Cucsa.301800.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.301800.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Zinc finger protein ZAT9
Location	scaffold02951 : 70718 .. 71225 (+)
Sequence length	508

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCCCACAAATGCAAGCTCTGTTCTAGAGCTTTCACCAATGGCAGAGCCTTAGGAGGCCATATGAAGGCTCATCTCACTGCACCTGCTGCAGCGCTTCCCTTTCCACCGCCCAAGCCTCCTCCCTCCCCCTCTTCGTCTTCTTCTTCCGACCACGATGAATCTACGCTTTACGAGCTTAGAGGAAACTCGAAGGGGAGGAATTTCAGATTCTCAGATCCTGTTTTCAACATTGTTCTTCAAGATAGAGAGAGCGAGACCGAATCCAAAAACCCAACTCGAAAACGATCCAAACGGTGGAGGAAACCGGAGGTGGAACCGGAACCCGCTAGCTCTGTTTCCGATGCTTCGCCGGAGGAAGACTTGGCTGTTTGCTTGATGATGCTGTCACGTGATCGATGGATCAAGAATCAAAATCATAATGAGAGGAGATCTTCGTTTGAGGAATTGGGGTCGAAGATTAGAGTGAAGAAAGGAATTAGAAGGAAGAAAAAGTGTGAGAAAT

mRNA sequence

ATGGTATCCCACAAATGCAAGCTCTGTTCTAGAGCTTTCACCAATGGCAGAGCCTTAGGAGGCCATATGAAGGCTCATCTCACTGCACCTGCTGCAGCGCTTCCCTTTCCACCGCCCAAGCCTCCTCCCTCCCCCTCTTCGTCTTCTTCTTCCGACCACGATGAATCTACGCTTTACGAGCTTAGAGGAAACTCGAAGGGGAGGAATTTCAGATTCTCAGATCCTGTTTTCAACATTGTTCTTCAAGATAGAGAGAGCGAGACCGAATCCAAAAACCCAACTCGAAAACGATCCAAACGGTGGAGGAAACCGGAGGTGGAACCGGAACCCGCTAGCTCTGTTTCCGATGCTTCGCCGGAGGAAGACTTGGCTGTTTGCTTGATGATGCTGTCACGTGATCGATGGATCAAGAATCAAAATCATAATGAGAGGAGATCTTCGTTTGAGGAATTGGGGTCGAAGATTAGAGTGAAGAAAGGAATTAGAAGGAAGAAAAAGTGTGAGAAAT

Coding sequence (CDS)

ATGGTATCCCACAAATGCAAGCTCTGTTCTAGAGCTTTCACCAATGGCAGAGCCTTAGGAGGCCATATGAAGGCTCATCTCACTGCACCTGCTGCAGCGCTTCCCTTTCCACCGCCCAAGCCTCCTCCCTCCCCCTCTTCGTCTTCTTCTTCCGACCACGATGAATCTACGCTTTACGAGCTTAGAGGAAACTCGAAGGGGAGGAATTTCAGATTCTCAGATCCTGTTTTCAACATTGTTCTTCAAGATAGAGAGAGCGAGACCGAATCCAAAAACCCAACTCGAAAACGATCCAAACGGTGGAGGAAACCGGAGGTGGAACCGGAACCCGCTAGCTCTGTTTCCGATGCTTCGCCGGAGGAAGACTTGGCTGTTTGCTTGATGATGCTGTCACGTGATCGATGGATCAAGAATCAAAATCATAATGAGAGGAGATCTTCGTTTGAGGAATTGGGGTCGAAGATTAGAGTGAAGAAAGGAATTAGAAGGAAGAAAAAGTGTGAGAAAT

Protein sequence

MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYELRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEKX

Homology

[Close]

BLAST of Cucsa.301800.1 vs. Swiss-Prot
Match: ZAT9_ARATH (Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           M S+KC++C ++F NG+ALGGHM++H++        P      + S  SSSD        
Sbjct: 1   MESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDP------- 60

