Cucsa.327620.3 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGGCATCTCCCCCTCCATTCCGATCATTTCCATCGACGTTGTGTGTTTTTTTTTTGTGAGGTTGTAGTTCGCGTTCCTGTTCTCCTATTGCTCTTGATTCTACCTCAAGGTAAGGTTGACGTATTAAGCGTTTGCCCCTTTCATTTTGTTCTTCGAATTCATTTGCGGATTCACTACACTGATTGCATACCGGAACATGTGTCTTTCATTAGGGTTTTGGTATCGACCTATTTTATTGGTTGAAGTTGTCTTGCATTTTGATGAATTCACGGATCTGTTTTGATTTGTTACTTAGATTTCGATTGTATGATTCCATTTTTTATGGTCGAGGAGTTTTAGCGTCTCTTTATGTCAAATCGATTGGAGGGTGTATTTGTTTTTTGAGTGAAGTTGAACTTGCTCATTCATCGTCACTGCTAGGGGTGTTTCTTTGGGTTTTTTTTTTTTTTTTGTCTTGTTGTATGGATAACTTATTTGTAAGACGAACCGTGTACTTAAGCTTGATATTTGATCCACAACAGGAGTTGAAATATGAAGCTTGATACCAGTGGTCTTCAAACAACCGCCCCGCTGTTTGGGCCAACAATGGAGGCTATGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCAGTGACGTAATTTGTAAATCATTTCTCATACTGCTTTCTGGGGTGGATGCTTCTCTTTAGAATTGCGTTTTCTCACTTTGATATCCTCTGTATTTCAGTTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTTATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCTCGTGCCAGCATGGGAGGCTATATATGTATGTTAACTTTATTACATGTGTTCTTTAACCAAATTTCAGGATTAACTTTTAGACGTGGTTTGGTTTGGGTTTAATTTTCTATTTAGCTTTTTGTCCGTTGCTCCTTCTTCCCACTATCCTCCACTGTATTTAAGTTATTATGTTGTTATTTGAGTACCGTTCTTTGTTCTGAAATAAGTTTTTGTTTTTGATGATTAGCATCACAATCTGTGAAAAAAATTATTGAAATCAATCCTTACATGCTTGGCACTATGGCTGGAGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTTAAGGTAATTGACAAATATTCATTTACTTTTAGAGTTTTGCTCTTACAACGACTCAACTTTCAAATGAGCTTGAGATATCTACCCTTCTCTTTTCAGTTAATCATTTCTTGTGAACGTTGATATTTTGGATTTTTCTTCTGTGCTTAGCTAATCATCTTTTTTAACATGATTTAGTGCCGCCTACACAAGTTAGCAAACAAGCGCCGAATTTCAGTTGCAGGAGCCTCCAAATTACTGGCCAACATTCTGTACTCCTATCGTGGAATGGGTCTATCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGTAATAAATATTTATTTAGTTTTATTTTCTAATTTTAAGTAGTGGCATACATTTTGTTTTGTTTTGATATTTTATTTTGATCGACAACTTTCCTTCTTCTTTGGCATGTTAGGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGGAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCCTATGCCTACGGTGTCTTGGATAATGGGTAAGTGAGATTCTCCATTATCAGGATATATTCAATATTTCTCTCAATTCAGTTATTTTCACAGAACTTCTGATGATACATTAAGATGAACAAATGTAGTTTTGTGAACCACCATGATCTGGCATGACCTCTATTTGGAGCATATAAAAAAACAAGAGAAGAAAAAGGAAAGTGAAATTCATGGTAGCCACCTAATTAGGACATTAATAAAATTTGTAGAGTCTTATGGATACAATATTTTATTTTAGATGGAAAAAAAATGTTAATTGATATAGTGACAATTGCACTTAGGCAGCAAGTACAAGGGGTTGTTTAGGATAGCTTTGAAATTGTTAAAATAAATTGTCATGTCATGTTGAGAATCATTTTAACACCCTAAAACTAAAAGTGGATGGATTCAACACCCCTTCTCTGCACTACCGTTCCATTTAGAAATAGCAGTAGGCCACCAATTAGAATTAGTTCTAAGATCTGGGTATTTTGATTTTTTCTTGGGCTTGAATGGCATAATTCTTTCCTTCTGTCATTTTAATTTAACAATTTGCCTTTCCTCTTGCCTTTTCTTCTCTCATCTCTAGTCAATGGCCCATCTGTCCATCTTTTTTGATCCATGTATATATATATTAATTGATGTTGTGTGACAAAGCAGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGAGCTATTTATCATGCAACTTTCCGAGATGGTGCCAGTGGTGGAGTTGCTAGCGGTATTCCTCGGTCCAAATGTCTCTTGATTGTTTTACCAATTTGTGTGCTTGTGCAAACTCTCTCTGACCCCTTTTTGTTTTGTATACCGTTGATCAGTTTATTACGTGGGACCAAATGGATGGAAAAAGCTATCTGGCGATGACGTAGGAGAACTCCATTACAACTACTATCCTGTGACACCAACTACAGTCGATCAGGAAATGACTGAAGTAACCGCCGCTTGATGATCCGATATAGACTTGGGCAGGTTAAGACAACACTCCCTGTGGATTTGTGTTAGGGAGAGCTGATTCTAAAGAGATGCTTTAAATGTGGTATTTTTAAAGTTAAGCGTTTATAACTCATGGACATAACCGTAGAAAGTTTGATTGGATCTAGGTTTGGAAACTTGTGCTGCAAGGAACTTTGTGTTATGTTATTCTAGTTATATGGCTTCGTTGGAGGACCTTGTCTATGTTTCCTAAATTTTAAATCCATTTCTTCATTGGGACTACCCTCTTTATCATGCTCTTCTGCTTTCCAGTTTAGATTTTGTTATATCAAACGAAACTTTCCGATATTTTCTTTTTGAAAAATGGTCAGGCTTGTGATGGATGTGGG