Cucsa.242280.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCACCACTCTGCATGCAGCCAGCCGCCATTTGCAATCACGCCAACCACTGAAGTTCCCAGAAACTCCGCGATATCGTTTTCTTTTTCAAAACCAATTCTCGTTTTCTATGCCACAATTTCATCCTTCCTTCTTTTTTCTCTCTAAGATTTTCTTTTCCTCTTCCGATTTTCCCGGATTCCTCTTCTTAACTTTTCCACCTGCCATTTCCTCGACGAGAAAAATTCGAGAAACCGCATAATACAGCGTTCGAATAGGTCGTTTTTTCTCCTTTCTATAGTTTTAATCTGCTTCATCTCCTTCCAGTTTGAGGTGGGTTTTATTGAATTCTGTAATGTTGGTGGTGTTTTTGCCCAATTTTTCGCATGAGTATTTGAATTTTCCCTTTGAATTTGATGTGTTTTAGGGTTTTCTGTAAAAAGTATTTACAAGATTAAAGATGAAATTCGGCGAGACGTTCATGGAGTATTTGCACGGTGATCGAGAATGGTTCTTGGATAAATGTTCGCATGTTGAGTATAAGCGGTTGAAGAAGGTTCTTAAGAGCTGTCGTACTTGCAGGCTCAATGATTCCTGCAGTAATGAATGTGAATGTAAATCTTGCCCTGGTAAGATTGTTAATACATTGTTTTCTTTTGATTTTTTAGCTGGTTTTCGATTCAGTCGTTGGACACTGGAATTGATTGAGAATGTTTCACTTTGTAGTATGCGATCAGTTGTTCTTTTCGGAGTTGATGAGGGAAGCCTCGGATATTGCTGGATGTTTCAACACAAGAGTTAGACATCTTCTTCATCTTCATGTTGCAGGAGGAATTGAGAGATACATGTCACGATTGGTTCATTGCTTCAAAACCGATCAAACCACCTTGATACAAGAAGGTCGAATGCTGATTGAATATGTTACAATGAATGCTATTGCTATCAGAAAGATTCTCAAGAAGTATGATAAGGTGAGATTCGGTCTAAATTCATATTTTAATTTGAAAATTTGTGGATTTGACATTGGAGTTTGTATGTATGTTTGTTTCAATTTAAGAACATAACTTTTGTTTTGTGTGTTTTAAATAATCAATTATAGGTACATAGCTCTGTAAATGGAAAAAACTTTAAGTTGAGAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCAAGGATGGAGATTATCCTTCAGGATTCTCCACTCACTTTTCCTTTAATGTGGATGCGGCACCGACAATGACGTTGATGCTTCCAGATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGTAAATTTTCTTCTCTTGGCTGTACGGATGAAAGTATTAGGAATTTATTTGATAATACATTGAATTGTGATGATGTTGCAGGAAACATTATTTGATCCATATGCTTTGGGTTGTGGACATCTCTTTTGCAAATCATGTGTTTGTTTAGCAGCTTCAGTGATGATTTGCGATGGACCAAAGGCTGCCAGCCCGGAATCTAAATGCCCAGTTTGTAGAGAGGTCTGTGTTTAGTATTTGAAGCAATCAGATTATTCTCCATGAGCTGTTAAGATATGAAAAGTTTGGAAAAAAGACAAATACAATTGAAAATTCAATCTCATGGACCAAATTGATGCAGTAATATTTTTGAAATACTTAAGACAAATGGAAATATCTCCAATTTTCTTTTTTGTCTTCGTGTATCTTTTCATCATCAAACTATGTTCTTGATAGTTTGCTTGCTTACTAGTCATCTTCCTTCCATTTTTTCCATTAAACTATGTTTTTTGTCTTGATATCTTTACAGAATTTGTTTGACATCGTGCTATTTTCATGGCCATTTGTCAACATCCTTCAGCTGTTTTTCCCCCCAAATGAAGAAACACTTGCATACCCATAATGAAGGTCATGGAAAAAAATTAAAACCAGGGAATAACAAATTTTCTTATTGCTTTAAAATGTTGCTGTTACCTCTTAGCAGGAATGCTAGGAATTTCATCTGACGCTTATAGTTTATCTGCTACAGACTTCCGTGTTTCTTCGGTATTTAGGAGTTTGTTTTCTTGCAATGCAATGTTTCTAATGTTCAATCTTTGGAAGGATACCTTTTCTTCTTGATTTTGTGTTGATCTTTTATGGTTGAAGTCTAAGTTCCGTTTCTTTTCTTCTATCTAATACTTAGATATGATTTAACAAGGTTCATCCCTTTTGAACATTCTATTTCCGATCACCATAACATATATGTGGTGAGATGTTCTGCTTTATGAAAAATTACAAGTTCAACTGATAACAAGAATTAAGTTATAATCGTAGTCCTATATGACCAACAGAGTCTCAAACTCTTTTGACTATTATTTGTTTCTAGTGCAGACCGGAGAGTATCCTAAAGCATTGCACATGGTTGAACTGGATATGCTATTGAAAAGAAGGTTTGTAAATTTAGAGCCTCTTTCCTTCCCATTCACTTTGTCTCTAGAAGTTGAAAACTATCAATTGCATCATTATGCTTTAAATAACACTCTGCTAATCTCAAAATGCTGAGTTCAACATGCTACTAAATCAATTTGAGTTGGTTTAATCATGATGCATAGCATTAACATTCCAGTTAACATTATTGAGTTTGGGTGCGTGCTATTGTTGGGAGGCTTCGGAGAGAGAAACAATAGAATTTTTAGATGGTGGATTTGTTCATATATTAGATTCAATATTTAGACATATTTGTATGCTTAGCTTCTTTTATAATGATAGTTATGTTCTATTTTCTTAGATTGTGGAGTCCTTTTTGTATGCTGCTCTCTTATTTTTGTTTGTTTGTGTATTCTTTCCTTTTTTTTTCCCTTAAGTTTTTAAAAGATATTTTATCAACAGTTCTATCATGATAGATACTCCTGTCTTGAACAAAAGGAAAAAAAAAAAAAAGGTTTCAGAGCACAAATCTCATCATTTAAACAAAAAAAAGACAAATTCAAATCTAATGTTTAAATTTACACTTTTAACTACAATTTTTACTATCAAAGTCATTTTAAGTCTTCTATAATCAACTCCCTCCCACCTACATGTTTATTGATTGAACAAGTGGTATACACAGGTGTAAAGATTACTGGAAGGAGAGGCTAGTGGAAGAACGTGCTAGAGTGTTGAAACAAACCAAAGATTTCTGGGATTCTCAGACTAGATATGTGGTTGGGTACTAAAAATTTACCCTACAGAAAACCCATCTTATAATCACTTTCATTTTTAACATAACAGCTTCTACGTTTGTCCTCAGAGGAGTTGGTGGCAGTTGTAGCCTATTTTACGCAAACACAAGAAAAAACAGGCTTTGTTTTTTTTCTTTTTGAATTTTGTCATTTTCTTTATCCACACACAGGTTCAGATTCGAAGAAGAATTTGTTTGACATGAATTTTGGATTGATAGCGAAAGAAAAGTAAGAAAAATAAAAATAAAACACCTTCTAGTCGTGCCTAAAAGTGTAATGATTACACGTGACATTAAGTAGTGGGCTTGTTTGGTGGTATTTGTGTGAGGATAAAGAATTCTTGTTTTCATATTTCCTTAGTTTATATTAATTAATAAAATGACTTGTGATATTGGTA CCCCACCACTCTGCATGCAGCCAGCCGCCATTTGCAATCACGCCAACCACTGAAGTTCCCAGAAACTCCGCGATATCGTTTTCTTTTTCAAAACCAATTCTCGTTTTCTATGCCACAATTTCATCCTTCCTTCTTTTTTCTCTCTAAGATTTTCTTTTCCTCTTCCGATTTTCCCGGATTCCTCTTCTTAACTTTTCCACCTGCCATTTCCTCGACGAGAAAAATTCGAGAAACCGCATAATACAGCGTTCGAATAGGTCGTTTTTTCTCCTTTCTATAGTTTTAATCTGCTTCATCTCCTTCCAGTTTGAGGGTTTTCTGTAAAAAGTATTTACAAGATTAAAGATGAAATTCGGCGAGACGTTCATGGAGTATTTGCACGGTGATCGAGAATGGTTCTTGGATAAATGTTCGCATGTTGAGTATAAGCGGTTGAAGAAGGTTCTTAAGAGCTGTCGTACTTGCAGGCTCAATGATTCCTGCAGTAATGAATGTGAATGTAAATCTTGCCCTGTATGCGATCAGTTGTTCTTTTCGGAGTTGATGAGGGAAGCCTCGGATATTGCTGGATGTTTCAACACAAGAGTTAGACATCTTCTTCATCTTCATGTTGCAGGAGGAATTGAGAGATACATGTCACGATTGGTTCATTGCTTCAAAACCGATCAAACCACCTTGATACAAGAAGGTCGAATGCTGATTGAATATGTTACAATGAATGCTATTGCTATCAGAAAGATTCTCAAGAAGTATGATAAGGTACATAGCTCTGTAAATGGAAAAAACTTTAAGTTGAGAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCAAGGATGGAGATTATCCTTCAGGATTCTCCACTCACTTTTCCTTTAATGTGGATGCGGCACCGACAATGACGTTGATGCTTCCAGATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAAACATTATTTGATCCATATGCTTTGGGTTGTGGACATCTCTTTTGCAAATCATGTGTTTGTTTAGCAGCTTCAGTGATGATTTGCGATGGACCAAAGGCTGCCAGCCCGGAATCTAAATGCCCAGTTTGTAGAGAGACCGGAGAGTATCCTAAAGCATTGCACATGGTTGAACTGGATATGCTATTGAAAAGAAGGTGTAAAGATTACTGGAAGGAGAGGCTAGTGGAAGAACGTGCTAGAGTGTTGAAACAAACCAAAGATTTCTGGGATTCTCAGACTAGATATGTGGTTGGGTACTAAAAATTTACCCTACAGAAAACCCATCTTATAATCACTTTCATTTTTAACATAACAGCTTCTACGTTTGTCCTCAGAGGAGTTGGTGGCAGTTGTAGCCTATTTTACGCAAACACAAGAAAAAACAGGCTTTGTTTTTTTTCTTTTTGAATTTTGTCATTTTCTTTATCCACACACAGGTTCAGATTCGAAGAAGAATTTGTTTGACATGAATTTTGGATTGATAGCGAAAGAAAAGTAAGAAAAATAAAAATAAAACACCTTCTAGTCGTGCCTAAAAGTGTAATGATTACACGTGACATTAAGTAGTGGGCTTGTTTGGTGGTATTTGTGTGAGGATAAAGAATTCTTGTTTTCATATTTCCTTAGTTTATATTAATTAATAAAATGACTTGTGATATTGGTA