Cucsa.259970.3 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCCAAATTCAAAGAACAGAACGAACCGAACAATGCAATCGCCTTCTCTTCGTTTCCCTCCTACCAAACTTCACATCTTCCATCACTTTGTAGGACTTCACTTCACTTCCATTCCCACTAAATCCTTCTTTCCCTCTTCTCTCTTCATTTCCAATTTTCGTTCCATTCCAATACAGTCCCAAAGCAAACCCCACAACCGCAATTCAAGTCCTAAACCTAAACATGGAACTACCAGACTCAAGGGTAACAAAGAAAATGTATGGAGCCTGGATAACGAGCTCGCCAAGCCCCAAAAACAGGGGGATAGAGCAACCAGGAGGAACCCCAAAGGTAGAAGGGTCATTAAAAGGAAGAGGAATAAAGGTGGCACAATTCTGGTTTCTGGTGCTATGCTAATGGAGGTCGAAACCGTTCTTCAAACTCAGGTACTCTCTACCCTCGCTGCTTATTTGTTCACTTGATTCGGTTTCAATTTAATCTCCTACCTCATAGCGCCATGATTCTGTAATACTATCAGGAACCTGTAATTAAGCCAAATTGGAATACATTTGTTAGCAGTGTGAGTGGAATATGGAAAGGGGTGGGCGCCGTATTTTCTCCTATCACTGCAGAAATGGAGCCAATTGAAATTGGAAGCAACAATGAAAACCTATATGATTGCTATACTCTTTCTTGCGTTGACAACGAGCGGCTTTTATCTGGAGAGCAGACCAATCATATTAAAAGAAGAGTAAATTGGGTGACCTTAAATCCTTACGGGGAAACACCCCTAAACCCTGGAGATGTTTCCTCAACCTCTGAAACAATGGTAGGCAGAAGCCCGAAAAGTTACCGTTTGCCAAGTTTCGAGTCTTTTAATTTTGATAAAAGTGACGTGCTGGAAGAAGATGTTATGGGAAATGAGCCCGGCCTTGTCTTCTTTGAGGTATGGTTTCTTACCTTTGCTTGATTGATCCATAGATTATGTTTGTCAAATTGTGCTTATTAAGACATTGATGGTTATTTAAGCTTCTACACTTTTATCATCTTTTGTTGCACTTGTACTGGTTGAGAAAGTATCACAAGAGAAAACTTGGGATACTACTATCAGCATGTTTTATCGATCTCTCTTGAGTGTCGGAAGTATTTCCTCGGTTGGGTATCATCTGGTGAACATTGATCTCATTTCTAATCGGAACCAAAACACAATCTCAACTTCATTGAAAGGTAAATGGCAAAAACTTACGAGGTAGCCAAGGAAATTGGATCTTCCCCTCTTGAGATCTCACTCAGGCCCAAATATCATAACATAACAATCTCCCAAACTAATATACTCTTAATAACCTTATAACATGCCAGTACCATTAAATATCATAACATAACCACCTCCCAAACTAATTACTAATATACTCTGTCCTCGTAACACTCTTAATACCATTTCTATTAATGTCTCTGGTCTATGTTGTTCAATTTTACTTATTAATTTCATATAAACCATAGATACAAATTGTCCGTGTCAGTTTACATGCACTTTTGACTAATTCAATTTGTACCTTAATGAATGAAAGTACATGAAGTAATAACATTTTTGTAGCTTTTGGGCATTTTCGTTATCCATTTTAATCGCAATGTTTTGTCCGAATGACAAAAGTATTGGTTAACATTATTATGTCTCTATTTCTGTTCAAACTAATGCCATCATATGACGATCTCATTGGGAAAAAAAATTCCAGGATGGATCCTATTCTCGTGGTCCTGTTAACATTCCTGTGGGAGATGTTGATGATACCAATTATTACATAAATCCAACTTTGAAGTTCGAACAGGTAAGTTAAGTTTGTAAACTGCATTATTGCTACTTCATATATCTACTTGTTTTAAGATGACCTTGTCTCTTTGTTTTTTATCAAGTTCAAGGTGAGTTCTTTTTTTTTCCCCTTTTCTTTCTCTCTTTTTGATAGAAAGCAATATGACATATTGCCCGACAGAAGATGTACAAAAAGGAGGTGAGATATTCCTAGAAAGCCAAGGTGATTATAGAAAGATTCTTTGTGCAAATATGCAATCGAACTCTATCCATAGAGTTCTGTGAGTCAACCTGTTGAAAATTCCTTTTTTTCCTTTCAAACCACAATCTTCAAACGAGAGCCACCCCTGAGAAAAGGATTCCAGCATCGCCAAAAAAGAATGTTCTGGAGATGAGTTGGAGGATGGTTCAACTGTTATTAGGAGAAGCCCATTAAAGATTGAAGCATCTATTAGCGGAAGCATATTAACAGAAGAACAATAGGAATGTACCACACTCACTATCTTTGCACAAAAACACCAGCGACTGAGACAAAGAAACTGTTGACATTCTTTTTAGCATTTGTGCAGTATATATTGATTATTAAGCATCTCCGGAACAAAAATTCAAAGGATAAATTTTACCTTCTTGTAGACTCTAGATTTCCTTATGATAATAACAATTCTTTATTGGACCATTCCTCAATCTCTAAATCATAGGAGACTTCCTTCAAAGTTTAAGATACCAGTAAGCAGAGTGCAACTGTCTAGGAGAAGAATCTTCAGAAATTACCACTCTTTAGAATCTAGGGGAAGCAAAACTGTAGCATCATGAACTGCGGTGCACTATTTCTTGTTATTTACGAACTAGAACTTGAGGCTACTATGCAATATTTACACATGGGCAGGGAGTTCATGTTTTCTCTATACGAACTGGTACACCCGTTCATGATGCTAAAATTGAGGTTATCTTGGTCAATCCGAAATTTCTCTTCTCTCTTCATGTCCTTGATTATCTCCTTTCTTTCCCTTGGCCTCTCTATCTTGTCTCCCTTCCCCCATTTTGGTTCTTTTGCCGTCCTGCAAGCTCTAGGCTGGAACTGCATGTGCTATTTTGTGGTACTGAAAAAAATAGTTATTTAAGTCAACAATGTCAAGAAAGTAGAGCAAGGATCTCTGAGATTGGAAATACATATATATGTACATATATATACAAACGTAACTTATTTAACATAACATATAGATACCTCAACAGGGTGCCTCTATATAAAAAAAAAGAACCATGCACACCCTCTACTTAGTAGTCAATAGAAGCAAACATATTCATTTGAAGATACCAGTACACCTCAGACCTTACAACCAACAATCTTCTAAAGCTCACTCACTGCCTTGTCTAAGATCCCTAACTTAGCTTGAAGGATGGATTGTCTTAAAGGGTCAGTCTAATCCTGATCCTGATATGAGGTGGACTTCTACTTAGACGGGGTCTGTGAACTACTGGTACACTCCAACTGAATGCGCTCAAGGGAAGGCAGTATCTCATAATCCTTCATCAAGTTCTTTTAGGCCATCCGCCTATTTCACACCCTATTCTTGCAAAGAAAGAACGACGACCACTACTACTACTAGTACTAGAAAGGGTCCAAGCGAAGCTAAGCAAGTCAGTGAGGGGTTTACTGGCCGTAAAGGGCGAACGGTACAAGAAGTCTTGTTCTTGTTCTTTCCCCTTTCGGGGTTGAATGGCCTTTCTGAAAAGTCAATTTCCTGGTATTTGGATTTTATCCGACCAGTAAATAAGAAATATGCCTCGCTATTGGGAACGAAACTAAGCAACGAAGCTACAACTAAAGCAACTACTGATGCTCCTGGGAGAGCAGTTCCTATTTTCATAGACTCCTTCAAGCCCGAATACCTAGTAACTAGCCCCGTGAACCCCAGATTCCTTTGAGAGTAGTTTGTCCTCGTTGGTTCTACTTCGAATTCCAAGCTGCCCTACTTTATAGTGCATGCTTCCTTGGATGAACTGACTATGCTCTCCATTTGTATCTTCTGTCTACGATTCTATCTTGTTGGCCAGTGTCACTTTAACAAATACCCACATTTATTTTGCAAATGGCCGGATCTTTGATAGTGGATGATTGCATCTAGGGTACACTCACTAAGCTTTGCGGTAAACTTAGTACGAATTCATGTGATTTTCAATGATAGTTGGGGAGTTTGCTGATATCTGGCCATGTTAGTGTTTAGTAAAAGGCTGCCATAAAAGGCTCCGGATCGTTCATACCATTGAATTCAGTGGTGGCGGGTCTGACATACAGATACTAAGAGTTGCTGTGTATGAAGAACAGTGGGTCAGTCCCTCAAATATGTCTGACATGAGGTTACCTTTTTTTTTTCTTTTCAAAAGGGCCTGGTTTTTCTGTTTCTATTATTCATTGGATTTAACAGTTAATATTTCACTCAATTGTTTTTCAAGTGGGAGAGTAAATATTAGTTCTCCCAAAAAAATGTTTGGATTGGATAATTAGGGGATGAGAATACTTTGATTTGTAAACAGTGACGTGGAGTTCGATTTGAAGCCATTTTCTCAACGGAAGCGAACTGATCCATCAGAACTGAGTGGGTCGTGGAAGGTGTTTGAAGTAAGCGGAACTCCAATTTTTGGTGAAGAGAGCAATGCAGGTTCTTATGTGTATCTGTGTACAGAAACCTTAAAGAAAAGGAGGTTGCCAGAAAACCCAGTTTACTTTGGGGAGGAAGAAGTGATGGACATGCAGGATGTTACGATGCTGTGGCTTCCAGGTGGTGTCACTGCTTACGTTGATGTCAAAAATGATGGCATTCTCTGTATCGGAGTCGGTTGGTACTCCGACGAAGGTATCAACCTTGTTATGGAGAGGGACTATGGATCCGATGGAAACCTCAAGGAAGTAAGGTGGAAATCTGAATTAAAGAGAAGATGGCCTGACCCAATACCCCTTTGAATATTTTACTTTTTAAAAATTCAGGTGTATGTAAATAACAGAGTATACGATCTAAATCCATCCTCTTATTTCCATCAATTCCCATTCGCATTTCTATTTTATATATAAATATCGTGTACAAAAGCCAACAAAATAGAATTACCACTATCAACCGAATATTAGCCCTCTTTCCACCTTCAATACTTTAATACAACGGTTCAGGATTAATCTTTGCTCAAGGAACTCTTTTTCATTGATTTTAATTAGTTTGCTCTTTTCAAATGCCAGTTGAAATAAAATAAAATACAACAGATAACTCAGCAACATGAAGATCAATACAATTTCATATCTTCCGCACGCAAATAAAATCCAGAAGATGGAACTCCAAAAACAATAAAGATTCCAAATCTCCAATTTTGAATATTCATTCAGAAATCAAACACTGTTATACGATCGAGAATTCTCAGATACCCCAAAAAGCCTAAAAATGATTTCACAGTTTGGAGAAGTGCACATTCCTCAAATTGCACAGTAGGAATTTTGGCCGGTCTTTAAATTGGCTTGATCTTGAAGTGGAGTGAAATGAGAGAGAAGACAAAGCATTTCAGATCCTACAGCCAAAGAAAAGCATATATGACCCATGCGTAGAATCTGGAAATAGATATGGCTTAAAAGTAATCTACATGGAAGACTAAGCCTTACCTGAACAAGATAATAGAATATCCGCAATCCTTCAGGATCCTTGCTGCTCTGCACATCGACAAGAGATCCAATCTTAGACGTGGTGAAGGAGATATGCTCATTTCCCATCACAATCTCAAGCTCCTGTCGTCCAACCCGATCTGGTTCTGGCCAATTATTA GTCCCAAATTCAAAGAACAGAACGAACCGAACAATGCAATCGCCTTCTCTTCGTTTCCCTCCTACCAAACTTCACATCTTCCATCACTTTGTAGGACTTCACTTCACTTCCATTCCCACTAAATCCTTCTTTCCCTCTTCTCTCTTCATTTCCAATTTTCGTTCCATTCCAATACAGTCCCAAAGCAAACCCCACAACCGCAATTCAAGTCCTAAACCTAAACATGGAACTACCAGACTCAAGGGTAACAAAGAAAATGTATGGAGCCTGGATAACGAGCTCGCCAAGCCCCAAAAACAGGGGGATAGAGCAACCAGGAGGAACCCCAAAGGTAGAAGGGTCATTAAAAGGAAGAGGAATAAAGGTGGCACAATTCTGGTTTCTGGTGCTATGCTAATGGAGGTCGAAACCGTTCTTCAAACTCAGGAACCTGTAATTAAGCCAAATTGGAATACATTTGTTAGCAGTGTGAGTGGAATATGGAAAGGGGTGGGCGCCGTATTTTCTCCTATCACTGCAGAAATGGAGCCAATTGAAATTGGAAGCAACAATGAAAACCTATATGATTGCTATACTCTTTCTTGCGTTGACAACGAGCGGCTTTTATCTGGAGAGCAGACCAATCATATTAAAAGAAGAGTAAATTGGGTGACCTTAAATCCTTACGGGGAAACACCCCTAAACCCTGGAGATGTTTCCTCAACCTCTGAAACAATGGTAGGCAGAAGCCCGAAAAGTTACCGTTTGCCAAGTTTCGAGTCTTTTAATTTTGATAAAAGTGACGTGCTGGAAGAAGATGTTATGGGAAATGAGCCCGGCCTTGTCTTCTTTGAGGATGGATCCTATTCTCGTGGTCCTGTTAACATTCCTGTGGGAGATGTTGATGATACCAATTATTACATAAATCCAACTTTGAAGTTCGAACAGTAAAAGGCTGCCATAAAAGGCTCCGGATCGTTCATACCATTGAATTCAGTGGTGGCGGGTCTGACATACAGATACTAAGAGTTGCTGTGTATGAAGAACAGTGGGTCAGTCCCTCAAATATGTCTGACATGAGTGACGTGGAGTTCGATTTGAAGCCATTTTCTCAACGGAAGCGAACTGATCCATCAGAACTGAGTGGGTCGTGGAAGGTGTTTGAAGTAAGCGGAACTCCAATTTTTGGTGAAGAGAGCAATGCAGGTTCTTATGTGTATCTGTGTACAGAAACCTTAAAGAAAAGGAGGTTGCCAGAAAACCCAGTTTACTTTGGGGAGGAAGAAGTGATGGACATGCAGGATGTTACGATGCTGTGGCTTCCAGGTGGTGTCACTGCTTACGTTGATGTCAAAAATGATGGCATTCTCTGTATCGGAGTCGGTTGGTACTCCGACGAAGGTATCAACCTTGTTATGGAGAGGGACTATGGATCCGATGGAAACCTCAAGGAAGTAAGGTGGAAATCTGAATTAAAGAGAAGATGGCCTGACCCAATACCCCTTTGAATATTTTACTTTTTAAAAATTCAGGTGTATGTAAATAACAGAGTATACGATCTAAATCCATCCTCTTATTTCCATCAATTCCCATTCGCATTTCTATTTTATATATAAATATCGTGTACAAAAGCCAACAAAATAGAATTACCACTATCAACCGAATATTAGCCCTCTTTCCACCTTCAATACTTTAATACAACGGTTCAGGATTAATCTTTGCTCAAGGAACTCTTTTTCATTGATTTTAATTAGTTTGCTCTTTTCAAATGCCAGTTGAAATAAAATAAAATACAACAGATAACTCAGCAACATGAAGATCAATACAATTTCATATCTTCCGCACGCAAATAAAATCCAGAAGATGGAACTCCAAAAACAATAAAGATTCCAAATCTCCAATTTTGAATATTCATTCAGAAATCAAACACTGTTATACGATCGAGAATTCTCAGATACCCCAAAAAGCCTAAAAATGATTTCACAGTTTGGAGAAGTGCACATTCCTCAAATTGCACAGTAGGAATTTTGGCCGGTCTTTAAATTGGCTTGATCTTGAAGTGGAGTGAAATGAGAGAGAAGACAAAGCATTTCAGATCCTACAGCCAAAGAAAAGCATATATGACCCATGCGTAGAATCTGGAAATAGATATGGCTTAAAAGTAATCTACATGGAAGACTAAGCCTTACCTGAACAAGATAATAGAATATCCGCAATCCTTCAGGATCCTTGCTGCTCTGCACATCGACAAGAGATCCAATCTTAGACGTGGTGAAGGAGATATGCTCATTTCCCATCACAATCTCAAGCTCCTGTCGTCCAACCCGATCTGGTTCTGGCCAATTATTA ATGCAATCGCCTTCTCTTCGTTTCCCTCCTACCAAACTTCACATCTTCCATCACTTTGTAGGACTTCACTTCACTTCCATTCCCACTAAATCCTTCTTTCCCTCTTCTCTCTTCATTTCCAATTTTCGTTCCATTCCAATACAGTCCCAAAGCAAACCCCACAACCGCAATTCAAGTCCTAAACCTAAACATGGAACTACCAGACTCAAGGGTAACAAAGAAAATGTATGGAGCCTGGATAACGAGCTCGCCAAGCCCCAAAAACAGGGGGATAGAGCAACCAGGAGGAACCCCAAAGGTAGAAGGGTCATTAAAAGGAAGAGGAATAAAGGTGGCACAATTCTGGTTTCTGGTGCTATGCTAATGGAGGTCGAAACCGTTCTTCAAACTCAGGAACCTGTAATTAAGCCAAATTGGAATACATTTGTTAGCAGTGTGAGTGGAATATGGAAAGGGGTGGGCGCCGTATTTTCTCCTATCACTGCAGAAATGGAGCCAATTGAAATTGGAAGCAACAATGAAAACCTATATGATTGCTATACTCTTTCTTGCGTTGACAACGAGCGGCTTTTATCTGGAGAGCAGACCAATCATATTAAAAGAAGAGTAAATTGGGTGACCTTAAATCCTTACGGGGAAACACCCCTAAACCCTGGAGATGTTTCCTCAACCTCTGAAACAATGGTAGGCAGAAGCCCGAAAAGTTACCGTTTGCCAAGTTTCGAGTCTTTTAATTTTGATAAAAGTGACGTGCTGGAAGAAGATGTTATGGGAAATGAGCCCGGCCTTGTCTTCTTTGAGGATGGATCCTATTCTCGTGGTCCTGTTAACATTCCTGTGGGAGATGTTGATGATACCAATTATTACATAAATCCAACTTTGAAGTTCGAACAGTAA MQSPSLRFPPTKLHIFHHFVGLHFTSIPTKSFFPSSLFISNFRSIPIQSQSKPHNRNSSPKPKHGTTRLKGNKENVWSLDNELAKPQKQGDRATRRNPKGRRVIKRKRNKGGTILVSGAMLMEVETVLQTQEPVIKPNWNTFVSSVSGIWKGVGAVFSPITAEMEPIEIGSNNENLYDCYTLSCVDNERLLSGEQTNHIKRRVNWVTLNPYGETPLNPGDVSSTSETMVGRSPKSYRLPSFESFNFDKSDVLEEDVMGNEPGLVFFEDGSYSRGPVNIPVGDVDDTNYYINPTLKFEQ*
BLAST of Cucsa.259970.3 vs. TrEMBL
Match: A0A0A0L2W5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116770 PE=4 SV=1) HSP 1 Score: 614.8 bits (1584), Expect = 5.7e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. TrEMBL
Match: A0A067JY27_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14642 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 5.6e-88 Identity = 171/288 (59.38%), Postives = 212/288 (73.61%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. TrEMBL
