Postives = 69/159 (43.40%), Query Frame = 1 

Query: 25  VIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGS 84
           + GG+ +     A   P  L  +  H  +  +V F +    +L G+S   I   DVE   
Sbjct: 32  ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91

Query: 85  VIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYL 144
           ++           +   +   E +ASG  +  +K+WD R++ C  ++K H   IS + + 
Sbjct: 92  MVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151

Query: 145 SDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSV 184
            D   +++   D  + VW+L   KL    +F E  + S+
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSL 190

[Close]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match: gi|449446748|ref|XP_004141133.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 574.3 bits (1479), Expect = 1.3e-160
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI
Sbjct: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW
Sbjct: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL
Sbjct: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE
Sbjct: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIK+
Sbjct: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKL 289

[Close]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match: gi|659130028|ref|XP_008464963.1| (PREDICTED: WD repeat-containing protein 55 homolog [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 3.1e-159
Identity = 285/289 (98.62%), Postives = 287/289 (99.31%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAH KSCRAVRFI
Sbjct: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHVKSCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW
Sbjct: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCCSSFKAHEDYISDMTY SDSTKLLATSGDGSLSVWNLRRNK+HARSEFSEEEL
Sbjct: 121 DTRQRSCCSSFKAHEDYISDMTYSSDSTKLLATSGDGSLSVWNLRRNKIHARSEFSEEEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE
Sbjct: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIK+
Sbjct: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKL 289

[Close]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match: gi|778686021|ref|XP_011652318.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 2.9e-141
Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1 

Query: 33  YRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDA 92
           YRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDA
Sbjct: 25  YRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDA 84

Query: 93  HDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLA 152
           HDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLA
Sbjct: 85  HDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLA 144

Query: 153 TSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDC 212
           TSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDC
Sbjct: 145 TSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDC 204

Query: 213 SDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFS 272
           SDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFS
Sbjct: 205 SDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFS 264

Query: 273 HDRKFLGSISHDYMIKV 290
           HDRKFLGSISHDYMIK+
Sbjct: 265 HDRKFLGSISHDYMIKL 281

[Close]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match: gi|720046613|ref|XP_010270559.1| (PREDICTED: WD repeat-containing protein 55 homolog [Nelumbo nucifera])

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-122
Identity = 218/289 (75.43%), Postives = 256/289 (88.58%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEINL  +PFD+DFHPS  LV AG+I G+LHLYRY A++ PQ+L ++ AH++SCRAVRFI
Sbjct: 1   MEINLGKLPFDVDFHPSSSLVTAGLINGDLHLYRYAADSQPQRLLEIHAHSESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           + GRAILTGS D SIL+TDVETGSVIARLEDAH+ AV++L+N+T  TIASGDD+G IKVW
Sbjct: 61  DGGRAILTGSPDCSILATDVETGSVIARLEDAHEAAVNRLVNLTETTIASGDDDGCIKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTR+RSCC+SF AHE+YISDMT+ SDS KLLATSGDG+LSV +LRRNK+  +SEFSE+EL
Sbjct: 121 DTRRRSCCNSFDAHEEYISDMTFASDSMKLLATSGDGTLSVCSLRRNKVLTQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKV+CG+Q GTLLLYSWG F+DCSDRF++   N V+ALLKLDEDRVI  SE
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGHFKDCSDRFINLCPNSVDALLKLDEDRVITGSE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +GLISLVGILPNRVIQPIAEHS+YPVERLAFSHDRKFLGSISHD M+K+
Sbjct: 241 NGLISLVGILPNRVIQPIAEHSEYPVERLAFSHDRKFLGSISHDQMLKL 289

[Close]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match: gi|661894756|emb|CDP01755.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-122
Identity = 217/289 (75.09%), Postives = 256/289 (88.58%), Query Frame = 1 

Query: 1   MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFI 60
           MEI+L  +PFDLDFHPS QLVAAG+I G+L LYRY A++ PQ+  KV AH +SCRAVRFI
Sbjct: 1   MEIDLGKLPFDLDFHPSHQLVAAGLISGDLLLYRYAADSTPQRQLKVGAHTESCRAVRFI 60

Query: 61  NDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVW 120
           N+GRAI+TGS D SIL+TDVETGS IARLE++H  AV++++N+T  T+ASGDD+G +KVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGSAIARLENSHGAAVNRIVNLTESTVASGDDDGCVKVW 120

Query: 121 DTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEEL 180
           DTRQRSCC+SF+AHE+YISDMT+ SDS KLLATSGDG+LSV NLR NK+  +SEFSE+EL
Sbjct: 121 DTRQRSCCNSFEAHEEYISDMTFASDSMKLLATSGDGTLSVCNLRSNKIQTQSEFSEDEL 180

Query: 181 LSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASE 240
           LSVV MKNGRKVICG+Q GTLLLYSWGFF+DCSDRFVD S N V+ALLKLDEDRVI  SE
Sbjct: 181 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 240

