Cucsa.301710.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTCAGTTAAGCAATGTTTCTGATAATAGTGAGTTTGAAAAGGTTTTCTCAGGGCACCAAGAGCTTTTGGATAGTGGACTTTGTGATGTATTGGTTGTTTCAACTCCAAATATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCATCCATTTTTTTCGCAATCATATACAGTTTTATTGTAAAAACATTAGCTATATCAACGTTATTTTCTTTTTATGCTGTCTAAGCCAGCTTATACGCGCAGGACAACCCATCTAACCCTAGAATATTTGGGTGTCGAAGATACTCTTAAGAAAGAGTTAATATTAGCATTAAAATATTGAATTCGTGAGATGAATTTTCCTTTACATGCACTGATAACTGATAAGCATGTCAAGTTTTTTGTACTTCACACTTTATTTCTTACGCCTGTTAGCATCATGAGCATCTACTTCAGTTTTGTAAAATAAAATCGGTTAAAAACACTATTTTTGGTCTATAATTTAGAGTTATTCCTTTCTAGTCCTTGTACTTTCAGTAAGTCTTTAAAATGATATACGTTAGTTCTTTAAGGTTGGTTTAGTGTCTTTTTTTTTATGATAGTGTAAGAATTTAGTTTCAGTGAATTTTCATTGAAAATGATTCAATTTACAATTTTCGATAAAAATTCACATTGAAGAACCACATTTAAAAATTATTGGAAGTACACATATAATGTTTGAACTTTGGGTAACTGTTCTAAATGACAATATTACTGTCATCTATAATGGATATTGGATAGAGAGTGACATGTTGCTATATTTGTAAATATTTTGATTCACTTTGCTATATATGAAAACAACTTTTAAATTTTATTGAAAGTACAGAGGCTGAAATGATATTTTGATAGAATAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTAAGTTTTAAAACTCTTATGCTTAAAACTGTATAAACTAAAAGTTTGATGTTTCAACTCGCTCCTCCAGTAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTAAAATCTTTAGCACTTTGACTATTTATCCAGCCTTGAAAGGTTTTGTTCTGAAGGTCATTCTCAAGGAAAGTTCTATTAGTACAGGGATGAAACAACAAAGCTTATGATTAGAATACATGATTTGGTAAGATATCGAGACTATTTGTAAGGAAATTATTGAACCAGATGAATCATCTATAAGGTTTTATCTAACCCTAAGAACTAACTTCTAACTTTTAAAACCATAGGAACTAAAATCAATTATTTCCGAACTATAGTTTCTGAACTTTTTGTCAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGTAAAAGAAACCTCTCCACATCCGTCTACTCTTTTGCAAACTTGAGAAATTTTCCTCTGTAAGAAAAACATCAACTTTGTAAAATTTTCACTTCTTAACGTCTTAAAACTCGGTAACAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTAAGTTGTTTTTATCTTGAACTACTTTTACACATTTTCAATCCACAAATATTACTTCATCTCTACTCAATTCAGTTAAAAGGCACCCTCTTCTGGTCCTGAAGTAATAATTTAGTTTCTCACTAACGAATTAGTCCATTTGGTTTAACATTCATACAAGATACGTAACAGTTTAGTTCTTACACCTCAAAACTTGTGAAAGATTTCTTACACTCATAGACTAAATCAATAAAGTGATCAAGGATTTCATGTGATCTAAAAGATTATATTTTTGTGATTAGGGATTAGAGAGAAAATGGTTATAAACTTTAAAGTATATAAACTAAATTGTTACGTGTCCGTTAATTTATATGCAGGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAGTGCCAAAGTTTTGAACTCTGATCTAGACTTGTGCTGATTTTTCTCTTTCAAAGTCAAGTTTTGGTTGTTTTGTAGTATATGAATTATATTGTTGTACCCTAAACAATTCATATATTCGTCAATAAAGCAATTCATATATTCGTCA GGTTTCAGTTAAGCAATGTTTCTGATAATAGTGAGTTTGAAAAGGTTTTCTCAGGGCACCAAGAGCTTTTGGATAGTGGACTTTGTGATGTATTGGTTGTTTCAACTCCAAATATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAGTGCCAAAGTTTTGAACTCTGATCTAGACTTGTGCTGATTTTTCTCTTTCAAAGTCAAGTTTTGGTTGTTTTGTAGTATATGAATTATATTGTTGTACCCTAAACAATTCATATATTCGTCAATAAAGCAATTCATATATTCGTCA ATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAG MTHYQILMDIINHPRPHHVLVEKPLCTTVAHCKEVVMAAKKREDILVQVGLEYRYMPPVAKLIDIVKGGSLGQVKMVAIREHRFPFLVKVNNWNRFNTNTGGTLVEKCCHFFDLMRLIAGANPIRLMASGAIDVNHKDEMYDGKVPDILDNAYVIVEFDNGSRGMLDLCMFAEGSKNEQEISVVGDIGKGEAFVPENIVRFGTRVSGRNGVETLKAEDHRIKYEGLHHGSSYLEHLNFLCAMRSREREVPVVDLEDGLISVAMGVAAQLSIETSRFVTITEVMD*
BLAST of Cucsa.301710.2 vs. TrEMBL
