Cucsa.337220.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTCTTCTATCACTCTATATTTCCTCCTCCTTCCCATCCCCTCTTCCGCCTCACCGCACTTTCAGCTCCATTTCCCCCCATGGCTCCACCCTCCAAAGCTCTCCAAGAACCACGAACAGTCGAAGAATAACCACGATACCCCTCTCCTTTCGTACCTCCTACCGATTCACCGCTGACCACGAAGACGGAGATGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGGCTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTCAATCGGGTTTGTGATTTCATAATCTCTATTTTCGTTTGGTGGTATCATATCGTTGCTGTGTGTTTGTTTGAATTTGTTTCTGGGTTAGAATCATAGAGGGGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCCGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACTGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGAGTTCTTCTTTTTCTCCATTACAACTCCAATTTTTGCTCTGAAACTTTTTAGTGCTCTTCTGGAACAGAGATTGCTTTCGTAATTCCATTCTTGTTTTTAGTGTATAAACTTTGAAAGGACAAACTTGCTTGCTGATTTAATAATTCAACTTTCTTCTTGTTGTGTCATGTTTTCAAACTTTGAGAGATTTGAGAAGTGGATGATTTACTTTCCATCGGAACTTTTTTTTTATTTTTATTAAACCTATTTTCTTATAAATTTTACAAAGGGCATATATCATTTTTTAAGTATTAAGAGTTAAAATTTAACAAAATTCCAAAAACAAAACAAGTTTTAATTTAATCTTTTTTTTTGGTCAGCTTTTAAAATTTTGACTTGATTTTAAAAACACTTGAAAAAGATAGCCACATCTAACCTTAGTATTCATACCAAATGATTATCAAATGTAAACTTAAACGTGGAACTTGGGTATGTTTCAAGGACTATATTGAACTAGGAATTGCACTTTTACGTGTTCTTTCCTAGTTAACATTGTTTATTAAATGATATGATGTGGGAAAATCTATAGAATAAATGAATTTGAAGTGACCTATAAATAATGAAAAAGAAAATGTTAATAAAATTTGTTGCGCTTGAATTTTCATTGTTTACCTTTAGAAAAATTAAGGTATTGCACATTCTTTATAAGACAAATGAGTTACTCTTTTCGTTGTCACTTGACTTTGAGATGAAACTCTATAAATTTAATACAACGAATTAACTATTTAATCTCCGGAAGAGTTATAGAGTTAAGAAATCCTTTGACTAAGGCCGTCTTTAAAAGTTCATAACTAAGGTCGGGTTGGTAACTGTTTTGCTCTTTAAAATTAACCCCATAAACACTAGTAACCTCTAAATTTATTCCATTGTTATATGCTTAGCAACGGTTTAAAAAACCAAGCTAAAATCTGAATACTAAAAAAAAAAGGTAGATCTTAGAAACTTGTTTTTGTTTTTAGAATTTGGCTAAGTATGCATGCAACTTTTTACTTAAAATTGATACAAAAACCATGTAAGGAAGTATAAGTTTATAATCTAAATTTTTAACTTTAAACTACTTGTCCTTGATACTGAAACAAATATGAATGGATGAAATAACATAATGAAATGAAATGATTATTTTGGATATGAAACAGGTGATGAGAGTGTATGTGTCACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATGGAGAAACAAGTTGATGGAAGTACGTGCATTGTTTTTTCTTCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCACTCTTGATGCTACCAAACAACACCTTTTAGCCCTTGATTCCCATTGATATTACTTGTCATTTTCTTTTACAAGCATTCAGGAGATACAAGAAATATCTCACTTTA ATGGCTTCTCTTCTATCACTCTATATTTCCTCCTCCTTCCCATCCCCTCTTCCGCCTCACCGCACTTTCAGCTCCATTTCCCCCCATGGCTCCACCCTCCAAAGCTCTCCAAGAACCACGAACAGTCGAAGAATAACCACGATACCCCTCTCCTTTCGTACCTCCTACCGATTCACCGCTGACCACGAAGACGGAGATGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGGCTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTCAATCGGAATCATAGAGGGGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCCGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACTGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGATGAGAGTGTATGTGTCACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATGGAGAAACAAGTTGATGGAAGTACGTGCATTGTTTTTTCTTCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCACTCTTGATGCTACCAAACAACACCTTTTAGCCCTTGATTCCCATTGATATTACTTGTCATTTTCTTTTACAAGCATTCAGGAGATACAAGAAATATCTCACTTTA ATGGCTTCTCTTCTATCACTCTATATTTCCTCCTCCTTCCCATCCCCTCTTCCGCCTCACCGCACTTTCAGCTCCATTTCCCCCCATGGCTCCACCCTCCAAAGCTCTCCAAGAACCACGAACAGTCGAAGAATAACCACGATACCCCTCTCCTTTCGTACCTCCTACCGATTCACCGCTGACCACGAAGACGGAGATGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGGCTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTCAATCGGAATCATAGAGGGGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCCGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACTGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGATGAGAGTGTATGTGTCACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATGGAGAAACAAGTTGATGGAAGTACGTGCATTGTTTTTTCTTCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCACTCTTGATGCTACCAAACAACACCTTTTAGCCCTTGATTCCCATTGA MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLHHLFNRNHRGAMMELGEGVCKLRKMEFPSGPFRTFEREITAVLDFVYLTQIELAACDESVCVTMEGSERSYELLGRYGEGQKLYDMEKQVDGSTCIVFSSQTSQTHPLRVKLPTLDATKQHLLALDSH*
