Cucsa.301710.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATGGCACATGGCAGACGTAATTCACAGCGGGGAAGAGAGAAGCCATTGCAATAATAAACGAGAAAGCAACTGCAAATTAACACTTCCTTTCCTTCTCAATATTCTCATCCATGGCTTCTTTGGCTTCTACTCACTCAACAATCAAATATGGAATCATTGGAGTCGGAATGATGGGCCGAGAACATCTCCTTAATCTCTTCCATCTTCAAGATAAAGGTGTCGCCGTTGTTGCCATAGCTGACCCACATGCTTCTTCACAGCGCCAAGCCCTTGATTTAGCTCAATCATTTGGATGGAAAATGGAGGTATGCTATTTAGTGTGATTGTTGCCACTGTTCGATTTAATGGCTCTTTTTCCGTCTTATATGCTCAATTTCAATTTTGTATTTAGGATTGAGTTTGGTAACCATAAATTAAAAACAGCAACAAAAAATGAAAGGGTTATTAGACAGACTCTAATTAGTTTCATGGAAGTAGTTTATCAAGTGGAATCAAGTTCTAAGAAAGGGTTAAAATACTGATTTTCGTCAAAATATTTCTAAAAGGAAAAAAATTATATTTATTTAGATTAACCGTTGTTTTTAATAGAAAGTTTATGAATATAGTTATTGGTATATTTCTATTCATATTAGACTAAATAGATAACATATTGTCTTATTAGTATTTGTAAAAGATGTTAGAGATATTCATGGTTATTTAATATCAATATTGAATTCTTTGAACGGGTACAGTATCATATATTCATGGTTGGCATTTTGTGAGGTAAACATGTTAGTTTTTATTGTTTTCATAATCTAGATGATTTGAAATTAGCAAAATCAAATTTAGATCATCTGTCAAAATAAAACCAAAACTCTCTTGCTTTATAGACGATTTATCAATTGAAAGCTTTGATGAACATATTTACAGTTCTTTAAATTTATATACAGAACAGAACATTATGGGCAGGTGATATTTCTGCTCTTCCATAAACTAACTCTTCATTCTATGAGCAGGTTTCAGTTAAGCAATGTTTCTGATAATAGTGAGTTTGAAAAGGTTTTCTCAGGGCACCAAGAGCTTTTGGATAGTGGACTTTGTGATGTATTGGTTGTTTCAACTCCAAATATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCATCCATTTTTTTCGCAATCATATACAGTTTTATTGTAAAAACATTAGCTATATCAACGTTATTTTCTTTTTATGCTGTCTAAGCCAGCTTATACGCGCAGGACAACCCATCTAACCCTAGAATATTTGGGTGTCGAAGATACTCTTAAGAAAGAGTTAATATTAGCATTAAAATATTGAATTCGTGAGATGAATTTTCCTTTACATGCACTGATAACTGATAAGCATGTCAAGTTTTTTGTACTTCACACTTTATTTCTTACGCCTGTTAGCATCATGAGCATCTACTTCAGTTTTGTAAAATAAAATCGGTTAAAAACACTATTTTTGGTCTATAATTTAGAGTTATTCCTTTCTAGTCCTTGTACTTTCAGTAAGTCTTTAAAATGATATACGTTAGTTCTTTAAGGTTGGTTTAGTGTCTTTTTTTTTATGATAGTGTAAGAATTTAGTTTCAGTGAATTTTCATTGAAAATGATTCAATTTACAATTTTCGATAAAAATTCACATTGAAGAACCACATTTAAAAATTATTGGAAGTACACATATAATGTTTGAACTTTGGGTAACTGTTCTAAATGACAATATTACTGTCATCTATAATGGATATTGGATAGAGAGTGACATGTTGCTATATTTGTAAATATTTTGATTCACTTTGCTATATATGAAAACAACTTTTAAATTTTATTGAAAGTACAGAGGCTGAAATGATATTTTGATAGAATAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTAAGTTTTAAAACTCTTATGCTTAAAACTGTATAAACTAAAAGTTTGATGTTTCAACTCGCTCCTCCAGTAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTAAAATCTTTAGCACTTTGACTATTTATCCAGCCTTGAAAGGTTTTGTTCTGAAGGTCATTCTCAAGGAAAGTTCTATTAGTACAGGGATGAAACAACAAAGCTTATGATTAGAATACATGATTTGGTAAGATATCGAGACTATTTGTAAGGAAATTATTGAACCAGATGAATCATCTATAAGGTTTTATCTAACCCTAAGAACTAACTTCTAACTTTTAAAACCATAGGAACTAAAATCAATTATTTCCGAACTATAGTTTCTGAACTTTTTGTCAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGTAAAAGAAACCTCTCCACATCCGTCTACTCTTTTGCAAACTTGAGAAATTTTCCTCTGTAAGAAAAACATCAACTTTGTAAAATTTTCACTTCTTAACGTCTTAAAACTCGGTAACAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTAAGTTGTTTTTATCTTGAACTACTTTTACACATTTTCAATCCACAAATATTACTTCATCTCTACTCAATTCAGTTAAAAGGCACCCTCTTCTGGTCCTGAAGTAATAATTTAGTTTCTCACTAACGAATTAGTCCATTTGGTTTAACATTCATACAAGATACGTAACAGTTTAGTTCTTACACCTCAAAACTTGTGAAAGATTTCTTACACTCATAGACTAAATCAATAAAGTGATCAAGGATTTCATGTGATCTAAAAGATTATATTTTTGTGATTAGGGATTAGAGAGAAAATGGTTATAAACTTTAAAGTATATAAACTAAATTGTTACGTGTCCGTTAATTTATATGCAGGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAGTGCCAAAGTTTTGAACTCTGATCTAGACTTGTGCTGATTTTTCTCTTTCAAAGTCAAGTTTTGGTTGTTTTGTAGTATATGAATTATATTGTTGTACCCTAAACAATTCATATATTCGTCAATAAAGCAATTCATATATTCGTCA