Cucsa.291640.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATAACCCACTTTATAATTTCACACTTTCCCTTATTTTCTCCTCCTCCCCTCCATAACCACTCCTTTTCCCCATTCTTTCACCTCCAAAAATTAAAaCAAAACAATACAAAAATATTGAGATTGTGAAGATACTCAAAATGGGAAGCTTACTTGGGTTTGAAGAGACAGAGCTCCGTCTTGGTCTGCCCGGCGGGGACGGAAGAAACGATGGCGACGCCGTGAAAAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATATTGTGACTGATTCCAACCAAGGCAACAAAACGACCGACAAAAATGTCGTTTCGAGCTTCGTCAATAAAGATCTTCCGAAGCCTCCTCCGGCCAAGTATGAACTCCCATCTCTCTCTATTTTtCATTATTATCATTTCAAAAAAAaGaTTAATGACAGTTAATAAAGAGAAATTTTCAGCATAAAAGGTACACAATTTTTACATTCTATTCTCACATATATTTTTATTTtCTAGAAAACAATTAGATGAATAAAAAAaaaCTCAGTATTTGCATCCCCCTAGATTTACTTCTATGGATTTTAGGCTCAGAATTAAATATTTATTTTtAAATTTAAAaTATAATTAATATTCATTAAAAAAAaTGAATTGTAGTTGAAATAAAAATAATGTAAGGATGATGTGTATATGGGCATCAAAAATTGAGTTGGGAAGAGAAAGAAATGATGACCAAGTAAACAAAAAAAAAaGAAaGAAAGAAAGAGAAAAGGCAAAATAATTGTGGTTTCGGATTTCATGGAAATTTTTtGTTTtGTTGTCGGACAAATACACCAAAACTACAAAACATATGGAATCTTTTCTTTTTCTCAATAGTCAATGTGTCCAAAAGTTATTAACTAAATGTTTCAAAAAGATAAATTCAAAACAATTCTTCTAATTCTTATTTCTCTTTGCTCATATCCTTCCAATTTTATTTTTATATGCTATATAAATCACCATAAATTACTACTTATATATCTTTTATATTATGATAGATATAGATAATATCGTACCATAATTAGATTGTGCTACTTGTACCTATAAAAATATTTTtCATCATTATTTCAATTAATTTCAAATTTTATTCGTAATGGTTTAAATTGATTGAAAGTTAACGCTAACAAAATAAAGTTGGAGGAACTAATTGGATAAGATTATCTTACTTGTACACATATTTTGTTCCACTAAATTTAATGATAGTTTTGAGAGATAATGACATGACTCCCTGATAAATCATGGAATGCATGAAAGAAAAAGAAATTAAATTGAAGATTTAGAAAGAACCGAATTGAAAATGAAGTAAAATGGTAAAGTTAAGTAATTAAGTAATGATTGGTTAGGGAGAATTATTGTTTAATAAAGGAATAATAATAAATTCGTGATGTGAATTTGGCAGGGCGCAGGTTGTGGGTTGGCCACCGGTAAAGTCGTTGAGGAGAAACATCGTAGGGCCGCCAAAGAAGAATAAATTAGAAGAAACCGAGAAGAACGCCGTCATAAGCGGCGGTGGCTGTAGCGTCGGTGCGGCAGCGTTTATCAAAGTCAGTATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGTAGCTACCAAGAGCTTTCCGATGCCCTACGCAAGATGTTTGCCTCTTTCACTGCAGGTCATTTCCAAATTAATTACCCTTTTTATTATTATTATTTTGTAGGAGTTTATGTGTAGGATAAAAAGTTGAATGATTGGGGGTTGAAATTGAAATATCAGGTCAGTGTGGAGCACAAAAGATGAGGGATTACATGAATGAAAGAAAATTAATAGATGTGTCAAATGGGTCTGATTATGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTGTTGGAGATGTCCCATGGGAGTATGTCTTTCCAACTCTCTCTCATTTTTATTTCAAATTTTTAACTCCCCAACTCTTTTTTtAACTGGTTCTTCATTCACAAACTAGTCAATTTTTTATTGAATTTTTCATTTTAATCCTTAAAATGTACCATTTAATAAAAAaTTTAAGGAACCAAAAGGATTGGTTTGATCCCTTACTTTTAAAGAGTTTGATTATGTACCAAAATTATAAGTTTGGCTGTAAAATATCTAGCTATTATCTACGTCCTTAACCTTTTAATGTTTTGTTCAATAGATATGTCAGGAACTAATTATAAATGTTGTTTGATTGATGAACAGCATGTTTGTGGATTCGTGCAAACGCTTGAGAATAATGAAAGGATCTGAAGCCATTGGACTTGGTAAGTTATAATCTAATTAAATATAAGAGTTAGTTTTTAAATATACTAAAATAAAATTGTAAAATCTATTGATAACATTATAAAATTTATTTGTATTTTATTATATTTGTAAATATTTTAAACAAATTTATCATTGAAAAAATGAGATTAAGGTTCTTTAAAAAATTTCTTAAAAGTAAATTAAATTGTGTGGTAACGATGAGCGATGTATTTTCCTTGGATTTCTTTTATGCCCAATTTTATTTCTTTTTTTtCTTAATACTTTTGAATATTTTTTTtATAAACGTAAATTAATATATTAATTGTCAATTTTACAGCACCAAGAGCATTGGAGAAGTGCAAGAACAGAAACTGAACTACTAATAGATTTTAATTTTTTTtATTTTGTGAAATAATAATAATAGTAGTAATTATTGTTATTACTATTTACTGTCATTTGGTAGGGTTGCAATTAATTGTTATGTCCAATTGATGATCATATATCAAACTCTACTCTATAGAGGGAGGGAGTTTGATTTTGATATGTAACATATCACCTTCTGTCGATGTAATTACTATATAAATGAAATATATTTCTCACCAGA