TGCGGCATCTCCCCCTCCATTCCGATCATTTCCATCGACGTTGTGTGTTTTTTTTTTGTGAGGTTGTAGTTCGCGTTCCTGTTCTCCTATTGCTCTTGATTCTACCTCAAGGAGTTGAAATATGAAGCTTGATACCAGTGGTCTTCAAACAACCGCCCCGCTGTTTGGGCCAACAATGGAGGCTATGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCATTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTTATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCTCGTGCCAGCATGGGAGGCTATATATCATCACAATCTGTGAAAAAAATTATTGAAATCAATCCTTACATGCTTGGCACTATGGCTGGAGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTTAAGTGCCGCCTACACAAGTTAGCAAACAAGCGCCGAATTTCAGTTGCAGGAGCCTCCAAATTACTGGCCAACATTCTGTACTCCTATCGTGGAATGGGTCTATCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGGAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCCTATGCCTACGGTGTCTTGGATAATGGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGAGCTATTTATCATGCAACTTTCCGAGATGGTGCCAGTGGTGGAGTTGCTAGCGTTTATTACGTGGGACCAAATGGATGGAAAAAGCTATCTGGCGATGACGTAGGAGAACTCCATTACAACTACTATCCTGTGACACCAACTACAGTCGATCAGGAAATGACTGAAGTAACCGCCGCTTGATGATCCGATATAGACTTGGGCAGGTTAAGACAACACTCCCTGTGGATTTGTGTTAGGGAGAGCTGATTCTAAAGAGATGCTTTAAATGTGGTATTTTTAAAGTTAAGCGTTTATAACTCATGGACATAACCGTAGAAAGTTTGATTGGATCTAGGTTTGGAAACTTGTGCTGCAAGGAACTTTGTGTTATGTTATTCTAGTTATATGGCTTCGTTGGAGGACCTTGTCTATGTTTCCTAAATTTTAAATCCATTTCTTCATTGGGACTACCCTCTTTATCATGCTCTTCTGCTTTCCAGTTTAGATTTTGTTATATCAAACGAAACTTTCCGATATTTTCTTTTTGAAAAATGGTCAGGCTTGTGATGGATGTGGG ATGGTAAAGCCAGCAAAAGGAACAACCACACTGGCTTTTATTTTTAAGGAAGGAGTCATGGTTGCTGCTGATTCTCGTGCCAGCATGGGAGGCTATATATCATCACAATCTGTGAAAAAAATTATTGAAATCAATCCTTACATGCTTGGCACTATGGCTGGAGGTGCTGCTGATTGCCAGTTTTGGCATAGAAACCTCGGTGTTAAGTGCCGCCTACACAAGTTAGCAAACAAGCGCCGAATTTCAGTTGCAGGAGCCTCCAAATTACTGGCCAACATTCTGTACTCCTATCGTGGAATGGGTCTATCTGTTGGGACTATGATTGCTGGATGGGATGAAACAGGTCCTGGTCTATATTACGTAGACAGTGAGGGAGGGAGGCTGAAAGGAACAAGATTTTCTGTTGGATCTGGTTCACCCTATGCCTACGGTGTCTTGGATAATGGATATCGGTATGACTTGTCTGTTGAAGAAGCTGCTGAACTGGCTAGACGAGCTATTTATCATGCAACTTTCCGAGATGGTGCCAGTGGTGGAGTTGCTAGCGTTTATTACGTGGGACCAAATGGATGGAAAAAGCTATCTGGCGATGACGTAGGAGAACTCCATTACAACTACTATCCTGTGACACCAACTACAGTCGATCAGGAAATGACTGAAGTAACCGCCGCTTGA MVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHKLANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYNYYPVTPTTVDQEMTEVTAA*
BLAST of Cucsa.327620.3 vs. Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 5.3e-116 Identity = 199/224 (88.84%), Postives = 214/224 (95.54%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 6.4e-114 Identity = 197/220 (89.55%), Postives = 211/220 (95.91%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 6.4e-114 Identity = 198/223 (88.79%), Postives = 212/223 (95.07%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 289.7 bits (740), Expect = 2.8e-77 Identity = 137/205 (66.83%), Postives = 166/205 (80.98%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 289.7 bits (740), Expect = 2.8e-77 Identity = 137/205 (66.83%), Postives = 166/205 (80.98%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TrEMBL
