Cucsa.318710.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATGGAGGCCTTATCTTGGTGAACCTCGGAAAAACAAACTACATATATCTCTTTCTGAGTGTACTTTATCTCAGTGCAGAAAAAGATCAAGAAAAAAAaTGGTGAGTGAACTCATTGATGAGACTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGAGCTTTATGGCACCGTTGAGTTTGGAAACTTCCTTCTACGTCACGTCCCAAATGTCGTTCAGAAAATCGAGTTCCTCGAAGGCAATGGCGGCGAAGGAACTCTTCTCTATGTCACTTTTGCACCTGGTTAAAATCCTTACTCATTCTCTCTCAACTGCTGTTTAGTTCTTGTCGTTATGGCATGTTTTGTTGTGATTTTGAAAATAATACAAATTTCTTTTATTATGTTTTTGAATTACTCCTAATCATACTTGATGCTTCATTTTGCAATTTTTTACTGTCATTTGCATATCATGTTTTTATTTTCTTGTTTTAGTATGTTTGAATGTGATTTTAACCATGTCATAAAGTGATTTAAATTTTTAAAATCAAGTTAATGGGATAATATGCTCTAATAGGGAGGAAACATTCTTTTTGTTCTAAACAAATCATTTAATTAAATTCAGGCTAGTTTCCATATACTTGTTTAAAAGCTAAGAATGTACTAATTAAGCATTTAAACTGATTTTGAAGGAAGAAAGAAATATTTTAACATACTTTCAAAATCACTCTTCAAACATGCCTTCAAATCAAATACAAACTTAGGTTGACAATAATTGAAAAAAaGTTTATAACCGTTGCAGGCTTAGGTGGTATGAGATACAAAGAGAGGTTTGCAAAGGTGGATAATGAGAATCGTATAAAAATAGCAGAAATGGTGGAAGGAGGTTATTTAGATCTTGGCTTTACTCTTTATAGGTTTCGTTTTGAGATTATTGAGAAAAATGAAGAGAGTTGCATAGTAAAATCAAGTATCCAATATGAGTTAAAGGAAGAAGCTGCTTCAAATGCTTCACTTGCAACTGTTGAACCTTTGAAAGAGGTTGCTCAAGCTGCCAAACACTACTTCCTCAATAAGTCAACAGCTTAAAAGATGATGCATAATCCAATAATGTGATAACCATCCATGTGTTTTGAATGGACTTTTTTAAGCATTTGTGTTTAGAAATAAGTTTAGTGGTTGTTTGTGATGTTTAGCAACCACTTAGGACGTTTTATGTAATGGGTTTGAGGAAAAAGGTGACTCTTTTTCTTTATGAATGACAATGGCCCATTTAGTGGGTTGGGATCTTACACTTGTTGCTTTAATTTGCCTTTCTTAAATATCTATTAGTGAGATAAGATATTTGTCGGTAGTTGTAAATATAATATTAATATTATCATACATAACTGTAAATATAGTAAAATTTATC CATGGAGGCCTTATCTTGGTGAACCTCGGAAAAACAAACTACATATATCTCTTTCTGAGTGTACTTTATCTCAGTGCAGAAAAAGATCAAGAAAAAAAATGGTGAGTGAACTCATTGATGAGACTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGAGCTTTATGGCACCGTTGAGTTTGGAAACTTCCTTCTACGTCACGTCCCAAATGTCGTTCAGAAAATCGAGTTCCTCGAAGGCAATGGCGGCGAAGGAACTCTTCTCTATGTCACTTTTGCACCTGGCTTAGGTGGTATGAGATACAAAGAGAGGTTTGCAAAGGTGGATAATGAGAATCGTATAAAAATAGCAGAAATGGTGGAAGGAGGTTATTTAGATCTTGGCTTTACTCTTTATAGGTTTCGTTTTGAGATTATTGAGAAAAATGAAGAGAGTTGCATAGTAAAATCAAGTATCCAATATGAGTTAAAGGAAGAAGCTGCTTCAAATGCTTCACTTGCAACTGTTGAACCTTTGAAAGAGGTTGCTCAAGCTGCCAAACACTACTTCCTCAATAAGTCAACAGCTTAAAAGATGATGCATAATCCAATAATGTGATAACCATCCATGTGTTTTGAATGGACTTTTTTAAGCATTTGTGTTTAGAAATAAGTTTAGTGGTTGTTTGTGATGTTTAGCAACCACTTAGGACGTTTTATGTAATGGGTTTGAGGAAAAAGGTGACTCTTTTTCTTTATGAATGACAATGGCCCATTTAGTGGGTTGGGATCTTACACTTGTTGCTTTAATTTGCCTTTCTTAAATATCTATTAGTGAGATAAGATATTTGTCGGTAGTTGtaaatataatattaatattatCATACATAACtgtaaatatagtaaaatttatc aTGGTGAGTGAACTCATTGATGAGACTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGAGCTTTATGGCACCGTTGAGTTTGGAAACTTCCTTCTACGTCACGTCCCAAATGTCGTTCAGAAAATCGAGTTCCTCGAAGGCAATGGCGGCGAAGGAACTCTTCTCTATGTCACTTTTGCACCTGGCTTAGGTGGTATGAGATACAAAGAGAGGTTTGCAAAGGTGGATAATGAGAATCGTATAAAAATAGCAGAAATGGTGGAAGGAGGTTATTTAGATCTTGGCTTTACTCTTTATAGGTTTCGTTTTGAGATTATTGAGAAAAATGAAGAGAGTTGCATAGTAAAATCAAGTATCCAATATGAGTTAAAGGAAGAAGCTGCTTCAAATGCTTCACTTGCAACTGTTGAACCTTTGAAAGAGGTTGCTCAAGCTGCCAAACACTACTTCCTCAATAAGTCAACAGCTTAA MVSELIDETEIQAPAAKVWELYGTVEFGNFLLRHVPNVVQKIEFLEGNGGEGTLLYVTFAPGLGGMRYKERFAKVDNENRIKIAEMVEGGYLDLGFTLYRFRFEIIEKNEESCIVKSSIQYELKEEAASNASLATVEPLKEVAQAAKHYFLNKSTA*