Match: A0A0B2RZ28_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_045184 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 6.2e-87 Identity = 174/308 (56.49%), Postives = 219/308 (71.10%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. TrEMBL
Match: K7LV27_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G152700 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 6.2e-87 Identity = 174/308 (56.49%), Postives = 219/308 (71.10%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. TrEMBL
Match: B9SKK3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0658050 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84 Identity = 168/293 (57.34%), Postives = 206/293 (70.31%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. TAIR10
Match: AT2G44760.1 (AT2G44760.1 Domain of unknown function (DUF3598)) HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74 Identity = 151/264 (57.20%), Postives = 182/264 (68.94%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. NCBI nr
Match: gi|449431948|ref|XP_004133762.1| (PREDICTED: uncharacterized protein LOC101217788 [Cucumis sativus]) HSP 1 Score: 614.8 bits (1584), Expect = 8.2e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. NCBI nr
Match: gi|700201207|gb|KGN56340.1| (hypothetical protein Csa_3G116770 [Cucumis sativus]) HSP 1 Score: 614.8 bits (1584), Expect = 8.2e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. NCBI nr
Match: gi|659074741|ref|XP_008437771.1| (PREDICTED: uncharacterized protein LOC103483104 [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 2.9e-162 Identity = 282/298 (94.63%), Postives = 285/298 (95.64%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. NCBI nr
Match: gi|1012232724|ref|XP_015938822.1| (PREDICTED: uncharacterized protein LOC107464421 [Arachis duranensis]) HSP 1 Score: 347.1 bits (889), Expect = 3.2e-92 Identity = 189/318 (59.43%), Postives = 233/318 (73.27%), Query Frame = 1
BLAST of Cucsa.259970.3 vs. NCBI nr
Match: gi|802700437|ref|XP_012083714.1| (PREDICTED: uncharacterized protein LOC105643231 [Jatropha curcas]) HSP 1 Score: 332.4 bits (851), Expect = 8.1e-88 Identity = 171/288 (59.38%), Postives = 212/288 (73.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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