Query: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESK----NPTRKRSKRWRK------------- 120
                    F F+    +++L+D ESE+ES     N TRKRSKR RK             
Sbjct: 61  --------KFAFTS---SVLLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQ 120

Query: 121 ----PEVEPEPA-SSVSDASPEEDLAVCLMMLSRDRWIKNQNHNE 144
               PE + EP  SS SD + EEDLA CLMMLSRD+W KN+++ E
Sbjct: 121 LGYKPESDQEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKE 147

HSP 2 Score: 36.6 bits (83), Expect = 3.3e-01
Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAH 27
           H+C +C R F +G+ALGGH ++H
Sbjct: 224 HECPICLRVFASGQALGGHKRSH 246

[Close]

BLAST of Cucsa.301800.1 vs. Swiss-Prot
Match: ZAT4_ARATH (Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 69/187 (36.90%), Postives = 91/187 (48.66%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAA--------ALPFPPPKPPP--------- 60
           M  +KC+ C ++F NGRALGGHM++H+   +A        A      +P           
Sbjct: 1   MERYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGEAEEEVEERPSQLCDDDDDTE 60

Query: 61  SPSSSSSSDHDESTLYELRGNSKGRNFRFSDPVFNIVLQDRESETESK--NPTRKRSKRW 120
           S +SSSS + D   +  L    +   F F++        D ESETES   NPTR+RSKR 
Sbjct: 61  SDASSSSGEFDNQKMNRLDDELE---FDFAED------DDVESETESSRINPTRRRSKRT 120

Query: 121 RK---------------PE---VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHNE 151
           RK               P     EPE  SS SD + EEDLA CL+MLSRD+W K Q   +
Sbjct: 121 RKLGSFDFDFEKLTTSQPSELVAEPEHHSSASDTTTEEDLAFCLIMLSRDKW-KQQKKKK 177

HSP 2 Score: 38.5 bits (88), Expect = 8.6e-02
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAH 27
           H+C +C R FT+G+ALGGH ++H
Sbjct: 243 HECPICFRVFTSGQALGGHKRSH 265

[Close]

BLAST of Cucsa.301800.1 vs. Swiss-Prot
Match: ZAT1_ARATH (Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-14
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSD----HDESTLY 63
           HKCKLC ++F NGRALGGHM++H+      L  P P  P S SSS +       D  +  
Sbjct: 5   HKCKLCWKSFANGRALGGHMRSHM------LIHPLPSQPESYSSSMADPGFVLQDRESET 64

Query: 64  ELRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRS------KRWRKPEVEPEPASS 123
           E       +  R +    +  L+ ++S  E K+ T + +      +   +   E EP SS
Sbjct: 65  ESSKKPSRKRSRLNRRSISS-LRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMSS 124

Query: 124 VSDASP-EEDLAVCLMMLSRDRWIKNQNHNE 144
           VSDA+  EED+A+ LM+LSRD+W K +  ++
Sbjct: 125 VSDAATTEEDVALSLMLLSRDKWEKEEEESD 148

HSP 2 Score: 40.0 bits (92), Expect = 3.0e-02
Identity = 13/26 (50.00%), Postives = 22/26 (84.62%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTA 30
           H+C +C++ FT+G+ALGGH ++H +A
Sbjct: 209 HECPICAKVFTSGQALGGHKRSHASA 234

[Close]

BLAST of Cucsa.301800.1 vs. TrEMBL
Match: A0A0A0KMX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162030 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 4.3e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60

Query: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120
           LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE
Sbjct: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120

Query: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK
Sbjct: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 169

[Close]

BLAST of Cucsa.301800.1 vs. TrEMBL
Match: A0A0A0KMX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162030 PE=4 SV=1)

