Cucsa.283130.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACCTACCTTCGCGCTGAAGCCGCCGGCCGCCTTTCTCCGCCATTAACACCAAACTCCGAAATATAACAAAGCTTTCATCTCCATGTCTCTCTCTATTTCCTTCCTTAATTCTTCTCTCTCCCTCTCCCTTTCCCCTCCCCATGCCCTCTCTCCCCCTCCTCCCTCTTCCATGTCTCTCATCCGCCGCTTGACGCCCGGACATCTCAGATTCAACCTCCGACATCACGCCGGCCGATTCGCTACCGCCGCCGCTGCTGCCGTACGCCAGGACACCGCTGCTTGGACCCAAGCTCCTCTCGCCGAAGTCGAGCCTGCCGCTGAATCTCTATTTCACGTTTCCATAGACGTGTCCGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGACAGTACCTGCAGCTTCGCGTCCCCGACGTGGAGAAACCGACGTTTCTTGCTATTGCGTCTCCTCCGCTACTTGCCTCTGCGGAAGGCGTGTTCCAGTTTTTGGTGAAAAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTGCAACTTAGTCAGGTCATGGGGAAGGGATTCGATGTTGATCAAATCGCGCCGCCTCAAGATTTCCCTAGCGTTTTCATTTTTGCCACTGGATCTGGAATCAGGTGCGCCCTCTCTTTCTCGTTTTAGAAGCTCATTCTCCTTTAGCTCAACGTGTTCCGGCATGCTTTGTTTTCTAGTTTTAGGTTCTTTGTTAATTTTTCTCAGACTTATGGACATGTTTCTCGAACAAGTATGATCGAGTTAGAATCAGAAGATTTCGAACCAAAGTCAATATGTGTAGGCACAGCAAGGTTACATGTTGATCTGGGTTTCTTTAGCTTTAGCTTCTGTGTAGAAAATAGAAATGAAAAGGTGGTGATTTTGAGTTGCTTGTTAAGGTCAGGGCAGTGCGCTTTGAGTTGGACACCATGGCAACCGTTTGTAATTGAATTTTCTTAGCATGGAATTCAGATGTTCATTAGGTCCCTCGAGAAAACTACCATAGAAATGGAGTGGTTTACAATTTTCATCTTCTATAATTCTGAAGTGTTCAAACAGTGGTTAAACGCAAAAGCCATTGATGCCAAGCCAAATAGATTTTCTCGTAAAAATGGAGTGTATGTTTGAAATGAGATCGAGATTAACATTGCAATCCTATTCCTACCTTTGCATTGTTTGCAAGCATACGTCTGAGCGAGCAGAAAGTTTTTGAAACCAATATTGTCGGAGGGACTATTCGAATTAAATAGTTTGGACTCGGCTGAACATAGCTTCTGTGCAGTGTTCACTCACAAGAATATTAAATAATCGTTTTTGTTCTCTGAAAGTTTGAGAAAATTCAATGAAGTGTGCTTGCTCAAGGCAAAAGTTGCTTGTTTTTTGTAACTTGATTCGAAGTTGCTAGTTCAATTCACAAGCAGGTGAAAAGTTGAACTTCACTTTTTTCAGTTTGGAATGCAGTTTTAGTTAGTAGTTTCTTAGAGCATTTTTAGTATGTGATTAACTTTCTACTTTTCATTATAAATGGAGGTTTTCTTATAGAATACAGTTTTAACTAGTTAGTAGTTTCTTAGAGCATTTTCAACATTTTTTATTAACAATTGAATCTTCATTAAAATGTCTTAAGTTAGAATATGTTTCCTTTTGAAGTTCAACTGGAATTAGGATTTTATACTTTTGTTTTTCATGGTTGGTTATATATCAGTCTTAAATAAGGCCCCTTTCCCCTCGCCTGTGGTGTTGTTCCCAGTTTGTTGTGTTCATTAGATGTGATTATGTGTGTAATGAAGCGTGGAATGGTACCTGTCTGCCCTCCAATCCCCCAGGAGGAGTTTGTGACACTTTATAACCTTATTTTTGTTTTTCAAATGGTCATATTCACTTAGCATTTTGATTTTTTTGTTGTTCATCATTGGTCATTGGCTTTTTATATCAAATATAATTTATCCTGTGCTCTCCTTATATATAGAATGTGATGGTTATAGGTATTGTTTTTCATTTGCTTTATAGGTCCGGTACCCTTGTGGTGTATTCCTTAGCTGTAGGATATGACAATGCTACACTTTCGTTTCATTTGATTTGATTTGATTTGTAACAGATTGATATTGAACTATTATCTCTACTGCCTTCAAAATTTACTTCTCTTATTTCATTATTTATTTGAACATTTTCAAGTACACAGCCACACACGTATACATCAGAGTGTTGCTCAGCTAATGTATATATGTGAACCAAATCGCACGGTCAAAGAACTTGGAATATGTTATTGTAAGCTGAATCGGACCATACTGATTAGAAATAACTTTTAGAGTTTCCCCACTTTCCGTTTGCTTTGCTGGTCTAACTATTTGTTTTCCCTTTTTTTGTAGTCCAATACGATCACTAATTGAGTCAGGCTTCGGTGCTAGTAAGAGGACTGATGTGAGGCTATATTATGGGGCAAGAAACCTCAAAAGAATGGCTTATCAGGTCTATGTTTTTTCTTTTTGCATTGCGGCTTACCATCTACAGAACAAGAACTATGAAATTCATTTGTTTCTTCCTTCTATAGGATAGATTTGACGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCAGTATTGTCACAACCTGAGAGTGATTGGACCGGTGACAGTGGCTATGTCCAGGTAGGCCTGACCTTAGACGTCTCTCTGTCCTTGTCAAATTCTGTTGAAATTGTAGGAATTTGGGTTAATAGAGTTTTTTTTTTCTTGTAGGCTGCCTTCAGTAATGCCAAGAAAGCTTTTGACCCTCTATCGACAGGTGCTGTAATCTGTGGTCAGAAACCGATGACTGAGGTACTCTCTTTGTCATGGTTATAGTCACTATTTTCTTGGTTCTTGGTTATTTTATTATTATTATTATTATTATTTTCGTTATTTCCTGTGCTTTCATTAGAAAAATAGAAGACTACAGAAGGCATACATAAACCAAACCTGAAGGAGCCCAAAACAAATTATAAAATAACTCCAATCCAAAAGAACAAAGCCAATATCATAATTGCAAACCATCAAACCTATCTACCTCTCAACCCTCCCTAAAAGTTCAATGATGTATGTGAATTGTGCTAGAAACCCCTACCCACATCATTTGTCTACAAATTTCAACCTTTTATGCTTATCGAAATCTAAAATTTTGGACACACTAGCATACTAGTTGTAGTGCTATTATACGATTTGATACTCCAGCACTAGATTCTTGAAATCACCATTTGTTCTGCTTGTATAGTATGTTTTCATGGTAAACTGCATCTGCTATTGGTTGTTAATGAACGACCTAGTGGAGGAACCATTCAGTTGAGAAAATAATTGACGAGTAATTTGTGTTATATCCCGACTAAATAGATTATATCTGAATCAAACACTTCGTTTCTCTTATCGATTTTGCAGGAAGTTACGTCAATTCTTGTAGCAGATGGAGTCTCTAGTGAGAAGATACTAAAGAATTTTTGAACAAGCAGAAAGAGAATAGTATTGTTGTATCATCAATTTGGTCAGAGATGTTTATAATCATTTTTTCATCCTACTGCTGAGGGTAAGCACCTCAGCTCGGACAAGCAATAAATGTATTATGGAGACTAGAAAACACTATTTATGTCCAAATTTTTCAGGACTGACGCGGCTAAGTTATAGGACTCTTACCTCCCATATGTTCTATTCTGGAGGACCTGTTCACTTGTACGGTTAGAAATTCCTTCGAACTATATAATTGGCGATTAAAATTTTCTATTTTTGATGATTCGATTATAGCCGGAAAATGGCATTATCATCTCGATTATGATACCATGCCAGCTTTATTTTACTGGTCTATTTACAATTGTCGATTGGTATCCAACATATCATTAGAT CAACCTACCTTCGCGCTGAAGCCGCCGGCCGCCTTTCTCCGCCATTAACACCAAACTCCGAAATATAACAAAGCTTTCATCTCCATGTCTCTCTCTATTTCCTTCCTTAATTCTtctctctccctctccctttcccctccccatgccctctctccccctcctccctcttccATGTCTCTCATCCGCCGCTTGACGCCCGGACATCTCAGATTCAACCTCCGACATCACGCCGGCCGATTCGCTACCGCCGCCGCTGCTGCCGTACGCCAGGACACCGCTGCTTGGACCCAAGCTCCTCTCGCCGAAGTCGAGCCTGCCGCTGAATCTCTATTTCACGTTTCCATAGACGTGTCCGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGACAGTACCTGCAGCTTCGCGTCCCCGACGTGGAGAAACCGACGTTTCTTGCTATTGCGTCTCCTCCGCTACTTGCCTCTGCGGAAGGCGTGTTCCAGTTTTTGGTGAAAAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTGCAACTTAGTCAGGTCATGGGGAAGGGATTCGATGTTGATCAAATCGCGCCGCCTCAAGATTTCCCTAGCGTTTTCATTTTTGCCACTGGATCTGGAATCAGTCCAATACGATCACTAATTGAGTCAGGCTTCGGTGCTAGTAAGAGGACTGATGTGAGGCTATATTATGGGGCAAGAAACCTCAAAAGAATGGCTTATCAGGATAGATTTGACGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCAGTATTGTCACAACCTGAGAGTGATTGGACCGGTGACAGTGGCTATGTCCAGGCTGCCTTCAGTAATGCCAAGAAAGCTTTTGACCCTCTATCGACAGGTGCTGTAATCTGTGGTCAGAAACCGATGACTGAGGAAGTTACGTCAATTCTTGTAGCAGATGGAGTCTCTAGTGAGAAGATACTAAAGAATTTTTGAACAAGCAGAAAGAGAATAGTATTGTTGTATCATCAATTTGGTCAGAGATGTTTATAATCATTTTTTCATCCTACTGCTGAGGGACTGACGCGGCTAAGTTATAGGACTCTTACCTCCCATATGTTCTATTCTGGAGGACCTGTTCACTTGTACGGTTAGAAATTCCTTCGAACTATATAATTGGCGATTAAAATTTTCTATTTTTGATGATTCGATTATAGCCGGAAAATGGCATTATCATCTCGATTATGATACCATGCCAGCTTTATTTTACTGGTCTATTTACAATTGTCGATTGGTATCCAACATATCATTAGAT