Query: 241 SGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKV 290
           +GLISLVGILPNR+IQPIAEHS+YP+ERLAFS+DRKFLGSISHD ++KV
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSEYPIERLAFSYDRKFLGSISHDQILKV 289

The following BLAST results are available for this feature:
BLAST of Cucsa.340410.9 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WDR55_ARATH6.0e-11067.47WD repeat-containing protein 55 OS=Arabidopsis thaliana GN=WDR55 PE=1 SV=2[more]
WDR55_DICDI5.5e-5537.63WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum GN=wdr55 PE=... [more]
WDR55_DANRE2.8e-5137.85WD repeat-containing protein 55 OS=Danio rerio GN=wdr55 PE=2 SV=2[more]
WDR55_ORYLA3.7e-5136.39WD repeat-containing protein 55 OS=Oryzias latipes GN=wdr55 PE=1 SV=1[more]
WDR55_BOVIN6.3e-5138.85WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1[more]
BLAST of Cucsa.340410.9 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A068TZQ7_COFCA1.2e-12275.09Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036911001 PE=4 SV=1[more]
W9QCM8_9ROSA1.1e-12172.32Uncharacterized protein OS=Morus notabilis GN=L484_007401 PE=3 SV=1[more]
B9H339_POPTR1.4e-12172.32Transducin family protein OS=Populus trichocarpa GN=POPTR_0004s09400g PE=4 SV=1[more]
A0A059ATT6_EUCGR4.0e-12171.04Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00074 PE=4 SV=1[more]
F6HXL9_VITVI3.4e-12074.14Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08160 PE=3 SV=... [more]
BLAST of Cucsa.340410.9 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34260.13.4e-11167.47 transducin family protein / WD-40 repeat family protein[more]
AT2G43770.11.9e-1322.49 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.11.2e-1221.71 Transducin/WD40 repeat-like superfamily protein[more]
AT3G18140.14.0e-1127.96 Transducin/WD40 repeat-like superfamily protein[more]
AT1G61210.17.5e-1023.90 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Cucsa.340410.9 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446748|ref|XP_004141133.1|1.3e-16099.65PREDICTED: WD repeat-containing protein 55 homolog isoform X1 [Cucumis sativus][more]
gi|659130028|ref|XP_008464963.1|3.1e-15998.62PREDICTED: WD repeat-containing protein 55 homolog [Cucumis melo][more]
gi|778686021|ref|XP_011652318.1|2.9e-14199.61PREDICTED: WD repeat-containing protein 55 homolog isoform X2 [Cucumis sativus][more]
gi|720046613|ref|XP_010270559.1|1.1e-12275.43PREDICTED: WD repeat-containing protein 55 homolog [Nelumbo nucifera][more]
gi|661894756|emb|CDP01755.1|1.8e-12275.09unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR024977Apc4_WD40_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009960 endosperm development
biological_process GO:0010197 polar nucleus fusion
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.340410Cucsa.340410gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.340410.9Cucsa.340410.9-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.340410.9.CDS.13Cucsa.340410.9.CDS.13CDS
Cucsa.340410.9.CDS.12Cucsa.340410.9.CDS.12CDS
Cucsa.340410.9.CDS.11Cucsa.340410.9.CDS.11CDS
Cucsa.340410.9.CDS.10Cucsa.340410.9.CDS.10CDS
Cucsa.340410.9.CDS.9Cucsa.340410.9.CDS.9CDS
Cucsa.340410.9.CDS.8Cucsa.340410.9.CDS.8CDS
Cucsa.340410.9.CDS.7Cucsa.340410.9.CDS.7CDS
Cucsa.340410.9.CDS.6Cucsa.340410.9.CDS.6CDS
Cucsa.340410.9.CDS.5Cucsa.340410.9.CDS.5CDS
Cucsa.340410.9.CDS.4Cucsa.340410.9.CDS.4CDS
Cucsa.340410.9.CDS.3Cucsa.340410.9.CDS.3CDS
Cucsa.340410.9.CDS.2Cucsa.340410.9.CDS.2CDS
Cucsa.340410.9.CDS.1Cucsa.340410.9.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.340410.9.three_prime_UTR.1Cucsa.340410.9.three_prime_UTR.1three_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.340410.9.five_prime_UTR.2Cucsa.340410.9.five_prime_UTR.2five_prime_UTR
Cucsa.340410.9.five_prime_UTR.1Cucsa.340410.9.five_prime_UTR.1five_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 126..163
score: 0.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 82..121
score: 0.14coord: 251..291
score: 3.1coord: 124..163
score: 3.0E-6coord: 166..205
score: 13.0coord: 40..79
score: 0.23coord: 1..34
score: 4
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 47..88
score: 8.604coord: 131..172
score: 12
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 11..289
score: 2.2
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 47..205
score: 2
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 7..289
score: 2.68
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 108..122
score: -coord: 150..164
scor
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 14..100
score: 1.
NoneNo IPR availablePANTHERPTHR22840FAMILY NOT NAMEDcoord: 2..289
score: 5.7E