Match: A0A0A0KDM0_CUCSA (Proteasome subunit beta type OS=Cucumis sativus GN=Csa_6G365720 PE=3 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 2.5e-125 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TrEMBL
Match: A0A151TRD5_CAJCA (Proteasome subunit beta type OS=Cajanus cajan GN=KK1_008769 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TrEMBL
Match: I1KC47_SOYBN (Proteasome subunit beta type OS=Glycine max GN=GLYMA_06G171200 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TrEMBL
Match: I1JXI9_SOYBN (Proteasome subunit beta type OS=Glycine max GN=GLYMA_04G194700 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TrEMBL
Match: A0A0B2QPF9_GLYSO (Proteasome subunit beta type OS=Glycine soja GN=glysoja_040249 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TAIR10
Match: AT3G26340.1 (AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 411.4 bits (1056), Expect = 3.6e-115 Identity = 197/220 (89.55%), Postives = 211/220 (95.91%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TAIR10
Match: AT1G13060.2 (AT1G13060.2 20S proteasome beta subunit E1) HSP 1 Score: 397.9 bits (1021), Expect = 4.2e-111 Identity = 198/247 (80.16%), Postives = 212/247 (85.83%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TAIR10
Match: AT4G31300.2 (AT4G31300.2 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 95.5 bits (236), Expect = 4.4e-20 Identity = 56/185 (30.27%), Postives = 95/185 (51.35%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TAIR10
Match: AT5G40580.1 (AT5G40580.1 20S proteasome beta subunit PBB2) HSP 1 Score: 82.4 bits (202), Expect = 3.9e-16 Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. TAIR10
Match: AT3G27430.2 (AT3G27430.2 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15 Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. NCBI nr
Match: gi|449452891|ref|XP_004144192.1| (PREDICTED: proteasome subunit beta type-5 [Cucumis sativus]) HSP 1 Score: 456.1 bits (1172), Expect = 3.6e-125 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. NCBI nr
Match: gi|659089408|ref|XP_008445492.1| (PREDICTED: proteasome subunit beta type-5 [Cucumis melo]) HSP 1 Score: 452.2 bits (1162), Expect = 5.3e-124 Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. NCBI nr
Match: gi|734402139|gb|KHN31904.1| (Proteasome subunit beta type-5 [Glycine soja]) HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. NCBI nr
Match: gi|356516569|ref|XP_003526966.1| (PREDICTED: proteasome subunit beta type-5 [Glycine max]) HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
BLAST of Cucsa.327620.3 vs. NCBI nr
Match: gi|1012358389|gb|KYP69573.1| (Proteasome subunit beta type-5 [Cajanus cajan]) HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120 Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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