HSP 1 Score: 33.5 bits (75), Expect = 3.1e+02
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHL 28
           KC  C + F +G+ALGGH ++HL
Sbjct: 204 KCPFCYKLFGSGQALGGHKRSHL 226

HSP 2 Score: 169.1 bits (427), Expect = 4.7e-39
Identity = 106/203 (52.22%), Postives = 126/203 (62.07%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSD-------- 60
           M  HKCKLCSR F+NGRALGGHMKAHL    A LP PP KPP SPS++S S         
Sbjct: 1   MERHKCKLCSRTFSNGRALGGHMKAHL----ATLPLPP-KPPLSPSAASFSSNSSSEEAT 60

Query: 61  HDESTL-YELRGNSKGRNFRFSDPVFNI--VLQDRESETESKNPTRKRSKRWRKPE---- 120
           HDE +L Y LR N K + FR +DP FN+  V+QDRESETESKNPTR+RS+R R+      
Sbjct: 61  HDEKSLIYGLRENPK-KCFRLADPEFNMASVVQDRESETESKNPTRRRSERTRRTVNSEL 120

Query: 121 --------VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHN-----------ERRS 169
                     PEP SSVSD SPEED+A+CLMMLSRDRW KN N+N           +   
Sbjct: 121 KKAKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNNNNNIIIINNVVSNDDVVE 180

[Close]

BLAST of Cucsa.301800.1 vs. TrEMBL
Match: A0A0B2RPC9_GLYSO (Zinc finger protein ZAT9 OS=Glycine soja GN=glysoja_004701 PE=4 SV=1)

HSP 1 Score: 38.1 bits (87), Expect = 1.2e+01
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 61
           +C  CS+ F +G+ALGGH ++HL                 PSSSS++++D   L E
Sbjct: 227 QCPFCSKVFGSGQALGGHKRSHL----------------MPSSSSTANNDSFRLKE 266

HSP 2 Score: 32.0 bits (71), Expect = 8.9e+02
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGH 23
           HKC+ C + F + RALGGH
Sbjct: 194 HKCQSCGKTFRSSRALGGH 212

HSP 3 Score: 169.1 bits (427), Expect = 4.7e-39
Identity = 106/203 (52.22%), Postives = 126/203 (62.07%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSD-------- 60
           M  HKCKLCSR F+NGRALGGHMKAHL    A LP PP KPP SPS++S S         
Sbjct: 1   MERHKCKLCSRTFSNGRALGGHMKAHL----ATLPLPP-KPPLSPSAASFSSNSSSEEAT 60

Query: 61  HDESTL-YELRGNSKGRNFRFSDPVFNI--VLQDRESETESKNPTRKRSKRWRKPE---- 120
           HDE +L Y LR N K + FR +DP FN+  V+QDRESETESKNPTR+RS+R R+      
Sbjct: 61  HDEKSLIYGLRENPK-KCFRLADPEFNMASVVQDRESETESKNPTRRRSERTRRTVNSEL 120

Query: 121 --------VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHN-----------ERRS 169
                     PEP SSVSD SPEED+A+CLMMLSRDRW KN N+N           +   
Sbjct: 121 KKAKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNNNNNIIIINNVVSNDDVVE 180

[Close]

BLAST of Cucsa.301800.1 vs. TrEMBL
Match: I1LGQ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G033100 PE=4 SV=2)

HSP 1 Score: 38.1 bits (87), Expect = 1.2e+01
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 61
           +C  CS+ F +G+ALGGH ++HL                 PSSSS++++D   L E
Sbjct: 227 QCPFCSKVFGSGQALGGHKRSHL----------------MPSSSSTANNDSFRLKE 266

HSP 2 Score: 32.0 bits (71), Expect = 8.9e+02
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGH 23
           HKC+ C + F + RALGGH
Sbjct: 194 HKCQSCGKTFRSSRALGGH 212