Match: A0A0A0KMY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162620 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 3.1e-160 Identity = 282/284 (99.30%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. TrEMBL
Match: W9S0H8_9ROSA (Rhizopine catabolism protein mocA OS=Morus notabilis GN=L484_024085 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 3.2e-141 Identity = 245/284 (86.27%), Postives = 267/284 (94.01%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. TrEMBL
Match: B9SXD9_RICCO (Oxidoreductase, putative OS=Ricinus communis GN=RCOM_1388970 PE=4 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 7.9e-140 Identity = 243/284 (85.56%), Postives = 266/284 (93.66%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. TrEMBL
Match: M5WDA6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007455mg PE=4 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 7.9e-140 Identity = 245/283 (86.57%), Postives = 268/283 (94.70%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. TrEMBL
Match: A0A067KY30_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03419 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 1.0e-139 Identity = 243/283 (85.87%), Postives = 264/283 (93.29%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. TAIR10
Match: AT4G17370.1 (AT4G17370.1 Oxidoreductase family protein) HSP 1 Score: 458.0 bits (1177), Expect = 4.3e-129 Identity = 223/283 (78.80%), Postives = 248/283 (87.63%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. NCBI nr
Match: gi|449469377|ref|XP_004152397.1| (PREDICTED: uncharacterized protein LOC101203116 isoform X1 [Cucumis sativus]) HSP 1 Score: 572.4 bits (1474), Expect = 4.4e-160 Identity = 282/284 (99.30%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. NCBI nr
Match: gi|778700132|ref|XP_011654820.1| (PREDICTED: uncharacterized protein LOC101203116 isoform X2 [Cucumis sativus]) HSP 1 Score: 572.4 bits (1474), Expect = 4.4e-160 Identity = 282/284 (99.30%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. NCBI nr
Match: gi|659073436|ref|XP_008437059.1| (PREDICTED: uncharacterized protein LOC103482599 [Cucumis melo]) HSP 1 Score: 554.3 bits (1427), Expect = 1.2e-154 Identity = 272/284 (95.77%), Postives = 281/284 (98.94%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. NCBI nr
Match: gi|703131461|ref|XP_010104884.1| (Rhizopine catabolism protein mocA [Morus notabilis]) HSP 1 Score: 509.2 bits (1310), Expect = 4.6e-141 Identity = 245/284 (86.27%), Postives = 267/284 (94.01%), Query Frame = 1
BLAST of Cucsa.301710.2 vs. NCBI nr
Match: gi|1009157096|ref|XP_015896589.1| (PREDICTED: inositol 2-dehydrogenase 2 [Ziziphus jujuba]) HSP 1 Score: 508.8 bits (1309), Expect = 6.0e-141 Identity = 243/283 (85.87%), Postives = 267/283 (94.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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