ATGTCTCTCTCTATTTCCTTCCTTAATTCTTCTCTCTCCCTCTCCCTTTCCCCTCCCCATGCCCTCTCTCCCCCTCCTCCCTCTTCCATGTCTCTCATCCGCCGCTTGACGCCCGGACATCTCAGATTCAACCTCCGACATCACGCCGGCCGATTCGCTACCGCCGCCGCTGCTGCCGTACGCCAGGACACCGCTGCTTGGACCCAAGCTCCTCTCGCCGAAGTCGAGCCTGCCGCTGAATCTCTATTTCACGTTTCCATAGACGTGTCCGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGACAGTACCTGCAGCTTCGCGTCCCCGACGTGGAGAAACCGACGTTTCTTGCTATTGCGTCTCCTCCGCTACTTGCCTCTGCGGAAGGCGTGTTCCAGTTTTTGGTGAAAAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTGCAACTTAGTCAGGTCATGGGGAAGGGATTCGATGTTGATCAAATCGCGCCGCCTCAAGATTTCCCTAGCGTTTTCATTTTTGCCACTGGATCTGGAATCAGTCCAATACGATCACTAATTGAGTCAGGCTTCGGTGCTAGTAAGAGGACTGATGTGAGGCTATATTATGGGGCAAGAAACCTCAAAAGAATGGCTTATCAGGATAGATTTGACGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCAGTATTGTCACAACCTGAGAGTGATTGGACCGGTGACAGTGGCTATGTCCAGGCTGCCTTCAGTAATGCCAAGAAAGCTTTTGACCCTCTATCGACAGGTGCTGTAATCTGTGGTCAGAAACCGATGACTGAGGAAGTTACGTCAATTCTTGTAGCAGATGGAGTCTCTAGTGAGAAGATACTAAAGAATTTTTGA MSLSISFLNSSLSLSLSPPHALSPPPPSSMSLIRRLTPGHLRFNLRHHAGRFATAAAAAVRQDTAAWTQAPLAEVEPAAESLFHVSIDVSDAPDLAASHTRAGQYLQLRVPDVEKPTFLAIASPPLLASAEGVFQFLVKSVEGSIAELLCGLKKGDVVQLSQVMGKGFDVDQIAPPQDFPSVFIFATGSGISPIRSLIESGFGASKRTDVRLYYGARNLKRMAYQDRFDEWESSGVKVVPVLSQPESDWTGDSGYVQAAFSNAKKAFDPLSTGAVICGQKPMTEEVTSILVADGVSSEKILKNF*
BLAST of Cucsa.283130.2 vs. Swiss-Prot
Match: K502_ACTDE (Fruit protein pKIWI502 OS=Actinidia deliciosa GN=pKIWI502 PE=2 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.0e-74 Identity = 151/311 (48.55%), Postives = 204/311 (65.59%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. Swiss-Prot
Match: DMPP_ACICP (Phenol hydroxylase P5 protein OS=Acinetobacter calcoaceticus (strain PHEA-2) GN=mphP PE=1 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 55/199 (27.64%), Postives = 98/199 (49.25%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. Swiss-Prot
Match: NQRF_PSEA6 (Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=nqrF PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 55/167 (32.93%), Postives = 79/167 (47.31%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. Swiss-Prot
Match: XYLA_PSEPU (Xylene monooxygenase electron transfer component OS=Pseudomonas putida GN=xylA PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.2e-07 Identity = 55/227 (24.23%), Postives = 96/227 (42.29%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=MCR1 PE=3 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-06 Identity = 46/189 (24.34%), Postives = 76/189 (40.21%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TrEMBL