HSP 3 Score: 161.8 bits (408), Expect = 7.5e-37
Identity = 108/210 (51.43%), Postives = 128/210 (60.95%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPP--KPPPSPS------SSSSSD 60
           M  +KCKLCSR F+NGRALGGHMKAHL    A LP PP   +PP SPS      S+SSS+
Sbjct: 1   MERYKCKLCSRTFSNGRALGGHMKAHL----ATLPLPPQNQQPPLSPSAAASFSSNSSSE 60

Query: 61  -----HDESTL-YELRGNSKGRNFRFSDPVFNI--VLQDRESETESKNPTRKRSKRWRKP 120
                HDE +L Y LR N K + FR +DP F+   V+QDRESETESKNPTR+RSKR R+P
Sbjct: 61  QEQATHDEKSLIYGLRENPK-KCFRLADPEFDTGSVVQDRESETESKNPTRRRSKRTRRP 120

Query: 121 E------------VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHN---------- 169
                          PEP SSVSD SPEED+A+CLMMLSRDRW KN N N          
Sbjct: 121 VNLEQKKPKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNNNINVVNVNDDDVV 180

[Close]

BLAST of Cucsa.301800.1 vs. TrEMBL
Match: A0A0B2SC44_GLYSO (Zinc finger protein ZAT9 OS=Glycine soja GN=glysoja_018938 PE=4 SV=1)

HSP 1 Score: 37.0 bits (84), Expect = 2.8e+01
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 61
           +C  CS+ F +G+ALGGH ++HL                 PSSS+++++D   L E
Sbjct: 235 QCPFCSKVFGSGQALGGHKRSHL----------------MPSSSTTANNDSVRLKE 274

HSP 2 Score: 161.0 bits (406), Expect = 1.3e-36
Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPP--KPPPSPS------SSSSSD 60
           M  +KCKLCSR F+NGRALGGHMKAHL    A LP PP   +PP SPS      S+SSS+
Sbjct: 1   MERYKCKLCSRTFSNGRALGGHMKAHL----ATLPLPPQNQQPPLSPSAAASFSSNSSSE 60

Query: 61  -----HDESTL-YELRGNSKGRNFRFSDPVFNI--VLQDRESETESKNPTRKRSKRWRKP 120
                HDE +L Y LR N K + FR +DP F+   V+QDRESETESKNPTR+RSKR R+P
Sbjct: 61  QEQATHDEKSLIYGLRENPK-KCFRLADPEFDTGSVVQDRESETESKNPTRRRSKRTRRP 120

Query: 121 E------------VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHN 143
                          PEP SSVSD SPEED+A+CLMMLSRDRW KN N N
Sbjct: 121 VNLEQKKPKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNNNIN 165

[Close]

BLAST of Cucsa.301800.1 vs. TAIR10
Match: AT4G16610.1 (AT4G16610.1 C2H2-like zinc finger protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 69/155 (44.52%), Postives = 87/155 (56.13%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTL-YELR 63
           HKCKLCS++F NGRALGGHMK+HL +  ++      K   S  SSSSS  D   L Y LR
Sbjct: 5   HKCKLCSKSFCNGRALGGHMKSHLVSSQSSAR---KKLGDSVYSSSSSSSDGKALAYGLR 64

Query: 64  GNSKGRNFRFSDP---VFNIVLQDRESETESKNPTRKR---------------------S 123
            N + ++FR  +P      I   + E+E ES +P +KR                     S
Sbjct: 65  ENPR-KSFRVFNPDPESSTIYNSETETEPESGDPVKKRVRGDVSKKKKKKAKSKRVFENS 124

Query: 124 KRWRKPEVEPEPASSVSDASPEEDLAVCLMMLSRD 134
           K+ +     PEPASSVSD SPE+DLA+CLMMLSRD
Sbjct: 125 KKQKTIHESPEPASSVSDGSPEQDLAMCLMMLSRD 155

[Close]

