Cucsa.259790.4 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.259790.4
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	P53 and DNA damage-regulated protein 1
Location	scaffold02229 : 6142943 .. 6145629 (+)
Sequence length	1685

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAgAaaGAAAAaGAAAAaGACTTAAACTCTCTTCTTCACGCCGTCTCCTCCTCCTGTCTCTCAGCAGCTCCGCCGTCTCCTCCTCTCTCAGCAGCTCAGTGTCCCCTCGCTGCTGCATCTCTCCGGTTCGGTGCTGCCGGCTCTGTCCTGATTTTGGTTTTCTATTTATTTTATTGTTAGTTGTATTCCCTCAGCCTCTATCCATATATATCTATTTCGTCTTCCTGAAAGGGATTCTGAATTTCTAATTTTtCCTTCTTCCCTTCTTCTTTATTTCTTTACAATCAGTAATCTATGCCTTATTCTCAACTCTCTTTGATGCATAGTTTATACTAATTCTTTTGATTGTCCCAACAACCTTAACCTTGTTTGTATTTTTGGGTTTTAGTTGAACGAAGACAATTAGTATTTTTTTTtGTGTAAAAATCTTCTCCAATACAATTATTCAAATACCATTGATACTTTGAATTTATTGGAGTTAAAGAACATTCTATTCTTTGTACTTCATGGACTTCATATAGAAAGTTTAGAAAATATCTAGAAGGGCAGGGGTGAAAGGGACGGCCTAAAATTTCATCGTTTATAGCCATTTTTATTGATAGTATAGATGTTGTAGATATGGATGTAGATTACAAATATAGTCATAGAGAAAGAACGATCTTCTCAATACACAATTGAAGAGAAAACCGAACTGATTTACATTCAGTAATTGGTTAACTTTATCACAGAAAATTATTGTTTGAACCCTTTCTAGGTTTCTCAGCACTTCCTTCAATAGTAAATAATATTGTTTGCTGGAACTTGACAATCTCACTTTCTCTTAGTAATAACGTTTATGTTTTTCATATTTATTTTGGGAGGCTGAAAGATGACGATCTCTTTGTATTACATGTTTGGATGTTATGGATGATGGCTCAACGTGAATTTTAGGTTGGAATAAAATGAACGAGACTATGAGACAATTTCAACAAAGCTTAATAGAGCTAGAGGCTGAAGCTGAGCGTCTCCTCCTAGCCCGCGATGAAGTAAGCTTTAAAATATTAGAAGTTTGGCAACTTGGCTTACAAGATTACTTTTGTTTCCTACTTTCAATATACGTTTTGTATGGCAAAAAATTGGGATTGCGGTTTCACAATTTGTTTGTCATTGAAATGAAATTGTTCCGTAAGTTTGAGAAGTAAAAAGGTAAAGTGACCGTTGTTGTTTGGCATCAAAATGTCAGTTGGTTGAAAACGATAGAGTGAGGAATGGGAATAGAGAAGCATTGACTGCTTTGAGAAGGCGAGCGAGGACGACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGAGGGTGCTGAATCAAGGCCACTAGTGAAGGAGATTTGCACTACCTGTGGAAATCATGATTCTAATGAGCGCACTTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGGTTACTGTTGGGACACATTATTTTTtCTTCTAGTGCTGTTAATTTTATGCATTTATTCGTGCATGGCTCTTTAAGAAACAATCCGCTAAGATTTGTTAAAACATATGCAGTTTCATGTTCGTTCACATAACCTATTAATGGCTAAAGTAAAATCCTCAGAGCTTCGGGTTGAGTAATTTCATGGCAGTTCTTTGTCATTGTAATCTGCAGTGGCCAAACGGCTTCGCTTAAGTTGGATGAGGATGGGGCAAGAGCGGTGTGTGTATGCTATTTGTGGGTTTTGTGGAGATTTCCCTTGGGTTTGAAAACAAGATGGATTGTTCCCGACTCTATATGAATAATAAAAaGGAAACAAAGTATtATTTTTTTTTtAAACGAAGGACCCAATAGTTATGAGAAGTATATATGCATGCCTTGTTTTGAAATAATGAAGCTCCTTTCCCATTTTTAAGTGCCATACATATGGTTTGTTTGATTTTTTTTtCCTTAAAGAATACCATAGTCGGAAGCATTTTCTAGCTGGGAACAGTGATTTCATTCACTCGAACTTTGTAGAGCTTTCACTTTATTTTGACAGTTGAATTATTGTTTGTGGTTTGTATCTCTTTCACATGGCAGATCAGACGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTACGTAAAAGATCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTGGCTGACAAGATCAGTCCAGGGGTGCTCAAGGCAATGGTGACATTGACAGACAAACCCAAATGATTTTGCCCATCTTTTCCAATATGAATGAGGAGGTGGGAATTGAGTTCATCCAGGACCTTTTGTTGCTGTGACTTGGGATGGAGCACCGGTTCAGGTTCTCATTCAAGTGTTGAAAACTGACCCAAGTACATTCTTTTACACTTCTTACTGTATTCGACTATTCATTTAGTTGTCCATGCTGGTGGGTAGCCTTAGAATAGATAATAATACATACCTCCAAGTATTGTAATTTTACATCCACCTCTTTTTTtGGTACTACCAGCATGTAAGAATTTAGTCGAGCCGATGGGATTGTGGACTTCTCTGATTGTCTTATGAACACATTTGGATTATATTTGTTTAATTTTAAATGCTTTTGAGAAGCTTGTTTAAGAAAaGAAAATCAGTTCCATCTTGTATTTGATTGATTACAACGTTTAAGAAAAGAAA