CTCATAACCCACTTTATAATTTCACACTTTCCCTTATTTTCTCCTCCTCCCCTCCATAACCACTCCTTTTCCCCATTCTTTCACCTCCAAAAATTAAAACAAAACAATACAAAAATATTGAGATTGTGAAGATACTCAAAATGGGAAGCTTACTTGGGTTTGAAGAGACAGAGCTCCGTCTTGGTCTGCCCGGCGGGGACGGAAGAAACGATGGCGACGCCGTGAAAAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATATTGTGACTGATTCCAACCAAGGCAACAAAACGACCGACAAAAATGTCGTTTCGAGCTTCGTCAATAAAGATCTTCCGAAGCCTCCTCCGGCCAAGGCGCAGGTTGTGGGTTGGCCACCGGTAAAGTCGTTGAGGAGAAACATCGTAGGGCCGCCAAAGAAGAATAAATTAGAAGAAACCGAGAAGAACGCCGTCATAAGCGGCGGTGGCTGTAGCGTCGGTGCGGCAGCGTTTATCAAAGTCAGTATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGTAGCTACCAAGAGCTTTCCGATGCCCTACGCAAGATGTTTGCCTCTTTCACTGCAGGTCAGTGTGGAGCACAAAAGATGAGGGATTACATGAATGAAAGAAAATTAATAGATGTGTCAAATGGGTCTGATTATGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTGTTGGAGATGTCCCATGGGACATGTTTGTGGATTCGTGCAAACGCTTGAGAATAATGAAAGGATCTGAAGCCATTGGACTTGCACCAAGAGCATTGGAGAAGTGCAAGAACAGAAACTGAACTACTAATAGattttaattttttttattttgtgaaataataataataGTAGTAATTATTGTTATTACTATTTACTGTCATTTGGTAGGGTTGCAATTAATTGTTATGTCCAATTGATGATCATATATCAAACTCTACTCTATAGAGGGAGGGAGTTTGATTTTGATATGTAACATATCACCTTCTGTCGATGTAATTACTATATAAATGAAATATATTTCTCACCAGA ATGGGAAGCTTACTTGGGTTTGAAGAGACAGAGCTCCGTCTTGGTCTGCCCGGCGGGGACGGAAGAAACGATGGCGACGCCGTGAAAAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATATTGTGACTGATTCCAACCAAGGCAACAAAACGACCGACAAAAATGTCGTTTCGAGCTTCGTCAATAAAGATCTTCCGAAGCCTCCTCCGGCCAAGGCGCAGGTTGTGGGTTGGCCACCGGTAAAGTCGTTGAGGAGAAACATCGTAGGGCCGCCAAAGAAGAATAAATTAGAAGAAACCGAGAAGAACGCCGTCATAAGCGGCGGTGGCTGTAGCGTCGGTGCGGCAGCGTTTATCAAAGTCAGTATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGTAGCTACCAAGAGCTTTCCGATGCCCTACGCAAGATGTTTGCCTCTTTCACTGCAGGTCAGTGTGGAGCACAAAAGATGAGGGATTACATGAATGAAAGAAAATTAATAGATGTGTCAAATGGGTCTGATTATGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTGTTGGAGATGTCCCATGGGACATGTTTGTGGATTCGTGCAAACGCTTGAGAATAATGAAAGGATCTGAAGCCATTGGACTTGCACCAAGAGCATTGGAGAAGTGCAAGAACAGAAACTGA MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVSSFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVGAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVSNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRALEKCKNRN*
BLAST of Cucsa.291640.1 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75 Identity = 148/245 (60.41%), Postives = 179/245 (73.06%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 266.9 bits (681), Expect = 2.1e-70 Identity = 146/239 (61.09%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 5.1e-69 Identity = 141/244 (57.79%), Postives = 170/244 (69.67%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68 Identity = 147/255 (57.65%), Postives = 176/255 (69.02%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 255.8 bits (652), Expect = 4.8e-67 Identity = 144/243 (59.26%), Postives = 174/243 (71.60%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TrEMBL
Match: A0A0A0M3H6_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G690240 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 3.5e-133 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TrEMBL