Match: A0A0A0KR83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611610 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 1.6e-167 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TrEMBL
Match: B9HWA1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12670g PE=4 SV=2) HSP 1 Score: 438.3 bits (1126), Expect = 7.4e-120 Identity = 220/299 (73.58%), Postives = 250/299 (83.61%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TrEMBL
Match: M5XEN9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009307mg PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.2e-117 Identity = 222/304 (73.03%), Postives = 256/304 (84.21%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TrEMBL
Match: A0A067KRS5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09278 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 3.8e-116 Identity = 212/302 (70.20%), Postives = 251/302 (83.11%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TrEMBL
Match: A0A059D6S5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02879 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 8.5e-116 Identity = 218/305 (71.48%), Postives = 245/305 (80.33%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. TAIR10
Match: AT1G15140.1 (AT1G15140.1 FAD/NAD(P)-binding oxidoreductase) HSP 1 Score: 380.6 bits (976), Expect = 9.3e-106 Identity = 190/296 (64.19%), Postives = 237/296 (80.07%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. NCBI nr
Match: gi|449434568|ref|XP_004135068.1| (PREDICTED: fruit protein pKIWI502 [Cucumis sativus]) HSP 1 Score: 596.7 bits (1537), Expect = 2.3e-167 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. NCBI nr
Match: gi|659091687|ref|XP_008446679.1| (PREDICTED: fruit protein pKIWI502 [Cucumis melo]) HSP 1 Score: 538.5 bits (1386), Expect = 7.6e-150 Identity = 269/281 (95.73%), Postives = 278/281 (98.93%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. NCBI nr
Match: gi|743889291|ref|XP_011038702.1| (PREDICTED: fruit protein pKIWI502-like [Populus euphratica]) HSP 1 Score: 444.5 bits (1142), Expect = 1.5e-121 Identity = 222/299 (74.25%), Postives = 253/299 (84.62%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. NCBI nr
Match: gi|566190492|ref|XP_002315901.2| (hypothetical protein POPTR_0010s12670g [Populus trichocarpa]) HSP 1 Score: 438.3 bits (1126), Expect = 1.1e-119 Identity = 220/299 (73.58%), Postives = 250/299 (83.61%), Query Frame = 1
BLAST of Cucsa.283130.2 vs. NCBI nr
Match: gi|596176399|ref|XP_007223200.1| (hypothetical protein PRUPE_ppa009307mg [Prunus persica]) HSP 1 Score: 431.0 bits (1107), Expect = 1.7e-117 Identity = 222/304 (73.03%), Postives = 256/304 (84.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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