Cucsa.322100.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCTTCTGATTAATGGAGCTCTGTTTTTGTTGAAGCTTTTTTTtGGAGTTTTATTACTTTGAGAACTGGAGGGTTTTCTTAACTTTTTCTTTTGTGTGGCTATTGTTTCTCTTTCTCTGCCATGTTTGATACTTACAAGGATTTTTTTTtATCTTTTTTATTTTATGAAATTGGTTTCAATCTCATGGGTTCAATCTTCTCTTTCACTTTATTCTGATTTATGGAACTTTGTTTCTATTTTTGGCCGTGGCTTCTCTTTCTCTGTCATTTAAAAAAaGAAAATAGAAATTAGAAGGCTTTAGTTATTACTGGGTTCAATCCTCTCTTTTTCCTTTTACTTTTGAATGTTTCATCCGAATGGGATTTTGAAATTTACTGTTGTTTTTGCATTTGTGTTTGAAGATTTTACATTTTTACATCAATTATTTACCACATAGATGATTGAGTGGAAAGTGTAAAGTGAAACAAGAGAAGGGTTAGTTTAATAGTTCCAAAGTTGGTTTCTTTTTCAGGTCATTTTTTtAACCTTCTTTCTTACCTTTTCCCCTGAAAAAAAGCACCCATTTTCTCTCCTCTTTTAGTTGCAAAATGTGATTTTTTTTTCTTTTGATGGAGTTCTGTGAAACTTTTGCTTTTTACTTCCTTTTCCATTCTTCTTTTCTCTCAAGATTTGCTTTCCTTTTCCATATAATATGATTTTTTTCTCTTTTGGAATAAATTTCAATTACTCAACTTTTGTTTTCTAGAAATTTTGTTTTATAAACTTACTGACATTTATGTAATTGTCCTATTTGTTGGTTTACATGTAACAACCATAGTTTTGGTCGAGTAGTCGGAAGAACGAGATGTGCGTTTTTCTGGTTGTTTACTCAGAATATTGAATTCTACTAGTTTCTTGGAGTCGAATGTTGTATGTTATGATCGTTGGACCTTTGAGATAATTAGTCCAAGTGTGCGTAAGTTGCCTTAAGCAGTCATGGTTGTTGCAAAAAAATGTTGCACTAAGACATTATACCATAATCTCGGACCTGTTTTCATTTGCTATGGATTTTGTTGAGCTTTTTTTGGTACTATTTCGATGGATTTGGTTGTTTTCGCCTGTTACATGCTTACATGTTTTCGTATCTAAACTTTTTGTAATCTTTTTATGCAGATACGACTATTCTGGCTATGGAGCTTCAACTGGTAAGGTATGTTGCTGTTTCACTCTACACCCCAATCTGTTGTATTTGACTCTATCATTTAAGTAAACAGTTTATGCCTTAGATTTGACTGTTTGTGAGTTTAGTGTTTAGGGGTTAATCTCTACATTGATTTCAATTTGTTGAAGTTGTGATAAAGTGTTTAAAACCTGTTACAAACAAAATCTAGAAATGAAAGGGTAAGACTTAACATTTCTGCGTCACGTCAAAAAAATTGCGGTTTGACGAGGGCATGAGATTAACCCAAAATACAAGGGCAGTAATCTAGGCTGCTTGTGAATGAAATTTTGATGAATTTGAACTCCTTAGCATTTTATTCGAGCCTTTTGTGACGATGATTCATTGGCGCTCGTTACAAAAAAGGTTGGATCATTGTTAGAAGGCTGAATTAGCTAGCTCTCGTTCAGTTTTTTATCATTGCTCTATGCTGTCTACCAAAAACTTAAATTGCAGTCGCTGTTGGCTAGTTGAATTAACGTTATTTGTGAAATCCAGCCTAGCGAATCGAATACGTATGCTGATATCGAAGCAGTGTACGAGTGCCTTGAAACCGAGTACGGAGTTAGCCAAGAAGATTTGATCTTGTATGGACAGTCTGTTGGAAGTGGACCAACATTGCATTTGGCTTCTAAATTGCCGAGGTTGAGGGGTGTCGTCCTGCATAGCGCGATCCTTTCAGGTCTACGAGTTCTATGTCACGTTAAGTTCACCTTTTGCTTTGATATTTATAAGGTAACATGCCTATCTTCGACATTTATGGATTTGATACTTTCATCTGTGCATTAAGCTTGTGAGTTCTCTCTTTTCTTGCAGAACATTAATAAAATTAAGAAGGTGAAGTGTCCTGTGCTTGTAATACATGTAAGTTCATTCTCTCATTCTCTCTTTTGGATATCTTTCATGAATATACTAGGAAATTAACTTAAACATAAAGCAATTAACAACATTTTTCACTTTGCTTCAACTCGAACTTGTTCCCAGTGGTTTCGAACCGGATGTTTGATTAGATTGTCGGGTGCGTTTCGGCGTACGTGAATATATGTATGGATAACTATTCCTTTTCCTGTCACTTAATCACTGACTTTGTGGTAACATATCATAAAATGGCTCTAATTACCCAATCAATTGTTGTATCAATGTCGATGAGTTTCATCTAGGATGTAAGAATGGAGTTTTTGGATTCCACCATCCAATTGCTGTATAAATTTGTGACTTTTGATGTTTTCGAATGTAATTCGCAGGGCACCGAAGATGATGTTGTCAATTGGCTCCATGGAAATGGATTATGGAAAATGTCGAGAGAACCATACGACCCTCTATGGATAAAAGGAGGAGGACACTGCAACTTAGAACTTTATCCTGACTATATCCGCCATCTTTGCAAGTTCATTCACGAAATGGAGAACATAACCACAAAAATTCGCCTTAAAAGAATTCGACAAACTCTTGACCTGCAAAAAAGATCCTGTTGTTGTTCAGTTTCTTGTCATGGATGGTGCTGCAAAGTCAAATGTTGGCAACCAAAATGCTCGAGACCAAGCTGTGCGAGTTGCTGCTCAGTACGGTTGAAATGTCCTGCATCCTGTAAACCTAGATGCCCGAAATGCCCGACGCTGAGGTGCTGCTTCAGCTGCCCGTCCACTAATTGCTTTAGTTGGAAATGCTGCTGCTGCACTAGTTGTTTGCAATGGAGATGCAGCAGTGACTGTTGTTGTAGCAGCTGTTTTCAATGGAGCTGCTGTTGTGAAAGAAGGTCGTCCAATGAGTGAGAAAAGGGAAGGATTTTTCAATGGTGGGTTTGTATAGAATGCTTTGCTTTTATTAACACCCCTTTCTAAAATTGTGCAGTAGCTTTATAGAACAAGAGGAAGAGAGTATTTTTATCAGATAAATTCTTTGGGGGgAAGAAGATTTTATTTAATTATATTATTCCTTTCAATTTGTTATCTTCAGAATGTGAAAACTAGCCCTTCTCAATAT