mRNA sequence

AAAGAAAGAAAAAGAAAAAGACTTAAACTCTCTTCTTCACGCCGTCTCCTCCTCCTGTCTCTCAGCAGCTCCGCCGTCTCCTCCTCTCTCAGCAGCTCAGTGTCCCCTCGCTGCTGCATCTCTCCGGTTGGAATAAAATGAACGAGACTATGAGACAATTTCAACAAAGCTTAATAGAGCTAGAGGCTGAAGCTGAGCGTCTCCTCCTAGCCCGCGATGAATTGGTTGAAAACGATAGAGTGAGGAATGGGAATAGAGAAGCATTGACTGCTTTGAGAAGGCGAGCGAGGACGACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGAGGGTGCTGAATCAAGGCCACTAGTGAAGGAGATTTGCACTACCTGTGGAAATCATGATTCTAATGAGCGCACTTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGGTTACTGTTGGGACACATTATTTTTTCTTCTAGTGCTGTTAATTTTATGCATTTATTCGTGCATGGCTCTTTAAGAAACAATCCGCTAAGATTTGTTAAAACATATGCAGTTTCATGTTCGTTCACATAACCTATTAATGGCTAAAGTAAAATCCTCAGAGCTTCGGGTTGAGTAATTTCATGGCAGTTCTTTGTCATTGTAATCTGCAGTGGCCAAACGGCTTCGCTTAAGTTGGATGAGGATGGGGCAAGAGCGGTGTGTGTATGCTATTTGTGGGTTTTGTGGAGATTTCCCTTGGGTTTGAAAACAAGATGGATTGTTCCCGACTCTATATGAATAATAAAAAGGAAACAAAGTATTATTTTTTTTTTAAACGAAGGACCCAATAGTTATGAGAAGTATATATGCATGCCTTGTTTTGAAATAATGAAGCTCCTTTCCCATTTTTAAGTGCCATACATATGGTTTGTTTGATTTTTTTTTCCTTAAAGAATACCATAGTCGGAAGCATTTTCTAGCTGGGAACAGTGATTTCATTCACTCGAACTTTGTAGAGCTTTCACTTTATTTTGACAGTTGAATTATTGTTTGTGGTTTGTATCTCTTTCACATGGCAGATCAGACGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTACGTAAAAGATCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTGGCTGACAAGATCAGTCCAGGGGTGCTCAAGGCAATGGTGACATTGACAGACAAACCCAAATGATTTTGCCCATCTTTTCCAATATGAATGAGGAGGTGGGAATTGAGTTCATCCAGGACCTTTTGTTGCTGTGACTTGGGATGGAGCACCGGTTCAGGTTCTCATTCAAGTGTTGAAAACTGACCCAAGTACATTCTTTTACACTTCTTACTGTATTCGACTATTCATTTAGTTGTCCATGCTGGTGGGTAGCCTTAGAATAGATAATAATACATACCTCCAAGTATTGTAATTTTACATCCACCTCTTTTTTTGGTACTACCAGCATGTAAGAATTTAGTCGAGCCGATGGGATTGTGGACTTCTCTGATTGTCTTATGAACACATTTGGATTATATTTGTTTAATTTTAAATGCTTTTGAGAAGCTTGTTTAAGAAAAGAAAATCAGTTCCATCTTGTATTTGATTGATTACAACGTTTAAGAAAAGAAA

Coding sequence (CDS)