AAGATGGCACATGGCAGACGTAATTCACAGCGGGGAAGAGAGAAGCCATTGCAATAATAAACGAGAAAGCAACTGCAAATTAACACTTCCTTTCCTTCTCAATATTCTCATCCATGGCTTCTTTGGCTTCTACTCACTCAACAATCAAATATGGAATCATTGGAGTCGGAATGATGGGCCGAGAACATCTCCTTAATCTCTTCCATCTTCAAGATAAAGGTGTCGCCGTTGTTGCCATAGCTGACCCACATGCTTCTTCACAGCGCCAAGCCCTTGATTTAGCTCAATCATTTGGATGGAAAATGGAGGTTTTCTCAGGGCACCAAGAGCTTTTGGATAGTGGACTTTGTGATGTATTGGTTGTTTCAACTCCAAATATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAGTGCCAAAGTTTTGAACTCTGATCTAGACTTGTGCTGATTTTTCTCTTTCAAAGTCAAGTTTTGGTTGTTTTGTAGTATATGAATTATATTGTTGTACCCTAAACAATTCATATATTCGTCAATAAAGCAATTCATATATTCGTCA ATGGCTTCTTTGGCTTCTACTCACTCAACAATCAAATATGGAATCATTGGAGTCGGAATGATGGGCCGAGAACATCTCCTTAATCTCTTCCATCTTCAAGATAAAGGTGTCGCCGTTGTTGCCATAGCTGACCCACATGCTTCTTCACAGCGCCAAGCCCTTGATTTAGCTCAATCATTTGGATGGAAAATGGAGGTTTTCTCAGGGCACCAAGAGCTTTTGGATAGTGGACTTTGTGATGTATTGGTTGTTTCAACTCCAAATATGACTCACTATCAAATTCTCATGGATATCATCAATCATCCTAGACCTCATCATGTACTTGTGGAGAAGCCATTATGCACAACAGTTGCTCACTGCAAAGAGGTCGTAATGGCCGCAAAAAAGAGGGAGGACATACTAGTTCAAGTTGGACTGGAATACAGATACATGCCACCAGTTGCTAAACTGATTGACATAGTGAAGGGTGGGAGTCTTGGACAAGTTAAAATGGTGGCAATTCGTGAGCATCGGTTTCCTTTCTTGGTTAAGGTCAACAACTGGAACCGGTTCAATACTAATACTGGGGGAACTCTGGTAGAGAAATGCTGCCATTTCTTTGATCTTATGAGACTGATTGCAGGTGCAAATCCTATTCGTTTAATGGCATCTGGAGCAATTGATGTTAATCACAAAGATGAAATGTATGATGGGAAGGTACCAGATATACTTGACAATGCATATGTAATAGTTGAATTTGACAATGGTTCAAGAGGGATGCTGGATCTTTGTATGTTTGCTGAGGGAAGTAAAAACGAACAGGAGATATCAGTTGTTGGTGATATTGGAAAGGGTGAGGCTTTTGTTCCTGAAAACATTGTTCGTTTCGGCACTCGAGTTTCTGGGAGAAATGGAGTCGAAACATTAAAAGCAGAGGATCACAGAATCAAGTACGAAGGTCTGCATCATGGGTCTAGCTATTTGGAACACCTAAATTTTTTGTGTGCAATGAGAAGTAGAGAGAGAGAAGTTCCAGTAGTGGACTTAGAAGATGGATTGATTTCAGTAGCCATGGGAGTTGCTGCACAACTCTCTATAGAGACTTCTCGATTTGTCACCATTACTGAAGTCATGGATTAG MASLASTHSTIKYGIIGVGMMGREHLLNLFHLQDKGVAVVAIADPHASSQRQALDLAQSFGWKMEVFSGHQELLDSGLCDVLVVSTPNMTHYQILMDIINHPRPHHVLVEKPLCTTVAHCKEVVMAAKKREDILVQVGLEYRYMPPVAKLIDIVKGGSLGQVKMVAIREHRFPFLVKVNNWNRFNTNTGGTLVEKCCHFFDLMRLIAGANPIRLMASGAIDVNHKDEMYDGKVPDILDNAYVIVEFDNGSRGMLDLCMFAEGSKNEQEISVVGDIGKGEAFVPENIVRFGTRVSGRNGVETLKAEDHRIKYEGLHHGSSYLEHLNFLCAMRSREREVPVVDLEDGLISVAMGVAAQLSIETSRFVTITEVMD*
BLAST of Cucsa.301710.1 vs. Swiss-Prot
Match: IOLG_SALA4 (Inositol 2-dehydrogenase OS=Salmonella agona (strain SL483) GN=iolG PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.7e-15 Identity = 50/161 (31.06%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. Swiss-Prot
Match: IOLG_SALPB (Inositol 2-dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=iolG PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.7e-15 Identity = 50/161 (31.06%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. Swiss-Prot
Match: IOLG_SALTY (Inositol 2-dehydrogenase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=iolG PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.7e-15 Identity = 50/161 (31.06%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. Swiss-Prot
Match: IOLG_RUBXD (Inositol 2-dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=iolG PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. Swiss-Prot