TTCCTTCTGATTAATGGAGCTCTGTTTTTGTTGAAGCTTTTTTTTGGAGTTTTATTACTTTGAGAACTGGAGGGTTTTCTTAACTTTTTCTTTTGTGTGGCTATTGTTTCTCTTTCTCTGCCATGTTTGATACTTACAAGGATTTTTTTTTATCTTTTTTATTTTATGAAATTGGTTTCAATCTCATGGGTTCAATCTTCTCTTTCACTTTATTCTGATTTATGGAACTTTGTTTCTATTTTTGGCCGTGGCTTCTCTTTCTCTGTCATTTAAAAAAAGAAAATAGAAATTAGAAGGCTTTAGTTATTACTGGGTTCAATCCTCTCTTTTTCCTTTTACTTTTGAATGTTTCATCCGAATGGGATTTTGAAATTTACTGTTGTTTTTGCATTTGTGTTTGAAGATTTTACATTTTTACATCAATTATTTACCACATAGATGATTGAGTGGAAAGTGTAAAGTGAAACAAGAGAAGGGTTAGTTTAATAGTTCCAAAGTTGGTTTCTTTTTCAGGTCATTTTTTTAACCTTCTTTCTTACCTTTTCCCCTGAAAAAAAGCACCCATTTTCTCTCCTCTTTTAGTTGCAAAATGTGATTTTTTTTTCTTTTGATGGAGTTCTGTGAAACTTTTGCTTTTTACTTCCTTTTCCATTCTTCTTTTCTCTCAAGATTTGCTTTCCTTTTCCATATAATATGATTTTTTTCTCTTTTGGAATAAATTTCAATTACTCAACTTTTGTTTTCTAGAAATTTTGTTTTATAAACTTACTGACATTTATGTAATTGTCCTATTTGTTGGTTTACATGTAACAACCATAGTTTTGGTCGAGTAGTCGGAAGAACGAGATGTGCGTTTTTCTGGTTGTTTACTCAGAATATTGAATTCTACTAGTTTCTTGGAGTCGAATGTTGTATGTTATGATCGTTGGACCTTTGAGATAATTAGTCCAAGTGTGCGTAAGTTGCCTTAAGCAGTCATGGTTGTTGCAAAAAAATGTTGCACTAAGACATTATACCATAATCTCGGACCTGTTTTCATTTGCTATGGATTTTGTTGAGCTTTTTTTGGTACTATTTCGATGGATTTGGTTGTTTTCGCCTGTTACATGCTTACATGTTTTCGTATCTAAACTTTTTGTAATCTTTTTATGCAGATACGACTATTCTGGCTATGGAGCTTCAACTGGTAAGCCTAGCGAATCGAATACGTATGCTGATATCGAAGCAGTGTACGAGTGCCTTGAAACCGAGTACGGAGTTAGCCAAGAAGATTTGATCTTGTATGGACAGTCTGTTGGAAGTGGACCAACATTGCATTTGGCTTCTAAATTGCCGAGGTTGAGGGGTGTCGTCCTGCATAGCGCGATCCTTTCAGGTCTACGAGTTCTATGTCACGTTAAGTTCACCTTTTGCTTTGATATTTATAAGAACATTAATAAAATTAAGAAGGTGAAGTGTCCTGTGCTTGTAATACATGGCACCGAAGATGATGTTGTCAATTGGCTCCATGGAAATGGATTATGGAAAATGTCGAGAGAACCATACGACCCTCTATGGATAAAAGGAGGAGGACACTGCAACTTAGAACTTTATCCTGACTATATCCGCCATCTTTGCAAGTTCATTCACGAAATGGAGAACATAACCACAAAAATTCGCCTTAAAAGAATTCGACAAACTCTTGACCTGCAAAAAAGATCCTGTTGTTGTTCAGTTTCTTGTCATGGATGGTGCTGCAAAGTCAAATGTTGGCAACCAAAATGCTCGAGACCAAGCTGTGCGAGTTGCTGCTCAGTACGGTTGAAATGTCCTGCATCCTGTAAACCTAGATGCCCGAAATGCCCGACGCTGAGGTGCTGCTTCAGCTGCCCGTCCACTAATTGCTTTAGTTGGAAATGCTGCTGCTGCACTAGTTGTTTGCAATGGAGATGCAGCAGTGACTGTTGTTGTAGCAGCTGTTTTCAATGGAGCTGCTGTTGTGAAAGAAGGTCGTCCAATGAGTGAGAAAAGGGAAGGATTTTTCAATGGTGGGTTTGTATAGAATGCTTTGCTTTTATTAACACCCCTTTCTAAAATTGTGCAGTAGCTTTATAGAACAAGAGGAAGAGAGTATTTTTATCAGATAAATTCTTTGGGGGGAAGAAGattttatttaattatattattCCTTTCAATTTGTTATCTTCAGAATGTGAAAACTAGCCCTTCTCAATAT