Cucsa.251960.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCATGTGAGAGTAAATTTTTTTTTATAAATGAGGTCCAAGAAGAGAATTGTTCTTGCCATTGCCTTTTATCTCCCTAATAATCTTTCCTAAACTATCACTTTATACTCCAAATTAAACCCAAAAATTCTCCATAATGAGTCTTTGTGGAAAGCTGGAAAAGGATGTGCCAATTAGAGCTTCGGCTTCAAAGTTTCATGAAATGTTTCACAAGAAGCCTCATCATATCTGCAATTGCTCTACTGACAAAATACACGGCGTCGAACTACAAGAAGGGGAATGGGGCCAAGTTGGCTCCATCATTTGCTGGAAATATTTTCACGGTAGTTTATTTTACCACTACTTTTCATTTGTTTAATTAATAACTTGCGTATGAAATGAGTTTTCAAATGCTTAAAACTATATGTTTTTTTAGAGGGTAAACATAAAATAGCAAAGGAGATCGTTGAACACGTTGACGAAGAAAACAACTCAATCACTTTCAAAGTAATTGAAGGAGACCTTACTGAACACTACAAGGATTTTAGGTTTACAATCAAATGTATTCCAAAGGAGAAGGGAAGTGTGATTCATTGGGTCTTAGAATATGAGAAGTTGCATGACAAGATTCCAGATTCACATACTTTGCTGCAGTTTTGTGTTGACGTCTCTAAAGACATCGATAAACAACTTTCTGCAAATTGATGAACCCTAGCTAGCTAGCTAGCTAGTCATGTTGCTGTGACATGACATACAAGATTTCAGTACTCATCATTTCTCAGGTGTGTGTTGTTCGTTATATATAAATAATTTGGCTCTACTATGCTAAAATTGCCAATTCTCTATATTTATGTTTTAATATAAATATCTAAAGTCGTATAGGTGTGATATGTTTTGGATCTTCTGTTTTATGTGCTGTAATAAATTCTCAATATATATATATATATATGATAATATCCTACTCTTTCGAATGAACGTGAAATATAGAATAATATAAGCAATTTCTACGTATACAGTGGATTGCATCGAGACATCTTTATTGGGTGGACACATCCTTAGCATCATCGATCATCATTCTCGTTGAGAAAAATACATAAAGTATTTGGAGTACAAAAAGAGCTACAGTGAAGCTCAAATATCCAAAATTAAAAACATAAGCAATTAAACAAAAGCATTGATGTTTAATACAATAGAGTTAGTTGTATATCTTACAAACCTCATAGATCGTAAAAAGTTAATTATTTAGACGTTTAAAAAATTAATATTGTCAAAACAAGTTTTGGCCCATTAAGAAGGCAGACCATTTTATTTAGTGTTTATGTTAGAGATGTGTACATCCAACCCCGAAAATCGAATCATAAAAATGTTATCAAATTCAACAACATAACTTGCAACTTTTTTTTAAACATAAATAAAAAAAATTATCAATCATTTTTTTTTATGAAAAAACTTAAATATTCAACCATGGCGTGGTTAGGTTGAAAATTAGGTAACATAACAAAATAACAATAAATCAATCGCTAACGCAATAGATTTGGTCTTGGGTTGGTGTGGTTAATTATAATGTGAGCTTGGTTTTATAATGAAATTTTAGGTTATCTAAAATATACATGATGAAACTTTTTAATTACGCCGGATGTTACAACATTTCCAAAAACATCACAAATTACAAATTTTGGTAATCCAATTTGGTGCAATACCAGCTATGTCAGTAAATCATAATAGAACACAAAATAAAAGTTAAGCAATTACAATAATTATGCATCTTTTTATAAATAAACAACTATATATGCCGACAAATACAGCTATACACACACTTGAATAGCTTAACTCAAAGTACGATCACTTAGGTTTCCTCCAAGTGTATGAGATTCTAATCCTTCTTGATGAAAGTTAGACTCCCTTTCTCTAAGAACGTTTATTTTTCTACTTATAAATGAAGTAATTGATAATCTATGGATAAACACGCTTGTGTTTTAGCACAATCACAACACTAATATGCATCAAAATGGTCAACGTGTTGAAATTGATCAAAACCACAATATATATGGATAGCTTTGAGAAGATATTCAAGGACGGAGACAATAAAATCCAGAAGATCTTGCTGATAGATAAGGAAAAATAATATTTAGACTATAGTACTTAAAATCTCAATATTTAATTAATTCTAATTCCACGAAACAAACATTTCTAAATCAATTAATATCTCAAAATAACACTCAATGATTCCACGTAATGATTCTTATCTCTAAAATCCAAAAGTAGCAGCTGGCAGGTTACACTTACAAAATTTACTAAAGAGTTAGTATATATTTGATCGAAGTTGTGATAACTAAATGCTATAGGAATATGAGATATATTTAGAAGTTAACATCTAATCAAGATTGATTGTATTGGTTCAAAGGAGGAGTATTCAACTATTCACTAGAGATTAATTCTAAAGCTTTGAAATATCGTCGCAAAACTCAATAATGATGCTTAAATTATTAATATTAGATAAACTAGATAGGTTCTCGAAGATATTATAGTTTTTTTTATTAAAAGAGTATGTTTTAAATTTTAAATATCAACATGTAAATCATTGGTCAAAATTAGATTGATTTGTTTAATTAATGGCATTATCTTATAAACAAAATAGCCAAACTTGTAAAAAAATATGATAAAATTTAAAAAATGAAGTATACGTTGACAAGTGCTTGAAAAAAAGTATTTAGCTTAATTGAACCCATTAATTAGATTTGATTGAACAAATTCACAATCTTTGTAAAATTTATATTTCAATAGAAAGAGTTAGGAATTTTTCCTTTTAGTCTATCTTGTTGACAAACAACCCTTAATTGATTAATTGAGGAAATATAATAAACAAAATATCAATTTCATAGAAAGTGATGAATCAAATATCCTTCATTATTTTTCTTGATTGATTGAGTTGACCTGATTTGTTTAAATCTATTATTTAAGGGATTTGGTGATGAATCAAATCTCCATGATTTGATTTCTAATTAGTGAGTTGGAGGCCTAATTTATTGCCTCTGACTTCCACACTCCAATGCAAATAAAAAAAAAAAACAAATTTCATCTATTTAAATAGTTTTAAATTCATTCTTTTTCTTCTATCTGTTTTTTTTTTAAATATCTTAATTGTCTAAATCACTCAGCTACTGATTTGATCTGGCGTGATAATGAATGAGTAATTCATCTATTTTATAGGAGGTGTGGGTTTTCTTAATTTTTTTAATACGGAACTCTCAACTTGTCCTCTTAAGATATGATGTCTTTATTGAGTTCATGACTGAATACCCATTTGAGCTTAATGGACTTTGACACCGTGAACAAATTTCCAGTCTTTATGTATTTTTCTATTTCAATGATCAATAAAAGCAAAACTTGTCATCAACTAGAGATGAATTTGTCCTTTTAAACTATATTGGTTTGTGATCTATCTTGCTTGCAAACAACCCTCAGTTGAGGGAATATAATAAACAGATTATGAATTTCCTAAATTAGATACATAACTAAGAAAAGATATATATGGAAGACTTTTGGTGATCATTTGCTACAAGCTGTCATGACACTTATTTATTTATTTATTTTGTTATCTCTTTCTTCCCCTTAATTTGAGTTGTGTGTGTGTCATGTGAGAGTAGAAACTTCTCTATAAATGAGGTGCAAGAAGAGATGTTCTTGGCAGTGCCTTATCTCCCCCTAATCTTTCCTAAAATATCACTTTATACTCCAAATTATACCCCCAAAAATTCATCCTAATGGGTGATCTATATGGAAAGCTGGAAACGGATGTGCCAATTAAAGCTTCCGCTTCAATGTTTCATGAAATATTTCACAAGAAACCTCATCATATCTCCAATGCCTCTACTGACAAAATACACGGTGTCGACCTACATGAAGGCGAATGGGGCCAAGTTGGCTCCATCATTTGCTGGAAATATTTTCACGGTACTTCTTTTTACCACTCCTGGCCTTTTCGTTTGTTTAATTAATAACTTGCGTAAGAAATGAAACGATGTGTTTTTTTTTCTTTTTTGTAGATGGTAAAGCTAGAATAGCAAAGGAGATCATTGAACATGTTGATGAAGAAAACAACTCAATCACTTTCAAAGTAATTGAAGGAGACCTTACTGAACACTACAAGGATTTTAGGCTTACAATCCAATGTATTCCAAAGGAGAAAGGAAGTGTGATTCATTGGATCTTAGAATATGAGAAGTTGCATGACCAGATTCCAGATTCACATACTTTGCTGCAGTTTTGTGTTGAAGTCTCTCAAGACATCGATAGTCTGCTTTCTGATATTGATGAACCCTAGGTAGATAGTCATGTTGGCTGTGACATGACACACAAGATTTCAGTACTCATCATTTCTCAGGTGTGTGTTGTTCGTTATATATAAATAATTTGGCTTTTTACTATGCTAATTAAAATTGTCAATTCTCTATATTTAATCATTTATATATTCTCTTTGTATTGTGTGATATGTTTGGGATCTTCTTTTTTTATGTGTTGTAATAAAGAGCAGAAATAATATATTCTTCTCAATGTGTACTCTTTGGAATGTGAAAAATATATAATATAAGTAATTTCTATGTAA TGTCATGTGAGAGTAAATTTTTTTTTATAAATGAGGTCCAAGAAGAGAATTGTTCTTGCCATTGCCTTTTATCTCCCTAATAATCTTTCCTAAACTATCACTTTATACTCCAAATTAAACCCAAAAATTCTCCATAATGAGTCTTTGTGGAAAGCTGGAAAAGGATGTGCCAATTAGAGCTTCGGCTTCAAAGTTTCATGAAATGTTTCACAAGAAGCCTCATCATATCTGCAATTGCTCTACTGACAAAATACACGGCGTCGAACTACAAGAAGGGGAATGGGGCCAAGTTGGCTCCATCATTTGCTGGAAATATTTTCACGATGGTAAAGCTAGAATAGCAAAGGAGATCATTGAACATGTTGATGAAGAAAACAACTCAATCACTTTCAAAGTAATTGAAGGAGACCTTACTGAACACTACAAGGATTTTAGGCTTACAATCCAATGTATTCCAAAGGAGAAAGGAAGTGTGATTCATTGGATCTTAGAATATGAGAAGTTGCATGACCAGATTCCAGATTCACATACTTTGCTGCAGTTTTGTGTTGAAGTCTCTCAAGACATCGATAGTCTGCTTTCTGATATTGATGAACCCTAGGTAGATAGTCATGTTGGCTGTGACATGACACACAAGATTTCAGTACTCATCATTTCTCAGGTGTGTGTTGTTCGTTATATATAAATAATTTGGCTTTTTACTATGCTAATTAAAATTGTCAATTCTCTATATTTAATCATTTATATATTCTCTTTGTATTGTGTGATATGTTTGGGATCTTCTTTTTTTATGTGTTGTAATAAAGAGCAGAAATAATATATTCTTCTCAATGTGTACTCTTTGGAATGTGAAAAATATATAATATAAGTAATTTCTATGTAA ATGAGTCTTTGTGGAAAGCTGGAAAAGGATGTGCCAATTAGAGCTTCGGCTTCAAAGTTTCATGAAATGTTTCACAAGAAGCCTCATCATATCTGCAATTGCTCTACTGACAAAATACACGGCGTCGAACTACAAGAAGGGGAATGGGGCCAAGTTGGCTCCATCATTTGCTGGAAATATTTTCACGATGGTAAAGCTAGAATAGCAAAGGAGATCATTGAACATGTTGATGAAGAAAACAACTCAATCACTTTCAAAGTAATTGAAGGAGACCTTACTGAACACTACAAGGATTTTAGGCTTACAATCCAATGTATTCCAAAGGAGAAAGGAAGTGTGATTCATTGGATCTTAGAATATGAGAAGTTGCATGACCAGATTCCAGATTCACATACTTTGCTGCAGTTTTGTGTTGAAGTCTCTCAAGACATCGATAGTCTGCTTTCTGATATTGATGAACCCTAG MSLCGKLEKDVPIRASASKFHEMFHKKPHHICNCSTDKIHGVELQEGEWGQVGSIICWKYFHDGKARIAKEIIEHVDEENNSITFKVIEGDLTEHYKDFRLTIQCIPKEKGSVIHWILEYEKLHDQIPDSHTLLQFCVEVSQDIDSLLSDIDEP*
BLAST of Cucsa.251960.2 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 8.8e-46 Identity = 86/149 (57.72%), Postives = 106/149 (71.14%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 181.0 bits (458), Expect = 9.8e-45 Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-44 Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 1
HSP 2 Score: 175.6 bits (444), Expect = 4.1e-43 Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44 Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 1
HSP 2 Score: 165.2 bits (417), Expect = 5.5e-40 Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.0e-30 Identity = 62/146 (42.47%), Postives = 94/146 (64.38%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TrEMBL
Match: A0A0A0L9B6_CUCSA (Csf-2 protein OS=Cucumis sativus GN=Csa_3G172375 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 5.5e-79 Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TrEMBL
Match: Q9SXL8_CUCSA (Csf-2 protein OS=Cucumis sativus GN=Csf-2 PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.6e-78 Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TrEMBL
Match: A0A0A0L5I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171870 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.3e-56 Identity = 107/150 (71.33%), Postives = 127/150 (84.67%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TrEMBL