BLAST of Cucsa.301800.1 vs. TAIR10
Match: AT3G60580.1 (AT3G60580.1 C2H2-like zinc finger protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           M S+KC++C ++F NG+ALGGHM++H++        P      + S  SSSD        
Sbjct: 1   MESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDP------- 60

Query: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESK----NPTRKRSKRWRK------------- 120
                    F F+    +++L+D ESE+ES     N TRKRSKR RK             
Sbjct: 61  --------KFAFTS---SVLLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQ 120

Query: 121 ----PEVEPEPA-SSVSDASPEEDLAVCLMMLSRDRWIKNQNHNE 144
               PE + EP  SS SD + EEDLA CLMMLSRD+W KN+++ E
Sbjct: 121 LGYKPESDQEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKE 147

HSP 2 Score: 36.6 bits (83), Expect = 1.8e-02
Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAH 27
           H+C +C R F +G+ALGGH ++H
Sbjct: 224 HECPICLRVFASGQALGGHKRSH 246

[Close]

BLAST of Cucsa.301800.1 vs. TAIR10
Match: AT2G45120.1 (AT2G45120.1 C2H2-like zinc finger protein)

HSP 1 Score: 87.4 bits (215), Expect = 9.1e-18
Identity = 69/187 (36.90%), Postives = 91/187 (48.66%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAA--------ALPFPPPKPPP--------- 60
           M  +KC+ C ++F NGRALGGHM++H+   +A        A      +P           
Sbjct: 1   MERYKCRFCFKSFINGRALGGHMRSHMLTLSAERCVITGEAEEEVEERPSQLCDDDDDTE 60

Query: 61  SPSSSSSSDHDESTLYELRGNSKGRNFRFSDPVFNIVLQDRESETESK--NPTRKRSKRW 120
           S +SSSS + D   +  L    +   F F++        D ESETES   NPTR+RSKR 
Sbjct: 61  SDASSSSGEFDNQKMNRLDDELE---FDFAED------DDVESETESSRINPTRRRSKRT 120

Query: 121 RK---------------PE---VEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHNE 151
           RK               P     EPE  SS SD + EEDLA CL+MLSRD+W K Q   +
Sbjct: 121 RKLGSFDFDFEKLTTSQPSELVAEPEHHSSASDTTTEEDLAFCLIMLSRDKW-KQQKKKK 177

HSP 2 Score: 38.5 bits (88), Expect = 4.8e-03
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAH 27
           H+C +C R FT+G+ALGGH ++H
Sbjct: 243 HECPICFRVFTSGQALGGHKRSH 265

[Close]

BLAST of Cucsa.301800.1 vs. TAIR10
Match: AT1G02030.1 (AT1G02030.1 C2H2-like zinc finger protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSD----HDESTLY 63
           HKCKLC ++F NGRALGGHM++H+      L  P P  P S SSS +       D  +  
Sbjct: 5   HKCKLCWKSFANGRALGGHMRSHM------LIHPLPSQPESYSSSMADPGFVLQDRESET 64

Query: 64  ELRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRS------KRWRKPEVEPEPASS 123
           E       +  R +    +  L+ ++S  E K+ T + +      +   +   E EP SS
Sbjct: 65  ESSKKPSRKRSRLNRRSISS-LRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMSS 124

Query: 124 VSDASP-EEDLAVCLMMLSRDRWIKNQNHNE 144
           VSDA+  EED+A+ LM+LSRD+W K +  ++
Sbjct: 125 VSDAATTEEDVALSLMLLSRDKWEKEEEESD 148

HSP 2 Score: 40.0 bits (92), Expect = 1.7e-03
Identity = 13/26 (50.00%), Postives = 22/26 (84.62%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTA 30
           H+C +C++ FT+G+ALGGH ++H +A
Sbjct: 209 HECPICAKVFTSGQALGGHKRSHASA 234

[Close]