ATGAACGAGACTATGAGACAATTTCAACAAAGCTTAATAGAGCTAGAGGCTGAAGCTGAGCGTCTCCTCCTAGCCCGCGATGAATTGGTTGAAAACGATAGAGTGAGGAATGGGAATAGAGAAGCATTGACTGCTTTGAGAAGGCGAGCGAGGACGACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGAGGGTGCTGAATCAAGGCCACTAGTGAAGGAGATTTGCACTACCTGTGGAAATCATGATTCTAATGAGCGCACTTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGGTTACTGTTGGGACACATTATTTTTtCTTCTAGTGCTGTTAATTTTATGCATTTATTCGTGCATGGCTCTTTAA

Protein sequence

MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETGYCWDTLFFLLVLLILCIYSCMAL*

Homology

[Close]

BLAST of Cucsa.259790.4 vs. TrEMBL
Match: A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.4e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 203

[Close]

BLAST of Cucsa.259790.4 vs. TrEMBL
Match: W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-49
Identity = 95/117 (81.20%), Postives = 110/117 (94.02%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+ETM++FQQ L+ELE EAERLLLAR +LVEND+ RNGNREALTALR+RARTTK+S+ SP
Sbjct: 1   MDETMKEFQQQLVELETEAERLLLARHQLVENDKGRNGNREALTALRKRARTTKTSILSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIM+E+ G ESRPLVKE+C+TCGNHDS+ERTWMMFPGTDVFAR+PFHAAHTILET
Sbjct: 61  FESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTDVFARIPFHAAHTILET 117

[Close]

BLAST of Cucsa.259790.4 vs. TrEMBL
Match: A0A0B0NJQ5_GOSAR (Ribosome-recycling factor OS=Gossypium arboreum GN=F383_19391 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.5e-48
Identity = 94/117 (80.34%), Postives = 106/117 (90.60%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+E M+Q QQSLIELE EAE LLLAR +LVEND+VRNGNREALTALR+RARTTK+SVPSP
Sbjct: 1   MDENMKQLQQSLIELETEAEHLLLARHQLVENDKVRNGNREALTALRKRARTTKTSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FES+MK +    SRPLVKE+C TCGNHDSNE+TWMMFPGTDVFA++PFHAAHTILET
Sbjct: 61  FESMMKNIGNPASRPLVKEVCATCGNHDSNEQTWMMFPGTDVFAKIPFHAAHTILET 117

[Close]

BLAST of Cucsa.259790.4 vs. TrEMBL
Match: A5B5P8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040543 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-48
Identity = 94/118 (79.66%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+E+M+Q QQ LIE+E EAE +LLAR +LVENDRVRNGNREALTALR+RARTTK+SVPSP
Sbjct: 1   MDESMKQLQQGLIEIEIEAENVLLARHQLVENDRVRNGNREALTALRKRARTTKTSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETG 119
           FESIMKE+E  ESRPLVKE+C TCGNHDS E TW MFPGTDVFAR+PFHAAH+ILE G
Sbjct: 61  FESIMKEIEQLESRPLVKEVCATCGNHDSRENTWTMFPGTDVFARIPFHAAHSILEKG 118

[Close]

BLAST of Cucsa.259790.4 vs. TrEMBL
Match: K7L1B3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G109700 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-48
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+E M+QFQ+ L ELE EAE LLLAR +LVENDR+RNGNREALTALR+RARTTKSSVPSP
Sbjct: 1   MDENMKQFQKKLTELEVEAEHLLLARHQLVENDRLRNGNREALTALRKRARTTKSSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIMK V G+ SRPLV+E+CTTCG HDS+E+TWMMFPGTD+FAR+PFHAAHTILET
Sbjct: 61  FESIMKGVAGSSSRPLVQEVCTTCGKHDSSEQTWMMFPGTDLFARIPFHAAHTILET 117

[Close]

BLAST of Cucsa.259790.4 vs. TAIR10
Match: AT3G15351.1 (AT3G15351.1 unknown protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.0e-38
Identity = 69/111 (62.16%), Postives = 95/111 (85.59%), Query Frame = 1


Query: 6   RQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIM 65
           ++F   L ++EAEA+  LLAR+++VEND+ RN NREALTALR+RARTTK+SV SPF+S+M
Sbjct: 6   KKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMM 65

Query: 66  KEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILE 117
           K++ G+ ++PLV+E+C+TCG+HDS+E TWMM PG D+FA +PFHA HT+LE
Sbjct: 66  KDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLE 116

[Close]

BLAST of Cucsa.259790.4 vs. NCBI nr
Match: gi|449431974|ref|XP_004133775.1| (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET
Sbjct: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 117

[Close]

BLAST of Cucsa.259790.4 vs. NCBI nr
Match: gi|700201229|gb|KGN56362.1| (hypothetical protein Csa_3G117970 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 203

[Close]