ATGGATTTTGTTGAGCTTTTTTTGGTACTATTTCGATGGATTTGGTTGTTTTCGCCTGTTACATGCTTACATGTTTTCGTATCTAAACTTTTTGTAATCTTTTTATGCAGATACGACTATTCTGGCTATGGAGCTTCAACTGGTAAGCCTAGCGAATCGAATACGTATGCTGATATCGAAGCAGTGTACGAGTGCCTTGAAACCGAGTACGGAGTTAGCCAAGAAGATTTGATCTTGTATGGACAGTCTGTTGGAAGTGGACCAACATTGCATTTGGCTTCTAAATTGCCGAGGTTGAGGGGTGTCGTCCTGCATAGCGCGATCCTTTCAGGTCTACGAGTTCTATGTCACGTTAAGTTCACCTTTTGCTTTGATATTTATAAGAACATTAATAAAATTAAGAAGGTGAAGTGTCCTGTGCTTGTAATACATGGCACCGAAGATGATGTTGTCAATTGGCTCCATGGAAATGGATTATGGAAAATGTCGAGAGAACCATACGACCCTCTATGGATAAAAGGAGGAGGACACTGCAACTTAGAACTTTATCCTGACTATATCCGCCATCTTTGCAAGTTCATTCACGAAATGGAGAACATAACCACAAAAATTCGCCTTAAAAGAATTCGACAAACTCTTGACCTGCAAAAAAGATCCTGTTGTTGTTCAGTTTCTTGTCATGGATGGTGCTGCAAAGTCAAATGTTGGCAACCAAAATGCTCGAGACCAAGCTGTGCGAGTTGCTGCTCAGTACGGTTGAAATGTCCTGCATCCTGTAAACCTAGATGCCCGAAATGCCCGACGCTGAGGTGCTGCTTCAGCTGCCCGTCCACTAATTGCTTTAGTTGGAAATGCTGCTGCTGCACTAGTTGTTTGCAATGGAGATGCAGCAGTGACTGTTGTTGTAGCAGCTGTTTTCAATGGAGCTGCTGTTGTGAAAGAAGGTCGTCCAATGAGTGA MDFVELFLVLFRWIWLFSPVTCLHVFVSKLFVIFLCRYDYSGYGASTGKPSESNTYADIEAVYECLETEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSAILSGLRVLCHVKFTFCFDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNGLWKMSREPYDPLWIKGGGHCNLELYPDYIRHLCKFIHEMENITTKIRLKRIRQTLDLQKRSCCCSVSCHGWCCKVKCWQPKCSRPSCASCCSVRLKCPASCKPRCPKCPTLRCCFSCPSTNCFSWKCCCCTSCLQWRCSSDCCCSSCFQWSCCCERRSSNE*
BLAST of Cucsa.322100.2 vs. Swiss-Prot
Match: AB17C_CHICK (Protein ABHD17C OS=Gallus gallus GN=ABHD17C PE=2 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.9e-43 Identity = 86/164 (52.44%), Postives = 118/164 (71.95%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. Swiss-Prot
Match: AB17C_MOUSE (Protein ABHD17C OS=Mus musculus GN=Abhd17c PE=1 SV=2) HSP 1 Score: 175.6 bits (444), Expect = 8.5e-43 Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. Swiss-Prot
Match: AB17C_HUMAN (Protein ABHD17C OS=Homo sapiens GN=ABHD17C PE=2 SV=2) HSP 1 Score: 175.6 bits (444), Expect = 8.5e-43 Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. Swiss-Prot
Match: AB17C_BOVIN (Protein ABHD17C OS=Bos taurus GN=ABHD17C PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 8.5e-43 Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. Swiss-Prot
Match: AB17C_XENTR (Protein ABHD17C OS=Xenopus tropicalis GN=abhd17c PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.9e-42 Identity = 84/164 (51.22%), Postives = 117/164 (71.34%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TrEMBL
Match: A0A0A0L1S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006780 PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 1.5e-179 Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TrEMBL
Match: V4SEA7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001336mg PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 4.7e-117 Identity = 208/299 (69.57%), Postives = 228/299 (76.25%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TrEMBL
Match: A0A0J8CC16_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g107110 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-114 Identity = 203/300 (67.67%), Postives = 229/300 (76.33%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TrEMBL
