Cucsa.291870.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAATGGGCAGATGCATGAAAATCATCTATTACAGCTCCTTTTGGGGATAATACAGTGGATTGATCCTCCGGATGCTGTTTCGAGAGCAATTGAAAGTGGAAAATGTGAAAGGTTAGCTTGCACTTTTGATTTCTTCATGATCCTTCTGTTCAATATTTTGTCTGTTTTTCTCATGTACAATATCTTTTTCTTGGGTTAAGTGAAATGCTTGATGGTTGTCGTGCATTGCTATCCATTGCAACCGTAACAAGTCCCTCTGTGTTTGACCAACTACTTAAATCAATCAGGTCAGTAAAAGAGCGTTCCTTGTGATTCAGTAACAAATTTATAGTCATGCTTTGTAACTATTCCATTTTTAATTTATATGGTTGGTCACGTTTGATCGGATTCTTTTGCATTGATATTCCAGACCGTTTGGCACCCTTCAACTGTTATCTAGTTTAATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGCGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCCTGGACAGCCCTCCTCATAGTATGTAGCACTCAATATTTAATAAATTGTCTTGTAATTGTATTAAGTTTGAACTAGTAAATCTTCATTACCAAGAACAATGCAGTTATGGGGTGATTGGATAAAGTTTGGCTAGTCAATCTTCTTCATTAAGGAGAACAATATTGTTGGTGATATATAATTAAATTTGCCTTCAACCACAAGCTTAAGCTTTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATATAATTATTCTGCCTTGATTCTTCTTCCGTTCTTCTTTCAAACACTAGGAGACGTCCGTCTAAAAATTTTATCTTTAGATTGTCTTGTCCTAGTTTTTAGTGGAGTGTCTTGTCTTGTCTCTCTTATGCCTCTCATTTTCTGCTTTTAATGCTAAAAGGACCATTGGCTTCCAGAAACACTATTGCTTGCACTTGGTTGAAGATGAGTCACAGTTCTTAATTGCACGGATATTTATCTGTATATTTTAAATATTTCTGACATTGTATGATTTTGGAACTAATTATTGCAATAAGTAGTCTAAATTGAGATTTCTTTTGCCCTTGTTTTCTTCAGCCATTAGAGAGGTGTGGTCAGAATTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGGTGGTTAGAGCTTGCTTCTAAATTTGAGAAATCTTCTCTTAACTTATATTATTAGCTAATGGTGATATGGGGTCGCAGCTGCATCTGCCTCTGCATTAGATGACAATATTGAATCTGAATATTTTCAAGCTTCCGTTTCTGGTGAGAGAATTATAGTAACCTACTTTTCAAAACCATTATTGTGATAAATGATGTTCTACCTGCTACCATTTGTCACTATCTGCATTTTGTTGCTTCTGCAGCCATGGATGAAAGATTAAGTGCTTATGCTCTTATTGCGAGGGCAGCAATAAATGTCACAGTTCCCTTCCTCATAAGATTGTTCTCAGAGCGTCTCTCGAAGCTTAATCAGGTTCCTTTCCATGCACTAAGGATACCTTTGTGGAACATTCTACGATGTTAACTGCTTGAATAATGGGTTTGTTATTTAGTTTTCAACATTTCAAATGTGGAAAAAGAAAAAAAGAATTAGACCATGCTGGGTTCAGAGTTAACCTGATTTGTAGTTCAAGTTCATCTGTCATTTGACCCATCTAGCTCAAGGGGTACAATCATCCCATGCATGAGAGTCAGCGACTGATAAAGTGAAGTCCATATAAACTATTTGATATGTATAAAATGAAGTACAATGACCATTTGAAAGGTTCTTATCCTTAGGTACAAAACTACTTGACGTGTATGTATTTTTTTCCAATAAAAAACCTTTTGATTAAATTAGTCGTATGTCTTCAAGTAGTAATGGTGGAATCCCCCAAAATGTGATAGAAAGTGTTCAAGTGTGAGAATCAGAAACTGATCAAGCTTACACTAAAGTTATGATGCCTACAAGAAGAAATGAAATCGCTATTTGGAAGATGCTTGTTTTCAGAATAGAAGATTTTAGTTTTAAATCAACCTGTCTAATCTGTTCATGCTTTTATTTTTTGAAAAGCTCTTTATTAATATATTAATAATGAAACAGAAACTCATAGTACAAGAGAATTATACAATGAGCATGTAAACCATGGATCACGAGGTGCACCTAGGCATCTCAATTAGGTTGACACCCATAGCACCCTCGTCATATCCAAAGAAGCTAAAAAAACCAAAAACAAAGGTGTATGTCCAAAAGCAAAACAAAACAACTCAAAGGAAGTACAAAGAAATAGAAATAAGAAGACTAAACACACTAAACATCCAATTGAAGAAAAGACGACTGATTAGGCTTATATCTTGCACTGAGTCAATCTTGAAATCCTTGGTGAGGGAACACCATGAGGAGGCTAAAATTTTATTGACTCCAACGGGTTCTTACACCAGGAAGCTTGAAGGTGTTCATGCATTTATTAGTGAACTTTTTATTAGAAGAAATGAAATGCTATTTGGATGCATTTCATTTCCTCCTCAATCCACTGTTTGGGGAGAGGTCGTTTTCTCTTGTGCGCTAGTGTTTGTGCCACCTTATGGGTGTTCTGGGATGAGAGGAATAGTAGGGTGTTTAGGGATAAAGAGGGAGTGGAGAAATCTGGTCTCTTGTTCATCTTCTTGTTTCTCGTTGGGCTTCAATTTTGAAGACCTATTGCAATTAAGCTTTAGACATGATTTTGTATAGTTGGAGTCCCTTCTTGTTGAGGGAGTCCCTTTTTTTGTGGACTTGGTTTTTGCATGCTCGTGTATTCTTTCATTTTTTTTTTCAATGAAAGTTGTTCTTATAAAAAAAACGCTTTATTGAGACTGTGAGGGAGAGGGGGAAGGCATTGTTTTAGCAAATTTGGCATATGCGGAATTTGTAGATCTGTTGAGCATTGTGGAGAAGAGAGTACTCTCGAAACTCCCTTGGCTTTCTCTAATTAGTAAATATGTTATTTTAGACTTATCAATTTCCACGGAGCATGTTCAATTCTGATGTGAATAATTCACTTGAAAACTTCCATGTGGTTCTAGTTCTATTAATTTACCCATAAATATTCAGCAGTTTATATATCCTCCACGTCTGTGACAATAAGCCTTGTTTCTTAACTAACTTTTTTGGTTTCTTATTTTTATATCTTTTACTGTCTCCACATAATGCGAAGATTGATATATTTTTGTCGGTGGTGTTTTGTAGGGAAGGGGCATCATTGACCCAACTGAAACACTAGAAGAAATTTACTCACTTCTGTTAATAATTGGGCACGTGCTTGCTGATGAAGTGGAGGGGGAAACACCGTTGGTAAGCCTCTTTTTGGGCAACAAATTGTATTATTTATATGGTCTCTTTTTGCTTCCATCTATTTATAAAGTTTCTGTAGTATTTCTTGTAAAATTTACCATAGCATTTTGA ATAATGGGCAGATGCATGAAAATCATCTATTACAGCTCCTTTTGGGGATAATACAGTGGATTGATCCTCCGGATGCTGTTTCGAGAGCAATTGAAAGTGGAAAATGTGAAAGTGAAATGCTTGATGGTTGTCGTGCATTGCTATCCATTGCAACCGTAACAAGTCCCTCTGTGTTTGACCAACTACTTAAATCAATCAGACCGTTTGGCACCCTTCAACTGTTATCTAGTTTAATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGCGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCCTGGACAGCCCTCCTCATACCATTAGAGAGGTGTGGTCAGAATTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGCTGCATCTGCCTCTGCATTAGATGACAATATTGAATCTGAATATTTTCAAGCTTCCGTTTCTGCCATGGATGAAAGATTAAGTGCTTATGCTCTTATTGCGAGGGCAGCAATAAATGTCACAGTTCCCTTCCTCATAAGATTGTTCTCAGAGCGTCTCTCGAAGCTTAATCAGGGAAGGGGCATCATTGACCCAACTGAAACACTAGAAGAAATTTACTCACTTCTGTTAATAATTGGGCACGTGCTTGCTGATGAAGTGGAGGGGGAAACACCGTTGGTAAGCCTCTTTTTGGGCAACAAATTGTATTATTTATATGGTCTCTTTTTGCTTCCATCTATTTATAAAGTTTCTGTAGTATTTCTTGTAAAATTTACCATAGCATTTTGA ATAATGGGCAGATGCATGAAAATCATCTATTACAGCTCCTTTTGGGGATAATACAGTGGATTGATCCTCCGGATGCTGTTTCGAGAGCAATTGAAAGTGGAAAATGTGAAAGTGAAATGCTTGATGGTTGTCGTGCATTGCTATCCATTGCAACCGTAACAAGTCCCTCTGTGTTTGACCAACTACTTAAATCAATCAGACCGTTTGGCACCCTTCAACTGTTATCTAGTTTAATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGCGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCCTGGACAGCCCTCCTCATACCATTAGAGAGGTGTGGTCAGAATTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGCTGCATCTGCCTCTGCATTAGATGACAATATTGAATCTGAATATTTTCAAGCTTCCGTTTCTGCCATGGATGAAAGATTAAGTGCTTATGCTCTTATTGCGAGGGCAGCAATAAATGTCACAGTTCCCTTCCTCATAAGATTGTTCTCAGAGCGTCTCTCGAAGCTTAATCAGGGAAGGGGCATCATTGACCCAACTGAAACACTAGAAGAAATTTACTCACTTCTGTTAATAATTGGGCACGTGCTTGCTGATGAAGTGGAGGGGGAAACACCGTTGGTAAGCCTCTTTTTGGGCAACAAATTGTATTATTTATATGGTCTCTTTTTGCTTCCATCTATTTATAAAGTTTCTGTAGTATTTCTTGTAAAATTTACCATAGCATTTTGA NGQMHENHLLQLLLGIIQWIDPPDAVSRAIESGKCESEMLDGCRALLSIATVTSPSVFDQLLKSIRPFGTLQLLSSLMGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQNSLLPQEGISAAANLFALIVESELKAASASALDDNIESEYFQASVSAMDERLSAYALIARAAINVTVPFLIRLFSERLSKLNQGRGIIDPTETLEEIYSLLLIIGHVLADEVEGETPLVSLFLGNKLYYLYGLFLLPSIYKVSVVFLVKFTIAF*