ATGAAATTCGGCGAGACGTTCATGGAGTATTTGCACGGTGATCGAGAATGGTTCTTGGATAAATGTTCGCATGTTGAGTATAAGCGGTTGAAGAAGGTTCTTAAGAGCTGTCGTACTTGCAGGCTCAATGATTCCTGCAGTAATGAATGTGAATGTAAATCTTGCCCTGTATGCGATCAGTTGTTCTTTTCGGAGTTGATGAGGGAAGCCTCGGATATTGCTGGATGTTTCAACACAAGAGTTAGACATCTTCTTCATCTTCATGTTGCAGGAGGAATTGAGAGATACATGTCACGATTGGTTCATTGCTTCAAAACCGATCAAACCACCTTGATACAAGAAGGTCGAATGCTGATTGAATATGTTACAATGAATGCTATTGCTATCAGAAAGATTCTCAAGAAGTATGATAAGGTACATAGCTCTGTAAATGGAAAAAACTTTAAGTTGAGAATGCGAGCTGAACATATGGAGCTTTTGCAATCCCCTTGGCTTATAGAATTGGGTGCTTTTTGTTTGAATTTTAAAGGATCCAAGGATGGAGATTATCCTTCAGGATTCTCCACTCACTTTTCCTTTAATGTGGATGCGGCACCGACAATGACGTTGATGCTTCCAGATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAAACATTATTTGATCCATATGCTTTGGGTTGTGGACATCTCTTTTGCAAATCATGTGTTTGTTTAGCAGCTTCAGTGATGATTTGCGATGGACCAAAGGCTGCCAGCCCGGAATCTAAATGCCCAGTTTGTAGAGAGACCGGAGAGTATCCTAAAGCATTGCACATGGTTGAACTGGATATGCTATTGAAAAGAAGGTGTAAAGATTACTGGAAGGAGAGGCTAGTGGAAGAACGTGCTAGAGTGTTGAAACAAACCAAAGATTTCTGGGATTCTCAGACTAGATATGTGGTTGGGTACTAA MKFGETFMEYLHGDREWFLDKCSHVEYKRLKKVLKSCRTCRLNDSCSNECECKSCPVCDQLFFSELMREASDIAGCFNTRVRHLLHLHVAGGIERYMSRLVHCFKTDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEHMELLQSPWLIELGAFCLNFKGSKDGDYPSGFSTHFSFNVDAAPTMTLMLPDSIKLEYDLTCPICLETLFDPYALGCGHLFCKSCVCLAASVMICDGPKAASPESKCPVCRETGEYPKALHMVELDMLLKRRCKDYWKERLVEERARVLKQTKDFWDSQTRYVVGY*
BLAST of Cucsa.242280.1 vs. Swiss-Prot
Match: BAH1L_ARATH (Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana GN=RF178 PE=2 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 5.1e-120 Identity = 205/335 (61.19%), Postives = 256/335 (76.42%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. Swiss-Prot
Match: BAHL1_ORYSI (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica GN=OsI_12825 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 9.3e-106 Identity = 190/339 (56.05%), Postives = 241/339 (71.09%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. Swiss-Prot
Match: BAHL1_ORYSJ (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0650900 PE=2 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 9.3e-106 Identity = 190/339 (56.05%), Postives = 241/339 (71.09%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. Swiss-Prot
Match: BAH1_ARATH (E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana GN=BAH1 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.2e-74 Identity = 152/341 (44.57%), Postives = 205/341 (60.12%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. Swiss-Prot
Match: BAHL2_ORYSI (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica GN=OsI_27296 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 4.1e-69 Identity = 138/324 (42.59%), Postives = 195/324 (60.19%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TrEMBL
Match: A0A0A0LBP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G790460 PE=4 SV=1) HSP 1 Score: 565.8 bits (1457), Expect = 3.3e-158 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TrEMBL
Match: A0A0B0PNQ0_GOSAR (Putative E3 ubiquitin-protein ligase BAH1-like protein OS=Gossypium arboreum GN=F383_07729 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 6.2e-133 Identity = 230/339 (67.85%), Postives = 272/339 (80.24%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TrEMBL