Match: A0A0A0L885_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171860 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.5e-49 Identity = 94/143 (65.73%), Postives = 112/143 (78.32%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TrEMBL
Match: Q9AXU0_PRUPE (Major latex-like protein OS=Prunus persica GN=PRUPE_ppa012742mg PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 7.3e-47 Identity = 88/147 (59.86%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43) HSP 1 Score: 184.5 bits (467), Expect = 5.0e-47 Identity = 86/149 (57.72%), Postives = 106/149 (71.14%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31) HSP 1 Score: 181.0 bits (458), Expect = 5.5e-46 Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TAIR10
Match: AT1G70830.1 (AT1G70830.1 MLP-like protein 28) HSP 1 Score: 179.5 bits (454), Expect = 1.6e-45 Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 1
HSP 2 Score: 175.6 bits (444), Expect = 2.3e-44 Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 179.1 bits (453), Expect = 2.1e-45 Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 1
HSP 2 Score: 165.2 bits (417), Expect = 3.1e-41 Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-36 Identity = 73/152 (48.03%), Postives = 100/152 (65.79%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. NCBI nr
Match: gi|778688513|ref|XP_011652767.1| (PREDICTED: MLP-like protein 28 [Cucumis sativus]) HSP 1 Score: 301.6 bits (771), Expect = 7.9e-79 Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. NCBI nr
Match: gi|778688513|ref|XP_011652767.1| (PREDICTED: MLP-like protein 28 [Cucumis sativus]) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-78 Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 1
HSP 2 Score: 301.6 bits (771), Expect = 7.9e-79 Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. NCBI nr
Match: gi|5762258|dbj|BAA83470.1| (Csf-2 [Cucumis sativus]) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-78 Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. NCBI nr
Match: gi|659077118|ref|XP_008439042.1| (PREDICTED: MLP-like protein 43 isoform X2 [Cucumis melo]) HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70 Identity = 129/148 (87.16%), Postives = 135/148 (91.22%), Query Frame = 1
BLAST of Cucsa.251960.2 vs. NCBI nr
Match: gi|659077114|ref|XP_008439040.1| (PREDICTED: MLP-like protein 43 [Cucumis melo]) HSP 1 Score: 235.0 bits (598), Expect = 9.1e-59 Identity = 107/151 (70.86%), Postives = 129/151 (85.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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