BLAST of Cucsa.259790.4 vs. NCBI nr
Match: gi|659074783|ref|XP_008437793.1| (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLLAR+ELVENDRVRNGNREALTALRRRARTTKSSVPS 
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKSSVPSS 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 118
           FESIMKEV GAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET
Sbjct: 61  FESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILET 117

[Close]

BLAST of Cucsa.259790.4 vs. NCBI nr
Match: gi|694432402|ref|XP_009343559.1| (PREDICTED: uncharacterized protein LOC103935508 [Pyrus x bretschneideri])

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 102/129 (79.07%), Postives = 117/129 (90.70%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M++TM+QFQ+SLIELE EAE LLLAR+++VENDRVRNGNREALT+LR+ ARTTK+SVPSP
Sbjct: 1   MDDTMKQFQKSLIELETEAEHLLLARNQMVENDRVRNGNREALTSLRKIARTTKTSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETGYC 120
           FESIMKE+ G +SRPLVKE+C TCGNHDSNERTWMMFPGTDVFAR+PFHAAHTILETG+ 
Sbjct: 61  FESIMKEIGGPQSRPLVKEVCPTCGNHDSNERTWMMFPGTDVFARIPFHAAHTILETGFL 120

Query: 121 WDT-LFFLL 129
               LFF L
Sbjct: 121 SSCFLFFFL 129

[Close]

BLAST of Cucsa.259790.4 vs. NCBI nr
Match: gi|694376200|ref|XP_009364606.1| (PREDICTED: uncharacterized protein LOC103954500 [Pyrus x bretschneideri])

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 102/129 (79.07%), Postives = 116/129 (89.92%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+ETM+QFQ+SLIELE EAE LLLAR+++VENDRVRNGNREALT+LR+ ARTTK+SVPSP
Sbjct: 1   MDETMKQFQKSLIELETEAEHLLLARNQMVENDRVRNGNREALTSLRKIARTTKTSVPSP 60

Query: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETGYC 120
           FESIMKE+ G +SRPLVKE+C TCGNHDSNERTWMMFPGTDVFAR+PFH AHTILETG+ 
Sbjct: 61  FESIMKEIGGPQSRPLVKEVCPTCGNHDSNERTWMMFPGTDVFARIPFHVAHTILETGFL 120

Query: 121 WDT-LFFLL 129
               LFF L
Sbjct: 121 SSCFLFFFL 129

The following BLAST results are available for this feature:

BLAST of Cucsa.259790.4 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Z1_CUCSA	4.4e-59	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1	[more]
W9QHV2_9ROSA	2.4e-49	81.20	Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1	[more]
A0A0B0NJQ5_GOSAR	3.5e-48	80.34	Ribosome-recycling factor OS=Gossypium arboreum GN=F383_19391 PE=4 SV=1	[more]
A5B5P8_VITVI	4.6e-48	79.66	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040543 PE=4 SV=1	[more]
K7L1B3_SOYBN	6.0e-48	80.34	Uncharacterized protein OS=Glycine max GN=GLYMA_07G109700 PE=4 SV=1	[more]

BLAST of Cucsa.259790.4 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15351.1	1.0e-38	62.16	unknown protein	[more]

BLAST of Cucsa.259790.4 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431974\|ref\|XP_004133775.1\|	6.4e-59	100.00	PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus]	[more]
gi\|700201229\|gb\|KGN56362.1\|	6.4e-59	100.00	hypothetical protein Csa_3G117970 [Cucumis sativus]	[more]
gi\|659074783\|ref\|XP_008437793.1\|	1.3e-56	97.44	PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo]	[more]
gi\|694432402\|ref\|XP_009343559.1\|	1.3e-51	79.07	PREDICTED: uncharacterized protein LOC103935508 [Pyrus x bretschneideri]	[more]
gi\|694376200\|ref\|XP_009364606.1\|	1.7e-51	79.07	PREDICTED: uncharacterized protein LOC103954500 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.259790	Cucsa.259790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.259790.4	Cucsa.259790.4-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.259790.4.five_prime_UTR.1	Cucsa.259790.4.five_prime_UTR.1	five_prime_UTR
Cucsa.259790.4.five_prime_UTR.2	Cucsa.259790.4.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.259790.4.CDS.1	Cucsa.259790.4.CDS.1	CDS
Cucsa.259790.4.CDS.2	Cucsa.259790.4.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.259790.4.three_prime_UTR.1	Cucsa.259790.4.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 5..32 scor
None	No IPR available	PANTHER	PTHR21162	P53 AND DNA DAMAGE-REGULATED PROTEIN	coord: 87..117 score: 1.1E-31coord: 1..56 score: 1.1