Match: A0A0D2R4Y3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G362900 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.4e-132 Identity = 230/339 (67.85%), Postives = 270/339 (79.65%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TrEMBL
Match: A0A061F5A3_THECC (SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related OS=Theobroma cacao GN=TCM_025064 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 5.8e-131 Identity = 226/337 (67.06%), Postives = 270/337 (80.12%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TrEMBL
Match: A0A067JDL6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03070 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 8.4e-130 Identity = 226/337 (67.06%), Postives = 273/337 (81.01%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TAIR10
Match: AT2G38920.1 (AT2G38920.1 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related) HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-121 Identity = 205/335 (61.19%), Postives = 256/335 (76.42%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TAIR10
Match: AT1G02860.1 (AT1G02860.1 SPX (SYG1/Pho81/XPR1) domain-containing protein) HSP 1 Score: 279.6 bits (714), Expect = 2.4e-75 Identity = 152/341 (44.57%), Postives = 205/341 (60.12%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TAIR10
Match: AT1G04020.1 (AT1G04020.1 breast cancer associated RING 1) HSP 1 Score: 52.4 bits (124), Expect = 6.1e-07 Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. TAIR10
Match: AT3G27330.1 (AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein) HSP 1 Score: 50.1 bits (118), Expect = 3.0e-06 Identity = 26/65 (40.00%), Postives = 33/65 (50.77%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. NCBI nr
Match: gi|778684598|ref|XP_004136542.2| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus]) HSP 1 Score: 678.3 bits (1749), Expect = 6.5e-192 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. NCBI nr
Match: gi|659084624|ref|XP_008442986.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo]) HSP 1 Score: 651.0 bits (1678), Expect = 1.1e-183 Identity = 307/321 (95.64%), Postives = 314/321 (97.82%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. NCBI nr
Match: gi|659084620|ref|XP_008442983.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo]) HSP 1 Score: 634.4 bits (1635), Expect = 1.1e-178 Identity = 307/353 (86.97%), Postives = 314/353 (88.95%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. NCBI nr
Match: gi|700204120|gb|KGN59253.1| (hypothetical protein Csa_3G790460 [Cucumis sativus]) HSP 1 Score: 565.8 bits (1457), Expect = 4.7e-158 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.242280.1 vs. NCBI nr
Match: gi|659084626|ref|XP_008442987.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X3 [Cucumis melo]) HSP 1 Score: 543.1 bits (1398), Expect = 3.2e-151 Identity = 255/267 (95.51%), Postives = 262/267 (98.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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