BLAST of Cucsa.301800.1 vs. TAIR10
Match: AT5G56200.1 (AT5G56200.1 C2H2 type zinc finger transcription factor family)

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 21/60 (35.00%), Postives = 36/60 (60.00%), Query Frame = 1


Query: 4   HKCKLCSRAFTNGRALGGHMKAHLTAPAAAL-PFPPPKPPPSPSSSSSSDHDESTLYELR 63
           H C +C ++F+ G+ALGGH + H TAP + + P   P   P+  +++SS     T+ E++
Sbjct: 411 HVCNICHKSFSTGQALGGHKRCHWTAPVSTVAPTTVPTAAPTVPATASSSQVTETVQEVK 470

[Close]

BLAST of Cucsa.301800.1 vs. NCBI nr
Match: gi|449469444|ref|XP_004152430.1| (PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 6.2e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60

Query: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120
           LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE
Sbjct: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120

Query: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK
Sbjct: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 169

[Close]

BLAST of Cucsa.301800.1 vs. NCBI nr
Match: gi|449469444|ref|XP_004152430.1| (PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis sativus])

HSP 1 Score: 33.5 bits (75), Expect = 4.4e+02
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHL 28
           KC  C + F +G+ALGGH ++HL
Sbjct: 204 KCPFCYKLFGSGQALGGHKRSHL 226

HSP 2 Score: 348.6 bits (893), Expect = 6.2e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60

Query: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120
           LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE
Sbjct: 61  LRGNSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVEPEPASSVSDASPE 120

Query: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK
Sbjct: 121 EDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 169

[Close]

BLAST of Cucsa.301800.1 vs. NCBI nr
Match: gi|778700085|ref|XP_011654807.1| (PREDICTED: zinc finger protein ZAT9 isoform X2 [Cucumis sativus])

HSP 1 Score: 33.5 bits (75), Expect = 4.4e+02
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHL 28
           KC  C + F +G+ALGGH ++HL
Sbjct: 204 KCPFCYKLFGSGQALGGHKRSHL 226

HSP 2 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 145/172 (84.30%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAP        PKPPPSPSSS S DHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAP--------PKPPPSPSSSFS-DHDESTLYE 60

Query: 61  LRG-NSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE--PEPASSVSDA 120
           LR  N K  +FRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE   EPASSVSDA
Sbjct: 61  LREENPKRGDFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVELEVEPASSVSDA 120

Query: 121 SPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           SPEEDLA+CLMMLSRDRW+++QN NE RS FEELGSKI+VKKGIRRKKKCEK
Sbjct: 121 SPEEDLAICLMMLSRDRWVESQNQNEGRSWFEELGSKIKVKKGIRRKKKCEK 163

[Close]

BLAST of Cucsa.301800.1 vs. NCBI nr
Match: gi|659073464|ref|XP_008437074.1| (PREDICTED: zinc finger protein ZAT9 isoform X2 [Cucumis melo])

HSP 1 Score: 33.9 bits (76), Expect = 3.4e+02
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 1


Query: 5   KCKLCSRAFTNGRALGGHMKAHLTA 30
           KC  C + F +G+ALGGH ++HL +
Sbjct: 203 KCPFCYKLFGSGQALGGHKRSHLVS 227

HSP 2 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 145/172 (84.30%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAP        PKPPPSPSSS S DHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAP--------PKPPPSPSSSFS-DHDESTLYE 60

Query: 61  LRG-NSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE--PEPASSVSDA 120
           LR  N K  +FRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE   EPASSVSDA
Sbjct: 61  LREENPKRGDFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVELEVEPASSVSDA 120

Query: 121 SPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           SPEEDLA+CLMMLSRDRW+++QN NE RS FEELGSKI+VKKGIRRKKKCEK
Sbjct: 121 SPEEDLAICLMMLSRDRWVESQNQNEGRSWFEELGSKIKVKKGIRRKKKCEK 163

[Close]