Match: I1J4Q5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G014100 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 3.7e-114 Identity = 204/294 (69.39%), Postives = 222/294 (75.51%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TrEMBL
Match: K7K181_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G014100 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-113 Identity = 204/296 (68.92%), Postives = 222/296 (75.00%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TAIR10
Match: AT1G32190.1 (AT1G32190.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 394.0 bits (1011), Expect = 8.5e-110 Identity = 194/303 (64.03%), Postives = 213/303 (70.30%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TAIR10
Match: AT2G24320.1 (AT2G24320.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 262.3 bits (669), Expect = 3.9e-70 Identity = 118/163 (72.39%), Postives = 142/163 (87.12%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TAIR10
Match: AT4G31020.2 (AT4G31020.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 250.8 bits (639), Expect = 1.2e-66 Identity = 114/164 (69.51%), Postives = 139/164 (84.76%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TAIR10
Match: AT3G30380.1 (AT3G30380.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 249.2 bits (635), Expect = 3.4e-66 Identity = 122/183 (66.67%), Postives = 145/183 (79.23%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. TAIR10
Match: AT3G01690.1 (AT3G01690.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 238.8 bits (608), Expect = 4.6e-63 Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. NCBI nr
Match: gi|449456731|ref|XP_004146102.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Cucumis sativus]) HSP 1 Score: 636.7 bits (1641), Expect = 2.1e-179 Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. NCBI nr
Match: gi|659095542|ref|XP_008448636.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Cucumis melo]) HSP 1 Score: 602.4 bits (1552), Expect = 4.5e-169 Identity = 271/285 (95.09%), Postives = 275/285 (96.49%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. NCBI nr
Match: gi|567880319|ref|XP_006432718.1| (hypothetical protein CICLE_v10001336mg [Citrus clementina]) HSP 1 Score: 429.1 bits (1102), Expect = 6.8e-117 Identity = 208/299 (69.57%), Postives = 228/299 (76.25%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. NCBI nr
Match: gi|1009116890|ref|XP_015875021.1| (PREDICTED: protein ABHD17B [Ziziphus jujuba]) HSP 1 Score: 427.2 bits (1097), Expect = 2.6e-116 Identity = 203/284 (71.48%), Postives = 224/284 (78.87%), Query Frame = 1
BLAST of Cucsa.322100.2 vs. NCBI nr
Match: gi|731380572|ref|XP_010663035.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B isoform X1 [Vitis vinifera]) HSP 1 Score: 424.9 bits (1091), Expect = 1.3e-115 Identity = 210/302 (69.54%), Postives = 232/302 (76.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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