Match: IOLG_LACPL (Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=iolG PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.2e-09 Identity = 46/170 (27.06%), Postives = 80/170 (47.06%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TrEMBL
Match: A0A0A0KMY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162620 PE=4 SV=1) HSP 1 Score: 745.3 bits (1923), Expect = 3.5e-212 Identity = 370/372 (99.46%), Postives = 372/372 (100.00%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TrEMBL
Match: A0A151SKP8_CAJCA (Rhizopine catabolism protein mocA OS=Cajanus cajan GN=KK1_001589 PE=4 SV=1) HSP 1 Score: 632.1 bits (1629), Expect = 4.3e-178 Identity = 305/362 (84.25%), Postives = 338/362 (93.37%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TrEMBL
Match: A0A0B2SIJ2_GLYSO (Putative oxidoreductase yrbE OS=Glycine soja GN=glysoja_031684 PE=4 SV=1) HSP 1 Score: 632.1 bits (1629), Expect = 4.3e-178 Identity = 304/362 (83.98%), Postives = 339/362 (93.65%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TrEMBL
Match: I1K0R9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G061300 PE=4 SV=2) HSP 1 Score: 632.1 bits (1629), Expect = 4.3e-178 Identity = 304/362 (83.98%), Postives = 339/362 (93.65%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TrEMBL
Match: B9GYC8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07610g PE=4 SV=2) HSP 1 Score: 631.3 bits (1627), Expect = 7.3e-178 Identity = 300/372 (80.65%), Postives = 346/372 (93.01%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. TAIR10
Match: AT4G17370.1 (AT4G17370.1 Oxidoreductase family protein) HSP 1 Score: 576.2 bits (1484), Expect = 1.4e-164 Identity = 278/360 (77.22%), Postives = 317/360 (88.06%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. NCBI nr
Match: gi|449469377|ref|XP_004152397.1| (PREDICTED: uncharacterized protein LOC101203116 isoform X1 [Cucumis sativus]) HSP 1 Score: 745.3 bits (1923), Expect = 5.0e-212 Identity = 370/372 (99.46%), Postives = 372/372 (100.00%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. NCBI nr
Match: gi|659073436|ref|XP_008437059.1| (PREDICTED: uncharacterized protein LOC103482599 [Cucumis melo]) HSP 1 Score: 723.4 bits (1866), Expect = 2.0e-205 Identity = 358/372 (96.24%), Postives = 368/372 (98.92%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. NCBI nr
Match: gi|1012344185|gb|KYP55377.1| (Rhizopine catabolism protein mocA [Cajanus cajan]) HSP 1 Score: 632.1 bits (1629), Expect = 6.2e-178 Identity = 305/362 (84.25%), Postives = 338/362 (93.37%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. NCBI nr
Match: gi|356514368|ref|XP_003525878.1| (PREDICTED: inositol 2-dehydrogenase 2 isoform X1 [Glycine max]) HSP 1 Score: 632.1 bits (1629), Expect = 6.2e-178 Identity = 304/362 (83.98%), Postives = 339/362 (93.65%), Query Frame = 1
BLAST of Cucsa.301710.1 vs. NCBI nr
Match: gi|566161419|ref|XP_002303360.2| (hypothetical protein POPTR_0003s07610g [Populus trichocarpa]) HSP 1 Score: 631.3 bits (1627), Expect = 1.1e-177 Identity = 300/372 (80.65%), Postives = 346/372 (93.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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