BLAST of Cucsa.291870.1 vs. TrEMBL
Match: A0A0A0M0V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G680090 PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-124 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. TrEMBL
Match: A0A067JUS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23548 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 7.9e-97 Identity = 178/238 (74.79%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. TrEMBL
Match: M5W570_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000522mg PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96 Identity = 183/238 (76.89%), Postives = 211/238 (88.66%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. TrEMBL
Match: A0A0D2N3H4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G249100 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.3e-95 Identity = 178/238 (74.79%), Postives = 209/238 (87.82%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. TrEMBL
Match: A0A0D2PI41_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G249100 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.3e-95 Identity = 178/238 (74.79%), Postives = 209/238 (87.82%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. TAIR10
Match: AT3G04490.1 (AT3G04490.1 unknown protein) HSP 1 Score: 314.7 bits (805), Expect = 5.6e-86 Identity = 160/238 (67.23%), Postives = 196/238 (82.35%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. NCBI nr
Match: gi|778664303|ref|XP_011660266.1| (PREDICTED: exportin-4 isoform X1 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 2.4e-126 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. NCBI nr
Match: gi|778664306|ref|XP_011660267.1| (PREDICTED: exportin-4 isoform X2 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 2.4e-126 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. NCBI nr
Match: gi|700211666|gb|KGN66762.1| (hypothetical protein Csa_1G680090 [Cucumis sativus]) HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. NCBI nr
Match: gi|659086150|ref|XP_008443789.1| (PREDICTED: exportin-4 isoform X2 [Cucumis melo]) HSP 1 Score: 452.6 bits (1163), Expect = 4.9e-124 Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 1
BLAST of Cucsa.291870.1 vs. NCBI nr
Match: gi|659086148|ref|XP_008443788.1| (PREDICTED: exportin-4 isoform X1 [Cucumis melo]) HSP 1 Score: 452.6 bits (1163), Expect = 4.9e-124 Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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