BLAST of Cucsa.337220.1 vs. TrEMBL
Match: A0A0A0LC38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815420 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 2.4e-140 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. TrEMBL
Match: M5VTN3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024779mg PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 5.6e-65 Identity = 143/251 (56.97%), Postives = 172/251 (68.53%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. TrEMBL
Match: A0A151TAG5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_018635 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 9.5e-65 Identity = 138/244 (56.56%), Postives = 169/244 (69.26%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. TrEMBL
Match: D7LGJ3_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483180 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.8e-64 Identity = 133/247 (53.85%), Postives = 167/247 (67.61%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. TrEMBL
Match: V7CYD0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G109000g PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.7e-64 Identity = 130/223 (58.30%), Postives = 158/223 (70.85%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. TAIR10
Match: AT2G41120.1 (AT2G41120.1 unknown protein) HSP 1 Score: 246.1 bits (627), Expect = 2.2e-65 Identity = 131/247 (53.04%), Postives = 165/247 (66.80%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. NCBI nr
Match: gi|449437650|ref|XP_004136604.1| (PREDICTED: uncharacterized protein LOC101210744 [Cucumis sativus]) HSP 1 Score: 506.1 bits (1302), Expect = 3.4e-140 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. NCBI nr
Match: gi|659084965|ref|XP_008443170.1| (PREDICTED: uncharacterized protein LOC103486836 [Cucumis melo]) HSP 1 Score: 463.4 bits (1191), Expect = 2.5e-127 Identity = 230/249 (92.37%), Postives = 235/249 (94.38%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. NCBI nr
Match: gi|595812979|ref|XP_007203505.1| (hypothetical protein PRUPE_ppa024779mg [Prunus persica]) HSP 1 Score: 255.8 bits (652), Expect = 8.0e-65 Identity = 143/251 (56.97%), Postives = 172/251 (68.53%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. NCBI nr
Match: gi|1012352860|gb|KYP64048.1| (hypothetical protein KK1_018635 [Cajanus cajan]) HSP 1 Score: 255.0 bits (650), Expect = 1.4e-64 Identity = 138/244 (56.56%), Postives = 169/244 (69.26%), Query Frame = 1
BLAST of Cucsa.337220.1 vs. NCBI nr
Match: gi|297827749|ref|XP_002881757.1| (hypothetical protein ARALYDRAFT_483180 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 253.4 bits (646), Expect = 4.0e-64 Identity = 133/247 (53.85%), Postives = 167/247 (67.61%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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