BLAST of Cucsa.301800.1 vs. NCBI nr
Match: gi|659073462|ref|XP_008437073.1| (PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 145/172 (84.30%), Postives = 151/172 (87.79%), Query Frame = 1


Query: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAPAAALPFPPPKPPPSPSSSSSSDHDESTLYE 60
           MVSHKCKLCSRAFTNGRALGGHMKAHLTAP        PKPPPSPSSS S DHDESTLYE
Sbjct: 1   MVSHKCKLCSRAFTNGRALGGHMKAHLTAP--------PKPPPSPSSSFS-DHDESTLYE 60

Query: 61  LRG-NSKGRNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE--PEPASSVSDA 120
           LR  N K  +FRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVE   EPASSVSDA
Sbjct: 61  LREENPKRGDFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKPEVELEVEPASSVSDA 120

Query: 121 SPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEK 170
           SPEEDLA+CLMMLSRDRW+++QN NE RS FEELGSKI+VKKGIRRKKKCEK
Sbjct: 121 SPEEDLAICLMMLSRDRWVESQNQNEGRSWFEELGSKIKVKKGIRRKKKCEK 163

The following BLAST results are available for this feature:

BLAST of Cucsa.301800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZAT9_ARATH	2.0e-19	39.39	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	[more]
ZAT4_ARATH	1.6e-16	36.90	Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1	[more]
ZAT1_ARATH	4.4e-14	35.76	Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1	[more]

BLAST of Cucsa.301800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMX8_CUCSA	4.3e-93	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162030 PE=4 SV=1	[more]
A0A0A0KMX8_CUCSA	3.1e+02	52.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162030 PE=4 SV=1	[more]
A0A0B2RPC9_GLYSO	1.2e+01	35.71	Zinc finger protein ZAT9 OS=Glycine soja GN=glysoja_004701 PE=4 SV=1	[more]
I1LGQ4_SOYBN	1.2e+01	35.71	Uncharacterized protein OS=Glycine max GN=GLYMA_11G033100 PE=4 SV=2	[more]
A0A0B2SC44_GLYSO	2.8e+01	33.93	Zinc finger protein ZAT9 OS=Glycine soja GN=glysoja_018938 PE=4 SV=1	[more]

BLAST of Cucsa.301800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16610.1	1.6e-22	44.52	C2H2-like zinc finger protein	[more]
AT3G60580.1	1.1e-20	39.39	C2H2-like zinc finger protein	[more]
AT2G45120.1	9.1e-18	36.90	C2H2-like zinc finger protein	[more]
AT1G02030.1	2.5e-15	35.76	C2H2-like zinc finger protein	[more]
AT5G56200.1	4.7e-06	35.00	C2H2 type zinc finger transcription factor family	[more]

BLAST of Cucsa.301800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469444\|ref\|XP_004152430.1\|	6.2e-93	100.00	PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis sativus]	[more]
gi\|449469444\|ref\|XP_004152430.1\|	4.4e+02	52.17	PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis sativus]	[more]
gi\|778700085\|ref\|XP_011654807.1\|	4.4e+02	52.17	PREDICTED: zinc finger protein ZAT9 isoform X2 [Cucumis sativus]	[more]
gi\|659073464\|ref\|XP_008437074.1\|	3.4e+02	48.00	PREDICTED: zinc finger protein ZAT9 isoform X2 [Cucumis melo]	[more]
gi\|659073462\|ref\|XP_008437073.1\|	3.0e-71	84.30	PREDICTED: zinc finger protein ZAT9 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.301800	Cucsa.301800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.301800.1	Cucsa.301800.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.301800.1.CDS.1	Cucsa.301800.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 4..27 score: 5.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 6..26 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 4..26 score: 9
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 1..169 score: 1.7
None	No IPR available	PANTHER	PTHR26374:SF185	SUBFAMILY NOT NAMED	coord: 1..169 score: 1.7
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 4..28 score: 5.6