BLAST of Cucsa.318710.1 vs. Swiss-Prot
Match: NCS1_PAPSO (S-norcoclaurine synthase 1 OS=Papaver somniferum GN=NCS1 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 9.9e-29 Identity = 68/153 (44.44%), Postives = 94/153 (61.44%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. Swiss-Prot
Match: NCS2_PAPSO (S-norcoclaurine synthase 2 OS=Papaver somniferum GN=NCS2 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-27 Identity = 66/153 (43.14%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. Swiss-Prot
Match: NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21 Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 34/127 (26.77%), Postives = 63/127 (49.61%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. Swiss-Prot
Match: NOD13_MEDTR (Nodulin-13 OS=Medicago truncatula GN=N13 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. TrEMBL
Match: A0A0A0LNL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437130 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 1.6e-81 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. TrEMBL
Match: A0A0A0LQZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437140 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.4e-55 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. TrEMBL
Match: A0A0A0LNC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G439140 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41 Identity = 82/152 (53.95%), Postives = 115/152 (75.66%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. TrEMBL
Match: A0A0B2SNQ7_GLYSO (S-norcoclaurine synthase OS=Glycine soja GN=glysoja_035139 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 7.9e-41 Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. TrEMBL
Match: I1LP68_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G017100 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 7.9e-41 Identity = 84/157 (53.50%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. NCBI nr
Match: gi|449460710|ref|XP_004148088.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus]) HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. NCBI nr
Match: gi|659118567|ref|XP_008459187.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis melo]) HSP 1 Score: 295.0 bits (754), Expect = 7.5e-77 Identity = 146/156 (93.59%), Postives = 152/156 (97.44%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. NCBI nr
Match: gi|778673884|ref|XP_011650080.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. NCBI nr
Match: gi|659133166|ref|XP_008466589.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis melo]) HSP 1 Score: 219.9 bits (559), Expect = 3.1e-54 Identity = 109/153 (71.24%), Postives = 129/153 (84.31%), Query Frame = 1
BLAST of Cucsa.318710.1 vs. NCBI nr
Match: gi|449460704|ref|XP_004148085.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41 Identity = 82/152 (53.95%), Postives = 115/152 (75.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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