Cucsa.318700.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAATAAAAAGACAATACATATGTGTTTTCTGAGTGGATGTGAAGAAAAGAATAATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTATATCTTCATTACTACTCCCTCTATAATTATATCGTCTGTTAATAATTTTCTTTCTACCATCTGCAATTATGACCTCTTCATCAATTAATACATATTTAATTAAAATTTCTTAAAAATTCATGCATACTTACGTTATTGAGTTTTGAAACGTGTTAGAGTAAGATTCCATGAATTAATAAACACATCTAAGATTGATTGTATAAGTACTACGTTAATACAGAATAACACTCACATTTTACGTGTTTTTTtGTGCAGTATATTTCAATCGATACACCAAAACATAGTTATAGAAGAGAGACATAGAAATAGTGATTGAAATATTTTTAATTATGTATTTAAGTATTAAGTAAATTACTCAAATTTAGAACTCAACAGGAAAAGACAAACTACAACATCTTATATTATTATTAGACATAGAGGATATATAAAACTGAAAATCATAAAAATAAGAAATCAGACTTATTTTATTTATTTTTtATTTTCGAATTTTAGAGAATCATAAAATTATAAATATTTATAGGACCACTTGGATCATAAaTATTATTTTTtATGGGTATGAATGTTAAATAATACCAGATATATTTAAATTTCTATTGTACTTAATATGTAAGATTATTAGTATTTGATCTACCAATTTTATATGTAAGTTGAAATCAAATAAAGCCAAAAGAAAAATAAATTTAGTATTATTTAATATAATCTTATATTAATTAATTAGTTAATCTATTAAAATATAAACAAATAAAATTAGGAGGCTTTTTAAACCTAAAAAATGAGTCAAACTATCTATAAGACACTAACAAATCTATTTTTTCCATTGCAAATCTATAGACATTAATATAAGTTTATTCAGGTGTTTTACTTAAAATTTATTAAAGTTAAAATAATATATGTAGATTTAATAACTAATTAAAATTAAGAGTAATAAATGATTGATATTAATTTTATTAATCAAATTATATTTTTACTAATTAATCTTCCAAATATAAAAATTCTACCGTATGAAAAGTATTAGAAAACCAATGTCCAATTGGCTTTTAAATTAGTTGTTTGGTTAATAATCGAAACATGAAGATACGACGATGGATAGAAATTTCGACATATGGACAAAAAAATTATGACTATGATTATAACATACATACAGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAATTCGATCCAATTCATATTGATCAGTACCTATGTATTAGTTTTTGCTTAATTAACGTTCCATCTCGTAACAATTTGATTTTTGAGAATTATACATTATACACTAC TTAAATAAAAAGACAATACATATGTGTTTTCTGAGTGGATGTGAAGAAAAGAATAATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAATTCGATCCAATTCATATTGATCAGTACCTATGTATTAGTTTTTGCTTAATTAACGTTCCATCTCGTAACAAtttgatttttgagaattatacattatacactac ATGGTGAGGGAGATAAGTAATGAGAGTGAGATTCAGGCGCCGGCGGCCAAAGTTTGGGATCTCTACGGCGGCCTTGAGATGGTAAACTTCATCCCAGTTCACCTCCCCAATCTCGTCCACAAAATTGACGTCCTCCAAGGCGACGGAGGCGAAGGAACTCTTCTCCATATCACTTTTGCACATGGTTTAGGAGGTCCTACAAGTTACAAAGAGAAGTTCGTGAAGATAGATAACGAAAATCGTATTAAAATAGCAGAAACGGTCGAAGGAGGTTACTTAGATCTTGGGTTTACTCTTTACAAGTTTCGTGTGGAGATAATTGAGAAAAATGAAGAAAGTTGCATTGTAAAATCAACTGTTGAATATGAATTGAAGAAAGAAGCTGCTTCAAATATTTCATTGGCAAGTGTTCAACCTTTGGTAGCCATTGCTCAAGCTGTCAACAACTATTTCCTCAATACTACTCGTCAGCCACATGTTAAAGGTGATGCATAA MVREISNESEIQAPAAKVWDLYGGLEMVNFIPVHLPNLVHKIDVLQGDGGEGTLLHITFAHGLGGPTSYKEKFVKIDNENRIKIAETVEGGYLDLGFTLYKFRVEIIEKNEESCIVKSTVEYELKKEAASNISLASVQPLVAIAQAVNNYFLNTTRQPHVKGDA*
BLAST of Cucsa.318700.1 vs. Swiss-Prot
Match: NCS1_PAPSO (S-norcoclaurine synthase 1 OS=Papaver somniferum GN=NCS1 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27 Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. Swiss-Prot
Match: NCS2_PAPSO (S-norcoclaurine synthase 2 OS=Papaver somniferum GN=NCS2 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25 Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. Swiss-Prot
Match: NCS_THLFG (S-norcoclaurine synthase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-24 Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. Swiss-Prot
Match: NCS2_COPJA (S-norcoclaurine synthase 2 OS=Coptis japonica GN=PR10A PE=2 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 8.9e-20 Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. Swiss-Prot
Match: PHBP_MEDTR (Phytohormone-binding protein OS=Medicago truncatula GN=MTR_3g055120 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 33/127 (25.98%), Postives = 60/127 (47.24%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. TrEMBL
Match: A0A0A0LQZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437140 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 4.5e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. TrEMBL
Match: A0A0A0LNL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437130 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.7e-55 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. TrEMBL
Match: A0A151TLT9_CAJCA (S-norcoclaurine synthase OS=Cajanus cajan GN=KK1_021617 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43 Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. TrEMBL
Match: C6SWU2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.9e-41 Identity = 81/150 (54.00%), Postives = 110/150 (73.33%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. TrEMBL
Match: I1LP68_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G017100 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.7e-41 Identity = 80/150 (53.33%), Postives = 110/150 (73.33%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. NCBI nr
Match: gi|778673884|ref|XP_011650080.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 6.4e-87 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. NCBI nr
Match: gi|659133166|ref|XP_008466589.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis melo]) HSP 1 Score: 292.0 bits (746), Expect = 6.7e-76 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. NCBI nr
Match: gi|659118567|ref|XP_008459187.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis melo]) HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56 Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. NCBI nr
Match: gi|449460710|ref|XP_004148088.1| (PREDICTED: S-norcoclaurine synthase-like [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54 Identity = 108/153 (70.59%), Postives = 132/153 (86.27%), Query Frame = 1
BLAST of Cucsa.318700.1 vs. NCBI nr
Match: gi|1012356815|gb|KYP68000.1| (S-norcoclaurine synthase [Cajanus cajan]) HSP 1 Score: 184.5 bits (467), Expect = 1.5e-43 Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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