Match: A0A061F988_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 5.8e-80 Identity = 161/241 (66.80%), Postives = 188/241 (78.01%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TrEMBL
Match: A0A067JIG3_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 7.6e-80 Identity = 159/244 (65.16%), Postives = 188/244 (77.05%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TrEMBL
Match: B9I5F9_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0013s03870g PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.8e-79 Identity = 160/241 (66.39%), Postives = 187/241 (77.59%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TrEMBL
Match: B9SZ69_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78 Identity = 156/247 (63.16%), Postives = 183/247 (74.09%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16) HSP 1 Score: 284.3 bits (726), Expect = 7.1e-77 Identity = 148/245 (60.41%), Postives = 179/245 (73.06%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14) HSP 1 Score: 266.9 bits (681), Expect = 1.2e-71 Identity = 146/239 (61.09%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7) HSP 1 Score: 262.3 bits (669), Expect = 2.9e-70 Identity = 141/244 (57.79%), Postives = 170/244 (69.67%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-68 Identity = 144/243 (59.26%), Postives = 174/243 (71.60%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. TAIR10
Match: AT5G65670.1 (AT5G65670.1 indole-3-acetic acid inducible 9) HSP 1 Score: 203.4 bits (516), Expect = 1.6e-52 Identity = 115/227 (50.66%), Postives = 146/227 (64.32%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. NCBI nr
Match: gi|449449553|ref|XP_004142529.1| (PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus]) HSP 1 Score: 482.3 bits (1240), Expect = 5.0e-133 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. NCBI nr
Match: gi|659125485|ref|XP_008462706.1| (PREDICTED: auxin-responsive protein IAA16-like isoform X1 [Cucumis melo]) HSP 1 Score: 414.1 bits (1063), Expect = 1.7e-112 Identity = 205/236 (86.86%), Postives = 217/236 (91.95%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. NCBI nr
Match: gi|659125487|ref|XP_008462707.1| (PREDICTED: auxin-induced protein AUX28-like isoform X2 [Cucumis melo]) HSP 1 Score: 352.4 bits (903), Expect = 6.0e-94 Identity = 174/204 (85.29%), Postives = 185/204 (90.69%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. NCBI nr
Match: gi|590642617|ref|XP_007030567.1| (Indoleacetic acid-induced protein 16 [Theobroma cacao]) HSP 1 Score: 305.4 bits (781), Expect = 8.4e-80 Identity = 161/241 (66.80%), Postives = 188/241 (78.01%), Query Frame = 1
BLAST of Cucsa.291640.1 vs. NCBI nr
Match: gi|802758414|ref|XP_012089266.1| (PREDICTED: auxin-responsive protein IAA16 [Jatropha curcas]) HSP 1 Score: 305.1 bits (780), Expect = 1.1e-79 Identity = 159/244 (65.16%), Postives = 188/244 (77.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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